LOCUS       GL636894                6445 bp    DNA     linear   CON 13-MAR-2015
DEFINITION  Acinetobacter baumannii A118 genomic scaffold scaffold1213, whole
            genome shotgun sequence.
ACCESSION   GL636894
VERSION     GL636894.1
DBLINK      BioProject: PRJNA60111
            BioSample: SAMN02469413
KEYWORDS    WGS.
SOURCE      Acinetobacter baumannii A118
  ORGANISM  Acinetobacter baumannii A118
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii
            complex.
REFERENCE   1  (bases 1 to 6445)
  AUTHORS   Ramirez,M.S., Adams,M.D., Bonomo,R.A., Centron,D. and Tolmasky,M.E.
  TITLE     Genomic Analysis of Acinetobacter baumannii A118 by Comparison of
            Optical Maps: Identification of Structures Related to Its
            Susceptibility Phenotype
  JOURNAL   Antimicrob. Agents Chemother. 55 (4), 1520-1526 (2011)
   PUBMED   21282446
REFERENCE   2  (bases 1 to 6445)
  AUTHORS   Ramirez,M.S., Adams,M.D., Bonomo,R.A., Centron,D. and Tolmasky,M.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-DEC-2010) Department of Genetics, Case Western Reserve
            University, 10900 Euclid Ave, Cleveland, OH 44118, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.0.12
            Genome Coverage       :: 50x
            Sequencing Technology :: Solexa
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..6445
                     /organism="Acinetobacter baumannii A118"
                     /mol_type="genomic DNA"
                     /submitter_seqid="scaffold1213"
                     /strain="A118"
                     /isolation_source="blood of a patient in the intensive care
                     unit"
                     /host="Homo sapiens"
                     /db_xref="taxon:927193"
                     /country="Argentina: Buenos Aires"
                     /note="largely drug susceptible and naturally competent"
     CDS             <2..883
                     /locus_tag="gtrOC21"
                     /protein_id="AKC34389.1"
                     /product="predicted glycosyltransferase"
                     /note="ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.370;conf=100.00;score=57.71;cscore=54.49;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22;"
     CDS             complement(886..1674)
                     /product="predicted glycosyltransferase"
                     /locus_tag="gtrOC_A118_2"
                     /protein_id="WP_000069002.1"
                     /note="ID=1_2;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=11bp;gc_cont=0.298;conf=100.00;score=86.31;cscore=72.91;sscore=13.39;rscore=6.07;uscore=2.91;tscore=3.47;"
                     /note="ID=1_3;partial=00;start_type=TTG;rbs_motif=AATAA;rbs_spacer=7bp;gc_cont=0.298;conf=88.14;score=8.73;cscore=10.84;sscore=-2.11;rscore=5.00;uscore=2.51;tscore=-9.63;"
     CDS             complement(1983..2612)
                     /locus_tag="gtrOC_A118_1"
                     /product="predicted capsular protein"
                     /protein_id="WP_000510832.1"
                     /note="ID=1_4;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=11bp;gc_cont=0.311;conf=100.00;score=47.59;cscore=34.41;sscore=13.18;rscore=6.07;uscore=3.64;tscore=3.47;"
     CDS             complement(2696..3736)
                     /locus_tag="gtrOC19"
                     /protein_id="AKC34395.1"
                     /product="predicted glycosyltransferase"
                     /note="ID=1_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.390;conf=100.00;score=109.82;cscore=112.08;sscore=-2.27;rscore=-4.87;uscore=-2.01;tscore=3.47;"
     CDS             complement(3749..4732)
                     /locus_tag="gtrOC18"
                     /product="GT4"
                     /protein_id="AKC34396.1"
                     /note="ID=1_6;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=11bp;gc_cont=0.392;conf=100.00;score=115.10;cscore=113.71;sscore=1.39;rscore=2.56;uscore=-5.69;tscore=3.47;"
     CDS             complement(4735..5544)
                     /locus_tag="pda2"
                     /product="CE4"
                     /protein_id="AKC34397.1"
                     /note="ID=1_7;partial=00;start_type=GTG;rbs_motif=AATAA;rbs_spacer=13bp;gc_cont=0.399;conf=100.00;score=92.63;cscore=91.40;sscore=1.23;rscore=6.54;uscore=-1.48;tscore=-4.96;"
     CDS             complement(5558..>6469)
                     /locus_tag="gtrOC1"
                     /protein_id="AKC34398.1"
                     /product="predicted glycosyltransferase"
                     /note="ID=1_8;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.388;conf=100.00;score=100.70;cscore=97.48;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22;"
ORIGIN
        1 atgcaaaaga aactgctcat cattggtaaa cgcggcggta ttttgcagtg gtacgaaaat
       61 attcctgtct cttatacacn nnnnnnnnnn nnnnnncaaa gatatatata cggcaaattt
      121 actcaaaaag aaactgcaaa cgtttcagcc agatttgatt ctcattgccg atctttttta
      181 ttttaatgat catttactgc aagttttggc agactttcca tgtaaaaaag cacattggat
      241 tggtgacttt tttgatgaac gcttattaaa atctaaagat gtcattgatt tatattgctt
      301 taccgattct agctttatcg aagatgcgag agcaatgggg ctaaattacg ccatttatct
      361 acctcttgct tataacccag atgtcttctt ttctagtaat gaacaaaaag atgatcgtct
      421 tttatttgta ggcgcatggt cgcctgatcg acaagaactc attgaacaga ttccccttcc
      481 catcactgtc tatgggaaag gatgggataa actcagcaaa acaaacagta ttgttcaccc
      541 tcacaatatt tctttgactg aagttgccga actctacaga acgcatcgtt acatcttgaa
      601 tgtcattaac aagaaaaaca ttcgtcaagg tatgaatatg cgttgtttcg aagctccggc
      661 ttgtggttgt attctggtaa gcgagtatgt tgaagatctt aactatgctt ttgatatcaa
      721 aaatgaaata atttcatttg agaatccgca agaattgcaa ttgaagttaa aagacccaat
      781 aatcagcgct gaagcagcca tgtataaagt tcaacagagt catacttata aaaataggtt
      841 agatcaaatt atagatcaca tggctacttt aaaatctgtt taatttctat tcctcttttt
      901 cataatactt cttgataaac gtagaatttt tttcaaatta aaaaaaatat tctttaaaac
      961 attatttgaa acatagaact gagaacacat agcccaaaaa aactgtgatt gcttacgctg
     1021 gtatagcaac tgaatataag ctttttgtac atcaaaataa ctttggtcta cattacctgg
     1081 acttttgtga tacaagtgaa aatcaataac atagcttttc aatcctaaat tttttgcatt
     1141 ttgacataaa tcaatagcat aaaaatggaa accgttgagg atactggaag ttgttgataa
     1201 attatgcttt ctatttaata ttaaaaaatt ttcatccaaa ctcattactt gtgatggaag
     1261 tattcctttt ttcagatagg gaaatacagg atcagatatt cgaacatatg tatgaccagc
     1321 ttcactctta ccagcattac ctaaaacagc ccaattaggg tcaatgtttt caatctctaa
     1381 aattctctgc tctaaatcat ctctactatc atatttaaac aaaatatctt gatggcagaa
     1441 aattagatat tctcctttgg cttcttttaa tgcacgatta atcccactat agccatcaaa
     1501 ttgattggaa tttttattat cgaaatatag aaactcaact ttctcatcaa atcctgcaag
     1561 ccttgcactc tccaccattt ccatatattc atcgaaacga gtaacaagtg tacaaaaagt
     1621 aaatttcttc tcaaacttta aatcacctcc taatttccgt actaaattag acatatatac
     1681 cttctttaaa aagaatacta acaatcataa attatgaaaa attatagcct ctccaagaag
     1741 gctcgtcctc ttaaattttc tttgctttaa atagttttct gttgctagtc gagtatcttt
     1801 tgtaaattta atcaatttag gtataaaaat tctctcttta tttttaaaca aaagcgcagc
     1861 tgctaccaat acatcactac tattaaattt atagttgtaa taatgccctg cggaaccaga
     1921 acgagcatac aatatattat aatcagactc tctaagtgcc aaaattgcag aaatatagca
     1981 aatcaagtat tgtggatttt caattttttg caaaagctct ttattatccc ataaaaattt
     2041 ataataattt ttaggatcag aacnnnnnnn nnnnnnnnnn aaaactctaa aaaccacgcc
     2101 ttaataaaag gactatttac aggagcaata ataaaccaat tttcacttat tggattatta
     2161 atatctactg tacaagcatc actataaaat aaaaaagcat catagccctg taccttagaa
     2221 attatccatt ctatactttc agtaagaaaa atactggcat ccatccagac gccaccatat
     2281 ttagataaca aactcaatcg aatatagtca gaaatatttg ctactggtaa atcattattg
     2341 aattttggaa gatcaatata ttcataaaca ctgtccccat ccaaaacatt tattttataa
     2401 tctggacaca ttctctcaac ttgctttaca cacaattcaa caagcaaact gtgctcagga
     2461 gaatcccaat agatccaaat cactttggga ataatacctt caactttttc attaggtctt
     2521 tttttatagg agatccaatc aatatctata tttttagata aattacgaac tagaacatta
     2581 aagagttttc tttctttttt gaatattccc atactaatac cttttaaaat ttaaccattt
     2641 gctcaaaatc aaaaaataaa gacttcaatt ttatattttg ttacacttaa taacactaaa
     2701 ataaaagctc ttttaatttc ttatttatat cctcaacatg gttttgaact tgcaaggtct
     2761 gaataatctt agagaaatga tattcagtat atacatccaa caaacctaac caatgttgtt
     2821 cagctaagaa attcagttgt cgcttgatat ttacatcctg tactgcagct ccatcgtaaa
     2881 gtaccagcag cttacttcct gacatcacta cttcagccac catcgacgta gagtctggac
     2941 ttattagaat ccagtcagcg gctttaatgt agtctttgat atcacagctt tgcccttgtg
     3001 ctacccatgt taactggtca tagggctgaa aaatgccata ctgctcggca agtttctgca
     3061 attctttttc aaaagtaacc gatgttcttc gtgatgtcgt cagtaacaat ctcgctgtag
     3121 gatattgctt tcgaacctgc tgtaaaacag ttgcccattg tgccgcctta ccaatcttta
     3181 ctgttttagt gtcagcacca atcaaaattg taatcgtttg ttcagcattt tgaataccca
     3241 aatgttctcg ggcctgctcg cgtgttagag gtaaagcact cattttattc ggtgcaattg
     3301 gatagtaaaa ataatgaggc aaaacagctt gttgttcatg aatagtaaat accacatcaa
     3361 acaagttagc gcgaatcccc cgtaatgaac tcgcgaccaa atttttcaca gactgatctt
     3421 tgtgtaaatg ttgtttgagc aatagattgg caagtagagt gtttccccct gccgatacaa
     3481 tataagcaac ctgtttctgc tctaatgctc ttagggtttg ggcatcaaaa aaataacgta
     3541 accactctgt atttattgaa aacttgatca gtaacttcag aacacgatac aaccattttt
     3601 taggtagatt taattgaacc cattcgacct gatactcttg ctgttgattc agtagttgca
     3661 ctattccttg agtttgagtt tcatggcctg ctttaccatc ggtcaacgct aggataaaag
     3721 gtttttgttg tgccattaat ctatcatcct atgctgaaag caatgattga tagacttgga
     3781 ccgtatgatc aatcattttt gtaaaagtca gttgttcctg tgccagagca taagcctttt
     3841 taaaacttgc ttcgggggct accacatcca aatagttttg aatcacttgt tgcaatgctt
     3901 caatattatt tggttcacat agaaactcaa caggaataaa ctcagccatc attccgacat
     3961 cagttcctaa cacaggacgt tgaagcaata aactttcagc aagtgtatac gggccccctt
     4021 cacgcaagga agacacaatc aaagcctcat gatctgtaat caatgggtga atattgtcgc
     4081 tatacccata caagtgaacc cgatcagcta attggtactc ttgaatcaat tgctctaact
     4141 tttctcgttc ttcaccatca ccaacaatag ttaattggtg tgaaatgttc cgccaagcag
     4201 ccagtaaaag atcgaaacct ttcacttcat ttaaacgccc aatggcaata aattttctat
     4261 tttttacaaa tgattgagca ggcatattca aagaaatacc attatagacc acactgagtt
     4321 tttccggctg ccctacaatc tgcgcgagtc gcttacttac acaaatgata tgatcaaatg
     4381 ctaagtaaga atcaatcttt ttctttgcac catggatagt caccacacaa gggaaatcaa
     4441 aacctacaat catgccttgc aaaagtttgg ccgttttaga agcatgagca tgtagcactt
     4501 gtggttctgt ccccaatatt gtttttttaa gcagatattt cgtccacgga ttataacgac
     4561 tgccactcat atcaaaagca acaaagttta ccgaactttc cacttgattt tgatatttct
     4621 gatgtgcaat taaagaaact tcatgtgctt gtgataaacc agcagccagc tcaagtacat
     4681 gcttttctag gccaccttcc tcatcacttg ccatcacaag cgtaattttc atgattagcc
     4741 ctcacgcgta ccaagtttta aacgaagctt gacggcaaat aatgaatctt ttccgctgat
     4801 cttaatacgt tgtagttgca taaagtccgg ctgttcatca tcaatacctt cgattgtggt
     4861 cactgcattg ctataccctg actgtttcgc cagtttaaca tctcggtctg agtaaatacc
     4921 aaatgggtaa gcaaaactgg ttactggctt ttctatcagt tgttcaagcc actgctttga
     4981 atcagttagt tcttttaaac aatccgtatc atccagtttg tttaaattag catgcgttaa
     5041 cgtatgtgaa ccaatttcaa tcagttcgct atctgccagt tgcttgactt gagcatcatt
     5101 caacttagct tcacgcatga gttcaccact attatgatgt tcttttttat aggttgacca
     5161 atcacgatca tgacgatcaa ccaccacata tatggttgcc ttggcctgat atttttctaa
     5221 aataggataa gcattttgta agttgtctaa ataaccatca tcaaaggtaa tggcaactgt
     5281 tttggcaggg tgctttcccc agttctcttg caattcgtgc atcgttacaa aatggaagcc
     5341 ttgcgctttc atccaggcaa cttgcttttc aaactcagcg ggcttgaccc gaagcttatt
     5401 aaatttggca ccattaatat ggtctcgtac catgtgatac atcaatacac gtggtcgatt
     5461 ccaatccact gctggcttcc accacgcata cttatagcta aataacacaa taagcaagac
     5521 cagtaaaatc aggatataaa acacaatgcc aaactcatta tttcgctaaa agatatgttg
     5581 ccacacggtc tgcttcttta aaagcataag gttgtggcaa ctgtacgaca caagtattct
     5641 gtgaaattag ttgtgattct atcatttgat caatcgagtg cgtaattcta tcctctttca
     5701 accgatcgat tgctatgacc cctacgcgac aacccgcagt aagtgcttca aaaaccatag
     5761 aaacgctatc ttctgttacc catacagctt ctgctttttg catctcttca aaaatccagc
     5821 cctgaggtgt ttgctcaacc ggaaatattt gtaaatgcgg ggcaaaactt tgttgtctta
     5881 aaatatcaat aaactctgct ggtgttcgac gtgaagtcgt taaaatgatt tcggcatctg
     5941 gattattctc aacaatcttt tgcacgctta ataatacttt ttcttggttc cattgatgcc
     6001 gttttgacga accacctaat gcaattaaaa ttctagaagc ttgatggcgt ttttcattac
     6061 gaatgggatt taatgcccca cgcgtaacaa tcacttggtt attcgcagga ataccgtcgt
     6121 gctctggaat cacagcataa ttaaaccaaa ccgtcggtaa atttggcttc attaaaataa
     6181 tggtcttagc ctttttgaaa attttaccga gcaaccagac acgaaaatgt gtatgacttc
     6241 caacaccaaa tataaaatcg ggtgcctgtt gaaatagaga tttttttgaa gaaaaaagcg
     6301 ttttgattag agaaagaata ggcaagtcat taatagagac ttcttcaaaa gttgcatttg
     6361 cctgctgtct ttgcatcgcc tgaaacaagc ctaaagcttg tgagcgatgc cctgctttac
     6421 catcagagac atagacaata tgcat
//
