Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a000981m |
Family | CBM22 |
Protein Properties | Length: 924 Molecular Weight: 102491 Isoelectric Point: 5.8518 |
Chromosome | Chromosome/Scaffold: 59 Start: 1088502 End: 1093035 |
Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM22 | 32 | 171 | 1.4e-30 |
NIILNHDFSNGLQSWNPNNCDGFVVSSEGNSNYPLPAKLSGPRFAVITNRKESWQGLEQDITHRVSVASTYSVCALVAISAAPQSGSHVQLTLKVENQDS SVSYIFIGKTSASTEHWGKIEGTFSLSATPKRATFYLEGP | |||
CBM22 | 208 | 344 | 2.1e-33 |
NIIQNSRFDDGLNNWSGRGCKIVLNNSMSDGKILPISGKFFASTANRTQNWNGIQQEITGRVQRKLAYEVVATVRIFGNNVTSANVRITLWVQSADLREQ YIGIASVQATDKDWVQLQGKFLINGSPSRIIIYFEGP | |||
CBM22 | 379 | 519 | 1.3004e-42 |
NIIANSNLNDGTEGWFTLGNCTLSVGHGSPHILPPMAADSLGPHEPLNGRYILVTNRTQTWMGPAQTITDKVKLYLTYQVSAWVRIGTGATRPQGVNVAL GVDSQWVNGGQIEINDDKWHEIGGSFRIEKQPAKVIVYVQG | |||
GH10 | 578 | 858 | 0 |
QTQNGFPFGSCINRSNIDNEDFVDFFTKNFNWSVFGNELKWYWTEPQQNNFNYKDADEMLTFCEAHNIQLRGHCIFWEVESTVQSWLRALTKPDLATAVQ NRLTGLLTRYKGRFKHYDVNNEMLHGSFYQDRLGKDTRVNMFKTASQVDPTPALFVNDYHVEDGCDSKSSSEKYTQQILDLRARGAPVGGVGIQGHIDSP VGPIVCSALDKLGILGLPIWFTELDVSSENEFVRGDDLEVMLREAFAHPAVEGVVLWGFWEMFMSRDNAHLVNAEGEVNEA |
Full Sequence |
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Protein Sequence Length: 924 Download |
MEKTSSSNVN GNFLSEKSNE ELKDSMSRPV TNIILNHDFS NGLQSWNPNN CDGFVVSSEG 60 NSNYPLPAKL SGPRFAVITN RKESWQGLEQ DITHRVSVAS TYSVCALVAI SAAPQSGSHV 120 QLTLKVENQD SSVSYIFIGK TSASTEHWGK IEGTFSLSAT PKRATFYLEG PSPGVDLLIR 180 SVVVSCPGST KFDSPNTRSL CDEDGNENII QNSRFDDGLN NWSGRGCKIV LNNSMSDGKI 240 LPISGKFFAS TANRTQNWNG IQQEITGRVQ RKLAYEVVAT VRIFGNNVTS ANVRITLWVQ 300 SADLREQYIG IASVQATDKD WVQLQGKFLI NGSPSRIIIY FEGPPPGTDI LLDNLVVKHA 360 AKAPPPRPPA IENAAYGVNI IANSNLNDGT EGWFTLGNCT LSVGHGSPHI LPPMAADSLG 420 PHEPLNGRYI LVTNRTQTWM GPAQTITDKV KLYLTYQVSA WVRIGTGATR PQGVNVALGV 480 DSQWVNGGQI EINDDKWHEI GGSFRIEKQP AKVIVYVQGA DAGVDLMVAG LQIFPVDRHA 540 RFRELRKRTD KIRKRDIILN LNTSDSFPLV GTFLKIEQTQ NGFPFGSCIN RSNIDNEDFV 600 DFFTKNFNWS VFGNELKWYW TEPQQNNFNY KDADEMLTFC EAHNIQLRGH CIFWEVESTV 660 QSWLRALTKP DLATAVQNRL TGLLTRYKGR FKHYDVNNEM LHGSFYQDRL GKDTRVNMFK 720 TASQVDPTPA LFVNDYHVED GCDSKSSSEK YTQQILDLRA RGAPVGGVGI QGHIDSPVGP 780 IVCSALDKLG ILGLPIWFTE LDVSSENEFV RGDDLEVMLR EAFAHPAVEG VVLWGFWEMF 840 MSRDNAHLVN AEGEVNEAGK RYLALKEEWL SRACGCVDGE GQFEFRGFHG SYEVEVVTIF 900 GKKLTRKFVV DPGEEPIEIS TDL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 4.0e-16 | 32 | 173 | 144 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
pfam02018 | CBM_4_9 | 3.0e-18 | 208 | 348 | 145 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 4.0e-36 | 566 | 836 | 293 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 5.0e-75 | 583 | 866 | 304 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 4.0e-76 | 616 | 861 | 267 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33301.1 | 0 | 5 | 923 | 3 | 915 | putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] |
RefSeq | XP_002283550.1 | 0 | 14 | 923 | 76 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301133.1 | 0 | 19 | 923 | 151 | 1049 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 32 | 528 | 2 | 479 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 207 | 533 | 1 | 314 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xyz_B | 7e-32 | 569 | 840 | 23 | 311 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 1xyz_A | 7e-32 | 569 | 840 | 23 | 311 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 1i1x_A | 8e-29 | 585 | 835 | 18 | 268 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 1i1w_A | 8e-29 | 585 | 835 | 18 | 268 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2bnj_A | 2e-28 | 585 | 835 | 18 | 268 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR184067 | 268 | 585 | 852 | 0 |
EB442796 | 298 | 406 | 703 | 0 |
EX570690 | 296 | 629 | 924 | 0 |
EB442796 | 116 | 242 | 357 | 0.000000006 |
EB442796 | 112 | 70 | 179 | 0.000000007 |
Sequence Alignments (This image is cropped. Click for full image.) |
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