Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna31065.1-v1.0-hybrid |
Family | GH17 |
Protein Properties | Length: 373 Molecular Weight: 41056.7 Isoelectric Point: 6.7215 |
Chromosome | Chromosome/Scaffold: 1 Start: 2355809 End: 2357867 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 33 | 352 | 0 |
GINYGRIADNIPSPDKVATLLRAAKIKNVRIYDADHSVLKAFSGTGLDLVVGLPNGYVKDMSANQDHALDWVKENVQAFLPDTHIRGIAVGNEVLGGGDL ELWAALLGAVKNIYNATKLLKLDDVVQITTAHSQAVFSNSYPPSSCIFKDNVKQQYMKPLLQFFSEIGSPFCLNAYPFLDYMGDPENIDINYALFQKTQG IYDPKNDLHYDNMLDAQIDAAYSALEDAGLKKMEVIITETGWASRGDDNEAAATAENARTYNYNLRKRLAKKKGTPLRPHFVVKAYIFAIFNENLKPGPT SERNFGLFKPDGTISYDIGF |
Full Sequence |
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Protein Sequence Length: 373 Download |
MRIKSFCFFV QVFLVFFSLI ATVTVQAFTG AYGINYGRIA DNIPSPDKVA TLLRAAKIKN 60 VRIYDADHSV LKAFSGTGLD LVVGLPNGYV KDMSANQDHA LDWVKENVQA FLPDTHIRGI 120 AVGNEVLGGG DLELWAALLG AVKNIYNATK LLKLDDVVQI TTAHSQAVFS NSYPPSSCIF 180 KDNVKQQYMK PLLQFFSEIG SPFCLNAYPF LDYMGDPENI DINYALFQKT QGIYDPKNDL 240 HYDNMLDAQI DAAYSALEDA GLKKMEVIIT ETGWASRGDD NEAAATAENA RTYNYNLRKR 300 LAKKKGTPLR PHFVVKAYIF AIFNENLKPG PTSERNFGLF KPDGTISYDI GFHGLVSSSA 360 DSSHSSLKVL GS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.001 | 18 | 171 | 167 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-85 | 33 | 352 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 33 | 352 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 33 | 352 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 33 | 352 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 33 | 352 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 33 | 352 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |