Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa001074m |
Family | CBM53 |
Protein Properties | Length: 919 Molecular Weight: 105472 Isoelectric Point: 6.3424 |
Chromosome | Chromosome/Scaffold: 4 Start: 935616 End: 943272 |
Description | starch synthase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM53 | 35 | 118 | 2e-30 |
QDIDIFLNRSLSTLSNEPEILIMGAFNDWRWKSFTFRLNKTQLKGDWWSCQFHVPKESYKIDFVFFNGQNIYDNNDEKDFCIAV | |||
CBM53 | 372 | 460 | 1.8e-33 |
SMATVFYNPASTVLNGKPEVWFRGSFNRWTHRKGPLPPQKMLPAETGSHVKTTVKVPLDAYVMDFVFSEKKDDDGLFDNKNGMDYHIPV | |||
CBM53 | 211 | 299 | 3e-34 |
LVKLYYNRSSGPLAHAKEIWIHGGHNNWKDGLSIVERLVSSEEKDGDWWYANVVVPDQAVVLDWVFADGPPQNAVLYDNNHRHDFHSIV | |||
GT5 | 471 | 914 | 0 |
HIVHISVEMAPIAKVGGLGDVVTSLSRAVQDLNHHVDIILPKYDCLNLSNVKGFQYNRSYSWGGTEIKVWFGKVEGVPVYFLEPQNRFFYTGCIYGCKND AERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLYKDHYMHYGLSKARVVFTIHNLEFGAHFIGKAVGYSDKATTVSDSYAKEVAGNPAIAPHLYK FHGIINGIDQDIWDPYNDKFIPISYTSENVVEGKQAAKEALQQRLGLKTADLPVVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFV NLANQLHSSYGDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGSIPVVRKTGGLYDTVFDVDHDKERADAQGVEPNGFSFDGPDAAGV DYALNRAISAWYDGRDWFNSLCKTVMEQDWSWNKPALDYMELYH |
Full Sequence |
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Protein Sequence Length: 919 Download |
MEEKLRKEEI VRLAEENFLR GNKIFVYPQV VKPDQDIDIF LNRSLSTLSN EPEILIMGAF 60 NDWRWKSFTF RLNKTQLKGD WWSCQFHVPK ESYKIDFVFF NGQNIYDNND EKDFCIAVEG 120 GMDLFAFEDF LLDEKRKELE KLAKEQAERE RQAEEQRQIE AEKAASEADR AEARAEIERR 180 RKMVQELIKK GVRSVENVWY IEPSEFKGED LVKLYYNRSS GPLAHAKEIW IHGGHNNWKD 240 GLSIVERLVS SEEKDGDWWY ANVVVPDQAV VLDWVFADGP PQNAVLYDNN HRHDFHSIVP 300 KSIPEELYWV EEEHKIYRKL QEERRLREEA IRAKAERTAR MKAEMKERTL KRFLLSQKHI 360 VYTEPLDVQA GSMATVFYNP ASTVLNGKPE VWFRGSFNRW THRKGPLPPQ KMLPAETGSH 420 VKTTVKVPLD AYVMDFVFSE KKDDDGLFDN KNGMDYHIPV FGGVLKESPM HIVHISVEMA 480 PIAKVGGLGD VVTSLSRAVQ DLNHHVDIIL PKYDCLNLSN VKGFQYNRSY SWGGTEIKVW 540 FGKVEGVPVY FLEPQNRFFY TGCIYGCKND AERFGFFCHA ALEFLLQSGF HPDIIHCHDW 600 SSAPVAWLYK DHYMHYGLSK ARVVFTIHNL EFGAHFIGKA VGYSDKATTV SDSYAKEVAG 660 NPAIAPHLYK FHGIINGIDQ DIWDPYNDKF IPISYTSENV VEGKQAAKEA LQQRLGLKTA 720 DLPVVGIITR LTHQKGIHLI KHAIWRTLER NGQVVLLGSA PDPRIQNDFV NLANQLHSSY 780 GDRARLCLTY DEPLSHLIYA GADFILVPSI FEPCGLTQLI AMRYGSIPVV RKTGGLYDTV 840 FDVDHDKERA DAQGVEPNGF SFDGPDAAGV DYALNRAISA WYDGRDWFNS LCKTVMEQDW 900 SWNKPALDYM ELYHAARK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02316 | PLN02316 | 3.0e-6 | 2 | 122 | 141 | + synthase/transferase | ||
TIGR02095 | glgA | 4.0e-158 | 470 | 916 | 489 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PRK00654 | glgA | 5.0e-170 | 470 | 918 | 487 | + glycogen synthase; Provisional | ||
PLN02316 | PLN02316 | 0 | 3 | 918 | 916 | + synthase/transferase | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 471 | 914 | 489 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
GO:2001070 | starch binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002269011.1 | 0 | 1 | 918 | 224 | 1140 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305571.1 | 0 | 2 | 918 | 102 | 1017 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002305571.1 | 0.00000000000001 | 116 | 467 | 47 | 406 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518476.1 | 0 | 1 | 918 | 151 | 1058 | starch synthase, putative [Ricinus communis] |
RefSeq | XP_002518476.1 | 0.00000000000004 | 143 | 467 | 109 | 447 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d1j_A | 0 | 470 | 914 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 470 | 914 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 470 | 914 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4t_A | 0 | 470 | 914 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2qzs_A | 0 | 470 | 914 | 1 | 474 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778003 | 705 | 1 | 705 | 0 |
HO794758 | 578 | 342 | 918 | 0 |
HO651392 | 413 | 507 | 919 | 0 |
HO794758 | 103 | 24 | 122 | 0.094 |
HO794758 | 115 | 194 | 306 | 0.84 |
Sequence Alignments (This image is cropped. Click for full image.) |
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