| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna32087.1-v1.0-hybrid |
| Family | CBM49 |
| Protein Properties | Length: 725 Molecular Weight: 79413.1 Isoelectric Point: 8.8421 |
| Chromosome | Chromosome/Scaffold: 5 Start: 2725023 End: 2731420 |
| Description | glycosyl hydrolase 9C2 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM49 | 632 | 709 | 2.69999e-40 |
| IAIAQKVTSSWVSKGVTYYRYSTTVTNKSGKTLNNLKLTISKLYGPLWGLTKTGDSYVFPSWLNSLPAGKSLEFVYIH | |||
| GH9 | 131 | 592 | 0 |
| DYGAALSKSILFFEAQRSGVLPHNQRVTWRSHSGLYDGKASGVNLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMASSGELGHALDAVKWGTDYF IKAHPEPNVLYGEVGDGNTDHYCWQRPEDMTTDRRAYKISPSNPGSDLAGETAAAMAAASIVFRRTNPAYSRELLQHAYQLFDFADKYRGKYDSSITVAQ KYYRSISGYNDELLWAAAWLYQASNNEYYLNYLAVNGDSMGGTGWGMTEFGWDVKYSGVQTLVAKFLMQGKAGKHAAVFQKYTAKAEYFMCSCLGKGSRN AQKTPGGLLFRQRWNNMQFVTSASFLATVYSDYLTSSRRTLKCASGNVAPSELLSFAKSQVDYILGDNPRATSYMVGYGNNYPQQVHHRGSSIVSIKKDS SFVSCRGGYATWFSRKASDPNLLTGAIVGGPDAYDNFADQRDNYEQTEPATYNNAPLIGILA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 725 Download |
| MELSVVCRVV GYSNPGYRSN FLLSYLCVTL TRCKCVTTPP ASMSLPSVVF FYVYAPLLNP 60 GVLQFVFVFH GDEYGLTLFS LPVDLSEFLA DKPSDIASID QCFSMEKFVR LVSLAPLLLL 120 LCFPLALAGH DYGAALSKSI LFFEAQRSGV LPHNQRVTWR SHSGLYDGKA SGVNLVGGYY 180 DAGDNVKFGL PMAFTVTMMS WSIIEYGKQM ASSGELGHAL DAVKWGTDYF IKAHPEPNVL 240 YGEVGDGNTD HYCWQRPEDM TTDRRAYKIS PSNPGSDLAG ETAAAMAAAS IVFRRTNPAY 300 SRELLQHAYQ LFDFADKYRG KYDSSITVAQ KYYRSISGYN DELLWAAAWL YQASNNEYYL 360 NYLAVNGDSM GGTGWGMTEF GWDVKYSGVQ TLVAKFLMQG KAGKHAAVFQ KYTAKAEYFM 420 CSCLGKGSRN AQKTPGGLLF RQRWNNMQFV TSASFLATVY SDYLTSSRRT LKCASGNVAP 480 SELLSFAKSQ VDYILGDNPR ATSYMVGYGN NYPQQVHHRG SSIVSIKKDS SFVSCRGGYA 540 TWFSRKASDP NLLTGAIVGG PDAYDNFADQ RDNYEQTEPA TYNNAPLIGI LARLGGGQSS 600 YNQLLPVVTS QPKQTPVPKL TPAAPASTSG PIAIAQKVTS SWVSKGVTYY RYSTTVTNKS 660 GKTLNNLKLT ISKLYGPLWG LTKTGDSYVF PSWLNSLPAG KSLEFVYIHA ASAANVLVSS 720 YSLA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02171 | PLN02171 | 0 | 129 | 724 | 602 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 129 | 721 | 596 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 129 | 610 | 486 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 131 | 592 | 464 | + Glycosyl hydrolase family 9. | ||
| PLN00119 | PLN00119 | 0 | 131 | 594 | 464 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 130 | 594 | 3 | 428 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
| PDB | 1ksc_A | 0 | 130 | 594 | 3 | 428 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
| PDB | 1ks8_A | 0 | 130 | 594 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 124 | 594 | 18 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 131 | 594 | 5 | 440 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
