Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna20639.1-v1.0-hybrid |
Family | GH1 |
Protein Properties | Length: 1525 Molecular Weight: 173486 Isoelectric Point: 6.7105 |
Chromosome | Chromosome/Scaffold: 3 Start: 30156250 End: 30171333 |
Description | beta glucosidase 13 |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH1 | 42 | 488 | 0 |
RTSFPEGFVFGTASAAYQYEGAAKEGGRGPSIWDTYTHEHPERITDGSNGDVANDQYHRYKEDVRIMKDMNLDAYRFSISWSRLLPNGKLSGGVNKEGVK YYNNLINELLSKGLQPYVTLFHWDLPQTLEDEYGGFLSPNIVNHFRDFSELCFKEFGDRVKYWITLNEPWTYSNGGYALGSLAPGRCSAWQQLNCTGGDS STEPYLVAHNLLLSHAAAVKLYRQKYQAYQKGVIGITIVSHWFIPISDATHHKNAALRTLDFMFGWFMDPLTNGDYPHSMRSLVGNRLPKFTKEQSKLLI GSFDFLGLNYYTTYYASYTPQNNSLNASYVTDARSTQSFALNGVPIGPQAASSWLYVYPKGLRDLLLYTKTKYNDPLIYITENGIDEFNDPKLSLEEALF DNQRVDYYFRHLYYLQKAIEDGVKVKGYFAWSLLDNFEWASGYTVRF | |||
GH1 | 553 | 1027 | 0 |
RTSFPAGFIFGTASSSYQYEGAAQDGGRGPSIWDTYTHRYPDKIKDGSNGDVANDEYHRYKEDVGIMKNMGLDAYRFSISWSRLLPNGKLSGGVNKKGVK YYNNLINELLRNGIKPFVTLFHWDLPQTLEDEYGGFLSPHIVNHFRDYAELCYKEFGDRVKHWITFNEPYSYSAGGYAAAILAPGRCSDWQQLNCTGGDS GTEPYLVAHHQLLAHAAAVKLYRQKYQSSQKGLIGITLVSNWYVPVSEAKHHKNAALRALDYMLGWFMDPLTNGDYPHSMRSLVGNRLPKFTKEQSKLLI GSFDFLGLNYYTANYAAYAPQHNSVNASYLTDARASLSSVLNGIPIGPKAASDWLYVYPRGIRDLLLYTKTKYNDPLIYITENGIDEYNDPQLSLEEALN DTQRIDYYYRHLYYLQRAIKDGVNVKGYFAWSLLDNFEWNSGYTVRFGINYVDYKNGQTRHPKLSAHWFKGFLKK | |||
GH1 | 1049 | 1522 | 0 |
RSTFPAGFIFGTASSAYQYEGAAKEDGRGPSIWDTYTHTFPDKIKDGSNGDVAIDAYHRYKEDVGIMKDMGFDAYRFSISWSRLLPNGTLSGGVNKEGIK YYNNLINELLANGLKPFVTLFHWDLPQALEDAYGGFLSPQIVDHFQDYAELCFKEFGDRVKDWITLNEPWSYARGGYVIGTFAPCRCSDWQNLNCTGGDS GTEPYLASHYQLLAHAAAVKSYKEKYQAEQKGVIGITILSHWFVPFSDAKHDKEAALRALDFMFGWYMDPLTYGEYPHSMRSLVGDRLPEFTKEQSEMLK GSFDFLGLNYYTANYATYAPELKNAANPSYLTDAIAILSTERNGIPIGPQSASDWLYVYPEGIRELLLYTKEKYNDPLIYITENGRDEHNDPKLTLEEAL ADTHRIDFYYQHLHYLHEAIKDGVNVKGYFAWSLFDNFEWNMGYSVRFGINYVDYNDGLKRYPKLSAHWFKNFL |
Full Sequence |
---|
Protein Sequence Length: 1525 Download |
MAMQRFLFLG IVLLLVAGFR LTNSEALSPS RTPIYDTAFL NRTSFPEGFV FGTASAAYQY 60 EGAAKEGGRG PSIWDTYTHE HPERITDGSN GDVANDQYHR YKEDVRIMKD MNLDAYRFSI 120 SWSRLLPNGK LSGGVNKEGV KYYNNLINEL LSKGLQPYVT LFHWDLPQTL EDEYGGFLSP 180 NIVNHFRDFS ELCFKEFGDR VKYWITLNEP WTYSNGGYAL GSLAPGRCSA WQQLNCTGGD 240 SSTEPYLVAH NLLLSHAAAV KLYRQKYQAY QKGVIGITIV SHWFIPISDA THHKNAALRT 300 LDFMFGWFMD PLTNGDYPHS MRSLVGNRLP KFTKEQSKLL IGSFDFLGLN YYTTYYASYT 360 PQNNSLNASY VTDARSTQSF ALNGVPIGPQ AASSWLYVYP KGLRDLLLYT KTKYNDPLIY 420 ITENGIDEFN DPKLSLEEAL FDNQRVDYYF RHLYYLQKAI EDGVKVKGYF AWSLLDNFEW 480 ASGYTVRFER TVAFPLHALL HMPSSWPPEP LAERTRLGSL LPAIVLLLLG FGLRNGKASD 540 TPPAHYDTAF LNRTSFPAGF IFGTASSSYQ YEGAAQDGGR GPSIWDTYTH RYPDKIKDGS 600 NGDVANDEYH RYKEDVGIMK NMGLDAYRFS ISWSRLLPNG KLSGGVNKKG VKYYNNLINE 660 LLRNGIKPFV TLFHWDLPQT LEDEYGGFLS PHIVNHFRDY AELCYKEFGD RVKHWITFNE 720 PYSYSAGGYA AAILAPGRCS DWQQLNCTGG DSGTEPYLVA HHQLLAHAAA VKLYRQKYQS 780 SQKGLIGITL VSNWYVPVSE AKHHKNAALR ALDYMLGWFM DPLTNGDYPH SMRSLVGNRL 840 PKFTKEQSKL LIGSFDFLGL NYYTANYAAY APQHNSVNAS YLTDARASLS SVLNGIPIGP 900 KAASDWLYVY PRGIRDLLLY TKTKYNDPLI YITENGIDEY NDPQLSLEEA LNDTQRIDYY 960 YRHLYYLQRA IKDGVNVKGY FAWSLLDNFE WNSGYTVRFG INYVDYKNGQ TRHPKLSAHW 1020 FKGFLKKTYG LATSIATSPS HYDVTAINRS TFPAGFIFGT ASSAYQYEGA AKEDGRGPSI 1080 WDTYTHTFPD KIKDGSNGDV AIDAYHRYKE DVGIMKDMGF DAYRFSISWS RLLPNGTLSG 1140 GVNKEGIKYY NNLINELLAN GLKPFVTLFH WDLPQALEDA YGGFLSPQIV DHFQDYAELC 1200 FKEFGDRVKD WITLNEPWSY ARGGYVIGTF APCRCSDWQN LNCTGGDSGT EPYLASHYQL 1260 LAHAAAVKSY KEKYQAEQKG VIGITILSHW FVPFSDAKHD KEAALRALDF MFGWYMDPLT 1320 YGEYPHSMRS LVGDRLPEFT KEQSEMLKGS FDFLGLNYYT ANYATYAPEL KNAANPSYLT 1380 DAIAILSTER NGIPIGPQSA SDWLYVYPEG IRELLLYTKE KYNDPLIYIT ENGRDEHNDP 1440 KLTLEEALAD THRIDFYYQH LHYLHEAIKD GVNVKGYFAW SLFDNFEWNM GYSVRFGINY 1500 VDYNDGLKRY PKLSAHWFKN FLGN* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03356 | BGL | 2.0e-142 | 557 | 1021 | 466 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 2.0e-158 | 555 | 1028 | 477 | + Glycosyl hydrolase family 1. | ||
TIGR03356 | BGL | 9.0e-161 | 1053 | 1518 | 469 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 9.0e-169 | 44 | 488 | 448 | + Glycosyl hydrolase family 1. | ||
pfam00232 | Glyco_hydro_1 | 4.0e-180 | 1051 | 1521 | 477 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 551 | 1027 | 29 | 505 | A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors B59 |
PDB | 3ptq_B | 0 | 1036 | 1522 | 15 | 503 | A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors B59 |
PDB | 3ptq_B | 0 | 40 | 488 | 29 | 477 | A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors B59 |
PDB | 3ptq_A | 0 | 551 | 1027 | 29 | 505 | A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors B59 |
PDB | 3ptq_A | 0 | 1036 | 1522 | 15 | 503 | A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors B59 |