y
Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna12964.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 594 Molecular Weight: 66047.8 Isoelectric Point: 9.2805 |
Chromosome | Chromosome/Scaffold: 1 Start: 6646941 End: 6648948 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 279 | 573 | 0 |
NVTVAKDGSGNYQSISQALSAMPEKYEGRYIIYVKEGVYNESVTVTKKMPNVTIYGDGSQKSIITGNKNSADGVKMFQTASFVALGEGLIAKSMGFRNTA GRDKQQAVAARVLADRAVFLNCRFEGYQSTLFVQAHRQFYKSSVVSGTIDFIFGDAAAIFQNCLIYIRKPQENHSNTVTAQGRTDKRETTGIVLHKCQIL PEKEFESEKSQFKSYLGRPWKEYSRTIVMESTIEDVIDQQGWYEMDGDFGKKTLFYGEYNNNGDSSKTDNRVTWPGFKVLNKDEAMQFTVGPFLK |
Full Sequence |
---|
Protein Sequence Length: 594 Download |
MAFQDFDQIT ERRKTENARK FKKRILIAVV AVILLIGIIV GAIFIVNKLK THEATKKDSK 60 PASPPPKRPD SDNNSTDDKP STSSKLVEQM CGSTDYKDKC KEVFSKKKDP ISKPREVIKA 120 IISGASDEAK SAFSKASEVS FDKEEEKKAF EDCKTLFDDA KEELEQSVYQ VGNTTSSGKM 180 RIGLLNSWLS AVISYGQTCI DGFPDGDGKS KITKTLEATK ELTSNSLAMI SLLSEVPGSK 240 SSSGSSRRLL AQDKNGFPSW LTYDERRVLK KNDEMPTPNV TVAKDGSGNY QSISQALSAM 300 PEKYEGRYII YVKEGVYNES VTVTKKMPNV TIYGDGSQKS IITGNKNSAD GVKMFQTASF 360 VALGEGLIAK SMGFRNTAGR DKQQAVAARV LADRAVFLNC RFEGYQSTLF VQAHRQFYKS 420 SVVSGTIDFI FGDAAAIFQN CLIYIRKPQE NHSNTVTAQG RTDKRETTGI VLHKCQILPE 480 KEFESEKSQF KSYLGRPWKE YSRTIVMEST IEDVIDQQGW YEMDGDFGKK TLFYGEYNNN 540 GDSSKTDNRV TWPGFKVLNK DEAMQFTVGP FLKGNAWLKN NNGVPVRFGL FDN* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02217 | PLN02217 | 2.0e-124 | 73 | 591 | 530 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 1.0e-125 | 73 | 578 | 527 | + pectinesterase | ||
PLN02468 | PLN02468 | 5.0e-129 | 74 | 590 | 525 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 3.0e-155 | 279 | 575 | 298 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 1 | 591 | 610 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 278 | 590 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 279 | 592 | 4 | 317 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2nt9_B | 3e-18 | 277 | 525 | 3 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2nt9_A | 3e-18 | 277 | 525 | 3 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2nt6_B | 3e-18 | 277 | 525 | 3 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |