Search Results

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MultiGeneBlast hits


Query: P.ruminicola xynA gene and xynB gene.
CP000679 : Caldicellulosiruptor saccharolyticus DSM 8903    Total score: 1.0     Cumulative Blast bit score: 221
Hit cluster cross-links:   
GH10
Location: 142-1251
xynA
GH43 1
Location: 1334-2293
xynB
Cellulose 1,4-beta-cellobiosidase
Accession: ABP67987
Location: 2543651-2545753

BlastP hit with xynA
Percentage identity: 38 %
BlastP bit score: 221
Sequence coverage: 93 %
E-value: 6e-62

NCBI BlastP on this gene
Csac_2410
Xylan 1,4-beta-xylosidase
Accession: ABP67986
Location: 2542107-2543627
NCBI BlastP on this gene
Csac_2409
Endo-1,4-beta-xylanase
Accession: ABP67985
Location: 2541057-2542070
NCBI BlastP on this gene
Csac_2408
Query: P.ruminicola xynA gene and xynB gene.
CP018620 : Paenibacillus xylanexedens strain PAMC 22703    Total score: 1.0     Cumulative Blast bit score: 220
Hit cluster cross-links:   
GH10
Location: 142-1251
xynA
GH43 1
Location: 1334-2293
xynB
1,4-beta-xylanase
Accession: APO47234
Location: 6070926-6071927

BlastP hit with xynA
Percentage identity: 33 %
BlastP bit score: 220
Sequence coverage: 93 %
E-value: 9e-65

NCBI BlastP on this gene
BS614_26405
purine-nucleoside phosphorylase
Accession: APO47233
Location: 6069567-6070385
NCBI BlastP on this gene
BS614_26400
LacI family transcriptional regulator
Accession: APO47232
Location: 6068371-6069447
NCBI BlastP on this gene
BS614_26395
ABC transporter permease
Accession: APO47231
Location: 6066971-6067936
NCBI BlastP on this gene
BS614_26390
Query: P.ruminicola xynA gene and xynB gene.
CP036426 : Planctomycetes bacterium ElP chromosome.    Total score: 1.0     Cumulative Blast bit score: 214
Hit cluster cross-links:   
GH10
Location: 142-1251
xynA
GH43 1
Location: 1334-2293
xynB
putative CtpA-like serine protease
Accession: QDV35013
Location: 3554023-3555405
NCBI BlastP on this gene
ElP_29100
hypothetical protein
Accession: QDV35012
Location: 3552854-3553792
NCBI BlastP on this gene
ElP_29090
hypothetical protein
Accession: QDV35011
Location: 3551940-3552491
NCBI BlastP on this gene
ElP_29080
Endo-1,4-beta-xylanase
Accession: QDV35010
Location: 3550520-3551668

BlastP hit with xynA
Percentage identity: 36 %
BlastP bit score: 214
Sequence coverage: 94 %
E-value: 6e-62

NCBI BlastP on this gene
xynA
hypothetical protein
Accession: QDV35009
Location: 3550280-3550495
NCBI BlastP on this gene
ElP_29060
YcfA-like protein
Accession: QDV35008
Location: 3550080-3550271
NCBI BlastP on this gene
ElP_29050
hypothetical protein
Accession: QDV35007
Location: 3547917-3548012
NCBI BlastP on this gene
ElP_29040
site-specific tyrosine recombinase XerC
Accession: QDV35006
Location: 3546793-3547827
NCBI BlastP on this gene
ElP_29030
Query: P.ruminicola xynA gene and xynB gene.
451. : CP000679 Caldicellulosiruptor saccharolyticus DSM 8903     Total score: 1.0     Cumulative Blast bit score: 221
GH10
Location: 142-1251
xynA
GH43 1
Location: 1334-2293
xynB
Cellulose 1,4-beta-cellobiosidase
Accession: ABP67987
Location: 2543651-2545753

BlastP hit with xynA
Percentage identity: 38 %
BlastP bit score: 221
Sequence coverage: 93 %
E-value: 6e-62

NCBI BlastP on this gene
Csac_2410
Xylan 1,4-beta-xylosidase
Accession: ABP67986
Location: 2542107-2543627
NCBI BlastP on this gene
Csac_2409
Endo-1,4-beta-xylanase
Accession: ABP67985
Location: 2541057-2542070
NCBI BlastP on this gene
Csac_2408
452. : CP018620 Paenibacillus xylanexedens strain PAMC 22703     Total score: 1.0     Cumulative Blast bit score: 220
1,4-beta-xylanase
Accession: APO47234
Location: 6070926-6071927

BlastP hit with xynA
Percentage identity: 33 %
BlastP bit score: 220
Sequence coverage: 93 %
E-value: 9e-65

NCBI BlastP on this gene
BS614_26405
purine-nucleoside phosphorylase
Accession: APO47233
Location: 6069567-6070385
NCBI BlastP on this gene
BS614_26400
LacI family transcriptional regulator
Accession: APO47232
Location: 6068371-6069447
NCBI BlastP on this gene
BS614_26395
ABC transporter permease
Accession: APO47231
Location: 6066971-6067936
NCBI BlastP on this gene
BS614_26390
453. : CP036426 Planctomycetes bacterium ElP chromosome.     Total score: 1.0     Cumulative Blast bit score: 214
putative CtpA-like serine protease
Accession: QDV35013
Location: 3554023-3555405
NCBI BlastP on this gene
ElP_29100
hypothetical protein
Accession: QDV35012
Location: 3552854-3553792
NCBI BlastP on this gene
ElP_29090
hypothetical protein
Accession: QDV35011
Location: 3551940-3552491
NCBI BlastP on this gene
ElP_29080
Endo-1,4-beta-xylanase
Accession: QDV35010
Location: 3550520-3551668

BlastP hit with xynA
Percentage identity: 36 %
BlastP bit score: 214
Sequence coverage: 94 %
E-value: 6e-62

NCBI BlastP on this gene
xynA
hypothetical protein
Accession: QDV35009
Location: 3550280-3550495
NCBI BlastP on this gene
ElP_29060
YcfA-like protein
Accession: QDV35008
Location: 3550080-3550271
NCBI BlastP on this gene
ElP_29050
hypothetical protein
Accession: QDV35007
Location: 3547917-3548012
NCBI BlastP on this gene
ElP_29040
site-specific tyrosine recombinase XerC
Accession: QDV35006
Location: 3546793-3547827
NCBI BlastP on this gene
ElP_29030
         
Detecting sequence homology at the gene cluster level with MultiGeneBlast.
Marnix H. Medema, Rainer Breitling & Eriko Takano (2013)
Molecular Biology and Evolution , 30: 1218-1223.