ClusterBlast scores for /mnt/array2/catie/backup_07132020/Multigeneblast/rrun_mgb_07202020/PUL0410.gb Table of genes, locations, strands and annotations of query cluster: PJR32594.1 1 1050 + hypothetical_protein H260_21035 PJR32595.1 1110 1574 - hypothetical_protein H260_21040 PJR32596.1 1571 2446 - N-acetylmannosamine_kinase H260_21045 PJR32597.1 2443 3132 - N-acetylmannosamine-6-phosphate_2-epimerase H260_21050 PJR32598.1 3180 4670 - gnl|TC-DB|P41036|2.A.1.12.1 H260_21055 PJR32599.1 4779 5672 - GH33 H260_21060 PJR32600.1 5794 6585 - DBD-Pfam|GntR,DBD-SUPERFAMILY|0037767 H260_21065 Significant hits: 1. CP046527_0 Escherichia coli strain RM19259 chromosome, complete genome. 2. CP043539_0 Escherichia coli O157 strain Al Ain chromosome, complete genome. 3. CP040311_0 Escherichia coli strain F3398 chromosome, complete genome. 4. CP028700_0 Escherichia coli strain 105 chromosome, complete genome. 5. CP028698_0 Escherichia coli strain 106 chromosome, complete genome. 6. CP028695_0 Escherichia coli strain 107 chromosome, complete genome. 7. CP028693_0 Escherichia coli strain 108 chromosome, complete genome. 8. CP028690_0 Escherichia coli strain 109 chromosome, complete genome. 9. CP028687_0 Escherichia coli strain 110 chromosome, complete genome. 10. CP028685_0 Escherichia coli strain 111 chromosome, complete genome. 11. CP028683_0 Escherichia coli strain 112 chromosome, complete genome. 12. CP028654_0 Escherichia coli strain 122 chromosome, complete genome. 13. CP028652_0 Escherichia coli strain 123 chromosome, complete genome. 14. CP028650_0 Escherichia coli strain 124 chromosome, complete genome. 15. CP018252_0 Escherichia coli strain 9000, complete genome. 16. CP018250_0 Escherichia coli strain 10671 chromosome, complete genome. 17. CP018247_0 Escherichia coli strain 7784 chromosome, complete genome. 18. CP018239_0 Escherichia coli strain 272 chromosome, complete genome. 19. CP018237_0 Escherichia coli strain 155, complete genome. 20. CP017444_0 Escherichia coli O157:H7 strain 8368 chromosome, complete genome. 21. CP017440_0 Escherichia coli O157:H7 strain 3384 chromosome, complete genome. 22. CP015023_0 Escherichia coli strain SRCC 1675 chromosome, complete genome. 23. CP015020_0 Escherichia coli strain 28RC1 chromosome, complete genome. 24. CP012802_0 Escherichia coli O157:H7 strain WS4202, complete genome. 25. BA000007_0 Escherichia coli O157:H7 str. Sakai DNA, complete genome. 26. CP040316_0 Escherichia coli strain CV261 chromosome, complete genome. 27. CP040313_0 Escherichia coli strain M7638 chromosome, complete genome. 28. CP040309_0 Escherichia coli strain 21B8 chromosome, complete genome. 29. CP040307_0 Escherichia coli strain F1 E4 chromosome, complete genome. 30. CP040305_0 Escherichia coli strain HB6 chromosome, complete genome. 31. CP035366_0 Escherichia coli O157:H7 strain C1-057 chromosome, complete genome. 32. CP028680_0 Escherichia coli strain 113 chromosome, complete genome. 33. CP028677_0 Escherichia coli strain 114 chromosome, complete genome. 34. CP028674_0 Escherichia coli strain 115 chromosome, complete genome. 35. CP028671_0 Escherichia coli strain 116 chromosome, complete genome. 36. CP028668_0 Escherichia coli strain 117 chromosome, complete genome. 37. CP028665_0 Escherichia coli strain 118 chromosome, complete genome. 38. CP028662_0 Escherichia coli strain 119 chromosome, complete genome. 39. CP028659_0 Escherichia coli strain 120 chromosome, complete genome. 40. CP028656_0 Escherichia coli strain 121 chromosome, complete genome. 41. CP028647_0 Escherichia coli strain 130 chromosome, complete genome. 42. CP028644_0 Escherichia coli strain 131 chromosome, complete genome. 43. CP028641_0 Escherichia coli strain 132 chromosome, complete genome. 44. CP028638_0 Escherichia coli strain 133 chromosome, complete genome. 45. CP028635_0 Escherichia coli strain 134 chromosome, complete genome. 46. CP028632_0 Escherichia coli strain 135 chromosome, complete genome. 47. CP017446_0 Escherichia coli O157:H7 strain 9234 chromosome, complete genome. 48. CP017442_0 Escherichia coli O157:H7 strain 4276 chromosome, complete genome. 49. CP017438_0 Escherichia coli O157:H7 strain 2159 chromosome, complete genome. 50. CP017436_0 Escherichia coli O157:H7 strain 2149 chromosome, complete genome. 51. CP017434_0 Escherichia coli O157:H7 strain 1130 chromosome, complete genome. 52. CP015241_0 Escherichia coli strain 2013C-4465 chromosome, complete genome. 53. CP001846_0 Escherichia coli O55:H7 str. CB9615, complete genome. 54. CP019944_0 Escherichia coli strain DSM 103246 chromosome, complete genome. 55. CP048605_0 Escherichia coli strain PapRG-06-5 chromosome, complete genome. 56. CP049204_0 Escherichia coli strain PapM-32-1 chromosome, complete genome. 57. CP010304_0 Escherichia coli O157:H7 str. SS52, complete genome. 58. CP008805_0 Escherichia coli O157:H7 str. SS17, complete genome. 59. AE005174_0 Escherichia coli O157:H7 str. EDL933 genome. 60. CP001925_0 Escherichia coli Xuzhou21, complete genome. 61. CP001164_0 Escherichia coli O157:H7 str. EC4115, complete genome. 62. CP007133_0 Escherichia coli O145:H28 str. RM12761, complete genome. 63. CP007136_0 Escherichia coli O145:H28 str. RM12581, complete genome. 64. CP006736_0 Shigella dysenteriae 1617, complete genome. 65. CP018245_0 Escherichia coli strain 472, complete genome. 66. CP018243_0 Escherichia coli strain 350 chromosome, complete genome. 67. CP018241_0 Escherichia coli strain 319, complete genome. 68. CP040314_0 Escherichia coli strain MA11 chromosome, complete genome. 69. CP043752_0 Escherichia coli strain CVM N56639 chromosome, complete genome. 70. CP034843_0 Escherichia coli strain L103-2 chromosome, complete genome. 71. LR217818_0 Escherichia coli strain NCTC86 genome assembly, chromosome: 1. 72. CP049343_0 Escherichia coli strain UMB200201_11 chromosome, complete genome. 73. CP010238_0 Escherichia coli strain S50, complete genome. 74. CP023200_0 Escherichia coli strain 646 chromosome. 75. CP035331_0 Escherichia coli strain BR25-DEC chromosome. 76. LR134296_0 Escherichia coli strain NCTC9041 genome assembly, chromosome: 1. 77. LR134295_0 Escherichia coli strain NCTC9080 genome assembly, chromosome: 1. 78. LR134240_0 Escherichia coli strain NCTC9107 genome assembly, chromosome: 1. 79. LR134239_0 Escherichia coli strain NCTC9100 genome assembly, chromosome: 1. 80. LR134231_0 Escherichia coli strain NCTC9087 genome assembly, chromosome: 1. 81. LR134228_0 Escherichia coli strain NCTC9699 genome assembly, chromosome: 1. 82. CP047461_0 Escherichia coli strain ZF34 chromosome, complete genome. 83. CP047455_0 Escherichia coli strain ZF31 chromosome, complete genome. 84. CP038857_0 Escherichia coli strain PigCaeca_2 chromosome, complete genome. 85. CP038791_0 Escherichia coli strain PF9285 chromosome, complete genome. 86. CP030281_0 Escherichia coli strain E308 chromosome, complete genome. 87. CP026929_0 Escherichia coli strain CFS3246 chromosome, complete genome. 88. CP045863_0 Escherichia coli O157:H7 strain CFSAN076619 chromosome, complete genome. 89. CP040572_0 Escherichia coli O157:H7 strain ECP17-46 chromosome, complete genome. 90. CP040570_0 Escherichia coli O157:H7 strain ECP17-1298 chromosome, complete genome. 91. CP038494_0 Escherichia coli O157:H7 strain TT12B chromosome, complete genome. 92. CP035545_0 Escherichia coli strain FSIS11705876 chromosome, complete genome. 93. CP034384_0 Escherichia coli O157:H7 strain FRIK804 chromosome, complete genome. 94. CP032811_0 Escherichia coli strain ERL03-1416 chromosome, complete genome. 95. CP032805_0 Escherichia coli strain ERL05-0623 chromosome, complete genome. 96. CP032801_0 Escherichia coli strain ERL06-2442 chromosome, complete genome. 97. CP032797_0 Escherichia coli strain ERL06-2497 chromosome, complete genome. 98. CP032795_0 Escherichia coli strain ERL06-2503 chromosome, complete genome. 99. CP031913_0 Escherichia coli O157:H7 strain FWSEC0004 chromosome, complete genome. 100. CP028609_0 Escherichia coli strain 142 chromosome, complete genome. 101. CP028607_0 Escherichia coli strain 143 chromosome, complete genome. 102. CP028600_0 Escherichia coli strain 147 chromosome, complete genome. 103. CP028598_0 Escherichia coli strain 148 chromosome, complete genome. 104. CP028596_0 Escherichia coli strain 149 chromosome, complete genome. 105. CP022689_0 Escherichia coli strain CDC#03-98 chromosome, complete genome. 106. CP022050_0 Escherichia coli O157 strain FDAARGOS_293 chromosome, complete genome. 107. CP017669_0 Escherichia coli strain PA20, complete genome. 108. CP017251_0 Escherichia coli strain NADC 5570/86-24/6564, complete sequence. 109. CP017249_0 Escherichia coli strain NADC 5570/86-24/6565 chromosome, complete genome. 110. CP015855_0 Escherichia coli strain EDL933-1 genome. 111. CP015853_0 Escherichia coli strain ATCC 43889 chromosome, complete genome. 112. CP014314_0 Escherichia coli O157:H7 strain JEONG-1266, complete genome. 113. CP001368_0 Escherichia coli O157:H7 str. TW14359, complete genome. 114. CP028629_0 Escherichia coli strain 136 chromosome, complete genome. 115. CP028626_0 Escherichia coli strain 137 chromosome, complete genome. 116. CP028623_0 Escherichia coli strain 138 chromosome, complete genome. 117. CP028620_0 Escherichia coli strain 139 chromosome, complete genome. 118. CP028617_0 Escherichia coli strain 140 chromosome, complete genome. 119. CP028614_0 Escherichia coli strain 141 chromosome, complete genome. 120. CP028603_0 Escherichia coli strain 144 chromosome, complete genome. 121. CP028592_0 Escherichia coli strain 150 chromosome, complete genome. 122. CP016625_0 Escherichia coli O157:H7 strain FRIK944, complete genome. 123. CP015846_0 Escherichia coli O157:H7 strain FRIK2069, complete genome. 124. CP015843_0 Escherichia coli O157:H7 strain FRIK2455, complete genome. 125. CP015842_0 Escherichia coli O157:H7 strain FRIK2533, complete genome. 126. CP010240_0 Escherichia coli strain C7, complete genome. 127. CP003109_0 Escherichia coli O55:H7 str. RM12579, complete genome. 128. CP010228_0 Escherichia coli strain S3, complete genome. 129. CP035706_0 Escherichia coli O157:H7 strain COPRO21317 chromosome. 130. CP033605_0 Escherichia coli O157:H7 strain TR01 chromosome, complete genome. 131. CP043542_0 Escherichia coli strain F2_81 chromosome, complete genome. 132. CP023386_0 Escherichia coli strain 1190 chromosome, complete genome. 133. CP030939_0 Escherichia coli strain AMSHJX01 chromosome, complete genome. 134. CP028126_0 Escherichia coli O26 str. RM10386 chromosome, complete genome. 135. CP028116_0 Escherichia coli O26 str. RM8426 chromosome, complete genome. 136. CP028112_0 Escherichia coli O103 str. RM8385 chromosome, complete genome. 137. CP048371_0 Escherichia coli strain 163 chromosome, complete genome. 138. CP048367_0 Escherichia coli strain 164 chromosome, complete genome. 139. CP048310_0 Escherichia coli strain 32-4 chromosome, complete genome. 140. CP034734_0 Escherichia coli strain L53 chromosome, complete genome. 141. CP029973_0 Escherichia coli strain 51008369SK1 chromosome, complete genome. 142. CP029741_0 Escherichia coli strain AR_0085 chromosome, complete genome. 143. CP029574_0 Escherichia coli strain DA33133 chromosome, complete genome. 144. CP026935_0 Escherichia coli strain CFS3292 chromosome, complete genome. 145. CP026932_0 Escherichia coli strain CFS3273 chromosome, complete genome. 146. CP025950_0 Escherichia coli strain SCEC020023 chromosome, complete genome. 147. CP018962_0 Escherichia coli strain Ecol_422 chromosome, complete genome. 148. CP017980_0 Escherichia coli strain CH611_eco genome. 149. CP016755_0 Escherichia coli strain FORC_044 chromosome, complete genome. 150. CP008957_0 Escherichia coli O157:H7 str. EDL933, complete genome. 151. CP031919_0 Escherichia coli O145:NM strain FWSEC0002 chromosome, complete genome. 152. AP019708_0 Escherichia coli O145:H28 122715 DNA, complete genome. 153. AP019706_0 Escherichia coli O145:H28 112648 DNA, complete genome. 154. AP019703_0 Escherichia coli O145:H28 10942 DNA, complete genome. 155. CP000034_0 Shigella dysenteriae Sd197, complete genome. 156. CP028110_0 Escherichia coli O121 str. RM8352 chromosome, complete genome. 157. CP048604_0 Escherichia coli strain PapRG-06-3 chromosome, complete genome. 158. CP023359_0 Escherichia coli strain 1943 chromosome, complete genome. 159. CP010235_1 Escherichia coli strain S40, complete genome. 160. CP010235_0 Escherichia coli strain S40, complete genome. 161. LR134220_0 Escherichia coli strain NCTC11121 genome assembly, chromosome: 1. 162. LR134152_0 Escherichia coli strain NCTC9104 genome assembly, chromosome: 1. 163. CP025747_0 Escherichia coli strain ML35 chromosome, complete genome. 164. CP023383_0 Escherichia coli strain 1223 chromosome, complete genome. 165. CP011134_0 Escherichia coli VR50, complete genome. 166. CP010371_0 Escherichia coli strain 6409, complete genome. 167. CP010237_0 Escherichia coli strain S43, complete genome. 168. CP010171_0 Escherichia coli strain H7, complete genome. 169. CP010152_0 Escherichia coli strain D9, complete genome. 170. CP010143_0 Escherichia coli strain D4, complete genome. 171. AP021890_0 Escherichia coli 2017.15.01CC DNA, complete genome. 172. CP048330_0 Escherichia coli strain 10 chromosome, complete genome. 173. CP029057_0 Escherichia coli strain FORC_081 chromosome, complete genome. 174. LR134248_0 Escherichia coli strain NCTC10537 genome assembly, chromosome: 1. 175. CP047231_0 Escherichia coli strain BL21-AI chromosome, complete genome. 176. CP029371_0 Escherichia coli strain C chromosome, complete genome. 177. CP027430_0 Escherichia coli strain AS19-RrmA- chromosome, complete genome. 178. CP019961_0 Escherichia coli strain HKUOPY1 chromosome, complete genome. 179. CP014269_0 Escherichia coli B strain C3029, complete genome. 180. CP014268_0 Escherichia coli B strain C2566, complete genome. 181. CP010816_0 Escherichia coli strain BL21 (TaKaRa), complete genome. 182. CP010585_0 Escherichia coli strain C41(DE3), complete genome. 183. CP010226_0 Escherichia coli strain S1, complete genome. 184. CP001665_0 Escherichia coli 'BL21-Gold(DE3)pLysS AG', complete genome. 185. CP000819_0 Escherichia coli B str. REL606, complete genome. 186. LR134236_0 Escherichia coli strain NCTC9008 genome assembly, chromosome: 1. 187. LR134191_0 Escherichia coli strain NCTC5934 genome assembly, chromosome: 1. 188. CP034787_0 Escherichia coli strain ECCNB20-2 chromosome, complete genome. 189. CP010170_0 Escherichia coli strain H6, complete genome. 190. CP010169_0 Escherichia coli strain H5, complete genome. 191. CP014583_0 Escherichia coli strain CFSAN004176, complete genome. 192. LR134209_0 Escherichia coli strain NCTC11476 genome assembly, chromosome: 1. 193. CP027394_0 Escherichia coli O104:H4 strain FDAARGOS_349 chromosome, complete genome. 194. CP011331_0 Escherichia coli O104:H4 str. C227-11, complete genome. 195. CP010176_0 Escherichia coli strain H10, complete genome. 196. CP003301_0 Escherichia coli O104:H4 str. 2009EL-2071, complete genome. 197. CP003297_0 Escherichia coli O104:H4 str. 2009EL-2050, complete genome. 198. CP003289_0 Escherichia coli O104:H4 str. 2011C-3493, complete genome. 199. CP013662_0 Escherichia coli strain 08-00022, complete genome. 200. CP010344_0 Escherichia coli ECC-1470, complete genome. 201. CP010236_0 Escherichia coli strain S42, complete genome. 202. CP045975_0 Escherichia coli strain AUSMDU00002545 chromosome, complete genome. 203. CP032808_0 Escherichia coli strain ERL04-3476 chromosome, complete genome. 204. CP032803_0 Escherichia coli strain ERL05-1306 chromosome, complete genome. 205. CP032793_0 Escherichia coli strain NZRM3614 chromosome, complete genome. 206. CP032791_0 Escherichia coli strain NZRM4165 chromosome, complete genome. 207. CP032789_0 Escherichia coli strain NZRM4169 chromosome, complete genome. 208. AP018488_0 Escherichia coli O157:H7 pv15-279 DNA, complete genome. 209. CP043414_0 Escherichia coli strain EC42405 chromosome, complete genome. 210. CP021844_0 Escherichia coli strain EC1515 chromosome, complete genome. 211. CP021840_0 Escherichia coli strain EC974 chromosome, complete genome. 212. CP049201_0 Escherichia coli strain PapRG-04-4 chromosome, complete genome. 213. LR134222_0 Escherichia coli strain NCTC11129 genome assembly, chromosome: 1. 214. CP043744_0 Escherichia coli strain CVM N16EC0879 chromosome, complete genome. 215. CP043478_0 Escherichia coli strain ST130 chromosome, complete genome. 216. CP028381_0 Escherichia coli strain RM10466 chromosome, complete genome. 217. CP026939_0 Escherichia coli strain CFS3313 chromosome, complete genome. 218. CP010145_0 Escherichia coli strain D5, complete genome. 219. LR134227_0 Escherichia coli strain NCTC9102 genome assembly, chromosome: 1. 220. CP050646_0 Escherichia coli strain PapM-36-2 chromosome, complete genome. 221. CP041302_0 Escherichia coli strain MSHS 472 chromosome, complete genome. 222. CP029212_0 Escherichia coli strain H8Ecoli chromosome. 223. CP020048_0 Escherichia coli strain AR_0118, complete genome. 224. CP018948_0 Escherichia coli strain Ecol_224 chromosome, complete genome. 225. CP018323_0 Escherichia coli strain KSC9 chromosome, complete genome. 226. CP016546_0 Escherichia coli strain O177:H21 chromosome, complete genome. 227. CP010230_0 Escherichia coli strain S21, complete genome. 228. CP010177_0 Escherichia coli strain H14, complete genome. 229. CP010167_0 Escherichia coli strain H3, complete genome. 230. CP023165_0 Escherichia coli O22:H8 strain RM10809-3 chromosome, complete genome. 231. CP020509_0 Escherichia coli strain 165 chromosome, complete genome. 232. CP031105_0 Escherichia coli strain AMSCJX02 chromosome, complete genome. 233. CP034784_0 Escherichia coli strain ECZP248 chromosome, complete genome. 234. CP041747_0 Escherichia coli strain NCCP 15739 chromosome, complete genome. 235. CP043754_0 Escherichia coli strain CVM N56338 chromosome, complete genome. 236. CP043487_0 Escherichia coli strain AQ15 chromosome, complete genome. 237. CP043486_0 Escherichia coli strain SL112 chromosome, complete genome. 238. CP002185_0 Escherichia coli W, complete genome. 239. CP035312_0 Escherichia coli strain D72 chromosome, complete genome. 240. LR134226_0 Escherichia coli strain NCTC9088 genome assembly, chromosome: 1. 241. CP048326_0 Escherichia coli strain 61 chromosome, complete genome. 242. CP048322_0 Escherichia coli strain 64 chromosome, complete genome. 243. CP031546_0 Escherichia coli strain cq9 chromosome, complete genome. 244. CP020520_0 Escherichia coli strain 190 chromosome, complete genome. 245. CP010315_0 Escherichia coli strain 789, complete genome. 246. CP010140_0 Escherichia coli strain D3, complete genome. 247. CP047576_0 Escherichia coli strain 94EC chromosome, complete genome. 248. CP029242_0 Escherichia coli strain ECCRA-119 chromosome, complete genome. 249. CP028122_0 Escherichia coli O43 str. RM10042 chromosome, complete genome. 250. CP018840_0 Escherichia coli strain KSC64 chromosome, complete genome. 251. CP048376_0 Escherichia coli strain 38 chromosome, complete genome. 252. CP048344_0 Escherichia coli strain 124 chromosome, complete genome. 253. CP040397_0 Escherichia coli strain BA22372 chromosome, complete genome. 254. CP040381_0 Escherichia coli strain A1_180 chromosome, complete genome. 255. CP035944_0 Escherichia coli strain AR24.2b chromosome, complete genome. 256. CP035325_0 Escherichia coli strain BR12-DEC chromosome. 257. CP034966_0 Escherichia coli strain WCHEC020032 chromosome, complete genome. 258. CP034958_0 Escherichia coli strain SCEC020026 chromosome, complete genome. 259. CP032426_0 Escherichia coli strain SCEC020001 chromosome, complete genome. 260. CP031231_0 Escherichia coli strain Es_ST410_NW1_NDM_09_2017 chromosome, complete genome. 261. CP026473_0 Escherichia coli strain KBN10P04869 chromosome, complete genome. 262. CP018965_0 Escherichia coli strain Ecol_517 chromosome, complete genome. 263. CP048439_0 Escherichia coli strain NBRC 3301 chromosome, complete genome. 264. CP047594_0 Escherichia coli strain LD27-1 chromosome, complete genome. 265. CP047127_0 Escherichia coli K-12 chromosome, complete genome. 266. CP045457_0 Escherichia coli strain ET12567 chromosome, complete genome. 267. CP040667_0 Escherichia coli strain S17-1 chromosome, complete genome. 268. CP040664_0 Escherichia coli strain KR2009 chromosome, complete genome. 269. CP037857_0 Escherichia coli BW25113 strain AM187 chromosome, complete genome. 270. CP031214_0 Escherichia coli strain C600 chromosome, complete genome. 271. CP029240_0 Escherichia coli strain BH214 chromosome. 272. CP029239_0 Escherichia coli strain BH212 chromosome, complete genome. 273. CP029238_0 Escherichia coli strain CJ236 chromosome, complete genome. 274. CP028704_0 Escherichia coli strain VH1 chromosome, complete genome. 275. CP028702_0 Escherichia coli strain J53 chromosome, complete genome. 276. CP018801_0 Escherichia coli strain tolC- chromosome, complete genome. 277. CP017979_0 Escherichia coli str. K-12 substr. W3110 substrain ZK126 genome. 278. CP014225_0 Escherichia coli str. K-12 substr. MG1655, complete genome. 279. CP013253_0 Escherichia coli strain CQSW20, complete genome. 280. CP011343_0 Escherichia coli K-12 GM4792 Lac-, complete genome. 281. CP011342_0 Escherichia coli K-12 GM4792 Lac+, complete genome. 282. CP011324_0 Escherichia coli strain SQ2203, complete genome. 283. CP011323_0 Escherichia coli strain SQ171, complete genome. 284. CP011322_0 Escherichia coli strain SQ110, complete genome. 285. CP011321_0 Escherichia coli strain SQ88, complete genome. 286. CP011320_0 Escherichia coli strain SQ37, complete genome. 287. CP009789_0 Escherichia coli K-12 strain ER3413, complete genome. 288. AP009048_0 Escherichia coli str. K-12 substr. W3110 DNA, complete genome. 289. CP041304_0 Escherichia coli strain MSHS 133 chromosome, complete genome. 290. CP010157_0 Escherichia coli strain D10, complete genome. 291. AP017610_0 Escherichia coli DNA, complete genome, strain: 20Ec-P-124. 292. CP040269_0 Escherichia coli strain 1500 chromosome, complete genome. 293. CP010219_0 Escherichia coli strain M18, complete genome. 294. CP010183_0 Escherichia coli strain M3, complete genome. 295. CP010180_0 Escherichia coli strain M1, complete genome. 296. LR134157_0 Escherichia coli strain NCTC11105 genome assembly, chromosome: 1. 297. CP050865_0 Escherichia coli strain 8-3-Ti3 chromosome, complete genome. 298. CP050862_0 Escherichia coli strain 8-3-DC15 chromosome, complete genome. 299. CP043946_0 Escherichia coli strain AR202.2 chromosome, complete genome. 300. CP043942_0 Escherichia coli strain AR216.2b chromosome, complete genome. 301. CP041392_0 Escherichia coli strain ECOL-18-VL-LA-PA-Ryan-0026 chromosome, complete genome. 302. CP041284_0 Escherichia coli strain 54 chromosome, complete genome. 303. CP036177_0 Escherichia coli strain WCHEC025970 chromosome, complete genome. 304. CP035350_0 Escherichia coli strain BR32-DEC chromosome. 305. CP032237_0 Escherichia coli strain ECCWS199 chromosome, complete genome. 306. CP025627_0 Escherichia coli strain SCEC020007 chromosome, complete genome. 307. CP023371_0 Escherichia coli strain 1283 chromosome, complete genome. 308. CP023201_0 Escherichia coli strain 360/16 chromosome. 309. CP020514_0 Escherichia coli strain 219 chromosome, complete genome. 310. CP011061_0 Escherichia coli str. Sanji, complete genome. 311. CP010172_0 Escherichia coli strain H8, complete genome. 312. CP012693_0 Escherichia coli strain FORC_028, complete genome. 313. AP021896_0 Escherichia coli 2018.02.02CC DNA, complete genome. 314. AP021893_0 Escherichia coli 2018-06-4CC DNA, complete genome. 315. CP006262_0 Escherichia coli O145:H28 str. RM13516, complete genome. 316. CP028379_0 Escherichia coli O145 str. RM9872 chromosome, complete genome. 317. CP006027_0 Escherichia coli O145:H28 str. RM13514, complete genome. 318. CP024147_0 Escherichia coli strain 14EC033 chromosome, complete genome. 319. CP019953_0 Escherichia coli M8 chromosome, complete genome. 320. CP015244_0 Escherichia coli O91 str. RM7190 chromosome, complete genome. 321. CP039753_0 Escherichia coli strain NRRL B-1109 chromosome. 322. LR134216_0 Escherichia coli strain NCTC10973 genome assembly, chromosome: 1. 323. CP033250_0 Escherichia coli strain ECCHD184 chromosome, complete genome. 324. CP010160_0 Escherichia coli strain H1, complete genome. 325. CP013663_0 Escherichia coli strain GB089, complete genome. 326. CP002729_0 Escherichia coli UMNK88, complete genome. 327. CP047571_0 Escherichia coli strain 2EC1 chromosome, complete genome. 328. AP021892_0 Escherichia coli 2018-01-1CC DNA, complete genome. 329. CP046009_0 Escherichia coli strain 1919D62 chromosome, complete genome. 330. LR134225_0 Escherichia coli strain NCTC9054 genome assembly, chromosome: 1. 331. LR130532_0 Escherichia coli isolate ecoli019 genome assembly, chromosome: 0. 332. CP043541_0 Escherichia coli strain 15RDA-Livestock feces-ECO087 chromosome. 333. CP035360_0 Escherichia coli strain BR10-DEC chromosome. 334. CP035354_0 Escherichia coli strain BR64-DEC chromosome. 335. CP035339_0 Escherichia coli strain BR29-DEC chromosome. 336. CP035322_0 Escherichia coli strain BR07-DEC chromosome. 337. CP035321_0 Escherichia coli strain BR03-DEC chromosome. 338. CP035320_0 Escherichia coli strain BR02-DEC chromosome. 339. CP010229_0 Escherichia coli strain S10 chromosome, complete genome. 340. CP010150_0 Escherichia coli strain D7, complete genome. 341. CP010148_0 Escherichia coli strain D6, complete genome. 342. LR025096_0 Escherichia coli isolate EC-7215 genome assembly, chromosome: 1. 343. CP031134_0 Escherichia coli strain CFSAN064035 chromosome, complete genome. 344. CP028432_0 Escherichia coli strain RM9975 chromosome, complete genome. 345. CP028429_0 Escherichia coli strain RM9131 chromosome, complete genome. 346. CP028117_0 Escherichia coli O111 str. RM9322 chromosome, complete genome. 347. CP024889_0 Escherichia coli strain AR_0019 chromosome, complete genome. 348. CP019005_0 Escherichia coli strain Ecol_AZ155 chromosome, complete genome. 349. CP014092_0 Escherichia coli strain FDAARGOS_95 chromosome, complete genome. 350. CP047094_0 Salmonella sp. S13 chromosome, complete genome. 351. CP043742_0 Escherichia coli strain CVM N17EC0211 chromosome, complete genome. 352. CP043739_0 Escherichia coli strain CVM N17EC0320 chromosome, complete genome. 353. CP042298_0 Escherichia coli strain RM9088 chromosome, complete genome. 354. CP030919_0 Escherichia coli strain KL53 chromosome, complete genome. 355. CP025739_0 Escherichia coli strain Ec40 chromosome. 356. CP018995_0 Escherichia coli strain Ecol_AZ147 chromosome, complete genome. 357. LR134247_0 Escherichia coli strain NCTC9040 genome assembly, chromosome: 1. 358. CP002291_0 Escherichia coli P12b, complete genome. 359. CU928145_0 Escherichia coli 55989 chromosome, complete genome. 360. CP041002_0 Escherichia coli strain FDAARGOS_772 chromosome, complete genome. 361. CP034738_0 Escherichia coli strain L65 chromosome, complete genome. 362. CP015240_0 Escherichia coli strain 2011C-3911, complete genome. 363. LM651928_0 Shigella flexneri genome assembly NCTC1, chromosome : 1. 364. CP050985_0 Shigella flexneri strain FDAARGOS_716 chromosome. 365. CP034060_0 Shigella flexneri strain FDAARGOS_535 chromosome, complete genome. 366. CP030915_0 Shigella flexneri 2a strain 1508 chromosome. 367. CP012735_0 Shigella flexneri 1a strain 0228, complete genome. 368. CP007037_0 Shigella flexneri G1663, complete genome. 369. CP038180_0 Escherichia coli strain 2 HS-C chromosome, complete genome. 370. CP026641_0 Escherichia coli strain FORC_082 chromosome, complete genome. 371. CP000946_0 Escherichia coli ATCC 8739, complete genome. 372. CP006834_0 Escherichia coli APEC O2-211 chromosome, complete genome. 373. LR134092_0 Escherichia coli strain NCTC10444 genome assembly, chromosome: 1. 374. LR134081_0 Escherichia coli strain NCTC9033 genome assembly, chromosome: 1. 375. CP034953_0 Escherichia coli strain MT102 chromosome, complete genome. 376. CP030240_0 Escherichia coli strain ER1709 chromosome, complete genome. 377. CP028703_0 Escherichia coli strain ME8067 chromosome, complete genome. 378. CP023749_0 Escherichia coli strain RTdelA_B_UU3 chromosome. 379. CP013483_0 Escherichia coli strain Y5, complete genome. 380. CP007594_0 Escherichia coli strain SEC470, complete genome. 381. CP043750_0 Escherichia coli strain CVM N62675 chromosome, complete genome. 382. CP023377_0 Escherichia coli strain 127 chromosome, complete genome. 383. CP010163_0 Escherichia coli strain H2, complete genome. 384. CP026755_0 Escherichia coli strain AR_0077 chromosome, complete genome. 385. CP048337_0 Escherichia coli strain 142 chromosome, complete genome. 386. CP043736_0 Escherichia coli strain CVM N17EC0616 chromosome, complete genome. 387. CP041300_0 Escherichia coli O1:H42 strain CLSC36 chromosome, complete genome. 388. CP035318_0 Escherichia coli strain Ec-2Lar chromosome. 389. CP035317_0 Escherichia coli strain Ec-20Lar chromosome. 390. CP023366_0 Escherichia coli strain 1428 chromosome, complete genome. 391. CP022164_0 Escherichia coli strain M160133 chromosome, complete genome. 392. CP020025_0 Escherichia coli strain WB61 chromosome, complete genome. 393. CP009859_0 Escherichia coli strain ECONIH1, complete genome. 394. CP008697_0 Escherichia coli strain ST648, complete genome. 395. CP026399_0 Escherichia coli strain ECONIH4 chromosome, complete genome. 396. CP022154_0 Escherichia coli strain ABWA45 chromosome, complete genome. 397. CP019778_0 Escherichia coli strain NCTC86 chromosome, complete genome. 398. CP034745_0 Escherichia coli strain L100 chromosome, complete genome. 399. CP034727_0 Escherichia coli strain L41-1 chromosome, complete genome. 400. CP010231_0 Escherichia coli strain S30, complete genome. 401. CP043733_0 Escherichia coli strain CVM N17EC1164 chromosome, complete genome. 402. CP026085_0 Escherichia coli strain DH5alpha chromosome, complete genome. 403. CP006584_0 Escherichia coli LY180, complete genome. 404. CP045977_0 Escherichia coli strain INSC1002 chromosome, complete genome. 405. CP020368_0 Escherichia coli strain BLR(DE3) chromosome, complete genome. 406. CP011938_0 Escherichia coli strain C43(DE3), complete genome. 407. CP010137_0 Escherichia coli strain D2, complete genome. 408. AM946981_0 Escherichia coli BL21(DE3), complete genome. 409. LR134234_0 Escherichia coli strain NCTC8623 genome assembly, chromosome: 1. 410. CP048359_0 Escherichia coli strain 53 chromosome, complete genome. 411. CP027255_0 Escherichia coli strain EC11 chromosome, complete genome. 412. CP012781_0 Escherichia coli strain A18 genome. 413. CP010221_0 Escherichia coli strain M19, complete genome. 414. CP010213_0 Escherichia coli strain M15, complete genome. 415. CP010206_0 Escherichia coli strain M11, complete genome. 416. CP010200_0 Escherichia coli strain M10, complete genome. 417. CP010196_0 Escherichia coli strain M9, complete genome. 418. CP010186_0 Escherichia coli strain M6, complete genome. 419. CP010178_0 Escherichia coli strain H15, complete genome. 420. CP043757_0 Escherichia coli strain CVM N55972 chromosome, complete genome. 421. LN832404_0 Escherichia coli K-12 genome assembly EcoliK12AG100, chromosome : I. 422. LM995446_0 Escherichia coli genome assembly EcRV308Chr, chromosome : 1. 423. LM993812_0 Escherichia coli genome assembly EcHMS174Chr, chromosome : 1. 424. CP049299_0 Escherichia coli strain pV01-18-E02-025-051 chromosome. 425. CP040663_0 Escherichia coli strain EK2009 chromosome, complete genome. 426. CP040643_0 Escherichia coli strain BE104 chromosome, complete genome. 427. CP032667_0 Escherichia coli str. K-12 substr. MG1655 chromosome, complete genome. 428. CP019629_0 Escherichia coli strain MGY chromosome, complete genome. 429. CP012870_0 Escherichia coli strain K-12 substrain MG1655_TMP32XR2, complete genome. 430. CP012869_0 Escherichia coli strain K-12 substrain MG1655_TMP32XR1, complete genome. 431. CP012868_0 Escherichia coli str. K-12 substr. MG1655, complete genome. 432. CP011113_0 Escherichia coli strain RR1, complete genome. 433. CP010445_0 Escherichia coli K-12 strain ER3435, complete genome. 434. CP010444_0 Escherichia coli K-12 strain ER3475, complete genome. 435. CP010443_0 Escherichia coli K-12 strain ER3446, complete genome. 436. CP010442_0 Escherichia coli K-12 strain ER3466, complete genome. 437. CP010441_0 Escherichia coli K-12 strain ER3445, complete genome. 438. CP010440_0 Escherichia coli K-12 strain ER3476, complete genome. 439. CP010439_0 Escherichia coli K-12 strain ER3440, complete genome. 440. CP010438_0 Escherichia coli K-12 strain ER3454, complete genome. 441. CP009685_0 Escherichia coli str. K-12 substr. MG1655, complete genome. 442. CP009644_0 Escherichia coli ER2796, complete genome. 443. CP001637_0 Escherichia coli DH1, complete genome. 444. CP025753_0 Escherichia coli strain CV839-06 chromosome, complete genome. 445. CP030331_0 Escherichia coli strain AR_452 chromosome, complete genome. 446. CP032515_0 Escherichia coli strain 118UI chromosome, complete genome. 447. CP023142_0 Escherichia coli strain CFSAN061770 chromosome, complete genome. 448. CP007491_0 Escherichia coli strain ACN002, complete genome. 449. CP007442_0 Escherichia coli ACN001, complete genome. 450. MG591698_0 Escherichia coli strain PN43 plasmid unnamed, complete sequence. 451. CP029492_0 Escherichia coli strain HS30-1 chromosome, complete genome. 452. CP048647_0 Escherichia coli strain GW-AmxH19 chromosome, complete genome. 453. CP010151_0 Escherichia coli strain D8, complete genome. 454. LR134238_0 Escherichia coli strain NCTC9044 genome assembly, chromosome: 1. 455. FN554766_0 Escherichia coli 042 complete genome. 456. CP040390_0 Escherichia coli strain A1_136 chromosome, complete genome. 457. CP032261_0 Escherichia coli strain AR_0067 chromosome, complete genome. 458. CP029579_0 Escherichia coli strain DA33137 chromosome, complete genome. 459. CP025573_0 Escherichia coli strain E-1246 chromosome, complete genome. 460. CP023820_0 Escherichia coli strain 7/2 chromosome, complete genome. 461. CP023364_0 Escherichia coli strain 144 chromosome, complete genome. 462. CP023353_0 Escherichia coli strain 746 chromosome, complete genome. 463. CP022229_0 Escherichia coli strain WCHEC96200 chromosome, complete genome. 464. CP020516_0 Escherichia coli strain 222 chromosome, complete genome. 465. CP020495_0 Escherichia coli strain 103 chromosome, complete genome. 466. CP018976_0 Escherichia coli strain Ecol_545 chromosome, complete genome. 467. CP018770_0 Escherichia coli strain 2016C-3936C1 chromosome, complete genome. 468. CP018206_0 Escherichia coli strain MRSN346647, complete genome. 469. CP041416_0 Escherichia coli strain STEC711 chromosome, complete genome. 470. CP021722_0 Escherichia coli strain AR_0128, complete genome. 471. CP021535_0 Escherichia coli strain AR_0119, complete genome. 472. CP024821_0 Escherichia coli strain CREC-591 chromosome, complete genome. 473. CP023541_0 Escherichia coli O104:H21 str. CFSAN002236 chromosome, complete genome. 474. CP009106_0 Escherichia coli strain 94-3024, complete genome. 475. CP010122_0 Escherichia coli strain C5, complete genome. 476. CP020753_0 Shigella flexneri 1c strain Y394 chromosome, complete genome. 477. CP010191_0 Escherichia coli strain M8, complete genome. 478. AP021895_0 Escherichia coli 2018-11-3CC DNA, complete genome. 479. CP041520_0 Escherichia coli strain 3057 chromosome. 480. CP021726_0 Escherichia coli strain Combat11I9 chromosome, complete genome. 481. CP041678_0 Escherichia coli strain ESBL 15 chromosome, complete genome. 482. LR134311_0 Escherichia coli strain NCTC9113 genome assembly, chromosome: 1. 483. CP049979_0 Escherichia coli strain IBS28 chromosome, complete genome. 484. CP049936_0 Escherichia coli strain JL05 chromosome, complete genome. 485. CP047876_0 Escherichia coli strain LD22-1 chromosome, complete genome. 486. CP047665_0 Escherichia coli strain LD26-1 chromosome, complete genome. 487. CP044314_0 Escherichia coli strain RM9245 chromosome, complete genome. 488. CP041435_0 Escherichia coli strain STEC309 chromosome, complete genome. 489. CP031898_0 Escherichia coli O113:H21 strain FWSEC0010 chromosome, complete genome. 490. CP031892_0 Escherichia coli O113:H21 strain FWSEC0011 chromosome, complete genome. 491. CP024155_0 Escherichia coli strain 14EC047 chromosome, complete genome. 492. CP019271_0 Escherichia coli strain 13P460A chromosome, complete genome. 493. CP019267_0 Escherichia coli strain 13C1079T chromosome, complete genome. 494. CP015995_0 Escherichia coli strain S51, complete genome. 495. CP012380_0 Escherichia coli strain WAT, complete genome. 496. CP012376_0 Escherichia coli strain GE3, complete genome. 497. CP010117_0 Escherichia coli strain C2, complete genome. 498. CP029747_0 Escherichia coli strain 2016C-3878 chromosome, complete genome. 499. AP017620_0 Escherichia coli DNA, complete genome, strain: MRY15-131. 500. AP017617_0 Escherichia coli DNA, complete genome, strain: MRY15-117. Details: >> 1. CP046527_0 Source: Escherichia coli strain RM19259 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: QGU98108 1227710 1228696 + arabinose-5-phosphate_isomerase_KdsD kdsD QGU98109 1228717 1229283 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QGU98110 1229280 1229855 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QGU98111 1229824 1230381 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QGU98112 1230388 1231113 + LPS_export_ABC_transporter_ATP-binding_protein lptB QGU98113 1231161 1232594 + RNA_polymerase_factor_sigma-54 rpoN QGU98114 1232617 1232904 + ribosome_hibernation_promoting_factor GN312_06700 QGU98115 1233022 1233513 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QGU98116 1233559 1234413 + RNase_adapter_RapZ rapZ QGU98117 1234410 1234682 + PTS_phosphocarrier_protein_NPr npr QGU98118 1234896 1235528 + PhoP_regulatory_network_protein_YrbL yrbL QGU98119 1235525 1236253 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QGU98120 1236250 1236903 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QGU98121 1237133 1239469 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QGU98122 1239565 1240494 - TIGR01212_family_radical_SAM_protein GN312_06740 QGV01928 1241168 1245628 + glutamate_synthase_large_subunit gltB QGU98123 1245641 1247059 + NAD(P)-binding_protein GN312_06750 QGU98124 1247243 1248292 + DUF1016_family_protein GN312_06755 QGU98125 1248352 1248816 - YhcH/YjgK/YiaL_family_protein GN312_06760 QGU98126 1248813 1249688 - ROK_family_protein GN312_06765 QGU98127 1249685 1250374 - putative_N-acetylmannosamine-6-phosphate 2-epimerase GN312_06770 QGU98128 1250422 1251912 - sialic_acid_transporter_NanT nanT QGU98129 1252021 1252914 - N-acetylneuraminate_lyase nanA QGU98130 1253036 1253827 - transcriptional_regulator_NanR nanR QGU98131 1254207 1255571 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QGU98132 1255606 1256103 - ClpXP_protease_specificity-enhancing_factor sspB QGU98133 1256109 1256747 - stringent_starvation_protein_A sspA QGU98134 1257142 1257534 - 30S_ribosomal_protein_S9 rpsI QGU98135 1257550 1257978 - 50S_ribosomal_protein_L13 rplM QGU98136 1258197 1259324 - cell_division_protein_ZapE zapE QGU98137 1259518 1259916 + DUF1043_family_protein GN312_06820 QGU98138 1260070 1261437 + serine_endoprotease_DegQ degQ QGU98139 1261527 1262594 + outer_membrane-stress_sensor_serine endopeptidase DegS degS QGU98140 1262658 1263596 - malate_dehydrogenase mdh QGU98141 1264031 1264501 + transcriptional_regulator_ArgR argR QGU98142 1264866 1265129 + peroxide/acid_stress_response_protein_YhcN yhcN QGU98143 1265185 1265457 - hypothetical_protein GN312_06850 QGU98144 1265549 1267516 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QGU98145 1267522 1268451 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QGU98146 1268459 1268662 - DUF1656_domain-containing_protein GN312_06865 QGU98147 1268845 1269774 + HTH-type_transcriptional_activator_AaeR aaeR QGU98148 1269908 1271353 - metalloprotease_TldD tldD QGU98149 1271509 1275309 - AsmA2_domain-containing_protein GN312_06880 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QGU98124 100 723 100.0 0.0 PJR32595.1 QGU98125 100 318 100.0 6e-109 PJR32596.1 QGU98126 100 570 100.0 0.0 PJR32597.1 QGU98127 100 461 100.0 2e-162 PJR32598.1 QGU98128 100 993 100.0 0.0 PJR32599.1 QGU98129 100 611 100.0 0.0 PJR32600.1 QGU98130 100 537 100.0 0.0 >> 2. CP043539_0 Source: Escherichia coli O157 strain Al Ain chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: QEQ38241 3763433 3764878 + metalloprotease_TldD tldD QEQ38242 3765012 3765941 - HTH-type_transcriptional_activator_AaeR aaeR QEQ38243 3766124 3766327 + DUF1656_domain-containing_protein F0L19_18825 QEQ38244 3766335 3767264 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QEQ38245 3767270 3769237 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QEQ38246 3769329 3769601 + hypothetical_protein F0L19_18840 QEQ38247 3769657 3769920 - peroxide/acid_stress_response_protein_YhcN yhcN QEQ38248 3770285 3770755 - transcriptional_regulator_ArgR argR QEQ38249 3771190 3772128 + malate_dehydrogenase mdh QEQ38250 3772192 3773259 - serine_endoprotease_DegS F0L19_18860 QEQ38251 3773349 3774716 - serine_endoprotease_DegQ degQ QEQ38252 3774870 3775268 - DUF1043_family_protein F0L19_18870 QEQ38253 3775462 3776589 + cell_division_protein_ZapE F0L19_18875 QEQ38254 3776808 3777236 + 50S_ribosomal_protein_L13 rplM QEQ38255 3777252 3777644 + 30S_ribosomal_protein_S9 rpsI QEQ38256 3777562 3777783 - hypothetical_protein F0L19_18890 QEQ38257 3778039 3778677 + stringent_starvation_protein_A sspA QEQ38258 3778683 3779180 + ClpXP_protease_specificity-enhancing_factor sspB QEQ38259 3779215 3780579 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QEQ38260 3780959 3781750 + transcriptional_regulator_NanR nanR QEQ38261 3781872 3782765 + N-acetylneuraminate_lyase nanA QEQ38262 3782874 3784364 + sialic_acid_transporter_NanT nanT QEQ38263 3784412 3785101 + N-acetylmannosamine-6-phosphate_2-epimerase F0L19_18925 QEQ38264 3785098 3785973 + N-acetylmannosamine_kinase F0L19_18930 QEQ38265 3785970 3786434 + DUF386_domain-containing_protein F0L19_18935 QEQ38266 3786494 3787543 - DUF1016_domain-containing_protein F0L19_18940 QEQ38267 3787727 3789145 - NAD(P)-binding_protein F0L19_18945 QEQ39961 3789158 3793618 - glutamate_synthase_large_subunit gltB QEQ38268 3794292 3795221 + TIGR01212_family_radical_SAM_protein F0L19_18955 QEQ38269 3795317 3797653 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QEQ38270 3797883 3798536 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QEQ38271 3798533 3799261 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QEQ38272 3799258 3799890 - PhoP_regulatory_network_protein_YrbL yrbL QEQ38273 3800104 3800376 - PTS_phosphocarrier_protein_NPr npr QEQ38274 3800373 3801227 - RNase_adapter_RapZ rapZ QEQ38275 3801273 3801764 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QEQ38276 3801882 3802169 - ribosome_hibernation_promoting_factor F0L19_18995 QEQ38277 3802192 3803625 - RNA_polymerase_factor_sigma-54 rpoN QEQ38278 3803673 3804398 - LPS_export_ABC_transporter_ATP-binding_protein lptB QEQ38279 3804405 3804962 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QEQ38280 3804931 3805506 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QEQ38281 3805503 3806069 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QEQ38282 3806090 3807076 - arabinose-5-phosphate_isomerase_KdsD kdsD QEQ38283 3807090 3808067 - calcium/sodium_antiporter F0L19_19030 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QEQ38266 100 723 100.0 0.0 PJR32595.1 QEQ38265 100 318 100.0 6e-109 PJR32596.1 QEQ38264 100 570 100.0 0.0 PJR32597.1 QEQ38263 100 461 100.0 2e-162 PJR32598.1 QEQ38262 100 993 100.0 0.0 PJR32599.1 QEQ38261 100 611 100.0 0.0 PJR32600.1 QEQ38260 100 537 100.0 0.0 >> 3. CP040311_0 Source: Escherichia coli strain F3398 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: QFW53346 4746263 4747249 + arabinose-5-phosphate_isomerase_KdsD kdsD QFW53347 4747270 4747836 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QFW53348 4747833 4748408 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFW53349 4748377 4748934 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFW53350 4748941 4749666 + LPS_export_ABC_transporter_ATP-binding_protein lptB QFW53351 4749714 4751147 + RNA_polymerase_factor_sigma-54 rpoN QFW53352 4751170 4751457 + ribosome_hibernation_promoting_factor FEL04_23900 QFW53353 4751575 4752066 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFW53354 4752112 4752966 + RNase_adapter_RapZ rapZ QFW53355 4752963 4753235 + PTS_phosphocarrier_protein_NPr npr QFW53356 4753449 4754081 + PhoP_regulatory_network_protein_YrbL yrbL QFW53357 4754078 4754806 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QFW53358 4754803 4755456 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QFW53359 4755686 4758022 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QFW53360 4758118 4759047 - TIGR01212_family_radical_SAM_protein FEL04_23940 QFW54149 4759721 4764181 + glutamate_synthase_large_subunit gltB QFW53361 4764194 4765612 + glutamate_synthase_small_subunit FEL04_23950 QFW53362 4765796 4766845 + DUF1016_domain-containing_protein FEL04_23955 QFW53363 4766905 4767369 - DUF386_domain-containing_protein FEL04_23960 QFW53364 4767366 4768241 - N-acetylmannosamine_kinase FEL04_23965 QFW53365 4768238 4768927 - N-acetylmannosamine-6-phosphate_2-epimerase FEL04_23970 QFW53366 4768975 4770465 - sialic_acid_transporter_NanT nanT QFW53367 4770574 4771467 - N-acetylneuraminate_lyase nanA QFW53368 4771589 4772380 - transcriptional_regulator_NanR nanR QFW53369 4772760 4774124 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QFW53370 4774159 4774656 - ClpXP_protease_specificity-enhancing_factor sspB QFW53371 4774662 4775300 - stringent_starvation_protein_A sspA QFW53372 4775556 4775777 + hypothetical_protein FEL04_24005 QFW53373 4775695 4776087 - 30S_ribosomal_protein_S9 rpsI QFW53374 4776103 4776531 - 50S_ribosomal_protein_L13 rplM QFW53375 4776750 4777877 - cell_division_protein_ZapE FEL04_24020 QFW53376 4778071 4778469 + DUF1043_family_protein FEL04_24025 QFW53377 4778623 4779990 + serine_endoprotease_DegQ degQ QFW53378 4780080 4781147 + serine_endoprotease_DegS FEL04_24035 QFW53379 4781211 4782149 - malate_dehydrogenase mdh QFW53380 4782584 4783054 + transcriptional_regulator_ArgR argR QFW53381 4783419 4783682 + peroxide/acid_stress_response_protein_YhcN yhcN QFW53382 4783738 4784010 - hypothetical_protein FEL04_24055 QFW53383 4784102 4786069 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFW53384 4786075 4787004 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFW53385 4787012 4787215 - DUF1656_domain-containing_protein FEL04_24070 QFW53386 4787398 4788327 + HTH-type_transcriptional_activator_AaeR aaeR QFW53387 4788461 4789906 - metalloprotease_TldD tldD QFW53388 4790062 4793862 - AsmA2_domain-containing_protein FEL04_24085 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QFW53362 100 723 100.0 0.0 PJR32595.1 QFW53363 100 318 100.0 6e-109 PJR32596.1 QFW53364 100 570 100.0 0.0 PJR32597.1 QFW53365 100 461 100.0 2e-162 PJR32598.1 QFW53366 100 993 100.0 0.0 PJR32599.1 QFW53367 100 611 100.0 0.0 PJR32600.1 QFW53368 100 537 100.0 0.0 >> 4. CP028700_0 Source: Escherichia coli strain 105 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: QCN74049 592196 593641 + metalloprotease_TldD C9E34_03110 QCN74050 593775 594704 - HTH-type_transcriptional_activator_AaeR C9E34_03115 QCN74051 594887 595090 + protein_AaeX C9E34_03120 QCN74052 595098 596027 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E34_03125 QCN74053 596033 598000 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E34_03130 QCN74054 598092 598364 + hypothetical_protein C9E34_03135 QCN74055 598420 598683 - DUF1471_domain-containing_protein C9E34_03140 QCN74056 599048 599518 - arginine_repressor C9E34_03145 QCN74057 599953 600891 + malate_dehydrogenase C9E34_03150 QCN74058 600955 602022 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E34_03155 QCN74059 602112 603479 - serine_endoprotease_DegQ C9E34_03160 QCN74060 603633 604031 - hypothetical_protein C9E34_03165 QCN74061 604225 605352 + cell_division_protein_ZapE C9E34_03170 QCN74062 605571 605999 + 50S_ribosomal_protein_L13 C9E34_03175 QCN74063 606015 606407 + 30S_ribosomal_protein_S9 C9E34_03180 QCN74064 606325 606546 - hypothetical_protein C9E34_03185 QCN78626 606520 606699 + hypothetical_protein C9E34_03190 QCN78625 606651 606860 - hypothetical_protein C9E34_03195 QCN74065 606802 607440 + stringent_starvation_protein_A C9E34_03200 QCN74066 607446 607943 + stringent_starvation_protein_B C9E34_03205 QCN74067 607978 609342 - C4-dicarboxylate_ABC_transporter C9E34_03210 C9E34_03215 609342 609452 + transposase no_locus_tag QCN74068 609722 610513 + transcriptional_regulator_NanR nanR QCN74069 610635 611528 + N-acetylneuraminate_lyase nanA QCN74070 611637 613127 + MFS_transporter C9E34_03230 QCN74071 613175 613864 + N-acetylmannosamine-6-phosphate_2-epimerase C9E34_03235 QCN74072 613861 614736 + N-acetylmannosamine_kinase C9E34_03240 QCN74073 614733 615197 + YhcH/YjgK/YiaL_family_protein C9E34_03245 QCN74074 615257 616306 - DUF1016_domain-containing_protein C9E34_03250 QCN74075 616490 617908 - glutamate_synthase_small_subunit C9E34_03255 QCN74076 617921 622381 - glutamate_synthase_large_subunit C9E34_03260 C9E34_03265 622304 622530 + hypothetical_protein no_locus_tag QCN74077 622428 622664 + hypothetical_protein C9E34_03270 QCN78627 623055 623984 + TIGR01212_family_radical_SAM_protein C9E34_03275 QCN74078 624080 626416 + hybrid_sensor_histidine_kinase/response regulator C9E34_03280 QCN74079 626646 627299 + isoprenoid_biosynthesis_protein_ElbB C9E34_03285 QCN74080 627296 628024 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E34_03290 QCN74081 628021 628653 - protein_YrbL yrbL QCN74082 628867 629139 - phosphocarrier_protein_NPr C9E34_03300 QCN74083 629136 629990 - RNase_adaptor_protein_RapZ C9E34_03305 QCN74084 630036 630527 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E34_03310 QCN74085 630645 630932 - ribosome_hibernation_promoting_factor C9E34_03315 QCN74086 630955 632388 - RNA_polymerase_sigma-54_factor C9E34_03320 QCN74087 632436 633161 - ABC_transporter_ATP-binding_protein C9E34_03325 QCN74088 633168 633725 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E34_03330 QCN74089 633694 634269 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCN74090 634266 634832 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCN74091 634853 635839 - arabinose_5-phosphate_isomerase_KdsD C9E34_03345 QCN74092 635853 636830 - calcium/sodium_antiporter C9E34_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCN74074 100 723 100.0 0.0 PJR32595.1 QCN74073 100 318 100.0 6e-109 PJR32596.1 QCN74072 100 570 100.0 0.0 PJR32597.1 QCN74071 100 461 100.0 2e-162 PJR32598.1 QCN74070 100 993 100.0 0.0 PJR32599.1 QCN74069 100 611 100.0 0.0 PJR32600.1 QCN74068 100 537 100.0 0.0 >> 5. CP028698_0 Source: Escherichia coli strain 106 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: QCN68596 593504 594949 + metalloprotease_TldD C9E35_03120 QCN68597 595083 596012 - HTH-type_transcriptional_activator_AaeR C9E35_03125 QCN68598 596195 596398 + protein_AaeX C9E35_03130 QCN68599 596406 597335 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E35_03135 QCN68600 597341 599308 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E35_03140 QCN68601 599400 599672 + hypothetical_protein C9E35_03145 QCN68602 599728 599991 - DUF1471_domain-containing_protein C9E35_03150 QCN68603 600356 600826 - arginine_repressor C9E35_03155 QCN68604 601261 602199 + malate_dehydrogenase C9E35_03160 QCN68605 602263 603330 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E35_03165 QCN68606 603420 604787 - serine_endoprotease_DegQ C9E35_03170 QCN68607 604941 605339 - hypothetical_protein C9E35_03175 QCN68608 605533 606660 + cell_division_protein_ZapE C9E35_03180 QCN68609 606879 607307 + 50S_ribosomal_protein_L13 C9E35_03185 QCN68610 607323 607715 + 30S_ribosomal_protein_S9 C9E35_03190 QCN68611 607633 607854 - hypothetical_protein C9E35_03195 QCN73153 607828 608007 + hypothetical_protein C9E35_03200 QCN73152 607959 608168 - hypothetical_protein C9E35_03205 QCN68612 608110 608748 + stringent_starvation_protein_A C9E35_03210 QCN68613 608754 609251 + stringent_starvation_protein_B C9E35_03215 QCN68614 609286 610650 - C4-dicarboxylate_ABC_transporter C9E35_03220 C9E35_03225 610650 610760 + transposase no_locus_tag QCN68615 611030 611821 + transcriptional_regulator_NanR nanR QCN68616 611943 612836 + N-acetylneuraminate_lyase nanA QCN68617 612945 614435 + MFS_transporter C9E35_03240 QCN68618 614483 615172 + N-acetylmannosamine-6-phosphate_2-epimerase C9E35_03245 QCN68619 615169 616044 + N-acetylmannosamine_kinase C9E35_03250 QCN68620 616041 616505 + YhcH/YjgK/YiaL_family_protein C9E35_03255 QCN68621 616565 617614 - DUF1016_domain-containing_protein C9E35_03260 QCN68622 617798 619216 - glutamate_synthase_small_subunit C9E35_03265 QCN68623 619229 623689 - glutamate_synthase_large_subunit C9E35_03270 C9E35_03275 623612 623838 + hypothetical_protein no_locus_tag QCN68624 623736 623972 + hypothetical_protein C9E35_03280 QCN73154 624363 625292 + TIGR01212_family_radical_SAM_protein C9E35_03285 QCN68625 625388 627724 + hybrid_sensor_histidine_kinase/response regulator C9E35_03290 QCN68626 627954 628607 + isoprenoid_biosynthesis_protein_ElbB C9E35_03295 QCN68627 628604 629332 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E35_03300 QCN68628 629329 629961 - protein_YrbL yrbL QCN68629 630175 630447 - phosphocarrier_protein_NPr C9E35_03310 QCN68630 630444 631298 - RNase_adaptor_protein_RapZ C9E35_03315 QCN68631 631344 631835 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E35_03320 QCN68632 631953 632240 - ribosome_hibernation_promoting_factor C9E35_03325 QCN68633 632263 633696 - RNA_polymerase_sigma-54_factor C9E35_03330 QCN68634 633744 634469 - ABC_transporter_ATP-binding_protein C9E35_03335 QCN68635 634476 635033 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E35_03340 QCN68636 635002 635577 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCN68637 635574 636140 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCN68638 636161 637147 - arabinose_5-phosphate_isomerase_KdsD C9E35_03355 QCN68639 637161 638138 - calcium/sodium_antiporter C9E35_03360 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCN68621 100 723 100.0 0.0 PJR32595.1 QCN68620 100 318 100.0 6e-109 PJR32596.1 QCN68619 100 570 100.0 0.0 PJR32597.1 QCN68618 100 461 100.0 2e-162 PJR32598.1 QCN68617 100 993 100.0 0.0 PJR32599.1 QCN68616 100 611 100.0 0.0 PJR32600.1 QCN68615 100 537 100.0 0.0 >> 6. CP028695_0 Source: Escherichia coli strain 107 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: QCN63120 592194 593639 + metalloprotease_TldD C9E36_03110 QCN63121 593773 594702 - HTH-type_transcriptional_activator_AaeR C9E36_03115 QCN63122 594885 595088 + protein_AaeX C9E36_03120 QCN63123 595096 596025 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E36_03125 QCN63124 596031 597998 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E36_03130 QCN63125 598090 598362 + hypothetical_protein C9E36_03135 QCN63126 598418 598681 - DUF1471_domain-containing_protein C9E36_03140 QCN63127 599046 599516 - arginine_repressor C9E36_03145 QCN63128 599951 600889 + malate_dehydrogenase C9E36_03150 QCN63129 600953 602020 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E36_03155 QCN63130 602110 603477 - serine_endoprotease_DegQ C9E36_03160 QCN63131 603631 604029 - hypothetical_protein C9E36_03165 QCN63132 604223 605350 + cell_division_protein_ZapE C9E36_03170 QCN63133 605569 605997 + 50S_ribosomal_protein_L13 C9E36_03175 QCN63134 606013 606405 + 30S_ribosomal_protein_S9 C9E36_03180 QCN63135 606323 606544 - hypothetical_protein C9E36_03185 QCN67686 606518 606697 + hypothetical_protein C9E36_03190 QCN67685 606649 606858 - hypothetical_protein C9E36_03195 QCN63136 606800 607438 + stringent_starvation_protein_A C9E36_03200 QCN63137 607444 607941 + stringent_starvation_protein_B C9E36_03205 QCN63138 607976 609340 - C4-dicarboxylate_ABC_transporter C9E36_03210 C9E36_03215 609340 609450 + transposase no_locus_tag QCN63139 609720 610511 + transcriptional_regulator_NanR nanR QCN63140 610633 611526 + N-acetylneuraminate_lyase nanA QCN63141 611635 613125 + MFS_transporter C9E36_03230 QCN63142 613173 613862 + N-acetylmannosamine-6-phosphate_2-epimerase C9E36_03235 QCN63143 613859 614734 + N-acetylmannosamine_kinase C9E36_03240 QCN63144 614731 615195 + YhcH/YjgK/YiaL_family_protein C9E36_03245 QCN63145 615255 616304 - DUF1016_domain-containing_protein C9E36_03250 QCN63146 616488 617906 - glutamate_synthase_small_subunit C9E36_03255 QCN63147 617919 622379 - glutamate_synthase_large_subunit C9E36_03260 C9E36_03265 622302 622528 + hypothetical_protein no_locus_tag QCN63148 622426 622662 + hypothetical_protein C9E36_03270 QCN67687 623053 623982 + TIGR01212_family_radical_SAM_protein C9E36_03275 QCN63149 624078 626414 + hybrid_sensor_histidine_kinase/response regulator C9E36_03280 QCN63150 626644 627297 + isoprenoid_biosynthesis_protein_ElbB C9E36_03285 QCN63151 627294 628022 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E36_03290 QCN63152 628019 628651 - protein_YrbL yrbL QCN63153 628865 629137 - phosphocarrier_protein_NPr C9E36_03300 QCN63154 629134 629988 - RNase_adaptor_protein_RapZ C9E36_03305 QCN63155 630034 630525 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E36_03310 QCN63156 630643 630930 - ribosome_hibernation_promoting_factor C9E36_03315 QCN63157 630953 632386 - RNA_polymerase_sigma-54_factor C9E36_03320 QCN63158 632434 633159 - ABC_transporter_ATP-binding_protein C9E36_03325 QCN63159 633166 633723 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E36_03330 QCN63160 633692 634267 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCN63161 634264 634830 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCN63162 634851 635837 - arabinose_5-phosphate_isomerase_KdsD C9E36_03345 QCN63163 635851 636828 - calcium/sodium_antiporter C9E36_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCN63145 100 723 100.0 0.0 PJR32595.1 QCN63144 100 318 100.0 6e-109 PJR32596.1 QCN63143 100 570 100.0 0.0 PJR32597.1 QCN63142 100 461 100.0 2e-162 PJR32598.1 QCN63141 100 993 100.0 0.0 PJR32599.1 QCN63140 100 611 100.0 0.0 PJR32600.1 QCN63139 100 537 100.0 0.0 >> 7. CP028693_0 Source: Escherichia coli strain 108 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: QCN57634 592191 593636 + metalloprotease_TldD C9E37_03105 QCN57635 593770 594699 - HTH-type_transcriptional_activator_AaeR C9E37_03110 QCN57636 594882 595085 + protein_AaeX C9E37_03115 QCN57637 595093 596022 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E37_03120 QCN57638 596028 597995 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E37_03125 QCN57639 598087 598359 + hypothetical_protein C9E37_03130 QCN57640 598415 598678 - DUF1471_domain-containing_protein C9E37_03135 QCN57641 599043 599513 - arginine_repressor C9E37_03140 QCN57642 599948 600886 + malate_dehydrogenase C9E37_03145 QCN57643 600950 602017 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E37_03150 QCN57644 602107 603474 - serine_endoprotease_DegQ C9E37_03155 QCN57645 603628 604026 - hypothetical_protein C9E37_03160 QCN57646 604220 605347 + cell_division_protein_ZapE C9E37_03165 QCN57647 605566 605994 + 50S_ribosomal_protein_L13 C9E37_03170 QCN57648 606010 606402 + 30S_ribosomal_protein_S9 C9E37_03175 QCN57649 606320 606541 - hypothetical_protein C9E37_03180 QCN62219 606515 606694 + hypothetical_protein C9E37_03185 QCN62218 606646 606855 - hypothetical_protein C9E37_03190 QCN57650 606797 607435 + stringent_starvation_protein_A C9E37_03195 QCN57651 607441 607938 + stringent_starvation_protein_B C9E37_03200 QCN57652 607973 609337 - C4-dicarboxylate_ABC_transporter C9E37_03205 C9E37_03210 609337 609447 + transposase no_locus_tag QCN57653 609717 610508 + transcriptional_regulator_NanR nanR QCN57654 610630 611523 + N-acetylneuraminate_lyase nanA QCN57655 611632 613122 + MFS_transporter C9E37_03225 QCN57656 613170 613859 + N-acetylmannosamine-6-phosphate_2-epimerase C9E37_03230 QCN57657 613856 614731 + N-acetylmannosamine_kinase C9E37_03235 QCN57658 614728 615192 + YhcH/YjgK/YiaL_family_protein C9E37_03240 QCN57659 615252 616301 - DUF1016_domain-containing_protein C9E37_03245 QCN57660 616485 617903 - glutamate_synthase_small_subunit C9E37_03250 QCN57661 617916 622376 - glutamate_synthase_large_subunit C9E37_03255 C9E37_03260 622299 622525 + hypothetical_protein no_locus_tag QCN57662 622423 622659 + hypothetical_protein C9E37_03265 QCN62220 623050 623979 + TIGR01212_family_radical_SAM_protein C9E37_03270 QCN57663 624075 626411 + hybrid_sensor_histidine_kinase/response regulator C9E37_03275 QCN57664 626641 627294 + isoprenoid_biosynthesis_protein_ElbB C9E37_03280 QCN57665 627291 628019 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E37_03285 QCN57666 628016 628648 - protein_YrbL yrbL QCN57667 628862 629134 - phosphocarrier_protein_NPr C9E37_03295 QCN57668 629131 629985 - RNase_adaptor_protein_RapZ C9E37_03300 QCN57669 630031 630522 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E37_03305 QCN57670 630640 630927 - ribosome_hibernation_promoting_factor C9E37_03310 QCN57671 630950 632383 - RNA_polymerase_sigma-54_factor C9E37_03315 QCN57672 632431 633156 - ABC_transporter_ATP-binding_protein C9E37_03320 QCN57673 633163 633720 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E37_03325 QCN57674 633689 634264 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCN57675 634261 634827 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCN57676 634848 635834 - arabinose_5-phosphate_isomerase_KdsD C9E37_03340 QCN57677 635848 636825 - calcium/sodium_antiporter C9E37_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCN57659 100 723 100.0 0.0 PJR32595.1 QCN57658 100 318 100.0 6e-109 PJR32596.1 QCN57657 100 570 100.0 0.0 PJR32597.1 QCN57656 100 461 100.0 2e-162 PJR32598.1 QCN57655 100 993 100.0 0.0 PJR32599.1 QCN57654 100 611 100.0 0.0 PJR32600.1 QCN57653 100 537 100.0 0.0 >> 8. CP028690_0 Source: Escherichia coli strain 109 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: QCN52160 592194 593639 + metalloprotease_TldD C9E38_03110 QCN52161 593773 594702 - HTH-type_transcriptional_activator_AaeR C9E38_03115 QCN52162 594885 595088 + protein_AaeX C9E38_03120 QCN52163 595096 596025 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E38_03125 QCN52164 596031 597998 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E38_03130 QCN52165 598090 598362 + hypothetical_protein C9E38_03135 QCN52166 598418 598681 - DUF1471_domain-containing_protein C9E38_03140 QCN52167 599046 599516 - arginine_repressor C9E38_03145 QCN52168 599951 600889 + malate_dehydrogenase C9E38_03150 QCN52169 600953 602020 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E38_03155 QCN52170 602110 603477 - serine_endoprotease_DegQ C9E38_03160 QCN52171 603631 604029 - hypothetical_protein C9E38_03165 QCN52172 604223 605350 + cell_division_protein_ZapE C9E38_03170 QCN52173 605569 605997 + 50S_ribosomal_protein_L13 C9E38_03175 QCN52174 606013 606405 + 30S_ribosomal_protein_S9 C9E38_03180 QCN52175 606323 606544 - hypothetical_protein C9E38_03185 QCN56727 606518 606697 + hypothetical_protein C9E38_03190 QCN56726 606649 606858 - hypothetical_protein C9E38_03195 QCN52176 606800 607438 + stringent_starvation_protein_A C9E38_03200 QCN52177 607444 607941 + stringent_starvation_protein_B C9E38_03205 QCN52178 607976 609340 - C4-dicarboxylate_ABC_transporter C9E38_03210 C9E38_03215 609340 609450 + transposase no_locus_tag QCN52179 609720 610511 + transcriptional_regulator_NanR nanR QCN52180 610633 611526 + N-acetylneuraminate_lyase nanA QCN52181 611635 613125 + MFS_transporter C9E38_03230 QCN52182 613173 613862 + N-acetylmannosamine-6-phosphate_2-epimerase C9E38_03235 QCN52183 613859 614734 + N-acetylmannosamine_kinase C9E38_03240 QCN52184 614731 615195 + YhcH/YjgK/YiaL_family_protein C9E38_03245 QCN52185 615255 616304 - DUF1016_domain-containing_protein C9E38_03250 QCN52186 616488 617906 - glutamate_synthase_small_subunit C9E38_03255 QCN52187 617919 622379 - glutamate_synthase_large_subunit C9E38_03260 C9E38_03265 622302 622528 + hypothetical_protein no_locus_tag QCN52188 622426 622662 + hypothetical_protein C9E38_03270 QCN56728 623053 623982 + TIGR01212_family_radical_SAM_protein C9E38_03275 QCN52189 624078 626414 + hybrid_sensor_histidine_kinase/response regulator C9E38_03280 QCN52190 626644 627297 + isoprenoid_biosynthesis_protein_ElbB C9E38_03285 QCN52191 627294 628022 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E38_03290 QCN52192 628019 628651 - protein_YrbL yrbL QCN52193 628865 629137 - phosphocarrier_protein_NPr C9E38_03300 QCN52194 629134 629988 - RNase_adaptor_protein_RapZ C9E38_03305 QCN52195 630034 630525 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E38_03310 QCN52196 630643 630930 - ribosome_hibernation_promoting_factor C9E38_03315 QCN52197 630953 632386 - RNA_polymerase_sigma-54_factor C9E38_03320 QCN52198 632434 633159 - ABC_transporter_ATP-binding_protein C9E38_03325 QCN52199 633166 633723 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E38_03330 QCN52200 633692 634267 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCN52201 634264 634830 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCN52202 634851 635837 - arabinose_5-phosphate_isomerase_KdsD C9E38_03345 QCN52203 635851 636828 - calcium/sodium_antiporter C9E38_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCN52185 100 723 100.0 0.0 PJR32595.1 QCN52184 100 318 100.0 6e-109 PJR32596.1 QCN52183 100 570 100.0 0.0 PJR32597.1 QCN52182 100 461 100.0 2e-162 PJR32598.1 QCN52181 100 993 100.0 0.0 PJR32599.1 QCN52180 100 611 100.0 0.0 PJR32600.1 QCN52179 100 537 100.0 0.0 >> 9. CP028687_0 Source: Escherichia coli strain 110 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: QCN46685 592194 593639 + metalloprotease_TldD C9E39_03105 QCN46686 593773 594702 - HTH-type_transcriptional_activator_AaeR C9E39_03110 QCN46687 594885 595088 + protein_AaeX C9E39_03115 QCN46688 595096 596025 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E39_03120 QCN46689 596031 597998 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E39_03125 QCN46690 598090 598362 + hypothetical_protein C9E39_03130 QCN46691 598418 598681 - DUF1471_domain-containing_protein C9E39_03135 QCN46692 599046 599516 - arginine_repressor C9E39_03140 QCN46693 599951 600889 + malate_dehydrogenase C9E39_03145 QCN46694 600953 602020 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E39_03150 QCN46695 602110 603477 - serine_endoprotease_DegQ C9E39_03155 QCN46696 603631 604029 - hypothetical_protein C9E39_03160 QCN46697 604223 605350 + cell_division_protein_ZapE C9E39_03165 QCN46698 605569 605997 + 50S_ribosomal_protein_L13 C9E39_03170 QCN46699 606013 606405 + 30S_ribosomal_protein_S9 C9E39_03175 QCN46700 606323 606544 - hypothetical_protein C9E39_03180 QCN51249 606518 606697 + hypothetical_protein C9E39_03185 QCN51248 606649 606858 - hypothetical_protein C9E39_03190 QCN46701 606800 607438 + stringent_starvation_protein_A C9E39_03195 QCN46702 607444 607941 + stringent_starvation_protein_B C9E39_03200 QCN46703 607976 609340 - C4-dicarboxylate_ABC_transporter C9E39_03205 C9E39_03210 609340 609450 + transposase no_locus_tag QCN46704 609720 610511 + transcriptional_regulator_NanR nanR QCN46705 610633 611526 + N-acetylneuraminate_lyase nanA QCN46706 611635 613125 + MFS_transporter C9E39_03225 QCN46707 613173 613862 + N-acetylmannosamine-6-phosphate_2-epimerase C9E39_03230 QCN46708 613859 614734 + N-acetylmannosamine_kinase C9E39_03235 QCN46709 614731 615195 + YhcH/YjgK/YiaL_family_protein C9E39_03240 QCN46710 615255 616304 - DUF1016_domain-containing_protein C9E39_03245 QCN46711 616488 617906 - glutamate_synthase_small_subunit C9E39_03250 QCN46712 617919 622379 - glutamate_synthase_large_subunit C9E39_03255 C9E39_03260 622302 622528 + hypothetical_protein no_locus_tag QCN46713 622426 622662 + hypothetical_protein C9E39_03265 QCN51250 623053 623982 + TIGR01212_family_radical_SAM_protein C9E39_03270 QCN46714 624078 626414 + hybrid_sensor_histidine_kinase/response regulator C9E39_03275 QCN46715 626644 627297 + isoprenoid_biosynthesis_protein_ElbB C9E39_03280 QCN46716 627294 628022 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E39_03285 QCN46717 628019 628651 - protein_YrbL yrbL QCN46718 628865 629137 - phosphocarrier_protein_NPr C9E39_03295 QCN46719 629134 629988 - RNase_adaptor_protein_RapZ C9E39_03300 QCN46720 630034 630525 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E39_03305 QCN46721 630643 630930 - ribosome_hibernation_promoting_factor C9E39_03310 QCN46722 630953 632386 - RNA_polymerase_sigma-54_factor C9E39_03315 QCN46723 632434 633159 - ABC_transporter_ATP-binding_protein C9E39_03320 QCN46724 633166 633723 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E39_03325 QCN46725 633692 634267 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCN46726 634264 634830 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCN46727 634851 635837 - arabinose_5-phosphate_isomerase_KdsD C9E39_03340 QCN46728 635851 636828 - calcium/sodium_antiporter C9E39_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCN46710 100 723 100.0 0.0 PJR32595.1 QCN46709 100 318 100.0 6e-109 PJR32596.1 QCN46708 100 570 100.0 0.0 PJR32597.1 QCN46707 100 461 100.0 2e-162 PJR32598.1 QCN46706 100 993 100.0 0.0 PJR32599.1 QCN46705 100 611 100.0 0.0 PJR32600.1 QCN46704 100 537 100.0 0.0 >> 10. CP028685_0 Source: Escherichia coli strain 111 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: QCN41138 591918 593363 + metalloprotease_TldD C9E40_03115 QCN41139 593497 594426 - HTH-type_transcriptional_activator_AaeR C9E40_03120 QCN41140 594609 594812 + DUF1656_domain-containing_protein C9E40_03125 QCN41141 594820 595749 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E40_03130 QCN41142 595755 597722 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E40_03135 QCN41143 597814 598086 + hypothetical_protein C9E40_03140 QCN41144 598142 598405 - DUF1471_domain-containing_protein C9E40_03145 QCN41145 598770 599240 - arginine_repressor C9E40_03150 QCN41146 599675 600613 + malate_dehydrogenase C9E40_03155 QCN41147 600677 601744 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E40_03160 QCN41148 601834 603201 - serine_endoprotease_DegQ C9E40_03165 QCN41149 603355 603753 - DUF1043_domain-containing_protein C9E40_03170 QCN41150 603947 605074 + cell_division_protein_ZapE C9E40_03175 QCN41151 605293 605721 + 50S_ribosomal_protein_L13 C9E40_03180 QCN41152 605737 606129 + 30S_ribosomal_protein_S9 C9E40_03185 QCN41153 606047 606268 - hypothetical_protein C9E40_03190 QCN45784 606242 606421 + hypothetical_protein C9E40_03195 QCN45783 606373 606582 - hypothetical_protein C9E40_03200 QCN41154 606524 607162 + stringent_starvation_protein_A C9E40_03205 QCN41155 607168 607665 + stringent_starvation_protein_B C9E40_03210 QCN41156 607700 609064 - C4-dicarboxylate_transporter_DcuC C9E40_03215 C9E40_03220 609064 609174 + transposase no_locus_tag QCN41157 609444 610235 + transcriptional_regulator_NanR nanR QCN41158 610357 611250 + N-acetylneuraminate_lyase nanA QCN41159 611359 612849 + MFS_transporter C9E40_03235 QCN41160 612897 613586 + N-acetylmannosamine-6-phosphate_2-epimerase C9E40_03240 QCN41161 613583 614458 + N-acetylmannosamine_kinase C9E40_03245 QCN41162 614455 614919 + YhcH/YjgK/YiaL_family_protein C9E40_03250 QCN41163 614979 616028 - DUF1016_domain-containing_protein C9E40_03255 QCN41164 616212 617630 - glutamate_synthase_small_subunit C9E40_03260 QCN41165 617643 622103 - glutamate_synthase_large_subunit C9E40_03265 C9E40_03270 622026 622252 + hypothetical_protein no_locus_tag QCN41166 622150 622386 + hypothetical_protein C9E40_03275 QCN45785 622777 623706 + TIGR01212_family_radical_SAM_protein C9E40_03280 QCN41167 623802 626138 + hybrid_sensor_histidine_kinase/response regulator C9E40_03285 QCN41168 626368 627021 + isoprenoid_biosynthesis_protein_ElbB C9E40_03290 QCN41169 627018 627746 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E40_03295 QCN41170 627743 628375 - PhoP_regulatory_network_protein_YrbL C9E40_03300 QCN41171 628589 628861 - phosphocarrier_protein_NPr C9E40_03305 QCN41172 628858 629712 - RNase_adaptor_protein_RapZ C9E40_03310 QCN41173 629758 630249 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E40_03315 QCN41174 630367 630654 - ribosome_hibernation_promoting_factor C9E40_03320 QCN41175 630677 632110 - RNA_polymerase_sigma-54_factor C9E40_03325 QCN41176 632158 632883 - ABC_transporter_ATP-binding_protein C9E40_03330 QCN41177 632890 633447 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E40_03335 QCN41178 633416 633991 - LPS_export_ABC_transporter_periplasmic_protein LptC C9E40_03340 QCN41179 633988 634554 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCN41180 634575 635561 - arabinose_5-phosphate_isomerase_KdsD C9E40_03350 QCN41181 635575 636552 - calcium/sodium_antiporter C9E40_03355 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCN41163 100 723 100.0 0.0 PJR32595.1 QCN41162 100 318 100.0 6e-109 PJR32596.1 QCN41161 100 570 100.0 0.0 PJR32597.1 QCN41160 100 461 100.0 2e-162 PJR32598.1 QCN41159 100 993 100.0 0.0 PJR32599.1 QCN41158 100 611 100.0 0.0 PJR32600.1 QCN41157 100 537 100.0 0.0 >> 11. CP028683_0 Source: Escherichia coli strain 112 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: QCN35587 591918 593363 + metalloprotease_TldD C9E41_03115 QCN35588 593497 594426 - HTH-type_transcriptional_activator_AaeR C9E41_03120 QCN35589 594609 594812 + DUF1656_domain-containing_protein C9E41_03125 QCN35590 594820 595749 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E41_03130 QCN35591 595755 597722 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E41_03135 QCN35592 597814 598086 + hypothetical_protein C9E41_03140 QCN35593 598142 598405 - DUF1471_domain-containing_protein C9E41_03145 QCN35594 598770 599240 - arginine_repressor C9E41_03150 QCN35595 599675 600613 + malate_dehydrogenase C9E41_03155 QCN35596 600677 601744 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E41_03160 QCN35597 601834 603201 - serine_endoprotease_DegQ C9E41_03165 QCN35598 603355 603753 - DUF1043_domain-containing_protein C9E41_03170 QCN35599 603947 605074 + cell_division_protein_ZapE C9E41_03175 QCN35600 605293 605721 + 50S_ribosomal_protein_L13 C9E41_03180 QCN35601 605737 606129 + 30S_ribosomal_protein_S9 C9E41_03185 QCN35602 606047 606268 - hypothetical_protein C9E41_03190 QCN40230 606242 606421 + hypothetical_protein C9E41_03195 QCN40229 606373 606582 - hypothetical_protein C9E41_03200 QCN35603 606524 607162 + stringent_starvation_protein_A C9E41_03205 QCN35604 607168 607665 + stringent_starvation_protein_B C9E41_03210 QCN35605 607700 609064 - C4-dicarboxylate_transporter_DcuC C9E41_03215 C9E41_03220 609064 609174 + transposase no_locus_tag QCN35606 609444 610235 + transcriptional_regulator_NanR nanR QCN35607 610357 611250 + N-acetylneuraminate_lyase nanA QCN35608 611359 612849 + MFS_transporter C9E41_03235 QCN35609 612897 613586 + N-acetylmannosamine-6-phosphate_2-epimerase C9E41_03240 QCN35610 613583 614458 + N-acetylmannosamine_kinase C9E41_03245 QCN35611 614455 614919 + YhcH/YjgK/YiaL_family_protein C9E41_03250 QCN35612 614979 616028 - DUF1016_domain-containing_protein C9E41_03255 QCN35613 616212 617630 - glutamate_synthase_small_subunit C9E41_03260 QCN35614 617643 622103 - glutamate_synthase_large_subunit C9E41_03265 C9E41_03270 622026 622252 + hypothetical_protein no_locus_tag QCN35615 622150 622386 + hypothetical_protein C9E41_03275 QCN40231 622777 623706 + TIGR01212_family_radical_SAM_protein C9E41_03280 QCN35616 623802 626138 + hybrid_sensor_histidine_kinase/response regulator C9E41_03285 QCN35617 626368 627021 + isoprenoid_biosynthesis_protein_ElbB C9E41_03290 QCN35618 627018 627746 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E41_03295 QCN35619 627743 628375 - PhoP_regulatory_network_protein_YrbL C9E41_03300 QCN35620 628589 628861 - phosphocarrier_protein_NPr C9E41_03305 QCN35621 628858 629712 - RNase_adaptor_protein_RapZ C9E41_03310 QCN35622 629758 630249 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E41_03315 QCN35623 630367 630654 - ribosome_hibernation_promoting_factor C9E41_03320 QCN35624 630677 632110 - RNA_polymerase_sigma-54_factor C9E41_03325 QCN35625 632158 632883 - ABC_transporter_ATP-binding_protein C9E41_03330 QCN35626 632890 633447 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E41_03335 QCN35627 633416 633991 - LPS_export_ABC_transporter_periplasmic_protein LptC C9E41_03340 QCN35628 633988 634554 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCN35629 634575 635561 - arabinose_5-phosphate_isomerase_KdsD C9E41_03350 QCN35630 635575 636552 - calcium/sodium_antiporter C9E41_03355 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCN35612 100 723 100.0 0.0 PJR32595.1 QCN35611 100 318 100.0 6e-109 PJR32596.1 QCN35610 100 570 100.0 0.0 PJR32597.1 QCN35609 100 461 100.0 2e-162 PJR32598.1 QCN35608 100 993 100.0 0.0 PJR32599.1 QCN35607 100 611 100.0 0.0 PJR32600.1 QCN35606 100 537 100.0 0.0 >> 12. CP028654_0 Source: Escherichia coli strain 122 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: QCM80793 592175 593620 + metalloprotease_TldD C9E51_03110 QCM80794 593754 594683 - HTH-type_transcriptional_activator_AaeR C9E51_03115 QCM80795 594866 595069 + protein_AaeX C9E51_03120 QCM80796 595077 596006 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E51_03125 QCM80797 596012 597979 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E51_03130 QCM80798 598071 598343 + hypothetical_protein C9E51_03135 QCM80799 598399 598662 - DUF1471_domain-containing_protein C9E51_03140 QCM80800 599027 599497 - arginine_repressor C9E51_03145 QCM80801 599932 600870 + malate_dehydrogenase C9E51_03150 QCM80802 600934 602001 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E51_03155 QCM80803 602091 603458 - serine_endoprotease_DegQ C9E51_03160 QCM80804 603612 604010 - hypothetical_protein C9E51_03165 QCM80805 604204 605331 + cell_division_protein_ZapE C9E51_03170 QCM80806 605550 605978 + 50S_ribosomal_protein_L13 C9E51_03175 QCM80807 605994 606386 + 30S_ribosomal_protein_S9 C9E51_03180 QCM80808 606304 606525 - hypothetical_protein C9E51_03185 QCM85369 606499 606678 + hypothetical_protein C9E51_03190 QCM85368 606630 606839 - hypothetical_protein C9E51_03195 QCM80809 606781 607419 + stringent_starvation_protein_A C9E51_03200 QCM80810 607425 607922 + stringent_starvation_protein_B C9E51_03205 QCM80811 607957 609321 - C4-dicarboxylate_ABC_transporter C9E51_03210 C9E51_03215 609321 609431 + transposase no_locus_tag QCM80812 609701 610492 + transcriptional_regulator_NanR nanR QCM80813 610614 611507 + N-acetylneuraminate_lyase nanA QCM80814 611616 613106 + MFS_transporter C9E51_03230 QCM80815 613154 613843 + N-acetylmannosamine-6-phosphate_2-epimerase C9E51_03235 QCM80816 613840 614715 + N-acetylmannosamine_kinase C9E51_03240 QCM80817 614712 615176 + YhcH/YjgK/YiaL_family_protein C9E51_03245 QCM80818 615236 616285 - DUF1016_domain-containing_protein C9E51_03250 QCM80819 616469 617887 - glutamate_synthase_small_subunit C9E51_03255 QCM80820 617900 622360 - glutamate_synthase_large_subunit C9E51_03260 C9E51_03265 622283 622509 + hypothetical_protein no_locus_tag QCM80821 622407 622643 + hypothetical_protein C9E51_03270 QCM85370 623034 623963 + TIGR01212_family_radical_SAM_protein C9E51_03275 QCM80822 624059 626395 + hybrid_sensor_histidine_kinase/response regulator C9E51_03280 QCM80823 626625 627278 + isoprenoid_biosynthesis_protein_ElbB C9E51_03285 QCM80824 627275 628003 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E51_03290 QCM80825 628000 628632 - protein_YrbL yrbL QCM80826 628846 629118 - phosphocarrier_protein_NPr C9E51_03300 QCM80827 629115 629969 - RNase_adaptor_protein_RapZ C9E51_03305 QCM80828 630015 630506 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E51_03310 QCM80829 630624 630911 - ribosome_hibernation_promoting_factor C9E51_03315 QCM80830 630934 632367 - RNA_polymerase_sigma-54_factor C9E51_03320 QCM80831 632415 633140 - ABC_transporter_ATP-binding_protein C9E51_03325 QCM80832 633147 633704 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E51_03330 QCM80833 633673 634248 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCM80834 634245 634811 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM80835 634832 635818 - arabinose_5-phosphate_isomerase_KdsD C9E51_03345 QCM80836 635832 636809 - calcium/sodium_antiporter C9E51_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM80818 100 723 100.0 0.0 PJR32595.1 QCM80817 100 318 100.0 6e-109 PJR32596.1 QCM80816 100 570 100.0 0.0 PJR32597.1 QCM80815 100 461 100.0 2e-162 PJR32598.1 QCM80814 100 993 100.0 0.0 PJR32599.1 QCM80813 100 611 100.0 0.0 PJR32600.1 QCM80812 100 537 100.0 0.0 >> 13. CP028652_0 Source: Escherichia coli strain 123 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: QCM75319 592191 593636 + metalloprotease_TldD C9E52_03105 QCM75320 593770 594699 - HTH-type_transcriptional_activator_AaeR C9E52_03110 QCM75321 594882 595085 + protein_AaeX C9E52_03115 QCM75322 595093 596022 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E52_03120 QCM75323 596028 597995 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E52_03125 QCM75324 598087 598359 + hypothetical_protein C9E52_03130 QCM75325 598415 598678 - DUF1471_domain-containing_protein C9E52_03135 QCM75326 599043 599513 - arginine_repressor C9E52_03140 QCM75327 599948 600886 + malate_dehydrogenase C9E52_03145 QCM75328 600950 602017 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E52_03150 QCM75329 602107 603474 - serine_endoprotease_DegQ C9E52_03155 QCM75330 603628 604026 - hypothetical_protein C9E52_03160 QCM75331 604220 605347 + cell_division_protein_ZapE C9E52_03165 QCM75332 605566 605994 + 50S_ribosomal_protein_L13 C9E52_03170 QCM75333 606010 606402 + 30S_ribosomal_protein_S9 C9E52_03175 QCM75334 606320 606541 - hypothetical_protein C9E52_03180 QCM79898 606515 606694 + hypothetical_protein C9E52_03185 QCM79897 606646 606855 - hypothetical_protein C9E52_03190 QCM75335 606797 607435 + stringent_starvation_protein_A C9E52_03195 QCM75336 607441 607938 + stringent_starvation_protein_B C9E52_03200 QCM75337 607973 609337 - C4-dicarboxylate_ABC_transporter C9E52_03205 C9E52_03210 609337 609447 + transposase no_locus_tag QCM75338 609717 610508 + transcriptional_regulator_NanR nanR QCM75339 610630 611523 + N-acetylneuraminate_lyase nanA QCM75340 611632 613122 + MFS_transporter C9E52_03225 QCM75341 613170 613859 + N-acetylmannosamine-6-phosphate_2-epimerase C9E52_03230 QCM75342 613856 614731 + N-acetylmannosamine_kinase C9E52_03235 QCM75343 614728 615192 + YhcH/YjgK/YiaL_family_protein C9E52_03240 QCM75344 615252 616301 - DUF1016_domain-containing_protein C9E52_03245 QCM75345 616485 617903 - glutamate_synthase_small_subunit C9E52_03250 QCM75346 617916 622376 - glutamate_synthase_large_subunit C9E52_03255 C9E52_03260 622299 622525 + hypothetical_protein no_locus_tag QCM75347 622423 622659 + hypothetical_protein C9E52_03265 QCM79899 623050 623979 + TIGR01212_family_radical_SAM_protein C9E52_03270 QCM75348 624075 626411 + hybrid_sensor_histidine_kinase/response regulator C9E52_03275 QCM75349 626641 627294 + isoprenoid_biosynthesis_protein_ElbB C9E52_03280 QCM75350 627291 628019 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E52_03285 QCM75351 628016 628648 - protein_YrbL yrbL QCM75352 628862 629134 - phosphocarrier_protein_NPr C9E52_03295 QCM75353 629131 629985 - RNase_adaptor_protein_RapZ C9E52_03300 QCM75354 630031 630522 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E52_03305 QCM75355 630640 630927 - ribosome_hibernation_promoting_factor C9E52_03310 QCM75356 630950 632383 - RNA_polymerase_sigma-54_factor C9E52_03315 QCM75357 632431 633156 - ABC_transporter_ATP-binding_protein C9E52_03320 QCM75358 633163 633720 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E52_03325 QCM75359 633689 634264 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCM75360 634261 634827 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM75361 634848 635834 - arabinose_5-phosphate_isomerase_KdsD C9E52_03340 QCM75362 635848 636825 - calcium/sodium_antiporter C9E52_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM75344 100 723 100.0 0.0 PJR32595.1 QCM75343 100 318 100.0 6e-109 PJR32596.1 QCM75342 100 570 100.0 0.0 PJR32597.1 QCM75341 100 461 100.0 2e-162 PJR32598.1 QCM75340 100 993 100.0 0.0 PJR32599.1 QCM75339 100 611 100.0 0.0 PJR32600.1 QCM75338 100 537 100.0 0.0 >> 14. CP028650_0 Source: Escherichia coli strain 124 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: QCM69845 592191 593636 + metalloprotease_TldD C9E53_03105 QCM69846 593770 594699 - HTH-type_transcriptional_activator_AaeR C9E53_03110 QCM69847 594882 595085 + protein_AaeX C9E53_03115 QCM69848 595093 596022 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E53_03120 QCM69849 596028 597995 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E53_03125 QCM69850 598087 598359 + hypothetical_protein C9E53_03130 QCM69851 598415 598678 - DUF1471_domain-containing_protein C9E53_03135 QCM69852 599043 599513 - arginine_repressor C9E53_03140 QCM69853 599948 600886 + malate_dehydrogenase C9E53_03145 QCM69854 600950 602017 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E53_03150 QCM69855 602107 603474 - serine_endoprotease_DegQ C9E53_03155 QCM69856 603628 604026 - hypothetical_protein C9E53_03160 QCM69857 604220 605347 + cell_division_protein_ZapE C9E53_03165 QCM69858 605566 605994 + 50S_ribosomal_protein_L13 C9E53_03170 QCM69859 606010 606402 + 30S_ribosomal_protein_S9 C9E53_03175 QCM69860 606320 606541 - hypothetical_protein C9E53_03180 QCM74421 606515 606694 + hypothetical_protein C9E53_03185 QCM74420 606646 606855 - hypothetical_protein C9E53_03190 QCM69861 606797 607435 + stringent_starvation_protein_A C9E53_03195 QCM69862 607441 607938 + stringent_starvation_protein_B C9E53_03200 QCM69863 607973 609337 - C4-dicarboxylate_ABC_transporter C9E53_03205 C9E53_03210 609337 609447 + transposase no_locus_tag QCM69864 609717 610508 + transcriptional_regulator_NanR nanR QCM69865 610630 611523 + N-acetylneuraminate_lyase nanA QCM69866 611632 613122 + MFS_transporter C9E53_03225 QCM69867 613170 613859 + N-acetylmannosamine-6-phosphate_2-epimerase C9E53_03230 QCM69868 613856 614731 + N-acetylmannosamine_kinase C9E53_03235 QCM69869 614728 615192 + YhcH/YjgK/YiaL_family_protein C9E53_03240 QCM69870 615252 616301 - DUF1016_domain-containing_protein C9E53_03245 QCM69871 616485 617903 - glutamate_synthase_small_subunit C9E53_03250 QCM69872 617916 622376 - glutamate_synthase_large_subunit C9E53_03255 C9E53_03260 622299 622525 + hypothetical_protein no_locus_tag QCM69873 622423 622659 + hypothetical_protein C9E53_03265 QCM74422 623050 623979 + TIGR01212_family_radical_SAM_protein C9E53_03270 QCM69874 624075 626411 + hybrid_sensor_histidine_kinase/response regulator C9E53_03275 QCM69875 626641 627294 + isoprenoid_biosynthesis_protein_ElbB C9E53_03280 QCM69876 627291 628019 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E53_03285 QCM69877 628016 628648 - protein_YrbL yrbL QCM69878 628862 629134 - phosphocarrier_protein_NPr C9E53_03295 QCM69879 629131 629985 - RNase_adaptor_protein_RapZ C9E53_03300 QCM69880 630031 630522 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E53_03305 QCM69881 630640 630927 - ribosome_hibernation_promoting_factor C9E53_03310 QCM69882 630950 632383 - RNA_polymerase_sigma-54_factor C9E53_03315 QCM69883 632431 633156 - ABC_transporter_ATP-binding_protein C9E53_03320 QCM69884 633163 633720 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E53_03325 QCM69885 633689 634264 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCM69886 634261 634827 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM69887 634848 635834 - arabinose_5-phosphate_isomerase_KdsD C9E53_03340 QCM69888 635848 636825 - calcium/sodium_antiporter C9E53_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM69870 100 723 100.0 0.0 PJR32595.1 QCM69869 100 318 100.0 6e-109 PJR32596.1 QCM69868 100 570 100.0 0.0 PJR32597.1 QCM69867 100 461 100.0 2e-162 PJR32598.1 QCM69866 100 993 100.0 0.0 PJR32599.1 QCM69865 100 611 100.0 0.0 PJR32600.1 QCM69864 100 537 100.0 0.0 >> 15. CP018252_0 Source: Escherichia coli strain 9000, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: API33806 4122454 4123440 + D-arabinose_5-phosphate_isomerase BFL16_22795 API33807 4123461 4124027 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BFL16_22800 API33808 4124024 4124599 + LPS_export_ABC_transporter_periplasmic_protein LptC BFL16_22805 API33809 4124568 4125125 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA BFL16_22810 API33810 4125132 4125857 + LPS_export_ABC_transporter_ATP-binding_protein BFL16_22815 API33811 4125905 4127338 + RNA_polymerase_factor_sigma-54 BFL16_22820 API33812 4127361 4127648 + ribosomal_subunit_interface_protein BFL16_22825 API33813 4127766 4128257 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN BFL16_22830 API33814 4128303 4129157 + RNase_adaptor_protein_RapZ BFL16_22835 API33815 4129154 4129426 + phosphohistidinoprotein-hexose phosphotransferase BFL16_22840 API33816 4129640 4130272 + hypothetical_protein BFL16_22845 API33817 4130269 4130997 - monofunctional_biosynthetic_peptidoglycan transglycosylase BFL16_22850 API33818 4130994 4131647 - isoprenoid_biosynthesis_protein_ElbB BFL16_22855 API33819 4131877 4134213 - aerobic_respiration_two-component_sensor histidine kinase ArcB BFL16_22860 API35319 4134309 4135238 - TIGR01212_family_radical_SAM_protein BFL16_22865 API33820 4135629 4135865 - hypothetical_protein BFL16_22870 BFL16_22875 4135763 4135989 - hypothetical_protein no_locus_tag API33821 4135912 4140372 + glutamate_synthase_large_subunit BFL16_22880 API33822 4140385 4141803 + glutamate_synthase BFL16_22885 API33823 4141987 4143036 + hypothetical_protein BFL16_22890 API33824 4143096 4143560 - hypothetical_protein BFL16_22895 API33825 4143557 4144432 - N-acetylmannosamine_kinase BFL16_22900 API33826 4144429 4145118 - N-acetylmannosamine-6-phosphate_2-epimerase BFL16_22905 API33827 4145166 4146656 - MFS_transporter BFL16_22910 API33828 4146765 4147658 - N-acetylneuraminate_lyase BFL16_22915 API33829 4147780 4148571 - transcriptional_regulator_NanR BFL16_22920 BFL16_22925 4148841 4148951 - transposase no_locus_tag BFL16_22930 4148951 4150307 + C4-dicarboxylate_transporter no_locus_tag API33830 4150350 4150847 - ClpXP_protease_specificity-enhancing_factor BFL16_22935 API33831 4150853 4151491 - stringent_starvation_protein_A sspA API33832 4151886 4152278 - 30S_ribosomal_protein_S9 BFL16_22945 API33833 4152294 4152722 - 50S_ribosomal_protein_L13 BFL16_22950 API33834 4152941 4154068 - cell_division_protein_ZapE BFL16_22955 API33835 4154262 4154660 + hypothetical_protein BFL16_22960 API33836 4154814 4156181 + serine_endoprotease_DegQ BFL16_22965 API33837 4156271 4157338 + outer_membrane-stress_sensor_serine endopeptidase DegS BFL16_22970 API33838 4157402 4158340 - malate_dehydrogenase BFL16_22975 API33839 4158775 4159245 + arginine_repressor BFL16_22980 API33840 4159610 4159873 + hypothetical_protein BFL16_22985 API33841 4159929 4160201 - hypothetical_protein BFL16_22990 API33842 4160293 4162260 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BFL16_22995 API33843 4162266 4163195 - efflux_transporter_periplasmic_adaptor_subunit BFL16_23000 API33844 4163203 4163406 - transporter BFL16_23005 API33845 4163589 4164518 + transcriptional_regulator BFL16_23010 API33846 4164652 4166097 - metalloprotease_TldD BFL16_23015 API33847 4166253 4170053 - TIGR02099_family_protein BFL16_23020 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 API33823 100 723 100.0 0.0 PJR32595.1 API33824 100 318 100.0 6e-109 PJR32596.1 API33825 100 570 100.0 0.0 PJR32597.1 API33826 100 461 100.0 2e-162 PJR32598.1 API33827 100 993 100.0 0.0 PJR32599.1 API33828 100 611 100.0 0.0 PJR32600.1 API33829 100 537 100.0 0.0 >> 16. CP018250_0 Source: Escherichia coli strain 10671 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: API39375 4052124 4053110 + D-arabinose_5-phosphate_isomerase BFL17_22160 API39376 4053131 4053697 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BFL17_22165 API39377 4053694 4054269 + LPS_export_ABC_transporter_periplasmic_protein LptC BFL17_22170 API39378 4054238 4054795 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA BFL17_22175 API39379 4054802 4055527 + LPS_export_ABC_transporter_ATP-binding_protein BFL17_22180 API39380 4055575 4057008 + RNA_polymerase_factor_sigma-54 BFL17_22185 API39381 4057031 4057318 + ribosomal_subunit_interface_protein BFL17_22190 API39382 4057436 4057927 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN BFL17_22195 API39383 4057973 4058827 + RNase_adaptor_protein_RapZ BFL17_22200 API39384 4058824 4059096 + phosphohistidinoprotein-hexose phosphotransferase BFL17_22205 API39385 4059310 4059942 + hypothetical_protein BFL17_22210 API39386 4059939 4060667 - monofunctional_biosynthetic_peptidoglycan transglycosylase BFL17_22215 API39387 4060664 4061317 - isoprenoid_biosynthesis_protein_ElbB BFL17_22220 API39388 4061547 4063883 - aerobic_respiration_two-component_sensor histidine kinase ArcB BFL17_22225 API40871 4063979 4064908 - TIGR01212_family_radical_SAM_protein BFL17_22230 API39389 4065299 4065535 - hypothetical_protein BFL17_22235 BFL17_22240 4065433 4065659 - hypothetical_protein no_locus_tag API39390 4065582 4070042 + glutamate_synthase_large_subunit BFL17_22245 API39391 4070055 4071473 + glutamate_synthase BFL17_22250 API39392 4071657 4072706 + hypothetical_protein BFL17_22255 API39393 4072766 4073230 - hypothetical_protein BFL17_22260 API39394 4073227 4074102 - N-acetylmannosamine_kinase BFL17_22265 API39395 4074099 4074788 - N-acetylmannosamine-6-phosphate_2-epimerase BFL17_22270 API39396 4074836 4076326 - MFS_transporter BFL17_22275 API39397 4076435 4077328 - N-acetylneuraminate_lyase BFL17_22280 API39398 4077450 4078241 - transcriptional_regulator_NanR BFL17_22285 BFL17_22290 4078511 4078621 - transposase no_locus_tag BFL17_22295 4078621 4079977 + C4-dicarboxylate_transporter no_locus_tag API39399 4080020 4080517 - ClpXP_protease_specificity-enhancing_factor BFL17_22300 API39400 4080523 4081161 - stringent_starvation_protein_A sspA API39401 4081556 4081948 - 30S_ribosomal_protein_S9 BFL17_22310 API39402 4081964 4082392 - 50S_ribosomal_protein_L13 BFL17_22315 API39403 4082611 4083738 - cell_division_protein_ZapE BFL17_22320 API39404 4083932 4084330 + hypothetical_protein BFL17_22325 API39405 4084484 4085851 + serine_endoprotease_DegQ BFL17_22330 API39406 4085941 4087008 + outer_membrane-stress_sensor_serine endopeptidase DegS BFL17_22335 API39407 4087072 4088010 - malate_dehydrogenase BFL17_22340 API39408 4088445 4088915 + arginine_repressor BFL17_22345 API39409 4089280 4089543 + hypothetical_protein BFL17_22350 API39410 4089599 4089871 - hypothetical_protein BFL17_22355 API39411 4089963 4091930 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BFL17_22360 API39412 4091936 4092865 - efflux_transporter_periplasmic_adaptor_subunit BFL17_22365 API39413 4092873 4093076 - transporter BFL17_22370 API39414 4093259 4094188 + transcriptional_regulator BFL17_22375 API39415 4094322 4095767 - metalloprotease_TldD BFL17_22380 API39416 4095923 4099723 - TIGR02099_family_protein BFL17_22385 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 API39392 100 723 100.0 0.0 PJR32595.1 API39393 100 318 100.0 6e-109 PJR32596.1 API39394 100 570 100.0 0.0 PJR32597.1 API39395 100 461 100.0 2e-162 PJR32598.1 API39396 100 993 100.0 0.0 PJR32599.1 API39397 100 611 100.0 0.0 PJR32600.1 API39398 100 537 100.0 0.0 >> 17. CP018247_0 Source: Escherichia coli strain 7784 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: API28140 3982708 3983694 + D-arabinose_5-phosphate_isomerase BFL18_21765 API28141 3983715 3984281 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BFL18_21770 API28142 3984278 3984853 + LPS_export_ABC_transporter_periplasmic_protein LptC BFL18_21775 API28143 3984822 3985379 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA BFL18_21780 API28144 3985386 3986111 + LPS_export_ABC_transporter_ATP-binding_protein BFL18_21785 API28145 3986159 3987592 + RNA_polymerase_factor_sigma-54 BFL18_21790 API28146 3987615 3987902 + ribosomal_subunit_interface_protein BFL18_21795 API28147 3988020 3988511 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN BFL18_21800 API28148 3988557 3989411 + RNase_adaptor_protein_RapZ BFL18_21805 API28149 3989408 3989680 + phosphohistidinoprotein-hexose phosphotransferase BFL18_21810 API28150 3989894 3990526 + hypothetical_protein BFL18_21815 API28151 3990523 3991251 - monofunctional_biosynthetic_peptidoglycan transglycosylase BFL18_21820 API28152 3991248 3991901 - isoprenoid_biosynthesis_protein_ElbB BFL18_21825 API28153 3992131 3994467 - aerobic_respiration_two-component_sensor histidine kinase ArcB BFL18_21830 API29636 3994563 3995492 - TIGR01212_family_radical_SAM_protein BFL18_21835 API28154 3995883 3996119 - hypothetical_protein BFL18_21840 BFL18_21845 3996017 3996243 - hypothetical_protein no_locus_tag API28155 3996166 4000626 + glutamate_synthase_large_subunit BFL18_21850 API28156 4000639 4002057 + glutamate_synthase BFL18_21855 API28157 4002241 4003290 + hypothetical_protein BFL18_21860 API28158 4003350 4003814 - hypothetical_protein BFL18_21865 API28159 4003811 4004686 - N-acetylmannosamine_kinase BFL18_21870 API28160 4004683 4005372 - N-acetylmannosamine-6-phosphate_2-epimerase BFL18_21875 API28161 4005420 4006910 - MFS_transporter BFL18_21880 API28162 4007019 4007912 - N-acetylneuraminate_lyase BFL18_21885 API28163 4008034 4008825 - transcriptional_regulator_NanR BFL18_21890 BFL18_21895 4009095 4009205 - transposase no_locus_tag BFL18_21900 4009205 4010561 + C4-dicarboxylate_transporter no_locus_tag API28164 4010604 4011101 - ClpXP_protease_specificity-enhancing_factor BFL18_21905 API28165 4011107 4011745 - stringent_starvation_protein_A sspA API28166 4012140 4012532 - 30S_ribosomal_protein_S9 BFL18_21915 API28167 4012548 4012976 - 50S_ribosomal_protein_L13 BFL18_21920 API28168 4013195 4014322 - cell_division_protein_ZapE BFL18_21925 API28169 4014516 4014914 + hypothetical_protein BFL18_21930 API28170 4015068 4016435 + serine_endoprotease_DegQ BFL18_21935 API28171 4016525 4017592 + outer_membrane-stress_sensor_serine endopeptidase DegS BFL18_21940 API28172 4017656 4018594 - malate_dehydrogenase BFL18_21945 API28173 4019029 4019499 + arginine_repressor BFL18_21950 API28174 4019864 4020127 + hypothetical_protein BFL18_21955 API28175 4020183 4020455 - hypothetical_protein BFL18_21960 API28176 4020547 4022514 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BFL18_21965 API28177 4022520 4023449 - efflux_transporter_periplasmic_adaptor_subunit BFL18_21970 API28178 4023457 4023660 - transporter BFL18_21975 API28179 4023843 4024772 + transcriptional_regulator BFL18_21980 API28180 4024906 4026351 - metalloprotease_TldD BFL18_21985 API28181 4026507 4030307 - TIGR02099_family_protein BFL18_21990 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 API28157 100 723 100.0 0.0 PJR32595.1 API28158 100 318 100.0 6e-109 PJR32596.1 API28159 100 570 100.0 0.0 PJR32597.1 API28160 100 461 100.0 2e-162 PJR32598.1 API28161 100 993 100.0 0.0 PJR32599.1 API28162 100 611 100.0 0.0 PJR32600.1 API28163 100 537 100.0 0.0 >> 18. CP018239_0 Source: Escherichia coli strain 272 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: API05849 4071456 4072442 + D-arabinose_5-phosphate_isomerase BFL22_22295 API05850 4072463 4073029 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BFL22_22300 API05851 4073026 4073601 + LPS_export_ABC_transporter_periplasmic_protein LptC BFL22_22305 API05852 4073570 4074127 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA BFL22_22310 API05853 4074134 4074859 + LPS_export_ABC_transporter_ATP-binding_protein BFL22_22315 API05854 4074907 4076340 + RNA_polymerase_factor_sigma-54 BFL22_22320 API05855 4076363 4076650 + ribosomal_subunit_interface_protein BFL22_22325 API05856 4076768 4077259 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN BFL22_22330 API05857 4077305 4078159 + RNase_adaptor_protein_RapZ BFL22_22335 API05858 4078156 4078428 + phosphohistidinoprotein-hexose phosphotransferase BFL22_22340 API05859 4078642 4079274 + hypothetical_protein BFL22_22345 API05860 4079271 4079999 - monofunctional_biosynthetic_peptidoglycan transglycosylase BFL22_22350 API05861 4079996 4080649 - isoprenoid_biosynthesis_protein_ElbB BFL22_22355 API05862 4080879 4083215 - aerobic_respiration_two-component_sensor histidine kinase ArcB BFL22_22360 API07364 4083311 4084240 - TIGR01212_family_radical_SAM_protein BFL22_22365 API05863 4084631 4084867 - hypothetical_protein BFL22_22370 BFL22_22375 4084765 4084991 - hypothetical_protein no_locus_tag API05864 4084914 4089374 + glutamate_synthase_large_subunit BFL22_22380 API05865 4089387 4090805 + glutamate_synthase BFL22_22385 API05866 4090989 4092038 + hypothetical_protein BFL22_22390 API05867 4092098 4092562 - hypothetical_protein BFL22_22395 API05868 4092559 4093434 - N-acetylmannosamine_kinase BFL22_22400 API05869 4093431 4094120 - N-acetylmannosamine-6-phosphate_2-epimerase BFL22_22405 API05870 4094168 4095658 - MFS_transporter BFL22_22410 API05871 4095767 4096660 - N-acetylneuraminate_lyase BFL22_22415 API05872 4096782 4097573 - transcriptional_regulator_NanR BFL22_22420 BFL22_22425 4097843 4097953 - transposase no_locus_tag BFL22_22430 4097953 4099309 + C4-dicarboxylate_transporter no_locus_tag API05873 4099352 4099849 - ClpXP_protease_specificity-enhancing_factor BFL22_22435 API05874 4099855 4100493 - stringent_starvation_protein_A sspA API05875 4100888 4101280 - 30S_ribosomal_protein_S9 BFL22_22445 API05876 4101296 4101724 - 50S_ribosomal_protein_L13 BFL22_22450 API05877 4101943 4103070 - cell_division_protein_ZapE BFL22_22455 API05878 4103264 4103662 + hypothetical_protein BFL22_22460 API05879 4103816 4105183 + serine_endoprotease_DegQ BFL22_22465 API05880 4105273 4106340 + outer_membrane-stress_sensor_serine endopeptidase DegS BFL22_22470 API05881 4106404 4107342 - malate_dehydrogenase BFL22_22475 API05882 4107777 4108247 + arginine_repressor BFL22_22480 API05883 4108612 4108875 + hypothetical_protein BFL22_22485 API05884 4108931 4109203 - hypothetical_protein BFL22_22490 API05885 4109295 4111262 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BFL22_22495 API05886 4111268 4112197 - efflux_transporter_periplasmic_adaptor_subunit BFL22_22500 API05887 4112205 4112408 - transporter BFL22_22505 API05888 4112591 4113520 + transcriptional_regulator BFL22_22510 API05889 4113654 4115099 - metalloprotease_TldD BFL22_22515 API05890 4115255 4119055 - TIGR02099_family_protein BFL22_22520 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 API05866 100 723 100.0 0.0 PJR32595.1 API05867 100 318 100.0 6e-109 PJR32596.1 API05868 100 570 100.0 0.0 PJR32597.1 API05869 100 461 100.0 2e-162 PJR32598.1 API05870 100 993 100.0 0.0 PJR32599.1 API05871 100 611 100.0 0.0 PJR32600.1 API05872 100 537 100.0 0.0 >> 19. CP018237_0 Source: Escherichia coli strain 155, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: API00248 4115191 4116177 + D-arabinose_5-phosphate_isomerase BFL20_22625 API00249 4116198 4116764 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BFL20_22630 API00250 4116761 4117336 + LPS_export_ABC_transporter_periplasmic_protein LptC BFL20_22635 API00251 4117305 4117862 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA BFL20_22640 API00252 4117869 4118594 + LPS_export_ABC_transporter_ATP-binding_protein BFL20_22645 API00253 4118642 4120075 + RNA_polymerase_factor_sigma-54 BFL20_22650 API00254 4120098 4120385 + ribosomal_subunit_interface_protein BFL20_22655 API00255 4120503 4120994 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN BFL20_22660 API00256 4121040 4121894 + RNase_adaptor_protein_RapZ BFL20_22665 API00257 4121891 4122163 + phosphohistidinoprotein-hexose phosphotransferase BFL20_22670 API00258 4122377 4123009 + hypothetical_protein BFL20_22675 API00259 4123006 4123734 - monofunctional_biosynthetic_peptidoglycan transglycosylase BFL20_22680 API00260 4123731 4124384 - isoprenoid_biosynthesis_protein_ElbB BFL20_22685 API00261 4124614 4126950 - aerobic_respiration_two-component_sensor histidine kinase ArcB BFL20_22690 API01761 4127046 4127975 - TIGR01212_family_radical_SAM_protein BFL20_22695 API00262 4128366 4128602 - hypothetical_protein BFL20_22700 BFL20_22705 4128500 4128726 - hypothetical_protein no_locus_tag API00263 4128649 4133109 + glutamate_synthase_large_subunit BFL20_22710 API00264 4133122 4134540 + glutamate_synthase BFL20_22715 API00265 4134724 4135773 + hypothetical_protein BFL20_22720 API00266 4135833 4136297 - hypothetical_protein BFL20_22725 API00267 4136294 4137169 - N-acetylmannosamine_kinase BFL20_22730 API00268 4137166 4137855 - N-acetylmannosamine-6-phosphate_2-epimerase BFL20_22735 API00269 4137903 4139393 - MFS_transporter BFL20_22740 API00270 4139502 4140395 - N-acetylneuraminate_lyase BFL20_22745 API00271 4140517 4141308 - transcriptional_regulator_NanR BFL20_22750 BFL20_22755 4141689 4143045 + C4-dicarboxylate_transporter no_locus_tag API00272 4143088 4143585 - ClpXP_protease_specificity-enhancing_factor BFL20_22760 API00273 4143591 4144229 - stringent_starvation_protein_A sspA API00274 4144624 4145016 - 30S_ribosomal_protein_S9 BFL20_22770 API00275 4145032 4145460 - 50S_ribosomal_protein_L13 BFL20_22775 API00276 4145679 4146806 - cell_division_protein_ZapE BFL20_22780 API00277 4147000 4147398 + hypothetical_protein BFL20_22785 API00278 4147552 4148919 + serine_endoprotease_DegQ BFL20_22790 API00279 4149009 4150076 + outer_membrane-stress_sensor_serine endopeptidase DegS BFL20_22795 API00280 4150140 4151078 - malate_dehydrogenase BFL20_22800 API00281 4151513 4151983 + arginine_repressor BFL20_22805 API00282 4152348 4152611 + hypothetical_protein BFL20_22810 API00283 4152667 4152939 - hypothetical_protein BFL20_22815 API00284 4153031 4154998 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BFL20_22820 API00285 4155004 4155933 - efflux_transporter_periplasmic_adaptor_subunit BFL20_22825 API00286 4155941 4156144 - transporter BFL20_22830 API00287 4156327 4157256 + transcriptional_regulator BFL20_22835 API00288 4157390 4158835 - metalloprotease_TldD BFL20_22840 API00289 4158991 4162791 - TIGR02099_family_protein BFL20_22845 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 API00265 100 723 100.0 0.0 PJR32595.1 API00266 100 318 100.0 6e-109 PJR32596.1 API00267 100 570 100.0 0.0 PJR32597.1 API00268 100 461 100.0 2e-162 PJR32598.1 API00269 100 993 100.0 0.0 PJR32599.1 API00270 100 611 100.0 0.0 PJR32600.1 API00271 100 537 100.0 0.0 >> 20. CP017444_0 Source: Escherichia coli O157:H7 strain 8368 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: AOV46687 593134 594579 + metalloprotease_TldD A4C39_03035 AOV46688 594713 595642 - transcriptional_regulator A4C39_03040 AOV51205 595825 596028 + transporter A4C39_03045 AOV46689 596036 596965 + efflux_transporter_periplasmic_adaptor_subunit A4C39_03050 AOV46690 596971 598938 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB A4C39_03055 AOV46691 599030 599302 + hypothetical_protein A4C39_03060 AOV46692 599358 599621 - hypothetical_protein A4C39_03065 AOV46693 599986 600456 - arginine_repressor A4C39_03070 AOV46694 600891 601829 + malate_dehydrogenase A4C39_03075 AOV46695 601893 602960 - outer_membrane-stress_sensor_serine endopeptidase DegS A4C39_03080 AOV46696 603050 604417 - serine_endoprotease_DegQ A4C39_03085 AOV46697 604571 604969 - hypothetical_protein A4C39_03090 AOV46698 605163 606290 + cell_division_protein_ZapE A4C39_03095 AOV46699 606509 606937 + 50S_ribosomal_protein_L13 A4C39_03100 AOV46700 606953 607345 + 30S_ribosomal_protein_S9 A4C39_03105 AOV46701 607740 608378 + stringent_starvation_protein_A sspA AOV46702 608384 608881 + ClpXP_protease_specificity-enhancing_factor A4C39_03115 AOV46703 608916 610280 - C4-dicarboxylate_ABC_transporter A4C39_03120 AOV46704 610660 611451 + transcriptional_regulator_NanR A4C39_03125 AOV46705 611573 612466 + N-acetylneuraminate_lyase A4C39_03130 AOV46706 612575 614065 + sialic_acid_transporter A4C39_03135 AOV46707 614113 614802 + N-acetylmannosamine-6-phosphate_2-epimerase A4C39_03140 AOV46708 614799 615674 + N-acetylmannosamine_kinase A4C39_03145 AOV46709 615671 616135 + hypothetical_protein A4C39_03150 AOV46710 616195 617244 - hypothetical_protein A4C39_03155 AOV46711 617428 618846 - glutamate_synthase A4C39_03160 AOV51206 618859 623319 - glutamate_synthase_large_subunit A4C39_03165 AOV51207 623993 624922 + TIGR01212_family_radical_SAM_protein A4C39_03170 AOV46712 625018 627354 + aerobic_respiration_two-component_sensor histidine kinase ArcB A4C39_03175 AOV46713 627584 628237 + isoprenoid_biosynthesis_protein_ElbB A4C39_03180 AOV46714 628234 628962 + monofunctional_biosynthetic_peptidoglycan transglycosylase A4C39_03185 AOV46715 628959 629591 - hypothetical_protein A4C39_03190 AOV46716 629805 630077 - phosphohistidinoprotein-hexose phosphotransferase A4C39_03195 AOV46717 630074 630928 - RNase_adaptor_protein_RapZ A4C39_03200 AOV46718 630974 631465 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN A4C39_03205 AOV46719 631583 631870 - ribosomal_subunit_interface_protein A4C39_03210 AOV46720 631893 633326 - RNA_polymerase_factor_sigma-54 A4C39_03215 AOV46721 633374 634099 - LPS_export_ABC_transporter_ATP-binding_protein A4C39_03220 AOV46722 634106 634663 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA A4C39_03225 AOV46723 634632 635207 - LPS_export_ABC_transporter_periplasmic_protein LptC A4C39_03230 AOV46724 635204 635770 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase A4C39_03235 AOV46725 635791 636777 - D-arabinose_5-phosphate_isomerase A4C39_03240 AOV46726 636791 637768 - calcium/sodium_antiporter A4C39_03245 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AOV46710 100 723 100.0 0.0 PJR32595.1 AOV46709 100 318 100.0 6e-109 PJR32596.1 AOV46708 100 570 100.0 0.0 PJR32597.1 AOV46707 100 461 100.0 2e-162 PJR32598.1 AOV46706 100 993 100.0 0.0 PJR32599.1 AOV46705 100 611 100.0 0.0 PJR32600.1 AOV46704 100 537 100.0 0.0 >> 21. CP017440_0 Source: Escherichia coli O157:H7 strain 3384 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: AOV35930 593504 594949 + metalloprotease_TldD A4C38_03030 AOV35931 595083 596012 - transcriptional_regulator A4C38_03035 AOV40449 596195 596398 + transporter A4C38_03040 AOV35932 596406 597335 + efflux_transporter_periplasmic_adaptor_subunit A4C38_03045 AOV35933 597341 599308 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB A4C38_03050 AOV35934 599400 599672 + hypothetical_protein A4C38_03055 AOV35935 599728 599991 - hypothetical_protein A4C38_03060 AOV35936 600356 600826 - arginine_repressor A4C38_03065 AOV35937 601261 602199 + malate_dehydrogenase A4C38_03070 AOV35938 602263 603330 - outer_membrane-stress_sensor_serine endopeptidase DegS A4C38_03075 AOV35939 603420 604787 - serine_endoprotease_DegQ A4C38_03080 AOV35940 604941 605339 - hypothetical_protein A4C38_03085 AOV35941 605533 606660 + cell_division_protein_ZapE A4C38_03090 AOV35942 606879 607307 + 50S_ribosomal_protein_L13 A4C38_03095 AOV35943 607323 607715 + 30S_ribosomal_protein_S9 A4C38_03100 AOV35944 608110 608748 + stringent_starvation_protein_A sspA AOV35945 608754 609251 + ClpXP_protease_specificity-enhancing_factor A4C38_03110 AOV35946 609286 610650 - C4-dicarboxylate_ABC_transporter A4C38_03115 AOV35947 611030 611821 + transcriptional_regulator_NanR A4C38_03120 AOV35948 611943 612836 + N-acetylneuraminate_lyase A4C38_03125 AOV35949 612945 614435 + sialic_acid_transporter A4C38_03130 AOV35950 614483 615172 + N-acetylmannosamine-6-phosphate_2-epimerase A4C38_03135 AOV35951 615169 616044 + N-acetylmannosamine_kinase A4C38_03140 AOV35952 616041 616505 + hypothetical_protein A4C38_03145 AOV35953 616565 617614 - hypothetical_protein A4C38_03150 AOV35954 617798 619216 - glutamate_synthase A4C38_03155 AOV40450 619229 623689 - glutamate_synthase_large_subunit A4C38_03160 AOV40451 624363 625292 + TIGR01212_family_radical_SAM_protein A4C38_03165 AOV35955 625388 627724 + aerobic_respiration_two-component_sensor histidine kinase ArcB A4C38_03170 AOV35956 627954 628607 + isoprenoid_biosynthesis_protein_ElbB A4C38_03175 AOV35957 628604 629332 + monofunctional_biosynthetic_peptidoglycan transglycosylase A4C38_03180 AOV35958 629329 629961 - hypothetical_protein A4C38_03185 AOV35959 630175 630447 - phosphohistidinoprotein-hexose phosphotransferase A4C38_03190 AOV35960 630444 631298 - RNase_adaptor_protein_RapZ A4C38_03195 AOV35961 631344 631835 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN A4C38_03200 AOV35962 631953 632240 - ribosomal_subunit_interface_protein A4C38_03205 AOV35963 632263 633696 - RNA_polymerase_factor_sigma-54 A4C38_03210 AOV35964 633744 634469 - LPS_export_ABC_transporter_ATP-binding_protein A4C38_03215 AOV35965 634476 635033 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA A4C38_03220 AOV35966 635002 635577 - LPS_export_ABC_transporter_periplasmic_protein LptC A4C38_03225 AOV35967 635574 636140 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase A4C38_03230 AOV35968 636161 637147 - D-arabinose_5-phosphate_isomerase A4C38_03235 AOV35969 637161 638138 - calcium/sodium_antiporter A4C38_03240 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AOV35953 100 723 100.0 0.0 PJR32595.1 AOV35952 100 318 100.0 6e-109 PJR32596.1 AOV35951 100 570 100.0 0.0 PJR32597.1 AOV35950 100 461 100.0 2e-162 PJR32598.1 AOV35949 100 993 100.0 0.0 PJR32599.1 AOV35948 100 611 100.0 0.0 PJR32600.1 AOV35947 100 537 100.0 0.0 >> 22. CP015023_0 Source: Escherichia coli strain SRCC 1675 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: AMW48403 2174889 2175875 + D-arabinose_5-phosphate_isomerase AR439_11325 AMW48404 2175896 2176462 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase AR439_11330 AMW48405 2176459 2177034 + LPS_export_ABC_transporter_periplasmic_protein LptC AR439_11335 AMW48406 2177003 2177560 + lipopolysaccharide_transport_periplasmic_protein LptA AR439_11340 AMW48407 2177567 2178292 + ABC_transporter_ATP-binding_protein AR439_11345 AMW48408 2178340 2179773 + RNA_polymerase_factor_sigma-54 AR439_11350 AMW48409 2179796 2180083 + hypothetical_protein AR439_11355 AMW48410 2180201 2180692 + transcriptional_regulator AR439_11360 AMW48411 2180738 2181592 + RNase_adaptor_protein_RapZ AR439_11365 AMW48412 2181589 2181861 + phosphohistidinoprotein-hexose phosphotransferase AR439_11370 AMW48413 2182075 2182707 + hypothetical_protein AR439_11375 AMW48414 2182704 2183432 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AMW48415 2183429 2184082 - isoprenoid_biosynthesis_protein_ElbB AR439_11385 AMW48416 2184312 2186648 - aerobic_respiration_two-component_sensor histidine kinase ArcB AR439_11390 AMW51591 2186744 2187673 - radical_SAM_protein AR439_11395 AMW51592 2188347 2192807 + glutamate_synthase_large_subunit gltB AMW48417 2192820 2194238 + glutamate_synthase AR439_11405 AMW48418 2194422 2195471 + hypothetical_protein AR439_11410 AMW48419 2195531 2195995 - hypothetical_protein AR439_11415 AMW48420 2195992 2196867 - N-acetylmannosamine_kinase AR439_11420 AMW48421 2196864 2197553 - N-acetylmannosamine-6-phosphate_2-epimerase AR439_11425 AMW48422 2197601 2199091 - sialic_acid_transporter AR439_11430 AMW48423 2199200 2200093 - N-acetylneuraminate_lyase AR439_11435 AMW48424 2200215 2201006 - transcriptional_regulator_NanR AR439_11440 AMW48425 2201386 2202750 + C4-dicarboxylate_ABC_transporter AR439_11445 AMW48426 2202785 2203282 - stringent_starvation_protein_B AR439_11450 AMW48427 2203288 2203926 - stringent_starvation_protein_A sspA AMW48428 2204321 2204713 - 30S_ribosomal_protein_S9 AR439_11460 AMW48429 2204729 2205157 - 50S_ribosomal_protein_L13 AR439_11465 AMW48430 2205376 2206503 - hypothetical_protein AR439_11470 AMW48431 2206697 2207095 + hypothetical_protein AR439_11475 AMW48432 2207249 2208616 + serine_endoprotease_DegQ AR439_11480 AMW48433 2208706 2209773 + outer_membrane-stress_sensor_serine endopeptidase DegS AR439_11485 AMW48434 2209837 2210775 - malate_dehydrogenase AR439_11490 AMW48435 2211210 2211680 + arginine_repressor AR439_11495 AMW48436 2212045 2212308 + hypothetical_protein AR439_11500 AMW48437 2212364 2212636 - hypothetical_protein AR439_11505 AMW48438 2212728 2214695 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB AR439_11510 AMW48439 2214701 2215630 - efflux_transporter_periplasmic_adaptor_subunit AR439_11515 AMW51593 2215638 2215841 - transporter AR439_11520 AMW48440 2216024 2216953 + transcriptional_regulator AR439_11525 AMW48441 2217087 2218532 - metalloprotease_TldD tldD AMW48442 2218688 2222488 - hypothetical_protein AR439_11535 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AMW48418 100 723 100.0 0.0 PJR32595.1 AMW48419 100 318 100.0 6e-109 PJR32596.1 AMW48420 100 570 100.0 0.0 PJR32597.1 AMW48421 100 461 100.0 2e-162 PJR32598.1 AMW48422 100 993 100.0 0.0 PJR32599.1 AMW48423 100 611 100.0 0.0 PJR32600.1 AMW48424 100 537 100.0 0.0 >> 23. CP015020_0 Source: Escherichia coli strain 28RC1 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: AMW42983 2370840 2371826 + D-arabinose_5-phosphate_isomerase ARC77_12435 AMW42984 2371847 2372413 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase ARC77_12440 AMW42985 2372410 2372985 + LPS_export_ABC_transporter_periplasmic_protein LptC ARC77_12445 AMW42986 2372954 2373511 + lipopolysaccharide_transport_periplasmic_protein LptA ARC77_12450 AMW42987 2373518 2374243 + ABC_transporter_ATP-binding_protein ARC77_12455 AMW42988 2374291 2375724 + RNA_polymerase_factor_sigma-54 ARC77_12460 AMW42989 2375747 2376034 + hypothetical_protein ARC77_12465 AMW42990 2376152 2376643 + transcriptional_regulator ARC77_12470 AMW42991 2376689 2377543 + RNase_adaptor_protein_RapZ ARC77_12475 AMW42992 2377540 2377812 + phosphohistidinoprotein-hexose phosphotransferase ARC77_12480 AMW42993 2378026 2378658 + hypothetical_protein ARC77_12485 AMW42994 2378655 2379383 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AMW42995 2379380 2380033 - isoprenoid_biosynthesis_protein_ElbB ARC77_12495 AMW42996 2380263 2382599 - aerobic_respiration_two-component_sensor histidine kinase ArcB ARC77_12500 AMW46004 2382695 2383624 - radical_SAM_protein ARC77_12505 AMW46005 2384298 2388758 + glutamate_synthase_large_subunit gltB AMW42997 2388771 2390189 + glutamate_synthase ARC77_12515 AMW42998 2390373 2391422 + hypothetical_protein ARC77_12520 AMW42999 2391482 2391946 - hypothetical_protein ARC77_12525 AMW43000 2391943 2392818 - N-acetylmannosamine_kinase ARC77_12530 AMW43001 2392815 2393504 - N-acetylmannosamine-6-phosphate_2-epimerase ARC77_12535 AMW43002 2393552 2395042 - sialic_acid_transporter ARC77_12540 AMW43003 2395151 2396044 - N-acetylneuraminate_lyase ARC77_12545 AMW43004 2396166 2396957 - transcriptional_regulator_NanR ARC77_12550 AMW43005 2397337 2398701 + C4-dicarboxylate_ABC_transporter ARC77_12555 AMW43006 2398736 2399233 - stringent_starvation_protein_B ARC77_12560 AMW43007 2399239 2399877 - stringent_starvation_protein_A sspA AMW43008 2400272 2400664 - 30S_ribosomal_protein_S9 ARC77_12570 AMW43009 2400680 2401108 - 50S_ribosomal_protein_L13 ARC77_12575 AMW43010 2401327 2402454 - hypothetical_protein ARC77_12580 AMW43011 2402648 2403046 + hypothetical_protein ARC77_12585 AMW43012 2403200 2404567 + serine_endoprotease_DegQ ARC77_12590 AMW43013 2404657 2405724 + outer_membrane-stress_sensor_serine endopeptidase DegS ARC77_12595 AMW43014 2405788 2406726 - malate_dehydrogenase ARC77_12600 AMW43015 2407161 2407631 + arginine_repressor ARC77_12605 AMW43016 2407996 2408259 + hypothetical_protein ARC77_12610 AMW43017 2408315 2408587 - hypothetical_protein ARC77_12615 AMW43018 2408679 2410646 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB ARC77_12620 AMW43019 2410652 2411581 - efflux_transporter_periplasmic_adaptor_subunit ARC77_12625 AMW46006 2411589 2411792 - transporter ARC77_12630 AMW43020 2411975 2412904 + transcriptional_regulator ARC77_12635 AMW43021 2413038 2414483 - metalloprotease_TldD tldD AMW43022 2414639 2418439 - hypothetical_protein ARC77_12645 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AMW42998 100 723 100.0 0.0 PJR32595.1 AMW42999 100 318 100.0 6e-109 PJR32596.1 AMW43000 100 570 100.0 0.0 PJR32597.1 AMW43001 100 461 100.0 2e-162 PJR32598.1 AMW43002 100 993 100.0 0.0 PJR32599.1 AMW43003 100 611 100.0 0.0 PJR32600.1 AMW43004 100 537 100.0 0.0 >> 24. CP012802_0 Source: Escherichia coli O157:H7 strain WS4202, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: ALH92462 3955996 3956982 + D-arabinose_5-phosphate_isomerase AO055_20375 ALH92463 3957003 3957569 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase AO055_20380 ALH92464 3957566 3958141 + LPS_export_ABC_transporter_periplasmic_protein LptC AO055_20385 ALH92465 3958110 3958667 + lipopolysaccharide_transporter AO055_20390 ALH92466 3958674 3959399 + LPS_export_ABC_transporter_ATP-binding_protein AO055_20395 ALH92467 3959447 3960880 + RNA_polymerase_sigma-54_factor AO055_20400 ALH92468 3960903 3961190 + hypothetical_protein AO055_20405 ALH92469 3961308 3961799 + transcriptional_regulator AO055_20410 ALH92470 3961845 3962699 + glmZ(sRNA)-inactivating_NTPase AO055_20415 ALH92471 3962696 3962968 + phosphohistidinoprotein-hexose phosphotransferase AO055_20420 ALH92472 3963182 3963814 + hypothetical_protein AO055_20425 ALH92473 3963811 3964539 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA ALH92474 3964536 3965189 - isoprenoid_biosynthesis_protein AO055_20435 ALH92475 3965419 3967755 - aerobic_respiration_control_sensor_protein_ArcB AO055_20440 ALH93902 3967851 3968780 - radical_SAM_protein AO055_20445 ALH93903 3969454 3973914 + glutamate_synthase gltB ALH92476 3973927 3975345 + glutamate_synthase AO055_20455 ALH92477 3975529 3976578 + hypothetical_protein AO055_20460 ALH92478 3976638 3977102 - hypothetical_protein AO055_20465 ALH92479 3977099 3977974 - N-acetylmannosamine_kinase AO055_20470 ALH92480 3977971 3978660 - N-acetylmannosamine-6-phosphate_2-epimerase AO055_20475 ALH92481 3978708 3980198 - sialic_acid_transporter AO055_20480 ALH92482 3980307 3981200 - N-acetylneuraminate_lyase AO055_20485 ALH92483 3981322 3982113 - transcriptional_regulator_NanR AO055_20490 ALH92484 3982493 3983857 + C4-dicarboxylate_ABC_transporter AO055_20495 ALH92485 3983892 3984389 - Clp_protease_ClpP AO055_20500 ALH92486 3984395 3985033 - stringent_starvation_protein_A sspA ALH92487 3985428 3985820 - 30S_ribosomal_protein_S9 AO055_20510 ALH92488 3985836 3986264 - 50S_ribosomal_protein_L13 AO055_20515 ALH92489 3986483 3987610 - hypothetical_protein AO055_20520 ALH92490 3987804 3988202 + hypothetical_protein AO055_20525 ALH92491 3988356 3989723 + serine_endoprotease_DegQ AO055_20530 ALH92492 3989813 3990880 + serine_endoprotease AO055_20535 ALH92493 3990944 3991882 - malate_dehydrogenase AO055_20540 ALH92494 3992317 3992787 + arginine_repressor AO055_20545 ALH92495 3993152 3993415 + hypothetical_protein AO055_20550 ALH92496 3993471 3993743 - hypothetical_protein AO055_20555 ALH92497 3993835 3995802 - p-hydroxybenzoic_acid_efflux_subunit_AaeB AO055_20560 ALH92498 3995808 3996737 - p-hydroxybenzoic_acid_efflux_subunit_AaeA AO055_20565 ALH93904 3996745 3996948 - transporter AO055_20570 ALH92499 3997131 3998060 + transcriptional_regulator AO055_20575 ALH92500 3998194 3999639 - protease_TldD tldD ALH92501 3999795 4003595 - hypothetical_protein AO055_20585 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ALH92477 100 723 100.0 0.0 PJR32595.1 ALH92478 100 318 100.0 6e-109 PJR32596.1 ALH92479 100 570 100.0 0.0 PJR32597.1 ALH92480 100 461 100.0 2e-162 PJR32598.1 ALH92481 100 993 100.0 0.0 PJR32599.1 ALH92482 100 611 100.0 0.0 PJR32600.1 ALH92483 100 537 100.0 0.0 >> 25. BA000007_0 Source: Escherichia coli O157:H7 str. Sakai DNA, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4213 Table of genes, locations, strands and annotations of subject cluster: BAB37499 4083747 4084733 + D-arabinose_5-phosphate_isomerase kdsD BAB37500 4084754 4085320 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC BAB37501 4085317 4085892 + periplasmic_membrane-anchored_LPS-binding protein lptC BAB37502 4085861 4086418 + lipopolysaccharide_export_system_protein_LptA lptA BAB37503 4086425 4087150 + lipopolysaccharide_export_ABC_transporter ATPase lptB BAB37504 4087198 4088631 + RNA_polymerase_sigma_54_factor_RpoN rpoN BAB37505 4088654 4088941 + ribosome_hibernation_promoting_factor_HPF hpf BAB37506 4089059 4089550 + sugar-specific_enzyme_IIA_component_of_PTS ptsN BAB37507 4089596 4090450 + nucleotide-binding_protein yhbJ BAB37508 4090447 4090719 + phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system npr BAB37509 4090933 4091565 + Mg(2+)-starvation-stimulated_protein yrbL BAB37510 4091562 4092290 - biosynthetic_peptidoglycan_transglycosylase mtgA BAB37511 4092287 4092940 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB BAB37512 4093170 4095506 - aerobic_respiration_control_sensor_histidine protein kinase arcB BAB37513 4095602 4096531 - Fe-S_oxidoreductase yhcC BAB37514 4097112 4101665 + glutamate_synthase_large_subunit gltB BAB37515 4101678 4103096 + glutamate_synthase_small_subunit gltD BAB37516 4103280 4104329 + hypothetical_protein yhcG BAB37517 4104389 4104853 - hypothetical_protein yhcH BAB37518 4104850 4105725 - N-acetylmannosamine_kinase nanK BAB37519 4105722 4106411 - N-acetylmannosamine-6-P_epimerase nanE BAB37520 4106459 4107949 - sialic_acid_transporter nanT BAB37521 4108058 4108951 - N-acetylneuraminate_lyase nanA BAB37522 4109073 4109864 - sialic_acid-inducible_nan_operon_repressor nanR BAB37523 4110244 4111608 + transporter dcuD BAB37524 4111643 4112140 - ClpXP_protease_specificity_enhancing_factor sspB BAB37525 4112146 4112784 - stringent_starvation_protein_A sspA BAB37526 4113179 4113571 - 30S_ribosomal_subunit_protein_S9 rpsI BAB37527 4113587 4114015 - 50S_ribosomal_subunit_protein_L13 rplM BAB37528 4114234 4115361 - cell_division_protein_ZapE zapE BAB37529 4115555 4115953 + inner_membrane-anchored_protein yhcB BAB37530 4116107 4117474 + serine_endoprotease degQ BAB37531 4117564 4118631 + serine_endoprotease degS BAB37532 4118695 4119633 - malate_dehydrogenase mdh BAB37533 4120068 4120538 + l-arginine-responsive_arginine_metabolism regulon transcriptional regulator argR BAB37534 4120903 4121166 + cadmium_and_peroxide_resistance_protein yhcN BAB37535 4121222 4121494 - barnase_inhibitor yhcO BAB37536 4121586 4123553 - p-hydroxybenzoic_acid_efflux_system_component aaeB BAB37537 4123559 4124488 - p-hydroxybenzoic_acid_efflux_system_component aaeA BAB37538 4124496 4124699 - hypothetical_protein yhcR BAB37539 4124882 4125811 + transcriptional_regulator aaeR BAB37540 4125945 4127390 - protease_TldD tldD BAB37541 4127546 4131346 - hypothetical_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 BAB37516 100 723 100.0 0.0 PJR32595.1 BAB37517 100 318 100.0 6e-109 PJR32596.1 BAB37518 100 570 100.0 0.0 PJR32597.1 BAB37519 100 461 100.0 2e-162 PJR32598.1 BAB37520 100 993 100.0 0.0 PJR32599.1 BAB37521 100 611 100.0 0.0 PJR32600.1 BAB37522 100 537 100.0 0.0 >> 26. CP040316_0 Source: Escherichia coli strain CV261 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QFX41330 4805766 4806752 + arabinose-5-phosphate_isomerase_KdsD kdsD QFX41331 4806773 4807339 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QFX41332 4807336 4807911 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFX41333 4807880 4808437 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFX41334 4808444 4809169 + LPS_export_ABC_transporter_ATP-binding_protein lptB QFX41335 4809217 4810650 + RNA_polymerase_factor_sigma-54 rpoN QFX41336 4810673 4810960 + ribosome_hibernation_promoting_factor FEL12_24485 QFX41337 4811078 4811569 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFX41338 4811615 4812469 + RNase_adapter_RapZ rapZ QFX41339 4812466 4812738 + PTS_phosphocarrier_protein_NPr npr QFX41340 4812952 4813584 + PhoP_regulatory_network_protein_YrbL yrbL QFX41341 4813581 4814309 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QFX41342 4814306 4814959 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QFX41343 4815189 4817525 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QFX41344 4817621 4818550 - TIGR01212_family_radical_SAM_protein FEL12_24525 QFX42156 4819224 4823684 + glutamate_synthase_large_subunit gltB QFX41345 4823697 4825115 + glutamate_synthase_small_subunit FEL12_24535 QFX41346 4825299 4826426 + DUF1016_domain-containing_protein FEL12_24540 QFX41347 4826486 4826950 - DUF386_domain-containing_protein FEL12_24545 QFX41348 4826947 4827822 - N-acetylmannosamine_kinase FEL12_24550 QFX41349 4827819 4828508 - N-acetylmannosamine-6-phosphate_2-epimerase FEL12_24555 QFX41350 4828556 4830046 - sialic_acid_transporter_NanT nanT QFX41351 4830155 4831048 - N-acetylneuraminate_lyase nanA QFX41352 4831170 4831961 - transcriptional_regulator_NanR nanR QFX41353 4832341 4833705 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QFX41354 4833740 4834237 - ClpXP_protease_specificity-enhancing_factor sspB QFX41355 4834243 4834881 - stringent_starvation_protein_A sspA QFX41356 4835137 4835358 + hypothetical_protein FEL12_24590 QFX41357 4835276 4835668 - 30S_ribosomal_protein_S9 rpsI QFX41358 4835684 4836112 - 50S_ribosomal_protein_L13 rplM QFX41359 4836331 4837458 - cell_division_protein_ZapE FEL12_24605 QFX41360 4837652 4838050 + DUF1043_family_protein FEL12_24610 QFX41361 4838204 4839571 + serine_endoprotease_DegQ degQ QFX41362 4839661 4840728 + serine_endoprotease_DegS FEL12_24620 QFX41363 4840792 4841730 - malate_dehydrogenase mdh QFX41364 4842165 4842635 + transcriptional_regulator_ArgR argR QFX41365 4843000 4843263 + peroxide/acid_stress_response_protein_YhcN yhcN QFX41366 4843319 4843591 - hypothetical_protein FEL12_24640 QFX41367 4843683 4845650 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFX41368 4845656 4846585 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFX41369 4846593 4846796 - DUF1656_domain-containing_protein FEL12_24655 QFX41370 4846979 4847908 + HTH-type_transcriptional_activator_AaeR aaeR QFX41371 4848042 4849487 - metalloprotease_TldD tldD QFX41372 4849643 4853443 - AsmA2_domain-containing_protein FEL12_24670 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QFX41346 93 709 107.449856734 0.0 PJR32595.1 QFX41347 100 318 100.0 6e-109 PJR32596.1 QFX41348 100 570 100.0 0.0 PJR32597.1 QFX41349 100 461 100.0 2e-162 PJR32598.1 QFX41350 100 993 100.0 0.0 PJR32599.1 QFX41351 100 611 100.0 0.0 PJR32600.1 QFX41352 100 537 100.0 0.0 >> 27. CP040313_0 Source: Escherichia coli strain M7638 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QFW87523 4762596 4763582 + arabinose-5-phosphate_isomerase_KdsD kdsD QFW87524 4763603 4764169 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QFW87525 4764166 4764741 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFW87526 4764710 4765267 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFW87527 4765274 4765999 + LPS_export_ABC_transporter_ATP-binding_protein lptB QFW87528 4766047 4767480 + RNA_polymerase_factor_sigma-54 rpoN QFW87529 4767503 4767790 + ribosome_hibernation_promoting_factor FEL02_24200 QFW87530 4767908 4768399 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFW87531 4768445 4769299 + RNase_adapter_RapZ rapZ QFW87532 4769296 4769568 + PTS_phosphocarrier_protein_NPr npr QFW87533 4769782 4770414 + PhoP_regulatory_network_protein_YrbL yrbL QFW87534 4770411 4771139 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QFW87535 4771136 4771789 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QFW87536 4772019 4774355 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QFW87537 4774451 4775380 - TIGR01212_family_radical_SAM_protein FEL02_24240 QFW88332 4776054 4780514 + glutamate_synthase_large_subunit gltB QFW87538 4780527 4781945 + glutamate_synthase_small_subunit FEL02_24250 QFW87539 4782129 4783256 + DUF1016_domain-containing_protein FEL02_24255 QFW87540 4783316 4783780 - DUF386_domain-containing_protein FEL02_24260 QFW87541 4783777 4784652 - N-acetylmannosamine_kinase FEL02_24265 QFW87542 4784649 4785338 - N-acetylmannosamine-6-phosphate_2-epimerase FEL02_24270 QFW87543 4785386 4786876 - sialic_acid_transporter_NanT nanT QFW87544 4786985 4787878 - N-acetylneuraminate_lyase nanA QFW87545 4788000 4788791 - transcriptional_regulator_NanR nanR QFW87546 4789171 4790535 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QFW87547 4790570 4791067 - ClpXP_protease_specificity-enhancing_factor sspB QFW87548 4791073 4791711 - stringent_starvation_protein_A sspA QFW87549 4791967 4792188 + hypothetical_protein FEL02_24305 QFW87550 4792106 4792498 - 30S_ribosomal_protein_S9 rpsI QFW87551 4792514 4792942 - 50S_ribosomal_protein_L13 rplM QFW87552 4793161 4794288 - cell_division_protein_ZapE FEL02_24320 QFW87553 4794482 4794880 + DUF1043_family_protein FEL02_24325 QFW87554 4795034 4796401 + serine_endoprotease_DegQ degQ QFW87555 4796491 4797558 + serine_endoprotease_DegS FEL02_24335 QFW87556 4797622 4798560 - malate_dehydrogenase mdh QFW87557 4798995 4799465 + transcriptional_regulator_ArgR argR QFW87558 4799830 4800093 + peroxide/acid_stress_response_protein_YhcN yhcN QFW87559 4800149 4800421 - hypothetical_protein FEL02_24355 QFW87560 4800513 4802480 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFW87561 4802486 4803415 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFW87562 4803423 4803626 - DUF1656_domain-containing_protein FEL02_24370 QFW87563 4803809 4804738 + HTH-type_transcriptional_activator_AaeR aaeR QFW87564 4804872 4806317 - metalloprotease_TldD tldD QFW87565 4806473 4810273 - AsmA2_domain-containing_protein FEL02_24385 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QFW87539 93 709 107.449856734 0.0 PJR32595.1 QFW87540 100 318 100.0 6e-109 PJR32596.1 QFW87541 100 570 100.0 0.0 PJR32597.1 QFW87542 100 461 100.0 2e-162 PJR32598.1 QFW87543 100 993 100.0 0.0 PJR32599.1 QFW87544 100 611 100.0 0.0 PJR32600.1 QFW87545 100 537 100.0 0.0 >> 28. CP040309_0 Source: Escherichia coli strain 21B8 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QFW19752 4766224 4767210 + arabinose-5-phosphate_isomerase_KdsD kdsD QFW19753 4767231 4767797 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QFW19754 4767794 4768369 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFW19755 4768338 4768895 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFW19756 4768902 4769627 + LPS_export_ABC_transporter_ATP-binding_protein lptB QFW19757 4769675 4771108 + RNA_polymerase_factor_sigma-54 rpoN QFW19758 4771131 4771418 + ribosome_hibernation_promoting_factor FEK99_24195 QFW19759 4771536 4772027 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFW19760 4772073 4772927 + RNase_adapter_RapZ rapZ QFW19761 4772924 4773196 + PTS_phosphocarrier_protein_NPr npr QFW19762 4773410 4774042 + PhoP_regulatory_network_protein_YrbL yrbL QFW19763 4774039 4774767 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QFW19764 4774764 4775417 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QFW19765 4775647 4777983 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QFW19766 4778079 4779008 - TIGR01212_family_radical_SAM_protein FEK99_24235 QFW20561 4779682 4784142 + glutamate_synthase_large_subunit gltB QFW19767 4784155 4785573 + glutamate_synthase_small_subunit FEK99_24245 QFW19768 4785757 4786884 + DUF1016_domain-containing_protein FEK99_24250 QFW19769 4786944 4787408 - DUF386_domain-containing_protein FEK99_24255 QFW19770 4787405 4788280 - N-acetylmannosamine_kinase FEK99_24260 QFW19771 4788277 4788966 - N-acetylmannosamine-6-phosphate_2-epimerase FEK99_24265 QFW19772 4789014 4790504 - sialic_acid_transporter_NanT nanT QFW19773 4790613 4791506 - N-acetylneuraminate_lyase nanA QFW19774 4791628 4792419 - transcriptional_regulator_NanR nanR QFW19775 4792799 4794163 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QFW19776 4794198 4794695 - ClpXP_protease_specificity-enhancing_factor sspB QFW19777 4794701 4795339 - stringent_starvation_protein_A sspA QFW19778 4795595 4795816 + hypothetical_protein FEK99_24300 QFW19779 4795734 4796126 - 30S_ribosomal_protein_S9 rpsI QFW19780 4796142 4796570 - 50S_ribosomal_protein_L13 rplM QFW19781 4796789 4797916 - cell_division_protein_ZapE FEK99_24315 QFW19782 4798110 4798508 + DUF1043_family_protein FEK99_24320 QFW19783 4798662 4800029 + serine_endoprotease_DegQ degQ QFW19784 4800119 4801186 + serine_endoprotease_DegS FEK99_24330 QFW19785 4801250 4802188 - malate_dehydrogenase mdh QFW19786 4802623 4803093 + transcriptional_regulator_ArgR argR QFW19787 4803458 4803721 + peroxide/acid_stress_response_protein_YhcN yhcN QFW19788 4803777 4804049 - hypothetical_protein FEK99_24350 QFW19789 4804141 4806108 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFW19790 4806114 4807043 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFW19791 4807051 4807254 - DUF1656_domain-containing_protein FEK99_24365 QFW19792 4807437 4808366 + HTH-type_transcriptional_activator_AaeR aaeR QFW19793 4808500 4809945 - metalloprotease_TldD tldD QFW19794 4810101 4813901 - AsmA2_domain-containing_protein FEK99_24380 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QFW19768 93 709 107.449856734 0.0 PJR32595.1 QFW19769 100 318 100.0 6e-109 PJR32596.1 QFW19770 100 570 100.0 0.0 PJR32597.1 QFW19771 100 461 100.0 2e-162 PJR32598.1 QFW19772 100 993 100.0 0.0 PJR32599.1 QFW19773 100 611 100.0 0.0 PJR32600.1 QFW19774 100 537 100.0 0.0 >> 29. CP040307_0 Source: Escherichia coli strain F1 E4 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QFW00897 4860609 4861595 + arabinose-5-phosphate_isomerase_KdsD kdsD QFW00898 4861616 4862182 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QFW00899 4862179 4862754 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFW00900 4862723 4863280 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFW00901 4863287 4864012 + LPS_export_ABC_transporter_ATP-binding_protein lptB QFW00902 4864060 4865493 + RNA_polymerase_factor_sigma-54 rpoN QFW00903 4865516 4865803 + ribosome_hibernation_promoting_factor FEL01_24840 QFW00904 4865921 4866412 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFW00905 4866458 4867312 + RNase_adapter_RapZ rapZ QFW00906 4867309 4867581 + PTS_phosphocarrier_protein_NPr npr QFW00907 4867795 4868427 + PhoP_regulatory_network_protein_YrbL yrbL QFW00908 4868424 4869152 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QFW00909 4869149 4869802 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QFW00910 4870032 4872368 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QFW00911 4872464 4873393 - TIGR01212_family_radical_SAM_protein FEL01_24880 QFW01714 4874067 4878527 + glutamate_synthase_large_subunit gltB QFW00912 4878540 4879958 + glutamate_synthase_small_subunit FEL01_24890 QFW00913 4880142 4881269 + DUF1016_domain-containing_protein FEL01_24895 QFW00914 4881329 4881793 - DUF386_domain-containing_protein FEL01_24900 QFW00915 4881790 4882665 - N-acetylmannosamine_kinase FEL01_24905 QFW00916 4882662 4883351 - N-acetylmannosamine-6-phosphate_2-epimerase FEL01_24910 QFW00917 4883399 4884889 - sialic_acid_transporter_NanT nanT QFW00918 4884998 4885891 - N-acetylneuraminate_lyase nanA QFW00919 4886013 4886804 - transcriptional_regulator_NanR nanR QFW00920 4887184 4888548 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QFW00921 4888583 4889080 - ClpXP_protease_specificity-enhancing_factor sspB QFW00922 4889086 4889724 - stringent_starvation_protein_A sspA QFW00923 4889980 4890201 + hypothetical_protein FEL01_24945 QFW00924 4890119 4890511 - 30S_ribosomal_protein_S9 rpsI QFW00925 4890527 4890955 - 50S_ribosomal_protein_L13 rplM QFW00926 4891174 4892301 - cell_division_protein_ZapE FEL01_24960 QFW00927 4892495 4892893 + DUF1043_family_protein FEL01_24965 QFW00928 4893047 4894414 + serine_endoprotease_DegQ degQ QFW00929 4894504 4895571 + serine_endoprotease_DegS FEL01_24975 QFW00930 4895635 4896573 - malate_dehydrogenase mdh QFW00931 4897008 4897478 + transcriptional_regulator_ArgR argR QFW00932 4897843 4898106 + peroxide/acid_stress_response_protein_YhcN yhcN QFW00933 4898162 4898434 - hypothetical_protein FEL01_24995 QFW00934 4898526 4900493 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFW00935 4900499 4901428 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFW00936 4901436 4901639 - DUF1656_domain-containing_protein FEL01_25010 QFW00937 4901822 4902751 + HTH-type_transcriptional_activator_AaeR aaeR QFW00938 4902885 4904330 - metalloprotease_TldD tldD QFW00939 4904486 4908286 - AsmA2_domain-containing_protein FEL01_25025 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QFW00913 93 709 107.449856734 0.0 PJR32595.1 QFW00914 100 318 100.0 6e-109 PJR32596.1 QFW00915 100 570 100.0 0.0 PJR32597.1 QFW00916 100 461 100.0 2e-162 PJR32598.1 QFW00917 100 993 100.0 0.0 PJR32599.1 QFW00918 100 611 100.0 0.0 PJR32600.1 QFW00919 100 537 100.0 0.0 >> 30. CP040305_0 Source: Escherichia coli strain HB6 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QFV78020 4904365 4905351 + arabinose-5-phosphate_isomerase_KdsD kdsD QFV78021 4905372 4905938 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QFV78022 4905935 4906510 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFV78023 4906479 4907036 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFV78024 4907043 4907768 + LPS_export_ABC_transporter_ATP-binding_protein lptB QFV78025 4907816 4909249 + RNA_polymerase_factor_sigma-54 rpoN QFV78026 4909272 4909559 + ribosome_hibernation_promoting_factor FEL06_25220 QFV78027 4909677 4910168 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFV78028 4910214 4911068 + RNase_adapter_RapZ rapZ QFV78029 4911065 4911337 + PTS_phosphocarrier_protein_NPr npr QFV78030 4911551 4912183 + PhoP_regulatory_network_protein_YrbL yrbL QFV78031 4912180 4912908 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QFV78032 4912905 4913558 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QFV78033 4913788 4916124 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QFV78034 4916220 4917149 - TIGR01212_family_radical_SAM_protein FEL06_25260 QFV78833 4917823 4922283 + glutamate_synthase_large_subunit gltB QFV78035 4922296 4923714 + glutamate_synthase_small_subunit FEL06_25270 QFV78036 4923898 4925025 + DUF1016_domain-containing_protein FEL06_25275 QFV78037 4925085 4925549 - DUF386_domain-containing_protein FEL06_25280 QFV78038 4925546 4926421 - N-acetylmannosamine_kinase FEL06_25285 QFV78039 4926418 4927107 - N-acetylmannosamine-6-phosphate_2-epimerase FEL06_25290 QFV78040 4927155 4928645 - sialic_acid_transporter_NanT nanT QFV78041 4928754 4929647 - N-acetylneuraminate_lyase nanA QFV78042 4929769 4930560 - transcriptional_regulator_NanR nanR QFV78043 4930940 4932304 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QFV78044 4932339 4932836 - ClpXP_protease_specificity-enhancing_factor sspB QFV78045 4932842 4933480 - stringent_starvation_protein_A sspA QFV78046 4933736 4933957 + hypothetical_protein FEL06_25325 QFV78047 4933875 4934267 - 30S_ribosomal_protein_S9 rpsI QFV78048 4934283 4934711 - 50S_ribosomal_protein_L13 rplM QFV78049 4934930 4936057 - cell_division_protein_ZapE FEL06_25340 QFV78050 4936251 4936649 + DUF1043_family_protein FEL06_25345 QFV78051 4936803 4938170 + serine_endoprotease_DegQ degQ QFV78052 4938260 4939327 + serine_endoprotease_DegS FEL06_25355 QFV78053 4939391 4940329 - malate_dehydrogenase mdh QFV78054 4940764 4941234 + transcriptional_regulator_ArgR argR QFV78055 4941599 4941862 + peroxide/acid_stress_response_protein_YhcN yhcN QFV78056 4941918 4942190 - hypothetical_protein FEL06_25375 QFV78057 4942282 4944249 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFV78058 4944255 4945184 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFV78059 4945192 4945395 - DUF1656_domain-containing_protein FEL06_25390 QFV78060 4945578 4946507 + HTH-type_transcriptional_activator_AaeR aaeR QFV78061 4946641 4948086 - metalloprotease_TldD tldD QFV78062 4948242 4952042 - AsmA2_domain-containing_protein FEL06_25405 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QFV78036 93 709 107.449856734 0.0 PJR32595.1 QFV78037 100 318 100.0 6e-109 PJR32596.1 QFV78038 100 570 100.0 0.0 PJR32597.1 QFV78039 100 461 100.0 2e-162 PJR32598.1 QFV78040 100 993 100.0 0.0 PJR32599.1 QFV78041 100 611 100.0 0.0 PJR32600.1 QFV78042 100 537 100.0 0.0 >> 31. CP035366_0 Source: Escherichia coli O157:H7 strain C1-057 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QAV75424 4061359 4062345 + arabinose-5-phosphate_isomerase_KdsD kdsD QAV75425 4062366 4062932 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QAV75426 4062929 4063504 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QAV75427 4063473 4064030 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QAV75428 4064037 4064762 + lipopolysaccharide_ABC_transporter_ATP-binding protein ES669_21080 QAV75429 4064810 4066243 + RNA_polymerase_factor_sigma-54 ES669_21085 QAV75430 4066266 4066553 + ribosome_hibernation_promoting_factor ES669_21090 QAV75431 4066671 4067162 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QAV75432 4067208 4068062 + RNase_adapter_RapZ rapZ QAV75433 4068059 4068331 + PTS_phosphocarrier_protein_NPr ES669_21105 QAV75434 4068544 4069176 + PhoP_regulatory_network_protein_YrbL yrbL QAV75435 4069173 4069901 - monofunctional_biosynthetic_peptidoglycan transglycosylase ES669_21115 QAV75436 4070780 4073116 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QAV75437 4073212 4074141 - TIGR01212_family_radical_SAM_protein ES669_21130 QAV75438 4074815 4079275 + glutamate_synthase_large_subunit gltB QAV75439 4079288 4080706 + glutamate_synthase_small_subunit ES669_21140 QAV75440 4080890 4082017 + DUF1016_domain-containing_protein ES669_21145 QAV75441 4082077 4082541 - YhcH/YjgK/YiaL_family_protein ES669_21150 QAV75442 4082538 4083413 - N-acetylmannosamine_kinase ES669_21155 QAV75443 4083410 4084099 - N-acetylmannosamine-6-phosphate_2-epimerase ES669_21160 QAV75444 4084147 4085637 - MFS_transporter ES669_21165 QAV75445 4085746 4086639 - N-acetylneuraminate_lyase nanA QAV75446 4086761 4087552 - transcriptional_regulator_NanR ES669_21175 QAV75447 4087932 4089296 + C4-dicarboxylate_transporter_DcuC dcuC QAV75448 4089331 4089828 - ClpXP_protease_specificity-enhancing_factor sspB QAV75449 4089834 4090472 - stringent_starvation_protein_A ES669_21190 QAV75450 4090728 4090949 + hypothetical_protein ES669_21195 QAV75451 4090867 4091259 - 30S_ribosomal_protein_S9 ES669_21200 QAV75452 4091275 4091703 - 50S_ribosomal_protein_L13 ES669_21205 QAV75453 4091922 4093049 - cell_division_protein_ZapE zapE QAV75454 4093243 4093641 + DUF1043_family_protein ES669_21215 QAV75455 4093795 4095162 + serine_endoprotease_DegQ degQ QAV75456 4095252 4096319 + serine_endoprotease_DegS degS QAV75457 4096383 4097321 - malate_dehydrogenase ES669_21230 QAV75458 4097756 4098226 + transcriptional_regulator_ArgR argR QAV75459 4098591 4098854 + peroxide/acid_stress_response_protein_YhcN yhcN QAV75460 4098910 4099182 - hypothetical_protein ES669_21245 QAV75461 4099274 4101241 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QAV75462 4101247 4102176 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QAV75463 4102184 4102387 - DUF1656_domain-containing_protein ES669_21260 QAV75464 4102570 4103499 + HTH-type_transcriptional_activator_AaeR aaeR QAV75465 4103633 4105078 - metalloprotease_TldD tldD QAV75466 4105234 4109034 - AsmA2_domain-containing_protein ES669_21275 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QAV75440 93 709 107.449856734 0.0 PJR32595.1 QAV75441 100 318 100.0 6e-109 PJR32596.1 QAV75442 100 570 100.0 0.0 PJR32597.1 QAV75443 100 461 100.0 2e-162 PJR32598.1 QAV75444 100 993 100.0 0.0 PJR32599.1 QAV75445 100 611 100.0 0.0 PJR32600.1 QAV75446 100 537 100.0 0.0 >> 32. CP028680_0 Source: Escherichia coli strain 113 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QCN30095 592112 593557 + metalloprotease_TldD C9E42_03110 QCN30096 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E42_03115 QCN30097 594803 595006 + protein_AaeX C9E42_03120 QCN30098 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E42_03125 QCN30099 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E42_03130 QCN30100 598008 598280 + hypothetical_protein C9E42_03135 QCN30101 598336 598599 - DUF1471_domain-containing_protein C9E42_03140 QCN30102 598964 599434 - arginine_repressor C9E42_03145 QCN30103 599869 600807 + malate_dehydrogenase C9E42_03150 QCN30104 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E42_03155 QCN30105 602028 603395 - serine_endoprotease_DegQ C9E42_03160 QCN30106 603549 603947 - hypothetical_protein C9E42_03165 QCN30107 604141 605268 + cell_division_protein_ZapE C9E42_03170 QCN30108 605487 605915 + 50S_ribosomal_protein_L13 C9E42_03175 QCN30109 605931 606323 + 30S_ribosomal_protein_S9 C9E42_03180 QCN30110 606241 606462 - hypothetical_protein C9E42_03185 QCN34664 606436 606615 + hypothetical_protein C9E42_03190 QCN34663 606567 606776 - hypothetical_protein C9E42_03195 QCN30111 606718 607356 + stringent_starvation_protein_A C9E42_03200 QCN30112 607362 607859 + stringent_starvation_protein_B C9E42_03205 QCN30113 607894 609258 - C4-dicarboxylate_ABC_transporter C9E42_03210 C9E42_03215 609258 609368 + transposase no_locus_tag QCN30114 609638 610429 + transcriptional_regulator_NanR nanR QCN30115 610560 611453 + N-acetylneuraminate_lyase nanA QCN30116 611562 613052 + MFS_transporter C9E42_03230 QCN30117 613100 613789 + N-acetylmannosamine-6-phosphate_2-epimerase C9E42_03235 QCN30118 613786 614661 + N-acetylmannosamine_kinase C9E42_03240 QCN30119 614658 615122 + YhcH/YjgK/YiaL_family_protein C9E42_03245 QCN30120 615182 616309 - DUF1016_domain-containing_protein C9E42_03250 QCN30121 616493 617911 - glutamate_synthase_small_subunit C9E42_03255 QCN30122 617924 622384 - glutamate_synthase_large_subunit C9E42_03260 C9E42_03265 622307 622533 + hypothetical_protein no_locus_tag QCN30123 622431 622667 + hypothetical_protein C9E42_03270 QCN34665 623058 623987 + TIGR01212_family_radical_SAM_protein C9E42_03275 QCN30124 624083 626419 + hybrid_sensor_histidine_kinase/response regulator C9E42_03280 QCN30125 626649 627302 + isoprenoid_biosynthesis_protein_ElbB C9E42_03285 QCN30126 627299 628027 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E42_03290 QCN30127 628024 628656 - protein_YrbL yrbL QCN30128 628870 629142 - phosphocarrier_protein_NPr C9E42_03300 QCN30129 629139 629993 - RNase_adaptor_protein_RapZ C9E42_03305 QCN30130 630039 630530 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E42_03310 QCN30131 630648 630935 - ribosome_hibernation_promoting_factor C9E42_03315 QCN30132 630958 632391 - RNA_polymerase_sigma-54_factor C9E42_03320 QCN30133 632439 633164 - ABC_transporter_ATP-binding_protein C9E42_03325 QCN30134 633171 633728 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E42_03330 QCN30135 633697 634272 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCN30136 634269 634835 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCN30137 634856 635842 - arabinose_5-phosphate_isomerase_KdsD C9E42_03345 QCN30138 635856 636833 - calcium/sodium_antiporter C9E42_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCN30120 93 709 107.449856734 0.0 PJR32595.1 QCN30119 100 318 100.0 6e-109 PJR32596.1 QCN30118 100 570 100.0 0.0 PJR32597.1 QCN30117 100 461 100.0 2e-162 PJR32598.1 QCN30116 100 993 100.0 0.0 PJR32599.1 QCN30115 100 611 100.0 0.0 PJR32600.1 QCN30114 100 537 100.0 0.0 >> 33. CP028677_0 Source: Escherichia coli strain 114 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QCN24606 592112 593557 + metalloprotease_TldD C9E43_03105 QCN24607 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E43_03110 QCN24608 594803 595006 + protein_AaeX C9E43_03115 QCN24609 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E43_03120 QCN24610 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E43_03125 QCN24611 598008 598280 + hypothetical_protein C9E43_03130 QCN24612 598336 598599 - DUF1471_domain-containing_protein C9E43_03135 QCN24613 598964 599434 - arginine_repressor C9E43_03140 QCN24614 599869 600807 + malate_dehydrogenase C9E43_03145 QCN24615 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E43_03150 QCN24616 602028 603395 - serine_endoprotease_DegQ C9E43_03155 QCN24617 603549 603947 - hypothetical_protein C9E43_03160 QCN24618 604141 605268 + cell_division_protein_ZapE C9E43_03165 QCN24619 605487 605915 + 50S_ribosomal_protein_L13 C9E43_03170 QCN24620 605931 606323 + 30S_ribosomal_protein_S9 C9E43_03175 QCN24621 606241 606462 - hypothetical_protein C9E43_03180 QCN29179 606436 606615 + hypothetical_protein C9E43_03185 QCN29178 606567 606776 - hypothetical_protein C9E43_03190 QCN24622 606718 607356 + stringent_starvation_protein_A C9E43_03195 QCN24623 607362 607859 + stringent_starvation_protein_B C9E43_03200 QCN24624 607894 609258 - C4-dicarboxylate_ABC_transporter C9E43_03205 C9E43_03210 609258 609368 + transposase no_locus_tag QCN24625 609638 610429 + transcriptional_regulator_NanR nanR QCN24626 610551 611444 + N-acetylneuraminate_lyase nanA QCN24627 611553 613043 + MFS_transporter C9E43_03225 QCN24628 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E43_03230 QCN24629 613777 614652 + N-acetylmannosamine_kinase C9E43_03235 QCN24630 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E43_03240 QCN24631 615173 616300 - DUF1016_domain-containing_protein C9E43_03245 QCN24632 616484 617902 - glutamate_synthase_small_subunit C9E43_03250 QCN24633 617915 622375 - glutamate_synthase_large_subunit C9E43_03255 C9E43_03260 622298 622524 + hypothetical_protein no_locus_tag QCN24634 622422 622658 + hypothetical_protein C9E43_03265 QCN29180 623049 623978 + TIGR01212_family_radical_SAM_protein C9E43_03270 QCN24635 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E43_03275 QCN24636 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E43_03280 QCN24637 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E43_03285 QCN24638 628015 628647 - protein_YrbL yrbL QCN24639 628861 629133 - phosphocarrier_protein_NPr C9E43_03295 QCN24640 629130 629984 - RNase_adaptor_protein_RapZ C9E43_03300 QCN24641 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E43_03305 QCN24642 630639 630926 - ribosome_hibernation_promoting_factor C9E43_03310 QCN24643 630949 632382 - RNA_polymerase_sigma-54_factor C9E43_03315 QCN24644 632430 633155 - ABC_transporter_ATP-binding_protein C9E43_03320 QCN24645 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E43_03325 QCN24646 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCN24647 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCN24648 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E43_03340 QCN24649 635847 636824 - calcium/sodium_antiporter C9E43_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCN24631 93 709 107.449856734 0.0 PJR32595.1 QCN24630 100 318 100.0 6e-109 PJR32596.1 QCN24629 100 570 100.0 0.0 PJR32597.1 QCN24628 100 461 100.0 2e-162 PJR32598.1 QCN24627 100 993 100.0 0.0 PJR32599.1 QCN24626 100 611 100.0 0.0 PJR32600.1 QCN24625 100 537 100.0 0.0 >> 34. CP028674_0 Source: Escherichia coli strain 115 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QCN19197 592112 593557 + metalloprotease_TldD C9E44_03105 QCN19198 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E44_03110 QCN19199 594803 595006 + protein_AaeX C9E44_03115 QCN19200 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E44_03120 QCN19201 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E44_03125 QCN19202 598008 598280 + hypothetical_protein C9E44_03130 QCN19203 598336 598599 - DUF1471_domain-containing_protein C9E44_03135 QCN19204 598964 599434 - arginine_repressor C9E44_03140 QCN19205 599869 600807 + malate_dehydrogenase C9E44_03145 QCN19206 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E44_03150 QCN19207 602028 603395 - serine_endoprotease_DegQ C9E44_03155 QCN19208 603549 603947 - hypothetical_protein C9E44_03160 QCN19209 604141 605268 + cell_division_protein_ZapE C9E44_03165 QCN19210 605487 605915 + 50S_ribosomal_protein_L13 C9E44_03170 QCN19211 605931 606323 + 30S_ribosomal_protein_S9 C9E44_03175 QCN19212 606241 606462 - hypothetical_protein C9E44_03180 QCN23701 606436 606615 + hypothetical_protein C9E44_03185 QCN23700 606567 606776 - hypothetical_protein C9E44_03190 QCN19213 606718 607356 + stringent_starvation_protein_A C9E44_03195 QCN19214 607362 607859 + stringent_starvation_protein_B C9E44_03200 QCN19215 607894 609258 - C4-dicarboxylate_ABC_transporter C9E44_03205 C9E44_03210 609258 609368 + transposase no_locus_tag QCN19216 609638 610429 + transcriptional_regulator_NanR nanR QCN19217 610551 611444 + N-acetylneuraminate_lyase nanA QCN19218 611553 613043 + MFS_transporter C9E44_03225 QCN19219 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E44_03230 QCN19220 613777 614652 + N-acetylmannosamine_kinase C9E44_03235 QCN19221 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E44_03240 QCN19222 615173 616300 - DUF1016_domain-containing_protein C9E44_03245 QCN19223 616484 617902 - glutamate_synthase_small_subunit C9E44_03250 QCN19224 617915 622375 - glutamate_synthase_large_subunit C9E44_03255 C9E44_03260 622298 622524 + hypothetical_protein no_locus_tag QCN19225 622422 622658 + hypothetical_protein C9E44_03265 QCN23702 623049 623978 + TIGR01212_family_radical_SAM_protein C9E44_03270 QCN19226 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E44_03275 QCN19227 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E44_03280 QCN19228 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E44_03285 QCN19229 628015 628647 - protein_YrbL yrbL QCN19230 628861 629133 - phosphocarrier_protein_NPr C9E44_03295 QCN19231 629130 629984 - RNase_adaptor_protein_RapZ C9E44_03300 QCN19232 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E44_03305 QCN19233 630639 630926 - ribosome_hibernation_promoting_factor C9E44_03310 QCN19234 630949 632382 - RNA_polymerase_sigma-54_factor C9E44_03315 QCN19235 632430 633155 - ABC_transporter_ATP-binding_protein C9E44_03320 QCN19236 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E44_03325 QCN19237 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCN19238 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCN19239 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E44_03340 QCN19240 635847 636824 - calcium/sodium_antiporter C9E44_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCN19222 93 709 107.449856734 0.0 PJR32595.1 QCN19221 100 318 100.0 6e-109 PJR32596.1 QCN19220 100 570 100.0 0.0 PJR32597.1 QCN19219 100 461 100.0 2e-162 PJR32598.1 QCN19218 100 993 100.0 0.0 PJR32599.1 QCN19217 100 611 100.0 0.0 PJR32600.1 QCN19216 100 537 100.0 0.0 >> 35. CP028671_0 Source: Escherichia coli strain 116 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QCN13713 592111 593556 + metalloprotease_TldD C9E45_03110 QCN13714 593690 594619 - HTH-type_transcriptional_activator_AaeR C9E45_03115 QCN13715 594802 595005 + protein_AaeX C9E45_03120 QCN13716 595013 595942 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E45_03125 QCN13717 595948 597915 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E45_03130 QCN13718 598007 598279 + hypothetical_protein C9E45_03135 QCN13719 598335 598598 - DUF1471_domain-containing_protein C9E45_03140 QCN13720 598963 599433 - arginine_repressor C9E45_03145 QCN13721 599868 600806 + malate_dehydrogenase C9E45_03150 QCN13722 600870 601937 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E45_03155 QCN13723 602027 603394 - serine_endoprotease_DegQ C9E45_03160 QCN13724 603548 603946 - hypothetical_protein C9E45_03165 QCN13725 604140 605267 + cell_division_protein_ZapE C9E45_03170 QCN13726 605486 605914 + 50S_ribosomal_protein_L13 C9E45_03175 QCN13727 605930 606322 + 30S_ribosomal_protein_S9 C9E45_03180 QCN13728 606240 606461 - hypothetical_protein C9E45_03185 QCN18288 606435 606614 + hypothetical_protein C9E45_03190 QCN18287 606566 606775 - hypothetical_protein C9E45_03195 QCN13729 606717 607355 + stringent_starvation_protein_A C9E45_03200 QCN13730 607361 607858 + stringent_starvation_protein_B C9E45_03205 QCN13731 607893 609257 - C4-dicarboxylate_ABC_transporter C9E45_03210 C9E45_03215 609257 609367 + transposase no_locus_tag QCN13732 609637 610428 + transcriptional_regulator_NanR nanR QCN13733 610550 611443 + N-acetylneuraminate_lyase nanA QCN13734 611552 613042 + MFS_transporter C9E45_03230 QCN13735 613090 613779 + N-acetylmannosamine-6-phosphate_2-epimerase C9E45_03235 QCN13736 613776 614651 + N-acetylmannosamine_kinase C9E45_03240 QCN13737 614648 615112 + YhcH/YjgK/YiaL_family_protein C9E45_03245 QCN13738 615172 616299 - DUF1016_domain-containing_protein C9E45_03250 QCN13739 616483 617901 - glutamate_synthase_small_subunit C9E45_03255 QCN13740 617914 622374 - glutamate_synthase_large_subunit C9E45_03260 C9E45_03265 622297 622523 + hypothetical_protein no_locus_tag QCN13741 622421 622657 + hypothetical_protein C9E45_03270 QCN18289 623048 623977 + TIGR01212_family_radical_SAM_protein C9E45_03275 QCN13742 624073 626409 + hybrid_sensor_histidine_kinase/response regulator C9E45_03280 QCN13743 626639 627292 + isoprenoid_biosynthesis_protein_ElbB C9E45_03285 QCN13744 627289 628017 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E45_03290 QCN13745 628014 628646 - protein_YrbL yrbL QCN13746 628860 629132 - phosphocarrier_protein_NPr C9E45_03300 QCN13747 629129 629983 - RNase_adaptor_protein_RapZ C9E45_03305 QCN13748 630029 630520 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E45_03310 QCN13749 630638 630925 - ribosome_hibernation_promoting_factor C9E45_03315 QCN13750 630948 632381 - RNA_polymerase_sigma-54_factor C9E45_03320 QCN13751 632429 633154 - ABC_transporter_ATP-binding_protein C9E45_03325 QCN13752 633161 633718 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E45_03330 QCN13753 633687 634262 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCN13754 634259 634825 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCN13755 634846 635832 - arabinose_5-phosphate_isomerase_KdsD C9E45_03345 QCN13756 635846 636823 - calcium/sodium_antiporter C9E45_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCN13738 93 709 107.449856734 0.0 PJR32595.1 QCN13737 100 318 100.0 6e-109 PJR32596.1 QCN13736 100 570 100.0 0.0 PJR32597.1 QCN13735 100 461 100.0 2e-162 PJR32598.1 QCN13734 100 993 100.0 0.0 PJR32599.1 QCN13733 100 611 100.0 0.0 PJR32600.1 QCN13732 100 537 100.0 0.0 >> 36. CP028668_0 Source: Escherichia coli strain 117 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QCN08223 592112 593557 + metalloprotease_TldD C9E46_03105 QCN08224 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E46_03110 QCN08225 594803 595006 + protein_AaeX C9E46_03115 QCN08226 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E46_03120 QCN08227 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E46_03125 QCN08228 598008 598280 + hypothetical_protein C9E46_03130 QCN08229 598336 598599 - DUF1471_domain-containing_protein C9E46_03135 QCN08230 598964 599434 - arginine_repressor C9E46_03140 QCN08231 599869 600807 + malate_dehydrogenase C9E46_03145 QCN08232 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E46_03150 QCN08233 602028 603395 - serine_endoprotease_DegQ C9E46_03155 QCN08234 603549 603947 - hypothetical_protein C9E46_03160 QCN08235 604141 605268 + cell_division_protein_ZapE C9E46_03165 QCN08236 605487 605915 + 50S_ribosomal_protein_L13 C9E46_03170 QCN08237 605931 606323 + 30S_ribosomal_protein_S9 C9E46_03175 QCN08238 606241 606462 - hypothetical_protein C9E46_03180 QCN12793 606436 606615 + hypothetical_protein C9E46_03185 QCN12792 606567 606776 - hypothetical_protein C9E46_03190 QCN08239 606718 607356 + stringent_starvation_protein_A C9E46_03195 QCN08240 607362 607859 + stringent_starvation_protein_B C9E46_03200 QCN08241 607894 609258 - C4-dicarboxylate_ABC_transporter C9E46_03205 C9E46_03210 609258 609368 + transposase no_locus_tag QCN08242 609638 610429 + transcriptional_regulator_NanR nanR QCN08243 610551 611444 + N-acetylneuraminate_lyase nanA QCN08244 611553 613043 + MFS_transporter C9E46_03225 QCN08245 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E46_03230 QCN08246 613777 614652 + N-acetylmannosamine_kinase C9E46_03235 QCN08247 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E46_03240 QCN08248 615173 616300 - DUF1016_domain-containing_protein C9E46_03245 QCN08249 616484 617902 - glutamate_synthase_small_subunit C9E46_03250 QCN08250 617915 622375 - glutamate_synthase_large_subunit C9E46_03255 C9E46_03260 622298 622524 + hypothetical_protein no_locus_tag QCN08251 622422 622658 + hypothetical_protein C9E46_03265 QCN12794 623049 623978 + TIGR01212_family_radical_SAM_protein C9E46_03270 QCN08252 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E46_03275 QCN08253 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E46_03280 QCN08254 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E46_03285 QCN08255 628015 628647 - protein_YrbL yrbL QCN08256 628861 629133 - phosphocarrier_protein_NPr C9E46_03295 QCN08257 629130 629984 - RNase_adaptor_protein_RapZ C9E46_03300 QCN08258 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E46_03305 QCN08259 630639 630926 - ribosome_hibernation_promoting_factor C9E46_03310 QCN08260 630949 632382 - RNA_polymerase_sigma-54_factor C9E46_03315 QCN08261 632430 633155 - ABC_transporter_ATP-binding_protein C9E46_03320 QCN08262 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E46_03325 QCN08263 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCN08264 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCN08265 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E46_03340 QCN08266 635847 636824 - calcium/sodium_antiporter C9E46_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCN08248 93 709 107.449856734 0.0 PJR32595.1 QCN08247 100 318 100.0 6e-109 PJR32596.1 QCN08246 100 570 100.0 0.0 PJR32597.1 QCN08245 100 461 100.0 2e-162 PJR32598.1 QCN08244 100 993 100.0 0.0 PJR32599.1 QCN08243 100 611 100.0 0.0 PJR32600.1 QCN08242 100 537 100.0 0.0 >> 37. CP028665_0 Source: Escherichia coli strain 118 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QCN02740 592112 593557 + metalloprotease_TldD C9E47_03110 QCN02741 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E47_03115 QCN02742 594803 595006 + protein_AaeX C9E47_03120 QCN02743 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E47_03125 QCN02744 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E47_03130 QCN02745 598008 598280 + hypothetical_protein C9E47_03135 QCN02746 598336 598599 - DUF1471_domain-containing_protein C9E47_03140 QCN02747 598964 599434 - arginine_repressor C9E47_03145 QCN02748 599869 600807 + malate_dehydrogenase C9E47_03150 QCN02749 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E47_03155 QCN02750 602028 603395 - serine_endoprotease_DegQ C9E47_03160 QCN02751 603549 603947 - hypothetical_protein C9E47_03165 QCN02752 604141 605268 + cell_division_protein_ZapE C9E47_03170 QCN02753 605487 605915 + 50S_ribosomal_protein_L13 C9E47_03175 QCN02754 605931 606323 + 30S_ribosomal_protein_S9 C9E47_03180 QCN02755 606241 606462 - hypothetical_protein C9E47_03185 QCN07308 606436 606615 + hypothetical_protein C9E47_03190 QCN07307 606567 606776 - hypothetical_protein C9E47_03195 QCN02756 606718 607356 + stringent_starvation_protein_A C9E47_03200 QCN02757 607362 607859 + stringent_starvation_protein_B C9E47_03205 QCN02758 607894 609258 - C4-dicarboxylate_ABC_transporter C9E47_03210 C9E47_03215 609258 609368 + transposase no_locus_tag QCN02759 609638 610429 + transcriptional_regulator_NanR nanR QCN02760 610551 611444 + N-acetylneuraminate_lyase nanA QCN02761 611553 613043 + MFS_transporter C9E47_03230 QCN02762 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E47_03235 QCN02763 613777 614652 + N-acetylmannosamine_kinase C9E47_03240 QCN02764 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E47_03245 QCN02765 615173 616300 - DUF1016_domain-containing_protein C9E47_03250 QCN02766 616484 617902 - glutamate_synthase_small_subunit C9E47_03255 QCN02767 617915 622375 - glutamate_synthase_large_subunit C9E47_03260 C9E47_03265 622298 622524 + hypothetical_protein no_locus_tag QCN02768 622422 622658 + hypothetical_protein C9E47_03270 QCN07309 623049 623978 + TIGR01212_family_radical_SAM_protein C9E47_03275 QCN02769 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E47_03280 QCN02770 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E47_03285 QCN02771 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E47_03290 QCN02772 628015 628647 - protein_YrbL yrbL QCN02773 628861 629133 - phosphocarrier_protein_NPr C9E47_03300 QCN02774 629130 629984 - RNase_adaptor_protein_RapZ C9E47_03305 QCN02775 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E47_03310 QCN02776 630639 630926 - ribosome_hibernation_promoting_factor C9E47_03315 QCN02777 630949 632382 - RNA_polymerase_sigma-54_factor C9E47_03320 QCN02778 632430 633155 - ABC_transporter_ATP-binding_protein C9E47_03325 QCN02779 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E47_03330 QCN02780 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCN02781 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCN02782 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E47_03345 QCN02783 635847 636824 - calcium/sodium_antiporter C9E47_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCN02765 93 709 107.449856734 0.0 PJR32595.1 QCN02764 100 318 100.0 6e-109 PJR32596.1 QCN02763 100 570 100.0 0.0 PJR32597.1 QCN02762 100 461 100.0 2e-162 PJR32598.1 QCN02761 100 993 100.0 0.0 PJR32599.1 QCN02760 100 611 100.0 0.0 PJR32600.1 QCN02759 100 537 100.0 0.0 >> 38. CP028662_0 Source: Escherichia coli strain 119 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QCM97249 592112 593557 + metalloprotease_TldD C9E48_03110 QCM97250 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E48_03115 QCM97251 594803 595006 + DUF1656_domain-containing_protein C9E48_03120 QCM97252 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E48_03125 QCM97253 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E48_03130 QCM97254 598008 598280 + hypothetical_protein C9E48_03135 QCM97255 598336 598599 - DUF1471_domain-containing_protein C9E48_03140 QCM97256 598964 599434 - arginine_repressor C9E48_03145 QCM97257 599869 600807 + malate_dehydrogenase C9E48_03150 QCM97258 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E48_03155 QCM97259 602028 603395 - serine_endoprotease_DegQ C9E48_03160 QCM97260 603549 603947 - DUF1043_domain-containing_protein C9E48_03165 QCM97261 604141 605268 + cell_division_protein_ZapE C9E48_03170 QCM97262 605487 605915 + 50S_ribosomal_protein_L13 C9E48_03175 QCM97263 605931 606323 + 30S_ribosomal_protein_S9 C9E48_03180 QCM97264 606241 606462 - hypothetical_protein C9E48_03185 QCN01819 606436 606615 + hypothetical_protein C9E48_03190 QCN01818 606567 606776 - hypothetical_protein C9E48_03195 QCM97265 606718 607356 + stringent_starvation_protein_A C9E48_03200 QCM97266 607362 607859 + stringent_starvation_protein_B C9E48_03205 QCM97267 607894 609258 - C4-dicarboxylate_transporter_DcuC C9E48_03210 C9E48_03215 609258 609368 + transposase no_locus_tag QCM97268 609638 610429 + transcriptional_regulator_NanR nanR QCM97269 610551 611444 + N-acetylneuraminate_lyase nanA QCM97270 611553 613043 + MFS_transporter C9E48_03230 QCM97271 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E48_03235 QCM97272 613777 614652 + N-acetylmannosamine_kinase C9E48_03240 QCM97273 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E48_03245 QCM97274 615173 616300 - DUF1016_domain-containing_protein C9E48_03250 QCM97275 616484 617902 - glutamate_synthase_small_subunit C9E48_03255 QCM97276 617915 622375 - glutamate_synthase_large_subunit C9E48_03260 C9E48_03265 622298 622524 + hypothetical_protein no_locus_tag QCM97277 622422 622658 + hypothetical_protein C9E48_03270 QCN01820 623049 623978 + TIGR01212_family_radical_SAM_protein C9E48_03275 QCM97278 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E48_03280 QCM97279 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E48_03285 QCM97280 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E48_03290 QCM97281 628015 628647 - PhoP_regulatory_network_protein_YrbL C9E48_03295 QCM97282 628861 629133 - phosphocarrier_protein_NPr C9E48_03300 QCM97283 629130 629984 - RNase_adaptor_protein_RapZ C9E48_03305 QCM97284 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E48_03310 QCM97285 630639 630926 - ribosome_hibernation_promoting_factor C9E48_03315 QCM97286 630949 632382 - RNA_polymerase_sigma-54_factor C9E48_03320 QCM97287 632430 633155 - ABC_transporter_ATP-binding_protein C9E48_03325 QCM97288 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E48_03330 QCM97289 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC C9E48_03335 QCM97290 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM97291 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E48_03345 QCM97292 635847 636824 - calcium/sodium_antiporter C9E48_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM97274 93 709 107.449856734 0.0 PJR32595.1 QCM97273 100 318 100.0 6e-109 PJR32596.1 QCM97272 100 570 100.0 0.0 PJR32597.1 QCM97271 100 461 100.0 2e-162 PJR32598.1 QCM97270 100 993 100.0 0.0 PJR32599.1 QCM97269 100 611 100.0 0.0 PJR32600.1 QCM97268 100 537 100.0 0.0 >> 39. CP028659_0 Source: Escherichia coli strain 120 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QCM91764 592112 593557 + metalloprotease_TldD C9E49_03110 QCM91765 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E49_03115 QCM91766 594803 595006 + protein_AaeX C9E49_03120 QCM91767 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E49_03125 QCM91768 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E49_03130 QCM91769 598008 598280 + hypothetical_protein C9E49_03135 QCM91770 598336 598599 - DUF1471_domain-containing_protein C9E49_03140 QCM91771 598964 599434 - arginine_repressor C9E49_03145 QCM91772 599869 600807 + malate_dehydrogenase C9E49_03150 QCM91773 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E49_03155 QCM91774 602028 603395 - serine_endoprotease_DegQ C9E49_03160 QCM91775 603549 603947 - hypothetical_protein C9E49_03165 QCM91776 604141 605268 + cell_division_protein_ZapE C9E49_03170 QCM91777 605487 605915 + 50S_ribosomal_protein_L13 C9E49_03175 QCM91778 605931 606323 + 30S_ribosomal_protein_S9 C9E49_03180 QCM91779 606241 606462 - hypothetical_protein C9E49_03185 QCM96339 606436 606615 + hypothetical_protein C9E49_03190 QCM96338 606567 606776 - hypothetical_protein C9E49_03195 QCM91780 606718 607356 + stringent_starvation_protein_A C9E49_03200 QCM91781 607362 607859 + stringent_starvation_protein_B C9E49_03205 QCM91782 607894 609258 - C4-dicarboxylate_ABC_transporter C9E49_03210 C9E49_03215 609258 609368 + transposase no_locus_tag QCM91783 609638 610429 + transcriptional_regulator_NanR nanR QCM91784 610551 611444 + N-acetylneuraminate_lyase nanA QCM91785 611553 613043 + MFS_transporter C9E49_03230 QCM91786 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E49_03235 QCM91787 613777 614652 + N-acetylmannosamine_kinase C9E49_03240 QCM91788 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E49_03245 QCM91789 615173 616300 - DUF1016_domain-containing_protein C9E49_03250 QCM91790 616484 617902 - glutamate_synthase_small_subunit C9E49_03255 QCM91791 617915 622375 - glutamate_synthase_large_subunit C9E49_03260 C9E49_03265 622298 622524 + hypothetical_protein no_locus_tag QCM91792 622422 622658 + hypothetical_protein C9E49_03270 QCM96340 623049 623978 + TIGR01212_family_radical_SAM_protein C9E49_03275 QCM91793 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E49_03280 QCM91794 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E49_03285 QCM91795 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E49_03290 QCM91796 628015 628647 - protein_YrbL yrbL QCM91797 628861 629133 - phosphocarrier_protein_NPr C9E49_03300 QCM91798 629130 629984 - RNase_adaptor_protein_RapZ C9E49_03305 QCM91799 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E49_03310 QCM91800 630639 630926 - ribosome_hibernation_promoting_factor C9E49_03315 QCM91801 630949 632382 - RNA_polymerase_sigma-54_factor C9E49_03320 QCM91802 632430 633155 - ABC_transporter_ATP-binding_protein C9E49_03325 QCM91803 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E49_03330 QCM91804 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCM91805 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM91806 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E49_03345 QCM91807 635847 636824 - calcium/sodium_antiporter C9E49_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM91789 93 709 107.449856734 0.0 PJR32595.1 QCM91788 100 318 100.0 6e-109 PJR32596.1 QCM91787 100 570 100.0 0.0 PJR32597.1 QCM91786 100 461 100.0 2e-162 PJR32598.1 QCM91785 100 993 100.0 0.0 PJR32599.1 QCM91784 100 611 100.0 0.0 PJR32600.1 QCM91783 100 537 100.0 0.0 >> 40. CP028656_0 Source: Escherichia coli strain 121 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QCM86271 592112 593557 + metalloprotease_TldD C9E50_03105 QCM86272 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E50_03110 QCM86273 594803 595006 + protein_AaeX C9E50_03115 QCM86274 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E50_03120 QCM86275 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E50_03125 QCM86276 598008 598280 + hypothetical_protein C9E50_03130 QCM86277 598336 598599 - DUF1471_domain-containing_protein C9E50_03135 QCM86278 598964 599434 - arginine_repressor C9E50_03140 QCM86279 599869 600807 + malate_dehydrogenase C9E50_03145 QCM86280 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E50_03150 QCM86281 602028 603395 - serine_endoprotease_DegQ C9E50_03155 QCM86282 603549 603947 - hypothetical_protein C9E50_03160 QCM86283 604141 605268 + cell_division_protein_ZapE C9E50_03165 QCM86284 605487 605915 + 50S_ribosomal_protein_L13 C9E50_03170 QCM86285 605931 606323 + 30S_ribosomal_protein_S9 C9E50_03175 QCM86286 606241 606462 - hypothetical_protein C9E50_03180 QCM90845 606436 606615 + hypothetical_protein C9E50_03185 QCM90844 606567 606776 - hypothetical_protein C9E50_03190 QCM86287 606718 607356 + stringent_starvation_protein_A C9E50_03195 QCM86288 607362 607859 + stringent_starvation_protein_B C9E50_03200 QCM86289 607894 609258 - C4-dicarboxylate_ABC_transporter C9E50_03205 C9E50_03210 609258 609368 + transposase no_locus_tag QCM86290 609638 610429 + transcriptional_regulator_NanR nanR QCM86291 610551 611444 + N-acetylneuraminate_lyase nanA QCM86292 611553 613043 + MFS_transporter C9E50_03225 QCM86293 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E50_03230 QCM86294 613777 614652 + N-acetylmannosamine_kinase C9E50_03235 QCM86295 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E50_03240 QCM86296 615173 616300 - DUF1016_domain-containing_protein C9E50_03245 QCM86297 616484 617902 - glutamate_synthase_small_subunit C9E50_03250 QCM86298 617915 622375 - glutamate_synthase_large_subunit C9E50_03255 C9E50_03260 622298 622524 + hypothetical_protein no_locus_tag QCM86299 622422 622658 + hypothetical_protein C9E50_03265 QCM90846 623049 623978 + TIGR01212_family_radical_SAM_protein C9E50_03270 QCM86300 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E50_03275 QCM86301 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E50_03280 QCM86302 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E50_03285 QCM86303 628015 628647 - protein_YrbL yrbL QCM86304 628861 629133 - phosphocarrier_protein_NPr C9E50_03295 QCM86305 629130 629984 - RNase_adaptor_protein_RapZ C9E50_03300 QCM86306 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E50_03305 QCM86307 630639 630926 - ribosome_hibernation_promoting_factor C9E50_03310 QCM86308 630949 632382 - RNA_polymerase_sigma-54_factor C9E50_03315 QCM86309 632430 633155 - ABC_transporter_ATP-binding_protein C9E50_03320 QCM86310 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E50_03325 QCM86311 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCM86312 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM86313 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E50_03340 QCM86314 635847 636824 - calcium/sodium_antiporter C9E50_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM86296 93 709 107.449856734 0.0 PJR32595.1 QCM86295 100 318 100.0 6e-109 PJR32596.1 QCM86294 100 570 100.0 0.0 PJR32597.1 QCM86293 100 461 100.0 2e-162 PJR32598.1 QCM86292 100 993 100.0 0.0 PJR32599.1 QCM86291 100 611 100.0 0.0 PJR32600.1 QCM86290 100 537 100.0 0.0 >> 41. CP028647_0 Source: Escherichia coli strain 130 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QCM64351 592112 593557 + metalloprotease_TldD C9E54_03105 QCM64352 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E54_03110 QCM64353 594803 595006 + protein_AaeX C9E54_03115 QCM64354 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E54_03120 QCM64355 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E54_03125 QCM64356 598008 598280 + hypothetical_protein C9E54_03130 QCM64357 598336 598599 - DUF1471_domain-containing_protein C9E54_03135 QCM64358 598964 599434 - arginine_repressor C9E54_03140 QCM64359 599869 600807 + malate_dehydrogenase C9E54_03145 QCM64360 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E54_03150 QCM64361 602028 603395 - serine_endoprotease_DegQ C9E54_03155 QCM64362 603549 603947 - hypothetical_protein C9E54_03160 QCM64363 604141 605268 + cell_division_protein_ZapE C9E54_03165 QCM64364 605487 605915 + 50S_ribosomal_protein_L13 C9E54_03170 QCM64365 605931 606323 + 30S_ribosomal_protein_S9 C9E54_03175 QCM64366 606241 606462 - hypothetical_protein C9E54_03180 QCM68928 606436 606615 + hypothetical_protein C9E54_03185 QCM68927 606567 606776 - hypothetical_protein C9E54_03190 QCM64367 606718 607356 + stringent_starvation_protein_A C9E54_03195 QCM64368 607362 607859 + stringent_starvation_protein_B C9E54_03200 QCM64369 607894 609258 - C4-dicarboxylate_ABC_transporter C9E54_03205 C9E54_03210 609258 609368 + transposase no_locus_tag QCM64370 609638 610429 + transcriptional_regulator_NanR nanR QCM64371 610551 611444 + N-acetylneuraminate_lyase nanA QCM64372 611553 613043 + MFS_transporter C9E54_03225 QCM64373 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E54_03230 QCM64374 613777 614652 + N-acetylmannosamine_kinase C9E54_03235 QCM64375 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E54_03240 QCM64376 615173 616300 - DUF1016_domain-containing_protein C9E54_03245 QCM64377 616484 617902 - glutamate_synthase_small_subunit C9E54_03250 QCM64378 617915 622375 - glutamate_synthase_large_subunit C9E54_03255 C9E54_03260 622298 622524 + hypothetical_protein no_locus_tag QCM64379 622422 622658 + hypothetical_protein C9E54_03265 QCM68929 623049 623978 + TIGR01212_family_radical_SAM_protein C9E54_03270 QCM64380 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E54_03275 QCM64381 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E54_03280 QCM64382 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E54_03285 QCM64383 628015 628647 - protein_YrbL yrbL QCM64384 628861 629133 - phosphocarrier_protein_NPr C9E54_03295 QCM64385 629130 629984 - RNase_adaptor_protein_RapZ C9E54_03300 QCM64386 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E54_03305 QCM64387 630639 630926 - ribosome_hibernation_promoting_factor C9E54_03310 QCM64388 630949 632382 - RNA_polymerase_sigma-54_factor C9E54_03315 QCM64389 632430 633155 - ABC_transporter_ATP-binding_protein C9E54_03320 QCM64390 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E54_03325 QCM64391 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCM64392 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM64393 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E54_03340 QCM64394 635847 636824 - calcium/sodium_antiporter C9E54_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM64376 93 709 107.449856734 0.0 PJR32595.1 QCM64375 100 318 100.0 6e-109 PJR32596.1 QCM64374 100 570 100.0 0.0 PJR32597.1 QCM64373 100 461 100.0 2e-162 PJR32598.1 QCM64372 100 993 100.0 0.0 PJR32599.1 QCM64371 100 611 100.0 0.0 PJR32600.1 QCM64370 100 537 100.0 0.0 >> 42. CP028644_0 Source: Escherichia coli strain 131 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QCM58863 592112 593557 + metalloprotease_TldD C9E55_03105 QCM58864 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E55_03110 QCM58865 594803 595006 + protein_AaeX C9E55_03115 QCM58866 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E55_03120 QCM58867 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E55_03125 QCM58868 598008 598280 + hypothetical_protein C9E55_03130 QCM58869 598336 598599 - DUF1471_domain-containing_protein C9E55_03135 QCM58870 598964 599434 - arginine_repressor C9E55_03140 QCM58871 599869 600807 + malate_dehydrogenase C9E55_03145 QCM58872 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E55_03150 QCM58873 602028 603395 - serine_endoprotease_DegQ C9E55_03155 QCM58874 603549 603947 - hypothetical_protein C9E55_03160 QCM58875 604141 605268 + cell_division_protein_ZapE C9E55_03165 QCM58876 605487 605915 + 50S_ribosomal_protein_L13 C9E55_03170 QCM58877 605931 606323 + 30S_ribosomal_protein_S9 C9E55_03175 QCM58878 606241 606462 - hypothetical_protein C9E55_03180 QCM63439 606436 606615 + hypothetical_protein C9E55_03185 QCM63438 606567 606776 - hypothetical_protein C9E55_03190 QCM58879 606718 607356 + stringent_starvation_protein_A C9E55_03195 QCM58880 607362 607859 + stringent_starvation_protein_B C9E55_03200 QCM58881 607894 609258 - C4-dicarboxylate_ABC_transporter C9E55_03205 C9E55_03210 609258 609368 + transposase no_locus_tag QCM58882 609638 610429 + transcriptional_regulator_NanR nanR QCM58883 610551 611444 + N-acetylneuraminate_lyase nanA QCM58884 611553 613043 + MFS_transporter C9E55_03225 QCM58885 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E55_03230 QCM58886 613777 614652 + N-acetylmannosamine_kinase C9E55_03235 QCM58887 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E55_03240 QCM58888 615173 616300 - DUF1016_domain-containing_protein C9E55_03245 QCM58889 616484 617902 - glutamate_synthase_small_subunit C9E55_03250 QCM58890 617915 622375 - glutamate_synthase_large_subunit C9E55_03255 C9E55_03260 622298 622524 + hypothetical_protein no_locus_tag QCM58891 622422 622658 + hypothetical_protein C9E55_03265 QCM63440 623049 623978 + TIGR01212_family_radical_SAM_protein C9E55_03270 QCM58892 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E55_03275 QCM58893 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E55_03280 QCM58894 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E55_03285 QCM58895 628015 628647 - protein_YrbL yrbL QCM58896 628861 629133 - phosphocarrier_protein_NPr C9E55_03295 QCM58897 629130 629984 - RNase_adaptor_protein_RapZ C9E55_03300 QCM58898 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E55_03305 QCM58899 630639 630926 - ribosome_hibernation_promoting_factor C9E55_03310 QCM58900 630949 632382 - RNA_polymerase_sigma-54_factor C9E55_03315 QCM58901 632430 633155 - ABC_transporter_ATP-binding_protein C9E55_03320 QCM58902 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E55_03325 QCM58903 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCM58904 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM58905 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E55_03340 QCM58906 635847 636824 - calcium/sodium_antiporter C9E55_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM58888 93 709 107.449856734 0.0 PJR32595.1 QCM58887 100 318 100.0 6e-109 PJR32596.1 QCM58886 100 570 100.0 0.0 PJR32597.1 QCM58885 100 461 100.0 2e-162 PJR32598.1 QCM58884 100 993 100.0 0.0 PJR32599.1 QCM58883 100 611 100.0 0.0 PJR32600.1 QCM58882 100 537 100.0 0.0 >> 43. CP028641_0 Source: Escherichia coli strain 132 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QCM53376 592112 593557 + metalloprotease_TldD C9E56_03105 QCM53377 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E56_03110 QCM53378 594803 595006 + protein_AaeX C9E56_03115 QCM53379 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E56_03120 QCM53380 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E56_03125 QCM53381 598008 598280 + hypothetical_protein C9E56_03130 QCM53382 598336 598599 - DUF1471_domain-containing_protein C9E56_03135 QCM53383 598964 599434 - arginine_repressor C9E56_03140 QCM53384 599869 600807 + malate_dehydrogenase C9E56_03145 QCM53385 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E56_03150 QCM53386 602028 603395 - serine_endoprotease_DegQ C9E56_03155 QCM53387 603549 603947 - hypothetical_protein C9E56_03160 QCM53388 604141 605268 + cell_division_protein_ZapE C9E56_03165 QCM53389 605487 605915 + 50S_ribosomal_protein_L13 C9E56_03170 QCM53390 605931 606323 + 30S_ribosomal_protein_S9 C9E56_03175 QCM53391 606241 606462 - hypothetical_protein C9E56_03180 QCM57951 606436 606615 + hypothetical_protein C9E56_03185 QCM57950 606567 606776 - hypothetical_protein C9E56_03190 QCM53392 606718 607356 + stringent_starvation_protein_A C9E56_03195 QCM53393 607362 607859 + stringent_starvation_protein_B C9E56_03200 QCM53394 607894 609258 - C4-dicarboxylate_ABC_transporter C9E56_03205 C9E56_03210 609258 609368 + transposase no_locus_tag QCM53395 609638 610429 + transcriptional_regulator_NanR nanR QCM53396 610551 611444 + N-acetylneuraminate_lyase nanA QCM53397 611553 613043 + MFS_transporter C9E56_03225 QCM53398 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E56_03230 QCM53399 613777 614652 + N-acetylmannosamine_kinase C9E56_03235 QCM53400 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E56_03240 QCM53401 615173 616300 - DUF1016_domain-containing_protein C9E56_03245 QCM53402 616484 617902 - glutamate_synthase_small_subunit C9E56_03250 QCM53403 617915 622375 - glutamate_synthase_large_subunit C9E56_03255 C9E56_03260 622298 622524 + hypothetical_protein no_locus_tag QCM53404 622422 622658 + hypothetical_protein C9E56_03265 QCM57952 623049 623978 + TIGR01212_family_radical_SAM_protein C9E56_03270 QCM53405 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E56_03275 QCM53406 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E56_03280 QCM53407 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E56_03285 QCM53408 628015 628647 - protein_YrbL yrbL QCM53409 628861 629133 - phosphocarrier_protein_NPr C9E56_03295 QCM53410 629130 629984 - RNase_adaptor_protein_RapZ C9E56_03300 QCM53411 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E56_03305 QCM53412 630639 630926 - ribosome_hibernation_promoting_factor C9E56_03310 QCM53413 630949 632382 - RNA_polymerase_sigma-54_factor C9E56_03315 QCM53414 632430 633155 - ABC_transporter_ATP-binding_protein C9E56_03320 QCM53415 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E56_03325 QCM53416 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCM53417 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM53418 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E56_03340 QCM53419 635847 636824 - calcium/sodium_antiporter C9E56_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM53401 93 709 107.449856734 0.0 PJR32595.1 QCM53400 100 318 100.0 6e-109 PJR32596.1 QCM53399 100 570 100.0 0.0 PJR32597.1 QCM53398 100 461 100.0 2e-162 PJR32598.1 QCM53397 100 993 100.0 0.0 PJR32599.1 QCM53396 100 611 100.0 0.0 PJR32600.1 QCM53395 100 537 100.0 0.0 >> 44. CP028638_0 Source: Escherichia coli strain 133 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QCM47893 592112 593557 + metalloprotease_TldD C9E57_03110 QCM47894 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E57_03115 QCM47895 594803 595006 + protein_AaeX C9E57_03120 QCM47896 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E57_03125 QCM47897 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E57_03130 QCM47898 598008 598280 + hypothetical_protein C9E57_03135 QCM47899 598336 598599 - DUF1471_domain-containing_protein C9E57_03140 QCM47900 598964 599434 - arginine_repressor C9E57_03145 QCM47901 599869 600807 + malate_dehydrogenase C9E57_03150 QCM47902 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E57_03155 QCM47903 602028 603395 - serine_endoprotease_DegQ C9E57_03160 QCM47904 603549 603947 - hypothetical_protein C9E57_03165 QCM47905 604141 605268 + cell_division_protein_ZapE C9E57_03170 QCM47906 605487 605915 + 50S_ribosomal_protein_L13 C9E57_03175 QCM47907 605931 606323 + 30S_ribosomal_protein_S9 C9E57_03180 QCM47908 606241 606462 - hypothetical_protein C9E57_03185 QCM52465 606436 606615 + hypothetical_protein C9E57_03190 QCM52464 606567 606776 - hypothetical_protein C9E57_03195 QCM47909 606718 607356 + stringent_starvation_protein_A C9E57_03200 QCM47910 607362 607859 + stringent_starvation_protein_B C9E57_03205 QCM47911 607894 609258 - C4-dicarboxylate_ABC_transporter C9E57_03210 C9E57_03215 609258 609368 + transposase no_locus_tag QCM47912 609638 610429 + transcriptional_regulator_NanR nanR QCM47913 610551 611444 + N-acetylneuraminate_lyase nanA QCM47914 611553 613043 + MFS_transporter C9E57_03230 QCM47915 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E57_03235 QCM47916 613777 614652 + N-acetylmannosamine_kinase C9E57_03240 QCM47917 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E57_03245 QCM47918 615173 616300 - DUF1016_domain-containing_protein C9E57_03250 QCM47919 616484 617902 - glutamate_synthase_small_subunit C9E57_03255 QCM47920 617915 622375 - glutamate_synthase_large_subunit C9E57_03260 C9E57_03265 622298 622524 + hypothetical_protein no_locus_tag QCM47921 622422 622658 + hypothetical_protein C9E57_03270 QCM52466 623049 623978 + TIGR01212_family_radical_SAM_protein C9E57_03275 QCM47922 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E57_03280 QCM47923 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E57_03285 QCM47924 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E57_03290 QCM47925 628015 628647 - protein_YrbL yrbL QCM47926 628861 629133 - phosphocarrier_protein_NPr C9E57_03300 QCM47927 629130 629984 - RNase_adaptor_protein_RapZ C9E57_03305 QCM47928 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E57_03310 QCM47929 630639 630926 - ribosome_hibernation_promoting_factor C9E57_03315 QCM47930 630949 632382 - RNA_polymerase_sigma-54_factor C9E57_03320 QCM47931 632430 633155 - ABC_transporter_ATP-binding_protein C9E57_03325 QCM47932 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E57_03330 QCM47933 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCM47934 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM47935 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E57_03345 QCM47936 635847 636824 - calcium/sodium_antiporter C9E57_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM47918 93 709 107.449856734 0.0 PJR32595.1 QCM47917 100 318 100.0 6e-109 PJR32596.1 QCM47916 100 570 100.0 0.0 PJR32597.1 QCM47915 100 461 100.0 2e-162 PJR32598.1 QCM47914 100 993 100.0 0.0 PJR32599.1 QCM47913 100 611 100.0 0.0 PJR32600.1 QCM47912 100 537 100.0 0.0 >> 45. CP028635_0 Source: Escherichia coli strain 134 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QCM42405 592111 593556 + metalloprotease_TldD C9E58_03105 QCM42406 593690 594619 - HTH-type_transcriptional_activator_AaeR C9E58_03110 QCM42407 594802 595005 + protein_AaeX C9E58_03115 QCM42408 595013 595942 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E58_03120 QCM42409 595948 597915 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E58_03125 QCM42410 598007 598279 + hypothetical_protein C9E58_03130 QCM42411 598335 598598 - DUF1471_domain-containing_protein C9E58_03135 QCM42412 598963 599433 - arginine_repressor C9E58_03140 QCM42413 599868 600806 + malate_dehydrogenase C9E58_03145 QCM42414 600870 601937 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E58_03150 QCM42415 602027 603394 - serine_endoprotease_DegQ C9E58_03155 QCM42416 603548 603946 - hypothetical_protein C9E58_03160 QCM42417 604140 605267 + cell_division_protein_ZapE C9E58_03165 QCM42418 605486 605914 + 50S_ribosomal_protein_L13 C9E58_03170 QCM42419 605930 606322 + 30S_ribosomal_protein_S9 C9E58_03175 QCM42420 606240 606461 - hypothetical_protein C9E58_03180 QCM46974 606435 606614 + hypothetical_protein C9E58_03185 QCM46973 606566 606775 - hypothetical_protein C9E58_03190 QCM42421 606717 607355 + stringent_starvation_protein_A C9E58_03195 QCM42422 607361 607858 + stringent_starvation_protein_B C9E58_03200 QCM42423 607893 609257 - C4-dicarboxylate_ABC_transporter C9E58_03205 C9E58_03210 609257 609367 + transposase no_locus_tag QCM42424 609637 610428 + transcriptional_regulator_NanR nanR QCM42425 610550 611443 + N-acetylneuraminate_lyase nanA QCM42426 611552 613042 + MFS_transporter C9E58_03225 QCM42427 613090 613779 + N-acetylmannosamine-6-phosphate_2-epimerase C9E58_03230 QCM42428 613776 614651 + N-acetylmannosamine_kinase C9E58_03235 QCM42429 614648 615112 + YhcH/YjgK/YiaL_family_protein C9E58_03240 QCM42430 615172 616299 - DUF1016_domain-containing_protein C9E58_03245 QCM42431 616483 617901 - glutamate_synthase_small_subunit C9E58_03250 QCM42432 617914 622374 - glutamate_synthase_large_subunit C9E58_03255 C9E58_03260 622297 622523 + hypothetical_protein no_locus_tag QCM42433 622421 622657 + hypothetical_protein C9E58_03265 QCM46975 623048 623977 + TIGR01212_family_radical_SAM_protein C9E58_03270 QCM42434 624073 626409 + hybrid_sensor_histidine_kinase/response regulator C9E58_03275 QCM42435 626639 627292 + isoprenoid_biosynthesis_protein_ElbB C9E58_03280 QCM42436 627289 628017 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E58_03285 QCM42437 628014 628646 - protein_YrbL yrbL QCM42438 628860 629132 - phosphocarrier_protein_NPr C9E58_03295 QCM42439 629129 629983 - RNase_adaptor_protein_RapZ C9E58_03300 QCM42440 630029 630520 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E58_03305 QCM42441 630638 630925 - ribosome_hibernation_promoting_factor C9E58_03310 QCM42442 630948 632381 - RNA_polymerase_sigma-54_factor C9E58_03315 QCM42443 632429 633154 - ABC_transporter_ATP-binding_protein C9E58_03320 QCM42444 633161 633718 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E58_03325 QCM42445 633687 634262 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCM42446 634259 634825 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM42447 634846 635832 - arabinose_5-phosphate_isomerase_KdsD C9E58_03340 QCM42448 635846 636823 - calcium/sodium_antiporter C9E58_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM42430 93 709 107.449856734 0.0 PJR32595.1 QCM42429 100 318 100.0 6e-109 PJR32596.1 QCM42428 100 570 100.0 0.0 PJR32597.1 QCM42427 100 461 100.0 2e-162 PJR32598.1 QCM42426 100 993 100.0 0.0 PJR32599.1 QCM42425 100 611 100.0 0.0 PJR32600.1 QCM42424 100 537 100.0 0.0 >> 46. CP028632_0 Source: Escherichia coli strain 135 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: QCM36917 592112 593557 + metalloprotease_TldD C9E59_03105 QCM36918 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E59_03110 QCM36919 594803 595006 + protein_AaeX C9E59_03115 QCM36920 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E59_03120 QCM36921 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E59_03125 QCM36922 598008 598280 + hypothetical_protein C9E59_03130 QCM36923 598336 598599 - DUF1471_domain-containing_protein C9E59_03135 QCM36924 598964 599434 - arginine_repressor C9E59_03140 QCM36925 599869 600807 + malate_dehydrogenase C9E59_03145 QCM36926 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E59_03150 QCM36927 602028 603395 - serine_endoprotease_DegQ C9E59_03155 QCM36928 603549 603947 - hypothetical_protein C9E59_03160 QCM36929 604141 605268 + cell_division_protein_ZapE C9E59_03165 QCM36930 605487 605915 + 50S_ribosomal_protein_L13 C9E59_03170 QCM36931 605931 606323 + 30S_ribosomal_protein_S9 C9E59_03175 QCM36932 606241 606462 - hypothetical_protein C9E59_03180 QCM41493 606436 606615 + hypothetical_protein C9E59_03185 QCM41492 606567 606776 - hypothetical_protein C9E59_03190 QCM36933 606718 607356 + stringent_starvation_protein_A C9E59_03195 QCM36934 607362 607859 + stringent_starvation_protein_B C9E59_03200 QCM36935 607894 609258 - C4-dicarboxylate_ABC_transporter C9E59_03205 C9E59_03210 609258 609368 + transposase no_locus_tag QCM36936 609638 610429 + transcriptional_regulator_NanR nanR QCM36937 610551 611444 + N-acetylneuraminate_lyase nanA QCM36938 611553 613043 + MFS_transporter C9E59_03225 QCM36939 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E59_03230 QCM36940 613777 614652 + N-acetylmannosamine_kinase C9E59_03235 QCM36941 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E59_03240 QCM36942 615173 616300 - DUF1016_domain-containing_protein C9E59_03245 QCM36943 616484 617902 - glutamate_synthase_small_subunit C9E59_03250 QCM36944 617915 622375 - glutamate_synthase_large_subunit C9E59_03255 C9E59_03260 622298 622524 + hypothetical_protein no_locus_tag QCM36945 622422 622658 + hypothetical_protein C9E59_03265 QCM41494 623049 623978 + TIGR01212_family_radical_SAM_protein C9E59_03270 QCM36946 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E59_03275 QCM36947 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E59_03280 QCM36948 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E59_03285 QCM36949 628015 628647 - protein_YrbL yrbL QCM36950 628861 629133 - phosphocarrier_protein_NPr C9E59_03295 QCM36951 629130 629984 - RNase_adaptor_protein_RapZ C9E59_03300 QCM36952 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E59_03305 QCM36953 630639 630926 - ribosome_hibernation_promoting_factor C9E59_03310 QCM36954 630949 632382 - RNA_polymerase_sigma-54_factor C9E59_03315 QCM36955 632430 633155 - ABC_transporter_ATP-binding_protein C9E59_03320 QCM36956 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E59_03325 QCM36957 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCM36958 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM36959 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E59_03340 QCM36960 635847 636824 - calcium/sodium_antiporter C9E59_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM36942 93 709 107.449856734 0.0 PJR32595.1 QCM36941 100 318 100.0 6e-109 PJR32596.1 QCM36940 100 570 100.0 0.0 PJR32597.1 QCM36939 100 461 100.0 2e-162 PJR32598.1 QCM36938 100 993 100.0 0.0 PJR32599.1 QCM36937 100 611 100.0 0.0 PJR32600.1 QCM36936 100 537 100.0 0.0 >> 47. CP017446_0 Source: Escherichia coli O157:H7 strain 9234 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: AOV52098 592191 593636 + metalloprotease_TldD A4C47_03010 AOV52099 593770 594699 - transcriptional_regulator A4C47_03015 AOV56575 594882 595085 + transporter A4C47_03020 AOV52100 595093 596022 + efflux_transporter_periplasmic_adaptor_subunit A4C47_03025 AOV52101 596028 597995 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB A4C47_03030 AOV52102 598087 598359 + hypothetical_protein A4C47_03035 AOV52103 598415 598678 - hypothetical_protein A4C47_03040 AOV52104 599043 599513 - arginine_repressor A4C47_03045 AOV52105 599948 600886 + malate_dehydrogenase A4C47_03050 AOV52106 600950 602017 - outer_membrane-stress_sensor_serine endopeptidase DegS A4C47_03055 AOV52107 602107 603474 - serine_endoprotease_DegQ A4C47_03060 AOV52108 603628 604026 - hypothetical_protein A4C47_03065 AOV52109 604220 605347 + cell_division_protein_ZapE A4C47_03070 AOV52110 605566 605994 + 50S_ribosomal_protein_L13 A4C47_03075 AOV52111 606010 606402 + 30S_ribosomal_protein_S9 A4C47_03080 AOV52112 606797 607435 + stringent_starvation_protein_A sspA AOV52113 607441 607938 + ClpXP_protease_specificity-enhancing_factor A4C47_03090 AOV52114 607973 609337 - C4-dicarboxylate_ABC_transporter A4C47_03095 AOV52115 609717 610508 + transcriptional_regulator_NanR A4C47_03100 AOV52116 610630 611523 + N-acetylneuraminate_lyase A4C47_03105 AOV52117 611632 613122 + sialic_acid_transporter A4C47_03110 AOV52118 613170 613859 + N-acetylmannosamine-6-phosphate_2-epimerase A4C47_03115 AOV52119 613856 614731 + N-acetylmannosamine_kinase A4C47_03120 AOV52120 614728 615192 + hypothetical_protein A4C47_03125 AOV52121 615252 616379 - hypothetical_protein A4C47_03130 AOV52122 616563 617981 - glutamate_synthase A4C47_03135 AOV56576 617994 622454 - glutamate_synthase_large_subunit A4C47_03140 AOV56577 623128 624057 + TIGR01212_family_radical_SAM_protein A4C47_03145 AOV52123 624153 626489 + aerobic_respiration_two-component_sensor histidine kinase ArcB A4C47_03150 AOV52124 626719 627372 + isoprenoid_biosynthesis_protein_ElbB A4C47_03155 AOV52125 627369 628097 + monofunctional_biosynthetic_peptidoglycan transglycosylase A4C47_03160 AOV52126 628094 628726 - hypothetical_protein A4C47_03165 AOV52127 628940 629212 - phosphohistidinoprotein-hexose phosphotransferase A4C47_03170 AOV52128 629209 630063 - RNase_adaptor_protein_RapZ A4C47_03175 AOV52129 630109 630600 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN A4C47_03180 AOV52130 630718 631005 - ribosomal_subunit_interface_protein A4C47_03185 AOV52131 631028 632461 - RNA_polymerase_factor_sigma-54 A4C47_03190 AOV52132 632509 633234 - LPS_export_ABC_transporter_ATP-binding_protein A4C47_03195 AOV52133 633241 633798 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA A4C47_03200 AOV52134 633767 634342 - LPS_export_ABC_transporter_periplasmic_protein LptC A4C47_03205 AOV52135 634339 634905 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase A4C47_03210 AOV52136 634926 635912 - D-arabinose_5-phosphate_isomerase A4C47_03215 AOV52137 635926 636903 - calcium/sodium_antiporter A4C47_03220 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AOV52121 93 709 107.449856734 0.0 PJR32595.1 AOV52120 100 318 100.0 6e-109 PJR32596.1 AOV52119 100 570 100.0 0.0 PJR32597.1 AOV52118 100 461 100.0 2e-162 PJR32598.1 AOV52117 100 993 100.0 0.0 PJR32599.1 AOV52116 100 611 100.0 0.0 PJR32600.1 AOV52115 100 537 100.0 0.0 >> 48. CP017442_0 Source: Escherichia coli O157:H7 strain 4276 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: AOV41338 592191 593636 + metalloprotease_TldD A4C51_03010 AOV41339 593770 594699 - transcriptional_regulator A4C51_03015 AOV45808 594882 595085 + transporter A4C51_03020 AOV41340 595093 596022 + efflux_transporter_periplasmic_adaptor_subunit A4C51_03025 AOV41341 596028 597995 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB A4C51_03030 AOV41342 598087 598359 + hypothetical_protein A4C51_03035 AOV45809 598415 598678 - hypothetical_protein A4C51_03040 AOV41343 599043 599513 - arginine_repressor A4C51_03045 AOV41344 599948 600886 + malate_dehydrogenase A4C51_03050 AOV41345 600950 602017 - outer_membrane-stress_sensor_serine endopeptidase DegS A4C51_03055 AOV41346 602107 603474 - serine_endoprotease_DegQ A4C51_03060 AOV41347 603628 604026 - hypothetical_protein A4C51_03065 AOV41348 604220 605347 + cell_division_protein_ZapE A4C51_03070 AOV41349 605566 605994 + 50S_ribosomal_protein_L13 A4C51_03075 AOV41350 606010 606402 + 30S_ribosomal_protein_S9 A4C51_03080 AOV41351 606797 607435 + stringent_starvation_protein_A sspA AOV41352 607441 607938 + ClpXP_protease_specificity-enhancing_factor A4C51_03090 AOV41353 607973 609337 - C4-dicarboxylate_ABC_transporter A4C51_03095 AOV41354 609717 610508 + transcriptional_regulator_NanR A4C51_03100 AOV41355 610630 611523 + N-acetylneuraminate_lyase A4C51_03105 AOV41356 611632 613122 + sialic_acid_transporter A4C51_03110 AOV41357 613170 613859 + N-acetylmannosamine-6-phosphate_2-epimerase A4C51_03115 AOV41358 613856 614731 + N-acetylmannosamine_kinase A4C51_03120 AOV41359 614728 615192 + hypothetical_protein A4C51_03125 AOV41360 615252 616379 - hypothetical_protein A4C51_03130 AOV41361 616563 617981 - glutamate_synthase A4C51_03135 AOV45810 617994 622454 - glutamate_synthase_large_subunit A4C51_03140 AOV45811 623128 624057 + TIGR01212_family_radical_SAM_protein A4C51_03145 AOV41362 624153 626489 + aerobic_respiration_two-component_sensor histidine kinase ArcB A4C51_03150 AOV41363 626719 627372 + isoprenoid_biosynthesis_protein_ElbB A4C51_03155 AOV41364 627369 628097 + monofunctional_biosynthetic_peptidoglycan transglycosylase A4C51_03160 AOV41365 628094 628726 - hypothetical_protein A4C51_03165 AOV41366 628940 629212 - phosphohistidinoprotein-hexose phosphotransferase A4C51_03170 AOV41367 629209 630063 - RNase_adaptor_protein_RapZ A4C51_03175 AOV41368 630109 630600 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN A4C51_03180 AOV41369 630718 631005 - ribosomal_subunit_interface_protein A4C51_03185 AOV41370 631028 632461 - RNA_polymerase_factor_sigma-54 A4C51_03190 AOV41371 632509 633234 - LPS_export_ABC_transporter_ATP-binding_protein A4C51_03195 AOV41372 633241 633798 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA A4C51_03200 AOV41373 633767 634342 - LPS_export_ABC_transporter_periplasmic_protein LptC A4C51_03205 AOV41374 634339 634905 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase A4C51_03210 AOV41375 634926 635912 - D-arabinose_5-phosphate_isomerase A4C51_03215 AOV41376 635926 636903 - calcium/sodium_antiporter A4C51_03220 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AOV41360 93 709 107.449856734 0.0 PJR32595.1 AOV41359 100 318 100.0 6e-109 PJR32596.1 AOV41358 100 570 100.0 0.0 PJR32597.1 AOV41357 100 461 100.0 2e-162 PJR32598.1 AOV41356 100 993 100.0 0.0 PJR32599.1 AOV41355 100 611 100.0 0.0 PJR32600.1 AOV41354 100 537 100.0 0.0 >> 49. CP017438_0 Source: Escherichia coli O157:H7 strain 2159 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: AOV30558 592180 593625 + metalloprotease_TldD A4C45_03010 AOV30559 593759 594688 - transcriptional_regulator A4C45_03015 AOV35046 594871 595074 + transporter A4C45_03020 AOV30560 595082 596011 + efflux_transporter_periplasmic_adaptor_subunit A4C45_03025 AOV30561 596017 597984 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB A4C45_03030 AOV30562 598076 598348 + hypothetical_protein A4C45_03035 AOV30563 598404 598667 - hypothetical_protein A4C45_03040 AOV30564 599032 599502 - arginine_repressor A4C45_03045 AOV30565 599937 600875 + malate_dehydrogenase A4C45_03050 AOV30566 600939 602006 - outer_membrane-stress_sensor_serine endopeptidase DegS A4C45_03055 AOV30567 602096 603463 - serine_endoprotease_DegQ A4C45_03060 AOV30568 603617 604015 - hypothetical_protein A4C45_03065 AOV30569 604209 605336 + cell_division_protein_ZapE A4C45_03070 AOV30570 605555 605983 + 50S_ribosomal_protein_L13 A4C45_03075 AOV30571 605999 606391 + 30S_ribosomal_protein_S9 A4C45_03080 AOV30572 606786 607424 + stringent_starvation_protein_A sspA AOV30573 607430 607927 + ClpXP_protease_specificity-enhancing_factor A4C45_03090 AOV30574 607962 609326 - C4-dicarboxylate_ABC_transporter A4C45_03095 AOV30575 609706 610497 + transcriptional_regulator_NanR A4C45_03100 AOV30576 610619 611512 + N-acetylneuraminate_lyase A4C45_03105 AOV30577 611621 613111 + sialic_acid_transporter A4C45_03110 AOV30578 613159 613848 + N-acetylmannosamine-6-phosphate_2-epimerase A4C45_03115 AOV30579 613845 614720 + N-acetylmannosamine_kinase A4C45_03120 AOV30580 614717 615181 + hypothetical_protein A4C45_03125 AOV30581 615241 616368 - hypothetical_protein A4C45_03130 AOV30582 616552 617970 - glutamate_synthase A4C45_03135 AOV35047 617983 622443 - glutamate_synthase_large_subunit A4C45_03140 AOV35048 623117 624046 + TIGR01212_family_radical_SAM_protein A4C45_03145 AOV30583 624142 626478 + aerobic_respiration_two-component_sensor histidine kinase ArcB A4C45_03150 AOV30584 626708 627361 + isoprenoid_biosynthesis_protein_ElbB A4C45_03155 AOV30585 627358 628086 + monofunctional_biosynthetic_peptidoglycan transglycosylase A4C45_03160 AOV30586 628083 628715 - hypothetical_protein A4C45_03165 AOV30587 628929 629201 - phosphohistidinoprotein-hexose phosphotransferase A4C45_03170 AOV30588 629198 630052 - RNase_adaptor_protein_RapZ A4C45_03175 AOV30589 630098 630589 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN A4C45_03180 AOV30590 630707 630994 - ribosomal_subunit_interface_protein A4C45_03185 AOV30591 631017 632450 - RNA_polymerase_factor_sigma-54 A4C45_03190 AOV30592 632498 633223 - LPS_export_ABC_transporter_ATP-binding_protein A4C45_03195 AOV30593 633230 633787 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA A4C45_03200 AOV30594 633756 634331 - LPS_export_ABC_transporter_periplasmic_protein LptC A4C45_03205 AOV30595 634328 634894 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase A4C45_03210 AOV30596 634915 635901 - D-arabinose_5-phosphate_isomerase A4C45_03215 AOV30597 635915 636892 - calcium/sodium_antiporter A4C45_03220 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AOV30581 93 709 107.449856734 0.0 PJR32595.1 AOV30580 100 318 100.0 6e-109 PJR32596.1 AOV30579 100 570 100.0 0.0 PJR32597.1 AOV30578 100 461 100.0 2e-162 PJR32598.1 AOV30577 100 993 100.0 0.0 PJR32599.1 AOV30576 100 611 100.0 0.0 PJR32600.1 AOV30575 100 537 100.0 0.0 >> 50. CP017436_0 Source: Escherichia coli O157:H7 strain 2149 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: AOV25207 592180 593625 + metalloprotease_TldD A4C44_03010 AOV25208 593759 594688 - transcriptional_regulator A4C44_03015 AOV29679 594871 595074 + transporter A4C44_03020 AOV25209 595082 596011 + efflux_transporter_periplasmic_adaptor_subunit A4C44_03025 AOV25210 596017 597984 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB A4C44_03030 AOV25211 598076 598348 + hypothetical_protein A4C44_03035 AOV25212 598404 598667 - hypothetical_protein A4C44_03040 AOV25213 599032 599502 - arginine_repressor A4C44_03045 AOV25214 599937 600875 + malate_dehydrogenase A4C44_03050 AOV25215 600939 602006 - outer_membrane-stress_sensor_serine endopeptidase DegS A4C44_03055 AOV25216 602096 603463 - serine_endoprotease_DegQ A4C44_03060 AOV25217 603617 604015 - hypothetical_protein A4C44_03065 AOV25218 604209 605336 + cell_division_protein_ZapE A4C44_03070 AOV25219 605555 605983 + 50S_ribosomal_protein_L13 A4C44_03075 AOV25220 605999 606391 + 30S_ribosomal_protein_S9 A4C44_03080 AOV25221 606786 607424 + stringent_starvation_protein_A sspA AOV25222 607430 607927 + ClpXP_protease_specificity-enhancing_factor A4C44_03090 AOV25223 607962 609326 - C4-dicarboxylate_ABC_transporter A4C44_03095 AOV25224 609706 610497 + transcriptional_regulator_NanR A4C44_03100 AOV25225 610619 611512 + N-acetylneuraminate_lyase A4C44_03105 AOV25226 611621 613111 + sialic_acid_transporter A4C44_03110 AOV25227 613159 613848 + N-acetylmannosamine-6-phosphate_2-epimerase A4C44_03115 AOV25228 613845 614720 + N-acetylmannosamine_kinase A4C44_03120 AOV25229 614717 615181 + hypothetical_protein A4C44_03125 AOV25230 615241 616368 - hypothetical_protein A4C44_03130 AOV25231 616552 617970 - glutamate_synthase A4C44_03135 AOV29680 617983 622443 - glutamate_synthase_large_subunit A4C44_03140 AOV29681 623117 624046 + TIGR01212_family_radical_SAM_protein A4C44_03145 AOV25232 624142 626478 + aerobic_respiration_two-component_sensor histidine kinase ArcB A4C44_03150 AOV25233 626708 627361 + isoprenoid_biosynthesis_protein_ElbB A4C44_03155 AOV25234 627358 628086 + monofunctional_biosynthetic_peptidoglycan transglycosylase A4C44_03160 AOV25235 628083 628715 - hypothetical_protein A4C44_03165 AOV25236 628929 629201 - phosphohistidinoprotein-hexose phosphotransferase A4C44_03170 AOV25237 629198 630052 - RNase_adaptor_protein_RapZ A4C44_03175 AOV25238 630098 630589 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN A4C44_03180 AOV25239 630707 630994 - ribosomal_subunit_interface_protein A4C44_03185 AOV25240 631017 632450 - RNA_polymerase_factor_sigma-54 A4C44_03190 AOV25241 632498 633223 - LPS_export_ABC_transporter_ATP-binding_protein A4C44_03195 AOV25242 633230 633787 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA A4C44_03200 AOV25243 633756 634331 - LPS_export_ABC_transporter_periplasmic_protein LptC A4C44_03205 AOV25244 634328 634894 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase A4C44_03210 AOV25245 634915 635901 - D-arabinose_5-phosphate_isomerase A4C44_03215 AOV25246 635915 636892 - calcium/sodium_antiporter A4C44_03220 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AOV25230 93 709 107.449856734 0.0 PJR32595.1 AOV25229 100 318 100.0 6e-109 PJR32596.1 AOV25228 100 570 100.0 0.0 PJR32597.1 AOV25227 100 461 100.0 2e-162 PJR32598.1 AOV25226 100 993 100.0 0.0 PJR32599.1 AOV25225 100 611 100.0 0.0 PJR32600.1 AOV25224 100 537 100.0 0.0 >> 51. CP017434_0 Source: Escherichia coli O157:H7 strain 1130 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4199 Table of genes, locations, strands and annotations of subject cluster: AOV19852 592189 593634 + metalloprotease_TldD A4C50_03010 AOV19853 593768 594697 - transcriptional_regulator A4C50_03015 AOV24328 594880 595083 + transporter A4C50_03020 AOV19854 595091 596020 + efflux_transporter_periplasmic_adaptor_subunit A4C50_03025 AOV19855 596026 597993 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB A4C50_03030 AOV19856 598085 598357 + hypothetical_protein A4C50_03035 AOV19857 598413 598676 - hypothetical_protein A4C50_03040 AOV19858 599041 599511 - arginine_repressor A4C50_03045 AOV19859 599946 600884 + malate_dehydrogenase A4C50_03050 AOV19860 600948 602015 - outer_membrane-stress_sensor_serine endopeptidase DegS A4C50_03055 AOV19861 602105 603472 - serine_endoprotease_DegQ A4C50_03060 AOV19862 603626 604024 - hypothetical_protein A4C50_03065 AOV19863 604218 605345 + cell_division_protein_ZapE A4C50_03070 AOV19864 605564 605992 + 50S_ribosomal_protein_L13 A4C50_03075 AOV19865 606008 606400 + 30S_ribosomal_protein_S9 A4C50_03080 AOV19866 606795 607433 + stringent_starvation_protein_A sspA AOV19867 607439 607936 + ClpXP_protease_specificity-enhancing_factor A4C50_03090 AOV19868 607971 609335 - C4-dicarboxylate_ABC_transporter A4C50_03095 AOV19869 609715 610506 + transcriptional_regulator_NanR A4C50_03100 AOV19870 610628 611521 + N-acetylneuraminate_lyase A4C50_03105 AOV19871 611630 613120 + sialic_acid_transporter A4C50_03110 AOV19872 613168 613857 + N-acetylmannosamine-6-phosphate_2-epimerase A4C50_03115 AOV19873 613854 614729 + N-acetylmannosamine_kinase A4C50_03120 AOV19874 614726 615190 + hypothetical_protein A4C50_03125 AOV19875 615250 616377 - hypothetical_protein A4C50_03130 AOV19876 616561 617979 - glutamate_synthase A4C50_03135 AOV24329 617992 622452 - glutamate_synthase_large_subunit A4C50_03140 AOV24330 623126 624055 + TIGR01212_family_radical_SAM_protein A4C50_03145 AOV19877 624151 626487 + aerobic_respiration_two-component_sensor histidine kinase ArcB A4C50_03150 AOV19878 626717 627370 + isoprenoid_biosynthesis_protein_ElbB A4C50_03155 AOV19879 627367 628095 + monofunctional_biosynthetic_peptidoglycan transglycosylase A4C50_03160 AOV19880 628092 628724 - hypothetical_protein A4C50_03165 AOV19881 628938 629210 - phosphohistidinoprotein-hexose phosphotransferase A4C50_03170 AOV19882 629207 630061 - RNase_adaptor_protein_RapZ A4C50_03175 AOV19883 630107 630598 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN A4C50_03180 AOV19884 630716 631003 - ribosomal_subunit_interface_protein A4C50_03185 AOV19885 631026 632459 - RNA_polymerase_factor_sigma-54 A4C50_03190 AOV19886 632507 633232 - LPS_export_ABC_transporter_ATP-binding_protein A4C50_03195 AOV19887 633239 633796 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA A4C50_03200 AOV19888 633765 634340 - LPS_export_ABC_transporter_periplasmic_protein LptC A4C50_03205 AOV19889 634337 634903 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase A4C50_03210 AOV19890 634924 635910 - D-arabinose_5-phosphate_isomerase A4C50_03215 AOV19891 635924 636901 - calcium/sodium_antiporter A4C50_03220 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AOV19875 93 709 107.449856734 0.0 PJR32595.1 AOV19874 100 318 100.0 6e-109 PJR32596.1 AOV19873 100 570 100.0 0.0 PJR32597.1 AOV19872 100 461 100.0 2e-162 PJR32598.1 AOV19871 100 993 100.0 0.0 PJR32599.1 AOV19870 100 611 100.0 0.0 PJR32600.1 AOV19869 100 537 100.0 0.0 >> 52. CP015241_0 Source: Escherichia coli strain 2013C-4465 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4197 Table of genes, locations, strands and annotations of subject cluster: ANE64210 1515180 1516166 + D-arabinose_5-phosphate_isomerase A5955_07535 ANE64211 1516187 1516753 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase A5955_07540 ANE64212 1516750 1517325 + LPS_export_ABC_transporter_periplasmic_protein LptC A5955_07545 ANE64213 1517294 1517851 + lipopolysaccharide_transport_periplasmic_protein LptA A5955_07550 ANE64214 1517858 1518583 + ABC_transporter_ATP-binding_protein A5955_07555 ANE64215 1518631 1520064 + RNA_polymerase_factor_sigma-54 A5955_07560 ANE64216 1520087 1520374 + hypothetical_protein A5955_07565 ANE64217 1520492 1520983 + transcriptional_regulator A5955_07570 ANE64218 1521029 1521883 + RNase_adaptor_protein_RapZ A5955_07575 ANE64219 1521880 1522152 + phosphohistidinoprotein-hexose phosphotransferase A5955_07580 ANE64220 1522366 1522998 + hypothetical_protein A5955_07585 ANE64221 1522995 1523723 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA ANE64222 1523720 1524373 - isoprenoid_biosynthesis_protein_ElbB A5955_07595 ANE64223 1524603 1526939 - aerobic_respiration_two-component_sensor histidine kinase ArcB A5955_07600 ANE67833 1527035 1527964 - radical_SAM_protein A5955_07605 ANE67834 1528638 1533098 + glutamate_synthase_large_subunit gltB ANE64224 1533111 1534529 + glutamate_synthase A5955_07615 ANE64225 1534713 1535840 + hypothetical_protein A5955_07620 ANE64226 1535900 1536364 - hypothetical_protein A5955_07625 ANE64227 1536361 1537236 - N-acetylmannosamine_kinase A5955_07630 ANE64228 1537233 1537922 - N-acetylmannosamine-6-phosphate_2-epimerase A5955_07635 ANE64229 1537970 1539460 - sialic_acid_transporter A5955_07640 ANE64230 1539569 1540462 - N-acetylneuraminate_lyase A5955_07645 ANE64231 1540584 1541375 - transcriptional_regulator_NanR A5955_07650 ANE64232 1541755 1543122 + C4-dicarboxylate_transporter A5955_07655 ANE64233 1543165 1543662 - ClpXP_protease_specificity-enhancing_factor A5955_07660 ANE64234 1543668 1544306 - stringent_starvation_protein_A sspA ANE64235 1544701 1545093 - 30S_ribosomal_protein_S9 A5955_07670 ANE64236 1545109 1545537 - 50S_ribosomal_protein_L13 A5955_07675 ANE64237 1545756 1546883 - hypothetical_protein A5955_07680 ANE64238 1547077 1547475 + hypothetical_protein A5955_07685 ANE64239 1547629 1548996 + serine_endoprotease_DegQ A5955_07690 ANE64240 1549086 1550153 + outer_membrane-stress_sensor_serine endopeptidase DegS A5955_07695 ANE64241 1550217 1551155 - malate_dehydrogenase A5955_07700 ANE64242 1551590 1552060 + arginine_repressor A5955_07705 ANE64243 1552427 1552690 + hypothetical_protein A5955_07710 ANE64244 1552746 1553018 - hypothetical_protein A5955_07715 ANE64245 1553110 1555077 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB A5955_07720 ANE64246 1555083 1556015 - efflux_transporter_periplasmic_adaptor_subunit A5955_07725 ANE67835 1556023 1556226 - transporter A5955_07730 ANE64247 1556409 1557338 + transcriptional_regulator A5955_07735 ANE64248 1557466 1558911 - metalloprotease_TldD tldD ANE64249 1559067 1562867 - hypothetical_protein A5955_07745 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ANE64225 93 709 107.449856734 0.0 PJR32595.1 ANE64226 100 318 100.0 6e-109 PJR32596.1 ANE64227 99 568 100.0 0.0 PJR32597.1 ANE64228 100 461 100.0 2e-162 PJR32598.1 ANE64229 100 993 100.0 0.0 PJR32599.1 ANE64230 100 611 100.0 0.0 PJR32600.1 ANE64231 100 537 100.0 0.0 >> 53. CP001846_0 Source: Escherichia coli O55:H7 str. CB9615, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4197 Table of genes, locations, strands and annotations of subject cluster: ADD58405 3972304 3973290 + Arabinose_5-phosphate_isomerase kdsD ADD58406 3973311 3973877 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC ADD58407 3973874 3974449 + hypothetical_protein yrbK ADD58408 3974418 3974975 + Protein_yhbN_precursor lptA ADD58409 3974982 3975707 + Uncharacterized_ABC_transporter_ATP-binding protein yhbG lptB ADD58410 3975755 3977188 + RNA_polymerase_sigma-54_factor rpoN ADD58411 3977211 3977498 + Probable_sigma(54)_modulation_protein hpf ADD58412 3977616 3978107 + PTS_IIA-like_nitrogen-regulatory_protein_PtsN ptsN ADD58413 3978153 3979007 + UPF0042_protein_yhbJ yhbJ ADD58414 3979004 3979276 + Phosphocarrier_protein_NPr npr ADD58415 3979490 3980122 + hypothetical_protein yrbL ADD58416 3980119 3980847 - Monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA ADD58417 3980844 3981506 - Sigma_cross-reacting_protein_27A elbB ADD58418 3981727 3984063 - Aerobic_respiration_control_sensor_protein_arcB arcB ADD58419 3984159 3985088 - hypothetical_protein yhcC ADD58420 3985669 3990222 + Glutamate_synthase_(NADPH),_large_subunit gltB ADD58421 3990235 3991653 + Glutamate_synthase_(NADPH),_small_subunit gltD ADD58422 3991837 3992964 + conserved_hypothetical_protein yhcG ADD58423 3993024 3993488 - hypothetical_protein yhcH ADD58424 3993485 3994360 - N-acetylmannosamine_kinase nanK ADD58425 3994357 3995046 - Putative_N-acetylmannosamine-6-phosphate 2-epimerase nanE ADD58426 3995094 3996584 - Sialic_acid_transporter nanT ADD58427 3996693 3997586 - N-acetylneuraminate_lyase nanA ADD58428 3997708 3998499 - Transcriptional_regulator nanR ADD58429 3998879 4000246 + Putative_C4-dicarboxylate_carrier_protein dcuD ADD58430 4000289 4000786 - Stringent_starvation_protein_B sspB ADD58431 4000792 4001430 - Stringent_starvation_protein_A sspA ADD58432 4001825 4002217 - 30S_ribosomal_protein_S9 rpsI ADD58433 4002233 4002661 - 50S_ribosomal_protein_L13 rplM ADD58434 4002880 4004007 - hypothetical_protein yhcM ADD58435 4004195 4004599 + hypothetical_protein yhcB ADD58436 4004753 4006120 + Serine_peptidase_DegQ degQ ADD58437 4006210 4007277 + Protease_degS_precursor degS ADD58438 4007341 4008345 - Malate_dehydrogenase mdh ADD58439 4008714 4009184 + Arginine_repressor argR ADD58440 4009500 4009814 + hypothetical_protein yhcN ADD58441 4009870 4010142 - hypothetical_protein yhcO ADD58442 4010234 4012201 - p-hydroxybenzoic_acid_efflux_pump_subunit_aaeB aaeB ADD58443 4012207 4013139 - p-hydroxybenzoic_acid_efflux_pump_subunit_aaeA aaeA ADD58444 4013147 4013419 - hypothetical_protein aaeX ADD58445 4013533 4014462 + putative_DNA-binding_transcriptional_regulator aaeR ADD58446 4014590 4016035 - suppresses_inhibitory_activity_of_CsrA tldD ADD58447 4016191 4019991 - hypothetical_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ADD58422 93 709 107.449856734 0.0 PJR32595.1 ADD58423 100 318 100.0 6e-109 PJR32596.1 ADD58424 99 568 100.0 0.0 PJR32597.1 ADD58425 100 461 100.0 2e-162 PJR32598.1 ADD58426 100 993 100.0 0.0 PJR32599.1 ADD58427 100 611 100.0 0.0 PJR32600.1 ADD58428 100 537 100.0 0.0 >> 54. CP019944_0 Source: Escherichia coli strain DSM 103246 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4172 Table of genes, locations, strands and annotations of subject cluster: AQZ75570 529206 530651 + protease_TldD tldD AQZ75571 530779 531708 - DNA-binding_transcriptional_regulator Eco28_00520 AQZ75572 531891 532094 + membrane_protein_of_efflux_system aaeX AQZ75573 532102 533034 + p-hydroxybenzoic_acid_efflux_subunit_AaeA Eco28_00522 AQZ75574 533040 535007 + p-hydroxybenzoic_acid_efflux_subunit_AaeB Eco28_00523 AQZ75575 535099 535371 + barnase_inhibitor yhcO AQZ75576 535427 535690 - protein_YcfR ycfR AQZ75577 536055 536525 - arginine_repressor_ArgR Eco28_00526 AQZ75578 536960 537898 + malate_dehydrogenase mdh AQZ75579 537961 539028 - serine_endoprotease Eco28_00528 AQZ75580 539118 540485 - serine_endoprotease degQ AQZ75581 540639 541037 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB AQZ75582 541231 542358 + ATPase Eco28_00531 AQZ75583 542577 543005 + 50S_ribosomal_protein_L13 rplM AQZ75584 543021 543413 + 30S_ribosomal_protein_S9 rpsI AQZ75585 543808 544446 + stringent_starvation_protein_A sspA AQZ75586 544452 544949 + ClpXP_protease_specificity-enhancing_factor sspB AQZ75587 544991 546358 - cryptic_C4-dicarboxylate_transporter_DcuD dcuD_1 AQZ75588 546738 547529 + transcriptional_regulator_NanR Eco28_00537 AQZ75589 547651 548544 + N-acetylneuraminate_lyase Eco28_00538 AQZ75590 548653 550143 + sialic_acid_transporter nanT AQZ75591 550191 550880 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ AQZ75592 550877 551752 + N-acetylmannosamine_kinase Eco28_00541 AQZ75593 551749 552213 + cupin_superfamily_protein yhcH AQZ75594 552273 553400 - PD-(D/E)XK_nuclease_superfamily_protein yhcG AQZ75595 553584 555002 - glutamate_synthase_subunit_beta gltD AQZ75596 555015 559568 - glutamate_synthase_subunit_alpha gltB AQZ75597 560150 561079 + putative_radical_SAM_protein Eco28_00546 AQZ75598 561175 563511 + aerobic_respiration_control_sensor_protein_ArcB Eco28_00547 AQZ75599 563741 564394 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain protein yhbL AQZ75600 564391 565119 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AQZ75601 565116 565748 - PhoP_regulatory_network_protein_YrbL Eco28_00551 AQZ75602 565961 566233 - phosphohistidinoprotein-hexose Eco28_00552 AQZ75603 566230 567084 - glmZ(sRNA)-inactivating_NTPase, glucosamine-6-phosphate regulated yhbJ AQZ75604 567130 567621 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN AQZ75605 567739 568026 - sigma(54)_modulation_protein Eco28_00555 AQZ75606 568049 569482 - RNA_polymerase_factor_sigma-54 Eco28_00556 AQZ75607 569530 570255 - ABC_transporter_ATP-binding_protein Eco28_00557 AQZ75608 570262 570819 - lipopolysaccharide_transport_periplasmic_protein LptA yhbN AQZ75609 570788 571363 - lipopolysaccharide_export,_IM-tethered periplasmic protein of the LptBFGC export complex lptC AQZ75610 571360 571926 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase Eco28_00560 AQZ75611 571947 572933 - D-arabinose_5-phosphate_isomerase Eco28_00561 AQZ75612 572947 573924 - calcium/sodium:proton_antiporter yrbG Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AQZ75594 91 694 107.449856734 0.0 PJR32595.1 AQZ75593 99 317 100.0 2e-108 PJR32596.1 AQZ75592 98 564 100.0 0.0 PJR32597.1 AQZ75591 99 459 100.0 8e-162 PJR32598.1 AQZ75590 99 990 100.0 0.0 PJR32599.1 AQZ75589 100 611 100.0 0.0 PJR32600.1 AQZ75588 100 537 100.0 0.0 >> 55. CP048605_0 Source: Escherichia coli strain PapRG-06-5 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4143 Table of genes, locations, strands and annotations of subject cluster: QIB20811 3672849 3674294 + metalloprotease_TldD tldD QIB20812 3674422 3675351 - HTH-type_transcriptional_activator_AaeR aaeR QIB20813 3675534 3675737 + AaeX_family_protein G3M73_17130 QIB20814 3675745 3676677 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QIB20815 3676683 3678650 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIB20816 3678742 3679014 + hypothetical_protein G3M73_17145 QIB20817 3679070 3679333 - peroxide/acid_stress_response_protein_YhcN yhcN QIB20818 3679698 3680168 - transcriptional_regulator_ArgR argR QIB20819 3680603 3681541 + malate_dehydrogenase mdh QIB20820 3681604 3682671 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QIB20821 3682761 3684128 - serine_endoprotease_DegQ degQ QIB20822 3684282 3684680 - DUF1043_family_protein G3M73_17175 QIB20823 3684874 3686001 + cell_division_protein_ZapE G3M73_17180 QIB20824 3686220 3686648 + 50S_ribosomal_protein_L13 rplM QIB20825 3686664 3687056 + 30S_ribosomal_protein_S9 rpsI QIB20826 3687451 3688089 + stringent_starvation_protein_A sspA QIB20827 3688095 3688592 + ClpXP_protease_specificity-enhancing_factor sspB QIB20828 3688634 3690001 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIB20829 3690381 3691172 + transcriptional_regulator_NanR nanR QIB20830 3691294 3692187 + N-acetylneuraminate_lyase nanA QIB20831 3692296 3693786 + sialic_acid_transporter_NanT nanT QIB20832 3693834 3694523 + N-acetylmannosamine-6-phosphate_2-epimerase G3M73_17225 QIB20833 3694520 3695395 + N-acetylmannosamine_kinase G3M73_17230 QIB20834 3695392 3695856 + DUF386_domain-containing_protein G3M73_17235 QIB20835 3695916 3697043 - DUF1016_domain-containing_protein G3M73_17240 QIB20836 3697227 3698645 - FAD-dependent_oxidoreductase G3M73_17245 QIB22071 3698658 3703118 - glutamate_synthase_large_subunit gltB QIB20837 3703793 3704722 + TIGR01212_family_radical_SAM_protein G3M73_17255 QIB20838 3704818 3707154 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIB20839 3707384 3708037 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIB20840 3708034 3708762 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QIB20841 3708759 3709391 - PhoP_regulatory_network_protein_YrbL yrbL QIB20842 3709605 3709877 - PTS_phosphocarrier_protein_NPr npr QIB20843 3709874 3710728 - RNase_adapter_RapZ rapZ QIB20844 3710774 3711265 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QIB20845 3711383 3711670 - ribosome_hibernation_promoting_factor hpf QIB20846 3711693 3713126 - RNA_polymerase_factor_sigma-54 rpoN QIB20847 3713174 3713899 - LPS_export_ABC_transporter_ATP-binding_protein lptB QIB20848 3713906 3714463 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QIB20849 3714432 3715007 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QIB20850 3715004 3715570 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QIB20851 3715591 3716577 - arabinose-5-phosphate_isomerase_KdsD kdsD QIB20852 3716591 3717568 - calcium/sodium_antiporter G3M73_17330 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QIB20835 91 698 107.449856734 0.0 PJR32595.1 QIB20834 97 292 100.0 2e-98 PJR32596.1 QIB20833 98 560 100.0 0.0 PJR32597.1 QIB20832 99 456 100.0 1e-160 PJR32598.1 QIB20831 99 990 100.0 0.0 PJR32599.1 QIB20830 100 611 100.0 0.0 PJR32600.1 QIB20829 99 536 100.0 0.0 >> 56. CP049204_0 Source: Escherichia coli strain PapM-32-1 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 10 MultiGeneBlast score: 10.0 Cumulative Blast bit score: 4114 Table of genes, locations, strands and annotations of subject cluster: QIF17009 529196 530641 + metalloprotease_TldD tldD QIF17010 530769 531698 - HTH-type_transcriptional_activator_AaeR aaeR QIF17011 531881 532084 + AaeX_family_protein G6Z93_02515 QIF17012 532092 533024 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QIF17013 533030 534997 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIF17014 535089 535361 + hypothetical_protein G6Z93_02530 QIF17015 535417 535680 - peroxide/acid_stress_response_protein_YhcN yhcN QIF17016 536045 536515 - transcriptional_regulator_ArgR argR QIF17017 536950 537888 + malate_dehydrogenase mdh QIF17018 537951 539018 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QIF17019 539108 540475 - serine_endoprotease_DegQ degQ QIF17020 540629 541027 - DUF1043_family_protein G6Z93_02560 QIF17021 541221 542348 + cell_division_protein_ZapE G6Z93_02565 QIF17022 542567 542995 + 50S_ribosomal_protein_L13 rplM QIF17023 543011 543403 + 30S_ribosomal_protein_S9 rpsI QIF17024 543798 544436 + stringent_starvation_protein_A sspA QIF17025 544442 544939 + ClpXP_protease_specificity-enhancing_factor sspB QIF17026 544982 546349 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIF17027 546729 547520 + transcriptional_regulator_NanR nanR QIF17028 547642 548535 + N-acetylneuraminate_lyase nanA QIF17029 548644 550134 + sialic_acid_transporter_NanT nanT QIF17030 550182 550871 + N-acetylmannosamine-6-phosphate_2-epimerase G6Z93_02610 QIF20810 550868 551743 + N-acetylmannosamine_kinase nanK QIF17031 551740 552204 + DUF386_domain-containing_protein G6Z93_02620 QIF17032 552264 553391 - DUF1016_domain-containing_protein G6Z93_02625 QIF17033 553575 554993 - glutamate_synthase_subunit_GltD gltD QIF20811 555006 559466 - glutamate_synthase_large_subunit gltB QIF17034 560141 561070 + TIGR01212_family_radical_SAM_protein G6Z93_02640 QIF17035 561166 563502 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIF17036 563732 564385 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIF17037 564382 565110 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QIF17038 565107 565739 - PhoP_regulatory_network_protein_YrbL yrbL QIF17039 565953 566225 - PTS_phosphocarrier_protein_NPr npr QIF17040 566222 567076 - RNase_adapter_RapZ rapZ QIF17041 567122 567613 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QIF17042 567731 568018 - ribosome_hibernation_promoting_factor hpf QIF17043 568041 569474 - RNA_polymerase_factor_sigma-54 rpoN QIF17044 569522 570247 - LPS_export_ABC_transporter_ATP-binding_protein lptB QIF17045 570254 570811 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QIF17046 570780 571355 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QIF17047 571352 571918 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QIF17048 571939 572925 - arabinose-5-phosphate_isomerase_KdsD kdsD QIF17049 572939 573916 - calcium/sodium_antiporter G6Z93_02715 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QIF17032 91 697 107.449856734 0.0 PJR32595.1 QIF17031 98 313 100.0 6e-107 PJR32596.1 QIF20810 97 508 100.0 2e-179 PJR32597.1 QIF17030 99 459 100.0 8e-162 PJR32598.1 QIF17029 99 990 100.0 0.0 PJR32599.1 QIF17028 100 611 100.0 0.0 PJR32600.1 QIF17027 99 536 100.0 0.0 >> 57. CP010304_0 Source: Escherichia coli O157:H7 str. SS52, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.5 Cumulative Blast bit score: 3678 Table of genes, locations, strands and annotations of subject cluster: AJA28204 4101931 4102917 + Arabinose_5-phosphate_isomerase yrbH AJA28205 4102938 4103504 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase yrbI AJA28206 4103501 4104076 + Uncharacterized_protein_YrbK yrbK AJA28207 4104045 4104602 + LptA,_protein_essential_for_LPS_transport_across the periplasm yhbN AJA28208 4104609 4105334 + Lipopolysaccharide_ABC_transporter,_ATP-binding protein LptB yhbG AJA28209 4105382 4106815 + RNA_polymerase_sigma-54_factor_RpoN rpoN AJA28210 4106838 4107125 + Ribosome_hibernation_protein_YhbH yhbH AJA28211 4107243 4107734 + PTS_IIA-like_nitrogen-regulatory_protein_PtsN ptsN AJA28212 4107780 4108634 + putative_P-loop-containing_kinase yhbJ AJA28213 4108631 4108903 + Phosphocarrier_protein,_nitrogen_regulation associated ptsO AJA28214 4109117 4109749 + Putative_uncharacterized_protein_YrbL yrbL AJA28215 4109746 4110474 - Monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AJA28216 4110471 4111124 - Sigma_cross-reacting_protein_27A yhbL AJA28217 4111354 4113690 - Aerobic_respiration_control_sensor_protein_arcB arcB AJA28218 4113786 4114715 - putative_Fe-S_oxidoreductase yhcC AJA28219 4115296 4119849 + Glutamate_synthase_[NADPH]_large_chain gltB AJA28220 4119862 4121280 + Glutamate_synthase_[NADPH]_small_chain gltD AJA28221 4121464 4122513 + Putative_uncharacterized_protein_YhcG yhcG AJA28222 4122573 4123037 - Putative_sugar_isomerase_involved_in_processing of exogenous sialic acid yhcH AJA28223 4123034 4123942 - N-acetylmannosamine_kinase yhcI AJA28224 4123906 4124595 - N-acetylmannosamine-6-phosphate_2-epimerase yhcJ AJA28225 4124643 4126133 - Sialic_acid_transporter_(permease)_NanT nanT AJA28226 4126242 4127135 - N-acetylneuraminate_lyase nanA AJA28227 4127257 4128039 - Transcriptional_regulator_NanR nanR AJA28228 4128428 4129792 + Putative_cryptic_C4-dicarboxylate_transporter DcuD dcuD AJA28229 4129827 4130324 - ClpXP_protease_specificity-enhancing_factor_/ Stringent starvation protein B sspB AJA28230 4130330 4130968 - Stringent_starvation_protein_A sspA AJA28231 4131363 4131755 - SSU_ribosomal_protein_S9p_(S16e) rpsI AJA28232 4131771 4132199 - LSU_ribosomal_protein_L13p_(L13Ae) rplM AJA28233 4132418 4133545 - ATPase,_AFG1_family yhcM AJA28234 4133733 4134137 + Putative_cytochrome_d_ubiquinol_oxidase_subunit III (Cytochrome bd-I oxidase subunit III) yhcB AJA28235 4134291 4135658 + Outer_membrane_stress_sensor_protease_DegQ, serine protease degQ AJA28236 4135748 4136815 + Outer_membrane_stress_sensor_protease_DegS degS AJA28237 4136879 4137817 - Malate_dehydrogenase mdh AJA28238 4138252 4138722 + Arginine_pathway_regulatory_protein_ArgR, repressor of arg regulon argR AJA28239 4139036 4139350 + hypothetical_protein SS52_4423 AJA28240 4139406 4139678 - putative_ribonuclease_inhibitor yhcO AJA28241 4139770 4141737 - fusaric_acid_resistance_protein_FusB/FusC yhcP AJA28242 4141743 4142672 - Fusaric_acid_resistance_protein_fusE yhcQ AJA28243 4142680 4142952 - putative_membrane_protein SS52_4427 AJA28244 4143066 4143995 + Putative_transcriptional_regulator_LYSR-type qseA AJA28245 4144129 4145574 - TldD_protein,_part_of_TldE/TldD_proteolytic complex tldD AJA28246 4145730 4149530 - putative_exported_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AJA28221 100 723 100.0 0.0 PJR32595.1 AJA28222 100 318 100.0 6e-109 PJR32596.1 AJA28223 100 572 100.0 0.0 PJR32597.1 AJA28224 100 461 100.0 2e-162 PJR32598.1 AJA28225 100 993 100.0 0.0 PJR32599.1 AJA28226 100 611 100.0 0.0 >> 58. CP008805_0 Source: Escherichia coli O157:H7 str. SS17, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.5 Cumulative Blast bit score: 3678 Table of genes, locations, strands and annotations of subject cluster: AIF95744 4137196 4138182 + Arabinose_5-phosphate_isomerase yrbH AIF95745 4138203 4138769 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase yrbI AIF95746 4138766 4139341 + lipopolysaccharide_exporter_periplasmic_protein yrbK AIF95747 4139310 4139867 + lipopolysaccharide_transport_periplasmic protein yhbN AIF95748 4139874 4140599 + Lipopolysaccharide_ABC_transporter,_ATP-binding protein LptB yhbG AIF95749 4140647 4142080 + RNA_polymerase_sigma-54_factor_RpoN rpoN AIF95750 4142103 4142390 + Ribosome_hibernation_protein_YhbH yhbH AIF95751 4142508 4142999 + PTS_IIA-like_nitrogen-regulatory_protein_PtsN ptsN AIF95752 4143045 4143899 + putative_P-loop-containing_kinase yhbJ AIF95753 4143896 4144168 + Phosphocarrier_protein,_nitrogen_regulation associated ptsO AIF95754 4144382 4145014 + Putative_uncharacterized_protein_YrbL yrbL AIF95755 4145011 4145739 - Monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AIF95756 4145736 4146389 - Sigma_cross-reacting_protein_27A yhbL AIF95757 4146619 4148955 - Aerobic_respiration_control_sensor_protein_arcB arcB AIF95758 4149051 4149980 - putative_Fe-S_oxidoreductase yhcC AIF95759 4149999 4150277 + hypothetical_protein SS17_4234 AIF95760 4150559 4155112 + Glutamate_synthase_[NADPH]_large_chain gltB AIF95761 4155125 4156543 + Glutamate_synthase_[NADPH]_small_chain gltD AIF95762 4156727 4157776 + Putative_cytoplasmic_protein yhcG AIF95763 4157836 4158300 - Putative_sugar_isomerase_involved_in_processing of exogenous sialic acid yhcH AIF95764 4158297 4159205 - N-acetylmannosamine_kinase yhcI AIF95765 4159169 4159858 - N-acetylmannosamine-6-phosphate_2-epimerase yhcJ AIF95766 4159906 4161396 - Sialic_acid_transporter_(permease)_NanT nanT AIF95767 4161505 4162398 - N-acetylneuraminate_lyase nanA AIF95768 4162520 4163302 - Transcriptional_regulator_NanR nanR AIF95769 4163691 4165055 + Putative_cryptic_C4-dicarboxylate_transporter DcuD dcuD AIF95770 4165090 4165587 - ClpXP_protease_specificity-enhancing_factor_/ Stringent starvation protein B sspB AIF95771 4165593 4166231 - Stringent_starvation_protein_A sspA AIF95772 4166334 4166555 - hypothetical_protein SS17_4247 AIF95773 4166626 4167018 - SSU_ribosomal_protein_S9p_(S16e) rpsI AIF95774 4167034 4167462 - LSU_ribosomal_protein_L13p_(L13Ae) rplM AIF95775 4167681 4168808 - ATPase yhcM AIF95776 4168996 4169400 + Putative_cytochrome_d_ubiquinol_oxidase_subunit III yhcB AIF95777 4169554 4170921 + Outer_membrane_stress_sensor_protease_DegQ, serine protease degQ AIF95778 4171011 4172078 + Outer_membrane_stress_sensor_protease_DegS degS AIF95779 4172142 4173080 - Malate_dehydrogenase mdh AIF95780 4173515 4173985 + Arginine_pathway_regulatory_protein_ArgR argR AIF95781 4174299 4174613 + putative_exported_protein yhcN AIF95782 4174668 4174940 - putative_ribonuclease_inhibitor yhcO AIF95783 4175032 4176999 - p-hydroxybenzoic_acid_efflux_subunit_AaeB yhcP AIF95784 4177005 4177934 - Fusaric_acid_resistance_protein_fusE yhcQ AIF95785 4177942 4178145 - efflux_system_membrane_protein yhcR AIF95786 4178328 4179257 + Putative_transcriptional_regulator_LYSR-type qseA AIF95787 4179391 4180836 - TldD_protein tldD AIF95788 4180992 4184792 - hypothetical_protein SS17_4263 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AIF95762 100 723 100.0 0.0 PJR32595.1 AIF95763 100 318 100.0 6e-109 PJR32596.1 AIF95764 100 572 100.0 0.0 PJR32597.1 AIF95765 100 461 100.0 2e-162 PJR32598.1 AIF95766 100 993 100.0 0.0 PJR32599.1 AIF95767 100 611 100.0 0.0 >> 59. AE005174_0 Source: Escherichia coli O157:H7 str. EDL933 genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.5 Cumulative Blast bit score: 3678 Table of genes, locations, strands and annotations of subject cluster: AAG58331 4150835 4151821 + putative_isomerase yrbH AAG58332 4151842 4152408 + orf,_hypothetical_protein yrbI AAG58333 4152405 4152980 + orf,_hypothetical_protein yrbK AAG58334 4152949 4153506 + orf,_hypothetical_protein yhbN AAG58335 4153513 4154238 + putative_ATP-binding_component_of_a_transport system yhbG AAG58336 4154286 4155719 + RNA_polymerase,_sigma(54_or_60)_factor;_nitrogen and fermentation regulation rpoN AAG58337 4155742 4156029 + probable_sigma-54_modulation_protein yhbH AAG58338 4156147 4156638 + phosphotransferase_system_enzyme_IIA,_regulates N metabolism ptsN AAG58339 4156684 4157538 + orf,_hypothetical_protein yhbJ AAG58340 4157535 4157807 + phosphocarrier_protein_HPr-like_NPr,_nitrogen related, exchanges phosphate with Enzyme I, Hpr ptsO AAG58341 4158021 4158653 + orf,_hypothetical_protein yrbL AAG58342 4158650 4159378 - putative_peptidoglycan_enzyme mtgA AAG58343 4159375 4160037 - sigma_cross-reacting_protein_27A_(SCRP-27A) yhbL AAG58344 4160259 4162595 - aerobic_respiration_sensor-response_protein; arcB AAG58345 4162691 4163620 - orf,_hypothetical_protein yhcC AAG58346 4164201 4168754 + glutamate_synthase,_large_subunit gltB AAG58347 4168767 4170185 + glutamate_synthase,_small_subunit gltD AAG58348 4170369 4171418 + orf,_hypothetical_protein yhcG AAG58349 4171478 4171942 - orf,_hypothetical_protein yhcH AAG58350 4171939 4172847 - putative_NAGC-like_transcriptional_regulator yhcI AAG58351 4172811 4173500 - putative_enzyme yhcJ AAG58352 4173548 4175068 - sialic_acid_transporter nanT AAG58353 4175147 4176040 - N-acetylneuraminate_lyase_(aldolase);_catabolism of sialic acid; not K-12 nanA AAG58354 4176162 4176953 - putative_FADA-type_transcriptional_regulator yhcK AAG58355 4177333 4178697 + putative_transport_protein Z4585 AAG58356 4178732 4179229 - stringent_starvation_protein_B sspB AAG58357 4179235 4179873 - regulator_of_transcription;_stringent_starvation protein A sspA AAG58358 4180268 4180660 - 30S_ribosomal_subunit_protein_S9 rpsI AAG58359 4180676 4181104 - 50S_ribosomal_subunit_protein_L13 rplM AAG58360 4181323 4182450 - hypothetical_protein yhcM AAG58361 4182638 4183042 + orf,_hypothetical_protein yhcB AAG58362 4183196 4184563 + serine_endoprotease degQ AAG58363 4184653 4185720 + protease degS AAG58364 4185784 4186722 - malate_dehydrogenase mdh AAG58365 4187157 4187627 + repressor_of_arg_regulon;_cer-mediated_site specific recombination argR AAG58366 4187941 4188255 + orf,_hypothetical_protein yhcN AAG58367 4188311 4188583 - orf,_hypothetical_protein yhcO AAG58368 4188676 4190643 - orf,_hypothetical_protein yhcP AAG58369 4190649 4191578 - putative_membrane_protein yhcQ AAG58370 4191586 4191858 - orf,_hypothetical_protein yhcR AAG58371 4191972 4192901 + quorum_sensing_Escherichia_coli_regulator_A qseA AAG58372 4193035 4194480 - suppresses_inhibitory_activity_of_CsrA tldD AAG58373 4194636 4198436 - hypothetical_protein Z4604 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AAG58348 100 723 100.0 0.0 PJR32595.1 AAG58349 100 318 100.0 6e-109 PJR32596.1 AAG58350 100 572 100.0 0.0 PJR32597.1 AAG58351 100 461 100.0 2e-162 PJR32598.1 AAG58352 100 993 100.0 0.0 PJR32599.1 AAG58353 100 611 100.0 0.0 >> 60. CP001925_0 Source: Escherichia coli Xuzhou21, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.5 Cumulative Blast bit score: 3676 Table of genes, locations, strands and annotations of subject cluster: AFJ30873 4010879 4011865 + D-arabinose_5-phosphate_isomerase CDCO157_3817 AFJ30874 4011886 4012452 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase CDCO157_3818 AFJ30875 4012449 4013024 + hypothetical_protein CDCO157_3819 AFJ30876 4012993 4013550 + lipopolysaccharide_transport_periplasmic_protein LptA CDCO157_3820 AFJ30877 4013557 4014282 + putative_ABC_transporter_ATP-binding_protein YhbG CDCO157_3821 AFJ30878 4014330 4015763 + RNA_polymerase_factor_sigma-54 CDCO157_3822 AFJ30879 4015786 4016073 + putative_sigma(54)_modulation_protein CDCO157_3823 AFJ30880 4016191 4016682 + PTS_IIA-like_nitrogen-regulatory_protein_PtsN CDCO157_3824 AFJ30881 4016728 4017582 + hypothetical_protein CDCO157_3825 AFJ30882 4017579 4017851 + phosphohistidinoprotein-hexose CDCO157_3826 AFJ30883 4018065 4018697 + hypothetical_protein CDCO157_3827 AFJ30884 4018694 4019422 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AFJ30885 4019419 4020072 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain CDCO157_3829 AFJ30886 4020302 4022638 - aerobic_respiration_control_sensor_protein_ArcB CDCO157_3830 AFJ30887 4022734 4023663 - hypothetical_protein CDCO157_3831 AFJ30888 4024244 4028797 + glutamate_synthase_subunit_alpha gltB AFJ30889 4028810 4030228 + glutamate_synthase_subunit_beta gltD AFJ30890 4030412 4031461 + hypothetical_protein CDCO157_3834 AFJ30891 4031521 4031985 - hypothetical_protein CDCO157_3835 AFJ30892 4031982 4032857 - N-acetylmannosamine_kinase CDCO157_3836 AFJ30893 4032854 4033543 - N-acetylmannosamine-6-phosphate_2-epimerase CDCO157_3837 AFJ30894 4033591 4035081 - putative_sialic_acid_transporter CDCO157_3838 AFJ30895 4035190 4036083 - N-acetylneuraminate_lyase CDCO157_3839 AFJ30896 4036205 4036987 - transcriptional_regulator_NanR CDCO157_3840 AFJ30897 4037376 4038740 + putative_cryptic_C4-dicarboxylate_transporter DcuD CDCO157_3841 AFJ30898 4038775 4039272 - ClpXP_protease_specificity-enhancing_factor CDCO157_3842 AFJ30899 4039278 4039916 - stringent_starvation_protein_A sspA AFJ30900 4040311 4040703 - 30S_ribosomal_protein_S9 rpsI AFJ30901 4040719 4041147 - 50S_ribosomal_protein_L13 rplM AFJ30902 4041366 4042493 - hypothetical_protein CDCO157_3846 AFJ30903 4042681 4043085 + cytochrome_d_ubiquinol_oxidase_subunit_III CDCO157_3847 AFJ30904 4043239 4044606 + serine_endoprotease CDCO157_3848 AFJ30905 4044696 4045763 + serine_endoprotease CDCO157_3849 AFJ30906 4045827 4046765 - malate_dehydrogenase CDCO157_3850 AFJ30907 4047200 4047670 + arginine_repressor CDCO157_3851 AFJ30908 4047984 4048298 + hypothetical_protein CDCO157_3852 AFJ30909 4048354 4048626 - hypothetical_protein CDCO157_3853 AFJ30910 4048718 4050685 - p-hydroxybenzoic_acid_efflux_subunit_AaeB CDCO157_3854 AFJ30911 4050691 4051620 - p-hydroxybenzoic_acid_efflux_subunit_AaeA CDCO157_3855 AFJ30912 4051628 4051831 - hypothetical_protein CDCO157_3856 AFJ30913 4052014 4052943 + putative_DNA-binding_transcriptional_regulator CDCO157_3857 AFJ30914 4053077 4054522 - protease_TldD tldD AFJ30915 4054678 4058478 - hypothetical_protein CDCO157_3859 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AFJ30890 100 723 100.0 0.0 PJR32595.1 AFJ30891 100 318 100.0 6e-109 PJR32596.1 AFJ30892 100 570 100.0 0.0 PJR32597.1 AFJ30893 100 461 100.0 2e-162 PJR32598.1 AFJ30894 100 993 100.0 0.0 PJR32599.1 AFJ30895 100 611 100.0 0.0 >> 61. CP001164_0 Source: Escherichia coli O157:H7 str. EC4115, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.5 Cumulative Blast bit score: 3676 Table of genes, locations, strands and annotations of subject cluster: ACI35591 4185386 4186372 + arabinose_5-phosphate_isomerase kdsD ACI36027 4186393 4186959 + 3-deoxy-manno-octulosonate-8-phosphatase kdsC ACI39764 4186956 4187531 + conserved_hypothetical_protein ECH74115_4521 ACI34928 4187500 4188057 + lipopolysaccharide_ABC_transporter,_periplasmic lipopolysaccharide-binding protein lptA ACI36932 4188064 4188789 + lipopolysaccharide_ABC_transporter,_ATP-binding protein lptB ACI36079 4188837 4190270 + RNA_polymerase_sigma-54_factor rpoN ACI35700 4190293 4190580 + ribosomal_subunit_interface_protein yfiA ACI34901 4190698 4191189 + PTS_IIA-like_nitrogen-regulatory_protein_PtsN ptsN ACI39259 4191235 4192089 + conserved_hypothetical_protein ECH74115_4527 ACI39699 4192086 4192358 + phosphocarrier_protein_NPr ptsO ACI37242 4192572 4193204 + conserved_hypothetical_protein ECH74115_4530 ACI38137 4193201 4193929 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA ACI37357 4193926 4194579 - enhancing_lycopene_biosynthesis_protein_2 elbB ACI36759 4194809 4197145 - aerobic_respiration_control_sensor_protein_ArcB arcB ACI35412 4197241 4198170 - radical_SAM_protein,_TIGR01212_family ECH74115_4534 ACI35635 4198751 4203304 + glutamate_synthase_(NADPH),_large_subunit gltB ACI38523 4203317 4204735 + glutamate_synthase_(NADPH),_small_subunit gltD ACI39228 4204919 4205968 + conserved_hypothetical_protein ECH74115_4537 ACI34679 4206028 4206492 - conserved_hypothetical_protein ECH74115_4538 ACI35744 4206489 4207364 - ROK_family_protein ECH74115_4539 ACI35561 4207361 4208050 - putative_N-acetylmannosamine-6-phosphate 2-epimerase ECH74115_4540 ACI36447 4208098 4209588 - MFS_transporter,_sialate:H+_symporter_(SHS) family nanT1 ACI37043 4209697 4210590 - N-acetylneuraminate_lyase nanA ACI37943 4210712 4211494 - transcriptional_regulator_NanR nanR ACI37787 4213282 4213779 - stringent_starvation_protein_B sspB ACI36861 4213785 4214423 - stringent_starvation_protein_A sspA ACI35529 4214818 4215210 - ribosomal_protein_S9 rpsI ACI34734 4215226 4215654 - ribosomal_protein_L13 rplM ACI39495 4215873 4217000 - ATPase,_AFG1_family ECH74115_4549 ACI38767 4217194 4217592 + conserved_hypothetical_protein ECH74115_4550 ACI38552 4217746 4219113 + serine_peptidase_DegQ degQ ACI39138 4219203 4220270 + periplasmic_serine_peptidase_DegS degS ACI38419 4220334 4221272 - malate_dehydrogenase,_NAD-dependent mdh ACI36703 4221707 4222177 + arginine_repressor argR ACI34777 4222491 4222805 + protein_YcfR ycfR ACI35343 4222861 4223133 - conserved_hypothetical_protein ECH74115_4556 ACI39169 4223225 4225192 - p-hydroxybenzoic_acid_efflux_pump_subunit_aaeB aaeB ACI35080 4225198 4226127 - p-hydroxybenzoic_acid_efflux_pump_subunit_aaeA aaeA ACI38291 4226135 4226407 - protein_AaeX aaeX ACI38866 4226521 4227450 + transcriptional_activator_AaeR aaeR ACI37663 4227584 4229029 - protein_TldD tldD ACI37413 4229185 4232985 - conserved_hypothetical_protein_TIGR02099 ECH74115_4562 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ACI39228 100 723 100.0 0.0 PJR32595.1 ACI34679 100 318 100.0 6e-109 PJR32596.1 ACI35744 100 570 100.0 0.0 PJR32597.1 ACI35561 100 461 100.0 2e-162 PJR32598.1 ACI36447 100 993 100.0 0.0 PJR32599.1 ACI37043 100 611 100.0 0.0 >> 62. CP007133_0 Source: Escherichia coli O145:H28 str. RM12761, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.5 Cumulative Blast bit score: 3653 Table of genes, locations, strands and annotations of subject cluster: AHY66908 3920933 3921919 + Arabinose_5-phosphate_isomerase yrbH AHY66909 3921940 3922506 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase yrbI AHY66910 3922503 3923078 + Uncharacterized_protein_YrbK yrbK AHY66911 3923047 3923604 + LptA,_protein_essential_for_LPS_transport_across the periplasm ECRM12761_19370 AHY66912 3923611 3924336 + Lipopolysaccharide_ABC_transporter,_ATP-binding protein LptB yhbG AHY66913 3924384 3925817 + RNA_polymerase_sigma-54_factor_RpoN rpoN AHY66914 3925840 3926127 + Ribosome_hibernation_protein_YhbH yhbH AHY66915 3926245 3926736 + PTS_IIA-like_nitrogen-regulatory_protein_PtsN ptsN AHY66916 3926782 3927636 + putative_P-loop-containing_kinase yhbJ AHY66917 3927633 3927905 + Phosphocarrier_protein,_nitrogen_regulation associated ptsO AHY66918 3928118 3928750 + Putative_uncharacterized_protein_YrbL yrbL AHY66919 3928747 3929475 - Monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AHY66920 3929472 3930125 - Sigma_cross-reacting_protein_27A yhbL AHY66921 3930355 3932691 - Aerobic_respiration_control_sensor_protein_arcB arcB AHY66922 3932787 3933716 - putative_Fe-S_oxidoreductase yhcC AHY66923 3934298 3938851 + Glutamate_synthase_[NADPH]_large_chain gltB AHY66924 3938864 3940282 + Glutamate_synthase_[NADPH]_small_chain gltD AHY66925 3940466 3941515 + Putative_cytoplasmic_protein yhcG AHY66926 3941575 3942039 - Putative_sugar_isomerase_involved_in_processing of exogenous sialic acid yhcH AHY66927 3942036 3942911 - N-acetylmannosamine_kinase yhcI AHY66928 3942908 3943597 - N-acetylmannosamine-6-phosphate_2-epimerase yhcJ AHY66929 3943645 3945135 - Sialic_acid_transporter_(permease)_NanT nanT AHY66930 3945244 3946137 - N-acetylneuraminate_lyase nanA AHY66931 3946259 3947041 - Transcriptional_regulator_NanR nanR AHY66932 3947421 3948788 + Putative_cryptic_C4-dicarboxylate_transporter DcuD ECRM12761_19475 AHY66933 3948830 3949327 - ClpXP_protease_specificity-enhancing_factor_/ Stringent starvation protein B sspB AHY66934 3949333 3949971 - Stringent_starvation_protein_A sspA AHY66935 3950366 3950758 - SSU_ribosomal_protein_S9p_(S16e) rpsI AHY66936 3950774 3951202 - LSU_ribosomal_protein_L13p_(L13Ae) rplM AHY66937 3951421 3952548 - ATPase,_AFG1_family yhcM AHY66938 3952742 3953140 + Putative_cytochrome_d_ubiquinol_oxidase_subunit III (Cytochrome bd-I oxidase subunit III) yhcB AHY66939 3953294 3954661 + Outer_membrane_stress_sensor_protease_DegQ, serine protease degQ AHY66940 3954751 3955818 + Outer_membrane_stress_sensor_protease_DegS degS AHY66941 3955881 3956819 - Malate_dehydrogenase mdh AHY66942 3957254 3957724 + Arginine_pathway_regulatory_protein_ArgR, repressor of arg regulon argR AHY66943 3958089 3958352 + putative_exported_protein yhcN AHY66944 3958408 3958680 - putative_ribonuclease_inhibitor yhcO AHY66945 3958772 3960739 - Fusaric_acid_resistance_protein_FusB/Fusaric acid resistance protein FusC yhcP AHY66946 3960745 3961677 - Fusaric_acid_resistance_protein_fusE yhcQ AHY66947 3961685 3961957 - putative_membrane_protein yhcR AHY66948 3962089 3963000 + Putative_transcriptional_regulator_LYSR-type qseA AHY66949 3963128 3964573 - TldD_protein,_part_of_proposed_TldE/TldD proteolytic complex tldD AHY66950 3964729 3968481 - putative_exported_protein ECRM12761_19565 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AHY66925 98 712 100.0 0.0 PJR32595.1 AHY66926 100 318 100.0 6e-109 PJR32596.1 AHY66927 98 561 100.0 0.0 PJR32597.1 AHY66928 100 461 100.0 2e-162 PJR32598.1 AHY66929 99 990 100.0 0.0 PJR32599.1 AHY66930 100 611 100.0 0.0 >> 63. CP007136_0 Source: Escherichia coli O145:H28 str. RM12581, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.5 Cumulative Blast bit score: 3639 Table of genes, locations, strands and annotations of subject cluster: AHY72633 4052604 4053590 + Arabinose_5-phosphate_isomerase yrbH AHY72634 4053611 4054177 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase yrbI AHY72635 4054174 4054749 + Uncharacterized_protein_YrbK yrbK AHY72636 4054718 4055275 + LptA,_protein_essential_for_LPS_transport_across the periplasm yhbN AHY72637 4055282 4056007 + Lipopolysaccharide_ABC_transporter,_ATP-binding protein LptB yhbG AHY72638 4056055 4057488 + RNA_polymerase_sigma-54_factor_RpoN rpoN AHY72639 4057511 4057798 + Ribosome_hibernation_protein_YhbH yhbH AHY72640 4057916 4058407 + PTS_IIA-like_nitrogen-regulatory_protein_PtsN ptsN AHY72641 4058453 4059307 + putative_P-loop-containing_kinase yhbJ AHY72642 4059304 4059576 + Phosphocarrier_protein,_nitrogen_regulation associated ptsO AHY72643 4059789 4060421 + Putative_uncharacterized_protein_YrbL yrbL AHY72644 4060418 4061146 - Monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AHY72645 4061143 4061796 - Sigma_cross-reacting_protein_27A yhbL AHY72646 4062026 4064362 - Aerobic_respiration_control_sensor_protein_arcB arcB AHY72647 4064458 4065387 - putative_Fe-S_oxidoreductase yhcC AHY72648 4065969 4070522 + Glutamate_synthase_[NADPH]_large_chain gltB AHY72649 4070535 4071953 + Glutamate_synthase_[NADPH]_small_chain gltD AHY72650 4072137 4073264 + Putative_cytoplasmic_protein yhcG AHY72651 4073324 4073788 - Putative_sugar_isomerase_involved_in_processing of exogenous sialic acid yhcH AHY72652 4073785 4074660 - N-acetylmannosamine_kinase yhcI AHY72653 4074657 4075346 - N-acetylmannosamine-6-phosphate_2-epimerase yhcJ AHY72654 4075394 4076884 - Sialic_acid_transporter_(permease)_NanT nanT AHY72655 4076993 4077886 - N-acetylneuraminate_lyase nanA AHY72656 4078008 4078790 - Transcriptional_regulator_NanR nanR AHY72657 4079170 4080537 + Putative_cryptic_C4-dicarboxylate_transporter DcuD dcuD AHY72658 4080579 4081076 - ClpXP_protease_specificity-enhancing_factor_/ Stringent starvation protein B sspB AHY72659 4081082 4081720 - Stringent_starvation_protein_A sspA AHY72660 4082115 4082507 - SSU_ribosomal_protein_S9p_(S16e) rpsI AHY72661 4082523 4082951 - LSU_ribosomal_protein_L13p_(L13Ae) rplM AHY72662 4083170 4084297 - ATPase,_AFG1_family yhcM AHY72663 4084491 4084889 + Putative_cytochrome_d_ubiquinol_oxidase_subunit III (Cytochrome bd-I oxidase subunit III) yhcB AHY72664 4085043 4086410 + Outer_membrane_stress_sensor_protease_DegQ, serine protease degQ AHY72665 4086500 4087567 + Outer_membrane_stress_sensor_protease_DegS degS AHY72666 4087630 4088568 - Malate_dehydrogenase mdh AHY72667 4089003 4089473 + Arginine_pathway_regulatory_protein_ArgR, repressor of arg regulon argR AHY72668 4089838 4090101 + putative_exported_protein yhcN AHY72669 4090157 4090429 - putative_ribonuclease_inhibitor yhcO AHY72670 4090521 4092488 - Fusaric_acid_resistance_protein_FusB/Fusaric acid resistance protein FusC yhcP AHY72671 4092494 4093426 - Fusaric_acid_resistance_protein_fusE yhcQ AHY72672 4093434 4093706 - putative_membrane_protein yhcR AHY72673 4093838 4094749 + Putative_transcriptional_regulator_LYSR-type qseA AHY72674 4094877 4096322 - TldD_protein tldD AHY72675 4096478 4100278 - putative_exported_protein ECRM12581_20725 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AHY72650 91 698 107.449856734 0.0 PJR32595.1 AHY72651 100 318 100.0 6e-109 PJR32596.1 AHY72652 98 561 100.0 0.0 PJR32597.1 AHY72653 100 461 100.0 2e-162 PJR32598.1 AHY72654 99 990 100.0 0.0 PJR32599.1 AHY72655 100 611 100.0 0.0 >> 64. CP006736_0 Source: Shigella dysenteriae 1617, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.5 Cumulative Blast bit score: 3592 Table of genes, locations, strands and annotations of subject cluster: AHA67315 3082582 3083589 + Arabinose-5-phosphate_isomerase Asd1617_04488 AHA67316 3083610 3084176 + 3-deoxy-manno-octulosonate-8-phosphatase Asd1617_04489 AHA67317 3084173 3084748 + Hypothetical_protein Asd1617_04490 AHA67318 3084696 3085274 + LPS_ABC_transporter_periplasmic_component Asd1617_04491 AHA67319 3085281 3086006 + LPS_ABC_transporter_ATP-binding_protein Asd1617_04492 AHA67320 3086054 3087487 + RNA_polymerase_sigma-54_factor_rpoN Asd1617_04493 AHA67321 3087510 3087797 + Ribosome-associated_factor_Y Asd1617_04494 AHA67322 3087891 3088406 + Nitrogen_regulatory_IIA_protein Asd1617_04495 AHA67323 3088452 3089306 + ATP-binding_protein_(contains_P-loop) Asd1617_04496 AHA67324 3089303 3089575 + Phosphocarrier_protein_NPr Asd1617_04497 AHA67325 3089789 3090421 + Hypothetical_protein Asd1617_04498 AHA67326 3090418 3091146 - Monofunctional_biosynthetic_peptidoglycan transglycosylase Asd1617_04499 AHA67327 3091143 3091805 - Enhancing_lycopene_biosynthesis_protein_2 Asd1617_04500 AHA67328 3092026 3094362 - Aerobic_respiration_control_sensor_protein_arcB Asd1617_04501 AHA67329 3094458 3095420 - Radical_SAM_superfamily_protein Asd1617_04502 AHA67330 3095433 3095537 - hypothetical_protein Asd1617_04503 AHA67331 3095899 3100521 + Glutamate_synthase_[nadph]_large_chain Asd1617_04504 AHA67332 3100534 3101145 + Glutamate_synthase_[nadph]_small_chain Asd1617_04505 AHA67333 3101265 3101915 + Glutamate_synthase_[nadph]_small_chain Asd1617_04506 AHA67334 3102099 3103226 + Putative_cytosolic_protein Asd1617_04507 AHA67335 3103286 3103750 - Putative_cytosolic_protein Asd1617_04508 AHA67336 3103747 3104661 - N-acetylmannosamine_kinase Asd1617_04509 AHA67337 3104619 3105350 - N-acetylmannosamine-6-phosphate_2-epimerase Asd1617_04510 AHA67338 3105356 3106876 - Sialic_acid_transporter Asd1617_04511 AHA67339 3106955 3107848 - N-acetylneuraminate_lyase Asd1617_04512 AHA67340 3108043 3108834 - Transcriptional_regulator,_GntR_family_protein Asd1617_04513 AHA67341 3109096 3109185 - Transposase Asd1617_04514 AHA67342 3109223 3109312 - Transposase Asd1617_04515 AHA67343 3109522 3109740 - Transposase Asd1617_04516 AHA67344 3109718 3109879 + Transposase Asd1617_04517 AHA67345 3109895 3110056 - Transposase Asd1617_04518 AHA67346 3109952 3110131 + Transposase Asd1617_04519 AHA67347 3110197 3110508 + Anaerobic_C4-dicarboxylate_transporter_family protein dcuD Asd1617_04520 AHA67348 3110551 3111048 - Stringent_starvation_protein_B Asd1617_04521 AHA67349 3111054 3111692 - Stringent_starvation_protein_A Asd1617_04522 AHA67350 3112086 3112478 - SSU_ribosomal_protein_S9P Asd1617_04523 AHA67351 3112494 3112997 - LSU_ribosomal_protein_L13P Asd1617_04524 AHA67352 3113141 3114268 - ATPase Asd1617_04525 AHA67353 3114456 3114860 + Putative_membrane_associated_protein Asd1617_04526 AHA67354 3114972 3116381 + Endopeptidase_degQ Asd1617_04527 AHA67355 3116471 3117538 + Endopeptidase_degS Asd1617_04528 AHA67356 3117601 3118029 - Malate_dehydrogenase Asd1617_04529 AHA67357 3118031 3118606 - Malate_dehydrogenase Asd1617_04530 AHA67358 3118975 3119445 + Arginine_repressor,_argR Asd1617_04531 AHA67359 3119810 3120073 + Hypothetical_protein Asd1617_04532 AHA67360 3120129 3120401 - Ribonuclease_inhibitor_barstar Asd1617_04533 AHA67361 3120493 3122460 - Fusaric_acid_resistance_protein_fusB Asd1617_04534 AHA67362 3122466 3123398 - Fusaric_acid_resistance_protein_fusE Asd1617_04535 AHA67363 3123406 3123678 - Putative_membrane_associated_protein Asd1617_04536 AHA67364 3123792 3124721 + Transcriptional_regulator,_LysR_family_protein Asd1617_04537 AHA67365 3124849 3126294 - Microcin-processing_peptidase_2_(TldD) Asd1617_04538 AHA67366 3126450 3128408 - Putative_exported_protein Asd1617_04539 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AHA67334 92 707 107.449856734 0.0 PJR32595.1 AHA67335 99 317 100.0 2e-108 PJR32596.1 AHA67336 97 511 100.0 3e-180 PJR32597.1 AHA67337 99 457 100.0 5e-161 PJR32598.1 AHA67338 99 990 100.0 0.0 PJR32599.1 AHA67339 100 611 100.0 0.0 >> 65. CP018245_0 Source: Escherichia coli strain 472, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.5 Cumulative Blast bit score: 3490 Table of genes, locations, strands and annotations of subject cluster: API22653 4127640 4128206 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BFL23_22725 API22654 4128203 4128778 + LPS_export_ABC_transporter_periplasmic_protein LptC BFL23_22730 API22655 4128747 4129304 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA BFL23_22735 API22656 4129311 4130036 + LPS_export_ABC_transporter_ATP-binding_protein BFL23_22740 API22657 4130084 4131517 + RNA_polymerase_factor_sigma-54 BFL23_22745 API22658 4131540 4131827 + ribosomal_subunit_interface_protein BFL23_22750 API22659 4131945 4132436 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN BFL23_22755 API22660 4132482 4133336 + RNase_adaptor_protein_RapZ BFL23_22760 API22661 4133333 4133605 + phosphohistidinoprotein-hexose phosphotransferase BFL23_22765 API22662 4133819 4134451 + hypothetical_protein BFL23_22770 API22663 4134448 4135176 - monofunctional_biosynthetic_peptidoglycan transglycosylase BFL23_22775 API22664 4135173 4135826 - isoprenoid_biosynthesis_protein_ElbB BFL23_22780 API22665 4136056 4138392 - aerobic_respiration_two-component_sensor histidine kinase ArcB BFL23_22785 API24152 4138488 4139417 - TIGR01212_family_radical_SAM_protein BFL23_22790 API22666 4139808 4140044 - hypothetical_protein BFL23_22795 BFL23_22800 4139942 4140168 - hypothetical_protein no_locus_tag API22667 4140091 4144551 + glutamate_synthase_large_subunit BFL23_22805 API22668 4144564 4145982 + glutamate_synthase BFL23_22810 BFL23_22815 4146166 4147213 + hypothetical_protein no_locus_tag API22669 4147273 4147737 - hypothetical_protein BFL23_22820 API22670 4147734 4148609 - N-acetylmannosamine_kinase BFL23_22825 API22671 4148606 4149295 - N-acetylmannosamine-6-phosphate_2-epimerase BFL23_22830 API22672 4149343 4150833 - MFS_transporter BFL23_22835 API22673 4150942 4151835 - N-acetylneuraminate_lyase BFL23_22840 API22674 4151957 4152748 - transcriptional_regulator_NanR BFL23_22845 BFL23_22850 4153018 4153128 - transposase no_locus_tag BFL23_22855 4153128 4154484 + C4-dicarboxylate_transporter no_locus_tag API22675 4154527 4155024 - ClpXP_protease_specificity-enhancing_factor BFL23_22860 API22676 4155030 4155668 - stringent_starvation_protein_A sspA API22677 4156063 4156455 - 30S_ribosomal_protein_S9 BFL23_22870 API22678 4156471 4156899 - 50S_ribosomal_protein_L13 BFL23_22875 API22679 4157118 4158245 - cell_division_protein_ZapE BFL23_22880 API22680 4158439 4158837 + hypothetical_protein BFL23_22885 API22681 4158991 4160358 + serine_endoprotease_DegQ BFL23_22890 API22682 4160448 4161515 + outer_membrane-stress_sensor_serine endopeptidase DegS BFL23_22895 API22683 4161579 4162517 - malate_dehydrogenase BFL23_22900 API22684 4162952 4163422 + arginine_repressor BFL23_22905 API22685 4163787 4164050 + hypothetical_protein BFL23_22910 API22686 4164106 4164378 - hypothetical_protein BFL23_22915 API22687 4164470 4166437 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BFL23_22920 API22688 4166443 4167372 - efflux_transporter_periplasmic_adaptor_subunit BFL23_22925 API22689 4167380 4167583 - transporter BFL23_22930 API22690 4167766 4168695 + transcriptional_regulator BFL23_22935 API22691 4168829 4170274 - metalloprotease_TldD BFL23_22940 API22692 4170430 4174230 - TIGR02099_family_protein BFL23_22945 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 API22669 100 318 100.0 6e-109 PJR32596.1 API22670 100 570 100.0 0.0 PJR32597.1 API22671 100 461 100.0 2e-162 PJR32598.1 API22672 100 993 100.0 0.0 PJR32599.1 API22673 100 611 100.0 0.0 PJR32600.1 API22674 100 537 100.0 0.0 >> 66. CP018243_0 Source: Escherichia coli strain 350 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.5 Cumulative Blast bit score: 3490 Table of genes, locations, strands and annotations of subject cluster: API17003 4023455 4024021 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BFL21_21985 API17004 4024018 4024593 + LPS_export_ABC_transporter_periplasmic_protein LptC BFL21_21990 API17005 4024562 4025119 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA BFL21_21995 API17006 4025126 4025851 + LPS_export_ABC_transporter_ATP-binding_protein BFL21_22000 API17007 4025899 4027332 + RNA_polymerase_factor_sigma-54 BFL21_22005 API17008 4027355 4027642 + ribosomal_subunit_interface_protein BFL21_22010 API17009 4027760 4028251 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN BFL21_22015 API17010 4028297 4029151 + RNase_adaptor_protein_RapZ BFL21_22020 API17011 4029148 4029420 + phosphohistidinoprotein-hexose phosphotransferase BFL21_22025 API17012 4029634 4030266 + hypothetical_protein BFL21_22030 API17013 4030263 4030991 - monofunctional_biosynthetic_peptidoglycan transglycosylase BFL21_22035 API17014 4030988 4031641 - isoprenoid_biosynthesis_protein_ElbB BFL21_22040 API17015 4031871 4034207 - aerobic_respiration_two-component_sensor histidine kinase ArcB BFL21_22045 API18505 4034303 4035232 - TIGR01212_family_radical_SAM_protein BFL21_22050 API17016 4035623 4035859 - hypothetical_protein BFL21_22055 BFL21_22060 4035757 4035983 - hypothetical_protein no_locus_tag API17017 4035906 4040366 + glutamate_synthase_large_subunit BFL21_22065 API17018 4040379 4041797 + glutamate_synthase BFL21_22070 BFL21_22075 4041981 4043028 + hypothetical_protein no_locus_tag API17019 4043088 4043552 - hypothetical_protein BFL21_22080 API17020 4043549 4044424 - N-acetylmannosamine_kinase BFL21_22085 API17021 4044421 4045110 - N-acetylmannosamine-6-phosphate_2-epimerase BFL21_22090 API17022 4045158 4046648 - MFS_transporter BFL21_22095 API17023 4046757 4047650 - N-acetylneuraminate_lyase BFL21_22100 API17024 4047772 4048563 - transcriptional_regulator_NanR BFL21_22105 BFL21_22110 4048833 4048943 - transposase no_locus_tag BFL21_22115 4048943 4050299 + C4-dicarboxylate_transporter no_locus_tag API17025 4050342 4050839 - ClpXP_protease_specificity-enhancing_factor BFL21_22120 API17026 4050845 4051483 - stringent_starvation_protein_A sspA API17027 4051878 4052270 - 30S_ribosomal_protein_S9 BFL21_22130 API17028 4052286 4052714 - 50S_ribosomal_protein_L13 BFL21_22135 API17029 4052933 4054060 - cell_division_protein_ZapE BFL21_22140 API17030 4054254 4054652 + hypothetical_protein BFL21_22145 API17031 4054806 4056173 + serine_endoprotease_DegQ BFL21_22150 API17032 4056263 4057330 + outer_membrane-stress_sensor_serine endopeptidase DegS BFL21_22155 API17033 4057394 4058332 - malate_dehydrogenase BFL21_22160 API17034 4058767 4059237 + arginine_repressor BFL21_22165 API17035 4059602 4059865 + hypothetical_protein BFL21_22170 API17036 4059921 4060193 - hypothetical_protein BFL21_22175 API17037 4060285 4062252 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BFL21_22180 API17038 4062258 4063187 - efflux_transporter_periplasmic_adaptor_subunit BFL21_22185 API17039 4063195 4063398 - transporter BFL21_22190 API17040 4063581 4064510 + transcriptional_regulator BFL21_22195 API17041 4064644 4066089 - metalloprotease_TldD BFL21_22200 API17042 4066245 4070045 - TIGR02099_family_protein BFL21_22205 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 API17019 100 318 100.0 6e-109 PJR32596.1 API17020 100 570 100.0 0.0 PJR32597.1 API17021 100 461 100.0 2e-162 PJR32598.1 API17022 100 993 100.0 0.0 PJR32599.1 API17023 100 611 100.0 0.0 PJR32600.1 API17024 100 537 100.0 0.0 >> 67. CP018241_0 Source: Escherichia coli strain 319, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.5 Cumulative Blast bit score: 3490 Table of genes, locations, strands and annotations of subject cluster: API11402 4051195 4051761 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BFL24_22010 API11403 4051758 4052333 + LPS_export_ABC_transporter_periplasmic_protein LptC BFL24_22015 API11404 4052302 4052859 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA BFL24_22020 API11405 4052866 4053591 + LPS_export_ABC_transporter_ATP-binding_protein BFL24_22025 API11406 4053639 4055072 + RNA_polymerase_factor_sigma-54 BFL24_22030 API11407 4055095 4055382 + ribosomal_subunit_interface_protein BFL24_22035 API11408 4055500 4055991 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN BFL24_22040 API11409 4056037 4056891 + RNase_adaptor_protein_RapZ BFL24_22045 API11410 4056888 4057160 + phosphohistidinoprotein-hexose phosphotransferase BFL24_22050 API11411 4057374 4058006 + hypothetical_protein BFL24_22055 API11412 4058003 4058731 - monofunctional_biosynthetic_peptidoglycan transglycosylase BFL24_22060 API11413 4058728 4059381 - isoprenoid_biosynthesis_protein_ElbB BFL24_22065 API11414 4059611 4061947 - aerobic_respiration_two-component_sensor histidine kinase ArcB BFL24_22070 API12948 4062043 4062972 - TIGR01212_family_radical_SAM_protein BFL24_22075 API11415 4063363 4063599 - hypothetical_protein BFL24_22080 BFL24_22085 4063497 4063723 - hypothetical_protein no_locus_tag API11416 4063646 4068106 + glutamate_synthase_large_subunit BFL24_22090 API11417 4068119 4069537 + glutamate_synthase BFL24_22095 BFL24_22100 4069721 4070768 + hypothetical_protein no_locus_tag API11418 4070828 4071292 - hypothetical_protein BFL24_22105 API11419 4071289 4072164 - N-acetylmannosamine_kinase BFL24_22110 API11420 4072161 4072850 - N-acetylmannosamine-6-phosphate_2-epimerase BFL24_22115 API11421 4072898 4074388 - MFS_transporter BFL24_22120 API11422 4074497 4075390 - N-acetylneuraminate_lyase BFL24_22125 API11423 4075512 4076303 - transcriptional_regulator_NanR BFL24_22130 BFL24_22135 4076573 4076683 - transposase no_locus_tag BFL24_22140 4076683 4078039 + C4-dicarboxylate_transporter no_locus_tag API11424 4078082 4078579 - ClpXP_protease_specificity-enhancing_factor BFL24_22145 API11425 4078585 4079223 - stringent_starvation_protein_A sspA API11426 4079618 4080010 - 30S_ribosomal_protein_S9 BFL24_22155 API11427 4080026 4080454 - 50S_ribosomal_protein_L13 BFL24_22160 API11428 4080673 4081800 - cell_division_protein_ZapE BFL24_22165 API11429 4081994 4082392 + hypothetical_protein BFL24_22170 API11430 4082546 4083913 + serine_endoprotease_DegQ BFL24_22175 API11431 4084003 4085070 + outer_membrane-stress_sensor_serine endopeptidase DegS BFL24_22180 API11432 4085134 4086072 - malate_dehydrogenase BFL24_22185 API11433 4086507 4086977 + arginine_repressor BFL24_22190 API11434 4087342 4087605 + hypothetical_protein BFL24_22195 API11435 4087661 4087933 - hypothetical_protein BFL24_22200 API11436 4088025 4089992 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BFL24_22205 API11437 4089998 4090927 - efflux_transporter_periplasmic_adaptor_subunit BFL24_22210 API11438 4090935 4091138 - transporter BFL24_22215 API11439 4091321 4092250 + transcriptional_regulator BFL24_22220 API11440 4092384 4093829 - metalloprotease_TldD BFL24_22225 API11441 4093985 4097785 - TIGR02099_family_protein BFL24_22230 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 API11418 100 318 100.0 6e-109 PJR32596.1 API11419 100 570 100.0 0.0 PJR32597.1 API11420 100 461 100.0 2e-162 PJR32598.1 API11421 100 993 100.0 0.0 PJR32599.1 API11422 100 611 100.0 0.0 PJR32600.1 API11423 100 537 100.0 0.0 >> 68. CP040314_0 Source: Escherichia coli strain MA11 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.5 Cumulative Blast bit score: 3487 Table of genes, locations, strands and annotations of subject cluster: QFX10806 4826466 4827032 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QFX10807 4827029 4827604 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFX10808 4827573 4828130 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFX10809 4828137 4828862 + LPS_export_ABC_transporter_ATP-binding_protein lptB QFX10810 4828910 4830343 + RNA_polymerase_factor_sigma-54 rpoN QFX10811 4830366 4830653 + ribosome_hibernation_promoting_factor FEL10_24590 QFX10812 4830771 4831262 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFX10813 4831308 4832162 + RNase_adapter_RapZ rapZ QFX10814 4832159 4832431 + PTS_phosphocarrier_protein_NPr npr QFX10815 4832645 4833277 + PhoP_regulatory_network_protein_YrbL yrbL QFX10816 4833274 4834002 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QFX10817 4833999 4834652 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QFX10818 4834882 4837218 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QFX10819 4837314 4838243 - TIGR01212_family_radical_SAM_protein FEL10_24630 QFX11621 4838917 4843377 + glutamate_synthase_large_subunit gltB QFX10820 4843390 4844808 + glutamate_synthase_small_subunit FEL10_24640 FEL10_24645 4844992 4846040 + DUF1016_domain-containing_protein no_locus_tag QFX10821 4846100 4846564 - DUF386_domain-containing_protein FEL10_24650 QFX10822 4846561 4847436 - N-acetylmannosamine_kinase FEL10_24655 QFX10823 4847433 4848122 - N-acetylmannosamine-6-phosphate_2-epimerase FEL10_24660 QFX10824 4848170 4849660 - sialic_acid_transporter_NanT nanT QFX10825 4849769 4850662 - N-acetylneuraminate_lyase nanA QFX10826 4850784 4851575 - transcriptional_regulator_NanR nanR QFX10827 4851955 4853319 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QFX10828 4853354 4853851 - ClpXP_protease_specificity-enhancing_factor sspB QFX10829 4853857 4854495 - stringent_starvation_protein_A sspA QFX10830 4854751 4854972 + hypothetical_protein FEL10_24695 QFX10831 4854890 4855282 - 30S_ribosomal_protein_S9 rpsI QFX10832 4855298 4855726 - 50S_ribosomal_protein_L13 rplM QFX10833 4855945 4857072 - cell_division_protein_ZapE FEL10_24710 QFX10834 4857266 4857664 + DUF1043_family_protein FEL10_24715 QFX10835 4857818 4859185 + serine_endoprotease_DegQ degQ QFX10836 4859275 4860342 + serine_endoprotease_DegS FEL10_24725 QFX10837 4860406 4861344 - malate_dehydrogenase mdh QFX10838 4861779 4862249 + transcriptional_regulator_ArgR argR QFX10839 4862614 4862877 + peroxide/acid_stress_response_protein_YhcN yhcN QFX10840 4862933 4863205 - hypothetical_protein FEL10_24745 QFX10841 4863297 4865264 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFX10842 4865270 4866199 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFX10843 4866207 4866410 - DUF1656_domain-containing_protein FEL10_24760 QFX10844 4866593 4867522 + HTH-type_transcriptional_activator_AaeR aaeR QFX10845 4867656 4869101 - metalloprotease_TldD tldD QFX10846 4869257 4873057 - AsmA2_domain-containing_protein FEL10_24775 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QFX10821 100 318 100.0 6e-109 PJR32596.1 QFX10822 100 570 100.0 0.0 PJR32597.1 QFX10823 99 458 100.0 1e-161 PJR32598.1 QFX10824 100 993 100.0 0.0 PJR32599.1 QFX10825 100 611 100.0 0.0 PJR32600.1 QFX10826 100 537 100.0 0.0 >> 69. CP043752_0 Source: Escherichia coli strain CVM N56639 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.5 Cumulative Blast bit score: 3429 Table of genes, locations, strands and annotations of subject cluster: QEP82677 485659 487104 + metalloprotease_TldD tldD QEP82678 487232 488161 - HTH-type_transcriptional_activator_AaeR aaeR QEP82679 488344 488547 + DUF1656_domain-containing_protein F1L18_02405 QEP82680 488555 489487 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QEP82681 489493 491460 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QEP82682 491552 491824 + hypothetical_protein F1L18_02420 QEP82683 491880 492143 - peroxide/acid_stress_response_protein_YhcN yhcN QEP82684 492509 492979 - transcriptional_regulator_ArgR argR QEP82685 493414 494352 + malate_dehydrogenase mdh QEP82686 494414 495481 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QEP82687 495571 496938 - serine_endoprotease_DegQ degQ QEP82688 497092 497490 - DUF1043_family_protein F1L18_02450 QEP82689 497684 498811 + cell_division_protein_ZapE F1L18_02455 QEP82690 499030 499458 + 50S_ribosomal_protein_L13 rplM QEP82691 499474 499866 + 30S_ribosomal_protein_S9 rpsI QEP82692 499784 500005 - hypothetical_protein F1L18_02470 QEP82693 500261 500899 + stringent_starvation_protein_A sspA QEP82694 500905 501402 + ClpXP_protease_specificity-enhancing_factor sspB QEP82695 503192 503983 + transcriptional_regulator_NanR nanR QEP82696 504105 504998 + N-acetylneuraminate_lyase nanA QEP82697 505107 506597 + sialic_acid_transporter_NanT nanT QEP82698 506645 507334 + N-acetylmannosamine-6-phosphate_2-epimerase F1L18_02505 QEP86574 507331 508206 + N-acetylmannosamine_kinase F1L18_02510 QEP82699 508203 508667 + DUF386_domain-containing_protein F1L18_02515 QEP82700 508727 509839 - DUF1016_domain-containing_protein F1L18_02520 QEP82701 510023 511441 - glutamate_synthase F1L18_02525 QEP86575 511454 515914 - glutamate_synthase_large_subunit gltB QEP82702 516589 517518 + TIGR01212_family_radical_SAM_protein F1L18_02535 QEP82703 517614 519950 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QEP82704 520180 520833 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QEP82705 520830 521558 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QEP82706 521555 522187 - PhoP_regulatory_network_protein_YrbL yrbL QEP82707 522401 522673 - PTS_phosphocarrier_protein_NPr npr QEP82708 522670 523524 - RNase_adapter_RapZ rapZ QEP82709 523570 524061 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QEP82710 524179 524466 - ribosome_hibernation_promoting_factor F1L18_02575 QEP82711 524489 525922 - RNA_polymerase_factor_sigma-54 rpoN QEP82712 525970 526695 - LPS_export_ABC_transporter_ATP-binding_protein lptB QEP82713 526702 527259 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QEP82714 527228 527803 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QEP82715 527800 528366 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QEP82716 528387 529373 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QEP82699 98 311 100.0 7e-106 PJR32596.1 QEP86574 97 526 100.0 0.0 PJR32597.1 QEP82698 99 456 100.0 1e-160 PJR32598.1 QEP82697 99 990 100.0 0.0 PJR32599.1 QEP82696 100 611 100.0 0.0 PJR32600.1 QEP82695 99 536 100.0 0.0 >> 70. CP034843_0 Source: Escherichia coli strain L103-2 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.5 Cumulative Blast bit score: 3413 Table of genes, locations, strands and annotations of subject cluster: QAA00737 507861 509306 + metalloprotease_TldD tldD QAA00738 509440 510369 - HTH-type_transcriptional_activator_AaeR aaeR QAA00739 510552 510755 + DUF1656_domain-containing_protein EO769_02475 QAA00740 510763 511695 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QAA00741 511701 513668 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QAA00742 513760 514032 + hypothetical_protein EO769_02490 QAA00743 514088 514351 - peroxide/acid_stress_response_protein_YhcN EO769_02495 QAA00744 514716 515186 - transcriptional_regulator_ArgR argR QAA00745 515621 516559 + malate_dehydrogenase EO769_02505 QAA00746 516622 517689 - serine_endoprotease_DegS degS QAA00747 517779 519146 - serine_endoprotease_DegQ degQ QAA00748 519300 519698 - DUF1043_family_protein EO769_02520 QAA00749 519892 521019 + cell_division_protein_ZapE zapE QAA00750 521238 521666 + 50S_ribosomal_protein_L13 EO769_02530 QAA00751 521682 522074 + 30S_ribosomal_protein_S9 EO769_02535 QAA00752 522469 523107 + stringent_starvation_protein_A EO769_02540 QAA00753 523113 523610 + ClpXP_protease_specificity-enhancing_factor EO769_02545 QAA00754 523652 525019 - C4-dicarboxylate_transporter_DcuC dcuC QAA00755 525399 526190 + transcriptional_regulator_NanR EO769_02555 QAA00756 526312 527205 + N-acetylneuraminate_lyase nanA QAA00757 527315 528805 + MFS_transporter EO769_02565 QAA00758 528853 529542 + N-acetylmannosamine-6-phosphate_2-epimerase EO769_02570 QAA00759 529539 530414 + N-acetylmannosamine_kinase EO769_02575 QAA00760 530411 530875 + YhcH/YjgK/YiaL_family_protein EO769_02580 QAA00761 530951 531256 - transposase EO769_02585 QAA00762 531273 531752 - DUF1016_family_protein EO769_02590 QAA00763 531936 533354 - glutamate_synthase_small_subunit EO769_02595 QAA00764 533367 537827 - glutamate_synthase_subunit_alpha EO769_02600 QAA00765 538502 539431 + TIGR01212_family_radical_SAM_protein EO769_02605 QAA00766 539527 541863 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QAA00767 542093 542746 + isoprenoid_biosynthesis_protein_ElbB elbB QAA00768 542743 543471 + monofunctional_biosynthetic_peptidoglycan transglycosylase EO769_02620 QAA00769 543468 544100 - PhoP_regulatory_network_protein_YrbL yrbL QAA00770 544314 544586 - PTS_phosphocarrier_protein_NPr EO769_02630 QAA00771 544583 545437 - RNase_adapter_RapZ rapZ QAA00772 545483 545974 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QAA00773 546092 546379 - ribosome_hibernation_promoting_factor EO769_02645 QAA00774 546402 547835 - RNA_polymerase_factor_sigma-54 EO769_02650 QAA00775 547883 548608 - lipopolysaccharide_ABC_transporter_ATP-binding protein EO769_02655 QAA00776 548615 549172 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QAA00777 549141 549716 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QAA00778 549713 550279 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QAA00779 550300 551286 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QAA00760 98 314 100.0 3e-107 PJR32596.1 QAA00759 97 507 100.0 1e-178 PJR32597.1 QAA00758 99 456 100.0 1e-160 PJR32598.1 QAA00757 99 990 100.0 0.0 PJR32599.1 QAA00756 100 611 100.0 0.0 PJR32600.1 QAA00755 99 536 100.0 0.0 >> 71. LR217818_0 Source: Escherichia coli strain NCTC86 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3802 Table of genes, locations, strands and annotations of subject cluster: VFQ33855 521994 523439 + TldD_protein tldD VFQ33856 523573 524289 - LysR_family_transcriptional_regulator aaeR_1 VFQ33857 524356 524502 - LysR_family_transcriptional_regulator aaeR_2 VFQ33858 524685 524888 + protein_AaeX aaeX VFQ33859 524896 525828 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VFQ33860 525834 527801 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VFQ33861 527893 528165 + barnase_inhibitor yhcO VFQ33862 528276 529604 + transposase_insG SAMEA3446340_00504 VFQ33863 529660 529923 - protein_YcfR ycfR VFQ33864 530288 530758 - arginine_repressor argR VFQ33865 531193 532131 + malate_dehydrogenase mdh_1 VFQ33866 532194 533261 - protease degS VFQ33867 533351 534718 - serine_endoprotease degQ VFQ33868 534872 535270 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VFQ33869 535464 536591 + putative_ATP/GTP-binding_protein yhcM VFQ33870 536810 537238 + 50S_ribosomal_protein_L13 rplM VFQ33871 537254 537646 + 30S_ribosomal_protein_S9 rpsI VFQ33872 538041 538679 + stringent_starvation_protein_A sspA VFQ33873 538685 539182 + stringent_starvation_protein_B sspB VFQ33874 539225 540592 - C4-dicarboxylate_transporter dcuD VFQ33875 540972 541763 + GntR_family_transcriptional_regulator nanR VFQ33876 541885 542778 + N-acetylneuraminate_lyase nanA VFQ33877 542887 544377 + sialic_acid_transporter nanT VFQ33878 544425 545114 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VFQ33879 545111 545986 + putative_transcriptional_regulator nanK VFQ33880 545983 546447 + beta-galactosidase yhcH VFQ33881 546507 547634 - protein yhcG VFQ33882 547819 548535 - putative_transcriptional_regulator yhcF VFQ33883 548532 549077 - Uncharacterised_protein SAMEA3446340_00525 VFQ33884 549074 551455 - putative_outer_membrane_protein yhcD VFQ33885 551476 552150 - putative_periplasmic_chaperone_protein yhcA VFQ33886 552156 552260 - Uncharacterised_protein SAMEA3446340_00528 VFQ33887 552322 553086 - periplasmic_protein gltF VFQ33888 553646 555064 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VFQ33889 555077 559630 - glutamate_synthase_subunit_alpha gltB VFQ33890 560212 561141 + putative_radical_SAM_protein SAMEA3446340_00532 VFQ33891 561237 563186 + aerobic_respiration_control_protein arcB_1 VFQ33892 563183 563563 + aerobic_respiration_control_protein arcB_2 VFQ33893 563793 564446 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VFQ33894 564443 565171 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VFQ33895 565168 565800 - protein yrbL VFQ33896 566014 566286 - phosphocarrier_protein ptsO VFQ33897 566283 567137 - putative_ATPase yhbJ VFQ33898 567183 567674 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VFQ33881 90 684 107.449856734 0.0 PJR32596.1 VFQ33879 96 525 100.0 0.0 PJR32597.1 VFQ33878 99 456 100.0 1e-160 PJR32598.1 VFQ33877 99 990 100.0 0.0 PJR32599.1 VFQ33876 100 611 100.0 0.0 PJR32600.1 VFQ33875 99 536 100.0 0.0 >> 72. CP049343_0 Source: Escherichia coli strain UMB200201_11 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3801 Table of genes, locations, strands and annotations of subject cluster: QIH49713 477849 479294 + protein_TldD FM734_000452 QIH49714 479422 480351 - HTH-type_transcriptional_activator_AaeR FM734_000453 QIH49715 480534 480737 + protein_AaeX FM734_000454 QIH49716 480745 481677 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA FM734_000455 QIH49717 481683 483650 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB FM734_000456 QIH49718 483742 484014 + barnase_inhibitor FM734_000457 QIH49719 484070 484333 - hypothetical_protein FM734_000458 QIH49720 484698 485168 - arginine_repressor FM734_000459 QIH49721 485603 486541 + malate_dehydrogenase FM734_000460 QIH49722 486604 487671 - serine_endoprotease_DegS FM734_000461 QIH49723 487761 489128 - periplasmic_pH-dependent_serine_endoprotease DegQ FM734_000462 QIH49724 489282 489680 - inner_membrane_protein_YhcB FM734_000463 QIH49725 489874 491001 + cell_division_protein_ZapE FM734_000464 QIH49726 491220 491648 + 50S_ribosomal_protein_L13 FM734_000465 QIH49727 491664 492056 + 30S_ribosomal_protein_S9 FM734_000466 QIH49728 492451 493089 + stringent_starvation_protein_A FM734_000467 QIH49729 493095 493592 + stringent_starvation_protein_B FM734_000468 QIH49730 493635 495002 - DcuC_family_C4-dicarboxylate_transporter FM734_000469 QIH49731 495382 496173 + transcriptional_regulator_NanR FM734_000470 QIH49732 496295 497188 + N-acetylneuraminate_lyase FM734_000471 QIH49733 497297 498787 + sialic_acid_transporter FM734_000472 QIH49734 498835 499524 + N-acetylmannosamine-6-P_epimerase FM734_000473 QIH49735 499521 500396 + N-acetylmannosamine_kinase FM734_000474 QIH49736 500393 500857 + hypothetical_protein FM734_000475 QIH49737 500917 502044 - hypothetical_protein FM734_000476 QIH49738 502228 503646 - glutamate_synthase_[NADPH]_small_chain FM734_000477 QIH49739 503659 508212 - glutamate_synthase_[NADPH]_large_chain FM734_000478 QIH49740 508794 509723 + TIGR01212_family_radical_SAM_protein FM734_000479 QIH49741 509819 512155 + aerobic_respiration_control_sensor_protein_ArcB FM734_000480 QIH49742 512385 513038 + enhancing_lycopene_biosynthesis_protein_2 FM734_000481 QIH49743 513035 513763 + monofunctional_biosynthetic_peptidoglycan transglycosylase FM734_000482 QIH49744 513760 514392 - hypothetical_protein FM734_000483 QIH49745 514606 514878 - phosphocarrier_protein_NPr FM734_000484 QIH49746 514875 515729 - UPF0042_nucleotide-binding_protein_YhbJ FM734_000485 QIH49747 515775 516266 - nitrogen_regulatory_protein FM734_000486 QIH49748 516384 516671 - ribosome_hibernation_promoting_factor FM734_000487 QIH49749 516694 518127 - RNA_polymerase_sigma-54_factor FM734_000488 QIH49750 518175 518900 - lipopolysaccharide_export_system_ATP-binding protein LptB FM734_000489 QIH49751 518907 519464 - lipopolysaccharide_export_system_protein_LptA FM734_000490 QIH49752 519433 520008 - lipopolysaccharide_export_system_protein_LptC FM734_000491 QIH49753 520005 520571 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC FM734_000492 QIH49754 520592 521578 - arabinose_5-phosphate_isomerase_KdsD FM734_000493 QIH49755 521592 522569 - inner_membrane_protein_YrbG FM734_000494 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QIH49737 91 699 107.449856734 0.0 PJR32596.1 QIH49735 97 509 100.0 2e-179 PJR32597.1 QIH49734 99 456 100.0 1e-160 PJR32598.1 QIH49733 99 990 100.0 0.0 PJR32599.1 QIH49732 100 611 100.0 0.0 PJR32600.1 QIH49731 99 536 100.0 0.0 >> 73. CP010238_0 Source: Escherichia coli strain S50, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3801 Table of genes, locations, strands and annotations of subject cluster: APL79500 1363934 1364920 + D-arabinose_5-phosphate_isomerase RG72_06815 APL79501 1364941 1365507 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG72_06820 APL79502 1365504 1366079 + lipopolysaccharide_transporter RG72_06825 APL79503 1366048 1366605 + lipopolysaccharide_transporter RG72_06830 APL79504 1366612 1367337 + sugar_ABC_transporter_ATP-binding_protein RG72_06835 APL79505 1367385 1368818 + RNA_polymerase_factor_sigma-54 RG72_06840 APL79506 1368841 1369128 + ribosome_hibernation_promoting_factor_HPF RG72_06845 APL79507 1369246 1369737 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG72_06850 APL79508 1369783 1370637 + glmZ(sRNA)-inactivating_NTPase RG72_06855 APL79509 1370634 1370906 + phosphohistidinoprotein-hexose phosphotransferase RG72_06860 APL79510 1371120 1371752 + hypothetical_protein RG72_06865 APL79511 1371749 1372477 - peptidoglycan_transglycosylase mtgA APL79512 1372474 1373127 - isoprenoid_biosynthesis_protein RG72_06875 APL79513 1373357 1375693 - aerobic_respiration_control_sensor_protein_ArcB RG72_06880 APL82727 1375789 1376718 - hypothetical_protein RG72_06885 APL82728 1377393 1381853 + glutamate_synthase gltB APL79514 1381866 1383284 + glutamate_synthase RG72_06895 APL79515 1383468 1384595 + hypothetical_protein RG72_06900 APL79516 1384655 1385119 - hypothetical_protein RG72_06905 APL79517 1385116 1385991 - N-acetylmannosamine_kinase RG72_06910 APL79518 1385988 1386677 - N-acetylmannosamine-6-phosphate_2-epimerase RG72_06915 APL79519 1386725 1388215 - sialic_acid_transporter RG72_06920 APL79520 1388324 1389217 - N-acetylneuraminate_lyase RG72_06925 APL79521 1389339 1390130 - transcriptional_regulator_NanR RG72_06930 APL79522 1390510 1391877 + C4-dicarboxylate_transporter RG72_06935 APL79523 1391920 1392417 - Clp_protease_ClpP RG72_06940 APL79524 1392423 1393061 - stringent_starvation_protein_A sspA APL79525 1393456 1393848 - 30S_ribosomal_protein_S9 RG72_06950 APL79526 1393864 1394292 - 50S_ribosomal_protein_L13 RG72_06955 APL79527 1394511 1395638 - hypothetical_protein RG72_06960 APL79528 1395832 1396230 + hypothetical_protein RG72_06965 APL79529 1396384 1397751 + serine_endoprotease_DegQ RG72_06970 APL79530 1397841 1398908 + serine_endoprotease RG72_06975 APL79531 1398971 1399909 - malate_dehydrogenase RG72_06980 APL79532 1400344 1400814 + arginine_repressor RG72_06985 APL79533 1401179 1401442 + membrane_protein RG72_06990 APL79534 1401498 1401770 - hypothetical_protein RG72_06995 APL79535 1401862 1403829 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG72_07000 APL79536 1403835 1404767 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG72_07005 APL82729 1404775 1404978 - transporter RG72_07010 APL79537 1405161 1406090 + transcriptional_regulator RG72_07015 APL79538 1406218 1407663 - protease_TldD tldD APL79539 1407819 1411619 - hypothetical_protein RG72_07025 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APL79515 91 699 107.449856734 0.0 PJR32596.1 APL79517 97 509 100.0 2e-179 PJR32597.1 APL79518 99 456 100.0 1e-160 PJR32598.1 APL79519 99 990 100.0 0.0 PJR32599.1 APL79520 100 611 100.0 0.0 PJR32600.1 APL79521 99 536 100.0 0.0 >> 74. CP023200_0 Source: Escherichia coli strain 646 chromosome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3800 Table of genes, locations, strands and annotations of subject cluster: ASZ43180 3987534 3988520 + arabinose_5-phosphate_isomerase_KdsD CLD27_18370 ASZ43181 3988541 3989107 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC CLD27_18375 ASZ43182 3989104 3989679 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC ASZ43183 3989648 3990205 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA CLD27_18385 ASZ43184 3990212 3990937 + ABC_transporter_ATP-binding_protein lptB ASZ43185 3990985 3992418 + RNA_polymerase_sigma-54_factor CLD27_18395 ASZ43186 3992441 3992728 + ribosome_hibernation_promoting_factor CLD27_18400 ASZ43187 3992846 3993337 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN CLD27_18405 ASZ43188 3993383 3994237 + RNase_adaptor_protein_RapZ CLD27_18410 ASZ43189 3994234 3994506 + phosphocarrier_protein_NPr CLD27_18415 ASZ43190 3994719 3995351 + protein_YrbL CLD27_18420 ASZ43191 3995348 3996076 - monofunctional_biosynthetic_peptidoglycan transglycosylase CLD27_18425 ASZ43192 3996073 3996726 - glutamine_amidotransferase CLD27_18430 ASZ43193 3996956 3999292 - hybrid_sensor_histidine_kinase/response regulator CLD27_18435 ASZ44531 3999388 4000317 - TIGR01212_family_radical_SAM_protein CLD27_18440 ASZ43194 4000709 4000945 - hypothetical_protein CLD27_18445 CLD27_18450 4000843 4001069 - hypothetical_protein no_locus_tag ASZ43195 4000992 4005452 + glutamate_synthase_large_subunit CLD27_18455 ASZ43196 4005465 4006883 + glutamate_synthase CLD27_18460 ASZ43197 4007067 4008194 + hypothetical_protein CLD27_18465 ASZ43198 4008254 4008718 - YhcH/YjgK/YiaL_family_protein CLD27_18470 ASZ43199 4008715 4009590 - N-acetylmannosamine_kinase CLD27_18475 ASZ43200 4009587 4010276 - N-acetylmannosamine-6-phosphate_2-epimerase CLD27_18480 ASZ43201 4010324 4011814 - MFS_transporter CLD27_18485 ASZ43202 4011924 4012817 - N-acetylneuraminate_lyase nanA ASZ43203 4012939 4013730 - transcriptional_regulator_NanR CLD27_18495 CLD27_18500 4014000 4014110 - transposase no_locus_tag ASZ43204 4014110 4015477 + C4-dicarboxylate_transporter CLD27_18505 ASZ43205 4015520 4016017 - stringent_starvation_protein_B CLD27_18510 ASZ43206 4016023 4016661 - stringent_starvation_protein_A CLD27_18515 ASZ43207 4016603 4016812 + hypothetical_protein CLD27_18520 ASZ44532 4016764 4016943 - hypothetical_protein CLD27_18525 ASZ43208 4016917 4017138 + hypothetical_protein CLD27_18530 ASZ43209 4017056 4017448 - 30S_ribosomal_protein_S9 CLD27_18535 ASZ43210 4017464 4017892 - 50S_ribosomal_protein_L13 CLD27_18540 ASZ43211 4018111 4019238 - cell_division_protein_ZapE CLD27_18545 ASZ43212 4019432 4019830 + hypothetical_protein CLD27_18550 ASZ43213 4019984 4021351 + periplasmic_pH-dependent_serine_endoprotease DegQ CLD27_18555 ASZ43214 4021441 4022508 + outer_membrane-stress_sensor_serine endopeptidase DegS CLD27_18560 ASZ43215 4022571 4023509 - malate_dehydrogenase CLD27_18565 ASZ43216 4023944 4024414 + arginine_repressor CLD27_18570 ASZ43217 4024779 4025042 + hypothetical_protein CLD27_18575 ASZ43218 4025098 4025370 - hypothetical_protein CLD27_18580 ASZ43219 4025462 4027429 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CLD27_18585 ASZ43220 4027435 4028367 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CLD27_18590 ASZ43221 4028375 4028578 - protein_AaeX CLD27_18595 ASZ43222 4028761 4029690 + HTH-type_transcriptional_activator_AaeR CLD27_18600 ASZ43223 4029818 4031263 - metalloprotease_TldD CLD27_18605 ASZ43224 4031419 4035219 - TIGR02099_family_protein CLD27_18610 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ASZ43197 91 698 107.449856734 0.0 PJR32596.1 ASZ43199 97 509 100.0 1e-179 PJR32597.1 ASZ43200 99 456 100.0 1e-160 PJR32598.1 ASZ43201 99 990 100.0 0.0 PJR32599.1 ASZ43202 100 611 100.0 0.0 PJR32600.1 ASZ43203 99 536 100.0 0.0 >> 75. CP035331_0 Source: Escherichia coli strain BR25-DEC chromosome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3799 Table of genes, locations, strands and annotations of subject cluster: QAU85870 1027017 1028462 + metalloprotease_TldD tldD QAU85871 1028590 1029519 - HTH-type_transcriptional_activator_AaeR aaeR QAU85872 1029702 1029905 + DUF1656_domain-containing_protein ETE53_05100 QAU85873 1029913 1030845 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QAU85874 1030851 1032818 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QAU85875 1032910 1033182 + hypothetical_protein ETE53_05115 QAU85876 1033238 1033501 - peroxide/acid_stress_response_protein_YhcN yhcN QAU85877 1033866 1034336 - transcriptional_regulator_ArgR argR QAU85878 1034771 1035709 + malate_dehydrogenase ETE53_05130 QAU85879 1035771 1036838 - serine_endoprotease_DegS degS QAU85880 1036928 1038295 - serine_endoprotease_DegQ degQ QAU85881 1038449 1038847 - DUF1043_family_protein ETE53_05145 QAU85882 1039041 1040168 + cell_division_protein_ZapE zapE QAU85883 1040387 1040815 + 50S_ribosomal_protein_L13 ETE53_05155 QAU85884 1040831 1041223 + 30S_ribosomal_protein_S9 ETE53_05160 QAU85885 1041141 1041362 - hypothetical_protein ETE53_05165 QAU85886 1041618 1042256 + stringent_starvation_protein_A ETE53_05170 QAU85887 1042262 1042759 + ClpXP_protease_specificity-enhancing_factor sspB QAU85888 1042802 1044169 - C4-dicarboxylate_transporter_DcuC dcuC QAU85889 1044549 1045340 + transcriptional_regulator_NanR ETE53_05185 QAU85890 1045462 1046355 + N-acetylneuraminate_lyase nanA QAU85891 1046465 1047955 + MFS_transporter ETE53_05195 QAU85892 1048003 1048692 + N-acetylmannosamine-6-phosphate_2-epimerase ETE53_05200 QAU89278 1048689 1049564 + N-acetylmannosamine_kinase ETE53_05205 QAU85893 1049561 1050025 + YhcH/YjgK/YiaL_family_protein ETE53_05210 QAU85894 1050085 1051212 - DUF1016_domain-containing_protein ETE53_05215 QAU85895 1051396 1052814 - glutamate_synthase_small_subunit ETE53_05220 QAU85896 1052827 1057287 - glutamate_synthase_large_subunit gltB QAU85897 1057962 1058891 + TIGR01212_family_radical_SAM_protein ETE53_05230 QAU85898 1058987 1061323 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QAU85899 1061553 1062206 + isoprenoid_biosynthesis_protein_ElbB elbB QAU85900 1062203 1062931 + monofunctional_biosynthetic_peptidoglycan transglycosylase ETE53_05245 QAU85901 1062928 1063560 - PhoP_regulatory_network_protein_YrbL yrbL QAU85902 1063774 1064046 - PTS_phosphocarrier_protein_NPr ETE53_05255 QAU85903 1064043 1064897 - RNase_adapter_RapZ rapZ QAU85904 1064943 1065434 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QAU85905 1065552 1065839 - ribosome_hibernation_promoting_factor ETE53_05270 QAU85906 1065862 1067295 - RNA_polymerase_factor_sigma-54 ETE53_05275 QAU85907 1067343 1068068 - lipopolysaccharide_ABC_transporter_ATP-binding protein ETE53_05280 QAU85908 1068075 1068632 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QAU85909 1068601 1069176 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QAU85910 1069173 1069739 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QAU85911 1069760 1070746 - arabinose-5-phosphate_isomerase_KdsD kdsD QAU85912 1070760 1071737 - calcium/sodium_antiporter ETE53_05305 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QAU85894 91 697 107.449856734 0.0 PJR32596.1 QAU89278 97 509 100.0 2e-179 PJR32597.1 QAU85892 99 456 100.0 1e-160 PJR32598.1 QAU85891 99 990 100.0 0.0 PJR32599.1 QAU85890 100 611 100.0 0.0 PJR32600.1 QAU85889 99 536 100.0 0.0 >> 76. LR134296_0 Source: Escherichia coli strain NCTC9041 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3784 Table of genes, locations, strands and annotations of subject cluster: VEE29040 507292 508737 + TldD_protein tldD VEE29043 508871 509800 - LysR_family_transcriptional_regulator aaeR VEE29046 509983 510186 + protein_AaeX aaeX VEE29049 510194 511126 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VEE29052 511132 513099 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VEE29055 513191 513463 + barnase_inhibitor yhcO VEE29059 513519 513782 - protein_YcfR ycfR VEE29062 514147 514617 - arginine_repressor argR VEE29065 515052 515990 + malate_dehydrogenase mdh VEE29068 516053 517120 - protease degS VEE29071 517210 518577 - serine_endoprotease degQ VEE29074 518731 519129 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VEE29077 519323 520450 + putative_ATP/GTP-binding_protein yhcM VEE29080 520669 521097 + 50S_ribosomal_protein_L13 rplM VEE29083 521113 521505 + 30S_ribosomal_protein_S9 rpsI VEE29086 521900 522538 + stringent_starvation_protein_A sspA VEE29088 522544 523041 + stringent_starvation_protein_B sspB VEE29091 523084 524451 - C4-dicarboxylate_transporter dcuD VEE29094 524831 525622 + GntR_family_transcriptional_regulator nanR VEE29097 525744 526637 + N-acetylneuraminate_lyase nanA VEE29100 526746 528236 + sialic_acid_transporter nanT VEE29103 528284 528973 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VEE29106 528970 529845 + putative_transcriptional_regulator nanK VEE29109 529842 530306 + beta-galactosidase yhcH VEE29112 530366 531493 - protein yhcG VEE29115 531678 532394 - putative_transcriptional_regulator yhcF VEE29118 532391 532936 - Uncharacterised_protein NCTC9041_00514 VEE29121 532933 535314 - putative_outer_membrane_protein yhcD VEE29124 535335 536009 - putative_periplasmic_chaperone_protein yhcA VEE29127 536015 536119 - Uncharacterised_protein NCTC9041_00517 VEE29130 536181 536945 - periplasmic_protein gltF VEE29133 537505 538923 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VEE29136 538936 543489 - glutamate_synthase_subunit_alpha gltB VEE29138 544071 545000 + putative_radical_SAM_protein NCTC9041_00521 VEE29141 545096 547432 + aerobic_respiration_control_protein arcB VEE29144 547662 548315 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VEE29147 548312 549040 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VEE29150 549037 549669 - protein yrbL VEE29154 549883 550155 - phosphocarrier_protein ptsO VEE29157 550152 551006 - putative_ATPase yhbJ VEE29160 551052 551543 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VEE29112 90 684 107.449856734 0.0 PJR32596.1 VEE29106 97 507 100.0 1e-178 PJR32597.1 VEE29103 99 456 100.0 1e-160 PJR32598.1 VEE29100 99 990 100.0 0.0 PJR32599.1 VEE29097 100 611 100.0 0.0 PJR32600.1 VEE29094 99 536 100.0 0.0 >> 77. LR134295_0 Source: Escherichia coli strain NCTC9080 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3784 Table of genes, locations, strands and annotations of subject cluster: VEE26316 490723 492168 + TldD_protein tldD VEE26317 492302 493231 - LysR_family_transcriptional_regulator aaeR VEE26318 493414 493617 + protein_AaeX aaeX VEE26319 493625 494557 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VEE26320 494563 496530 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VEE26321 496622 496894 + barnase_inhibitor yhcO VEE26322 496950 497264 - protein_YcfR ycfR VEE26323 497578 498048 - arginine_repressor argR VEE26324 498483 499421 + malate_dehydrogenase mdh VEE26325 499484 500551 - protease degS VEE26326 500641 502008 - serine_endoprotease degQ VEE26327 502162 502560 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VEE26328 502754 503881 + putative_ATP/GTP-binding_protein yhcM VEE26329 504100 504528 + 50S_ribosomal_protein_L13 rplM VEE26330 504544 504936 + 30S_ribosomal_protein_S9 rpsI VEE26331 505331 505969 + stringent_starvation_protein_A sspA VEE26332 505975 506472 + stringent_starvation_protein_B sspB VEE26333 506515 507882 - C4-dicarboxylate_transporter dcuD VEE26334 508262 509053 + GntR_family_transcriptional_regulator nanR VEE26335 509175 510068 + N-acetylneuraminate_lyase nanA VEE26336 510178 511668 + sialic_acid_transporter nanT VEE26337 511716 512405 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VEE26338 512402 513277 + putative_transcriptional_regulator nanK VEE26339 513274 513738 + beta-galactosidase yhcH VEE26340 513798 514925 - protein yhcG VEE26341 515110 515826 - putative_transcriptional_regulator yhcF VEE26342 515823 516368 - Uncharacterised_protein NCTC9080_00498 VEE26343 516365 518746 - putative_outer_membrane_protein yhcD VEE26344 518767 519441 - putative_periplasmic_chaperone_protein yhcA VEE26345 519447 519551 - Uncharacterised_protein NCTC9080_00501 VEE26346 519613 520377 - periplasmic_protein gltF VEE26347 520937 522355 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VEE26348 522368 526921 - glutamate_synthase_subunit_alpha gltB VEE26349 527503 528432 + putative_radical_SAM_protein NCTC9080_00505 VEE26350 528528 530864 + aerobic_respiration_control_protein arcB VEE26351 531094 531747 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VEE26352 531744 532472 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VEE26353 532469 533101 - protein yrbL VEE26354 533315 533587 - phosphocarrier_protein ptsO VEE26355 533584 534438 - putative_ATPase yhbJ VEE26356 534484 534975 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VEE26340 90 684 107.449856734 0.0 PJR32596.1 VEE26338 97 507 100.0 1e-178 PJR32597.1 VEE26337 99 456 100.0 1e-160 PJR32598.1 VEE26336 99 990 100.0 0.0 PJR32599.1 VEE26335 100 611 100.0 0.0 PJR32600.1 VEE26334 99 536 100.0 0.0 >> 78. LR134240_0 Source: Escherichia coli strain NCTC9107 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3784 Table of genes, locations, strands and annotations of subject cluster: VED24367 537023 538468 + TldD_protein tldD VED24368 538602 539531 - LysR_family_transcriptional_regulator aaeR VED24369 539714 539917 + protein_AaeX aaeX VED24370 539925 540857 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VED24371 540863 542830 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VED24372 542922 543194 + barnase_inhibitor yhcO VED24373 543250 543513 - protein_YcfR ycfR VED24374 543878 544348 - arginine_repressor argR VED24375 544783 545721 + malate_dehydrogenase mdh VED24376 545784 546851 - protease degS VED24377 546941 548308 - serine_endoprotease degQ VED24378 548462 548860 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VED24379 549054 550181 + putative_ATP/GTP-binding_protein yhcM VED24380 550400 550828 + 50S_ribosomal_protein_L13 rplM VED24381 550844 551236 + 30S_ribosomal_protein_S9 rpsI VED24382 551631 552269 + stringent_starvation_protein_A sspA VED24383 552275 552772 + stringent_starvation_protein_B sspB VED24384 552815 554182 - C4-dicarboxylate_transporter dcuD VED24385 554562 555353 + GntR_family_transcriptional_regulator nanR VED24386 555475 556368 + N-acetylneuraminate_lyase nanA VED24387 556477 557967 + sialic_acid_transporter nanT VED24388 558015 558704 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VED24389 558701 559576 + putative_transcriptional_regulator nanK VED24390 559573 560037 + beta-galactosidase yhcH VED24391 560097 561224 - protein yhcG VED24392 561298 562203 - IS2_element_protein insD_1 VED24393 562161 562526 - transposase NCTC9107_00555 VED24394 562745 563461 - putative_transcriptional_regulator yhcF VED24395 563458 564003 - Uncharacterised_protein NCTC9107_00557 VED24396 564000 566381 - putative_outer_membrane_protein yhcD VED24397 566402 567076 - putative_periplasmic_chaperone_protein yhcA VED24398 567248 568012 - periplasmic_protein gltF VED24399 568572 569990 - glutamate_synthase_(NADPH)_small_subunit gltD VED24400 570003 574556 - glutamate_synthase_subunit_alpha gltB VED24401 575138 576067 + putative_radical_SAM_protein NCTC9107_00563 VED24402 576163 578499 + aerobic_respiration_control_protein arcB VED24403 578729 579382 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VED24404 579379 580107 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VED24405 580104 580736 - protein yrbL VED24406 580950 581222 - phosphocarrier_protein ptsO VED24407 581219 582073 - putative_ATPase yhbJ Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VED24391 90 684 107.449856734 0.0 PJR32596.1 VED24389 97 507 100.0 1e-178 PJR32597.1 VED24388 99 456 100.0 1e-160 PJR32598.1 VED24387 99 990 100.0 0.0 PJR32599.1 VED24386 100 611 100.0 0.0 PJR32600.1 VED24385 99 536 100.0 0.0 >> 79. LR134239_0 Source: Escherichia coli strain NCTC9100 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3784 Table of genes, locations, strands and annotations of subject cluster: VED16962 486183 487628 + TldD_protein tldD VED16964 487762 488691 - LysR_family_transcriptional_regulator aaeR VED16967 488874 489077 + protein_AaeX aaeX VED16969 489085 490017 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VED16971 490023 491990 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VED16973 492082 492354 + barnase_inhibitor yhcO VED16975 492410 492673 - protein_YcfR ycfR VED16977 493038 493508 - arginine_repressor argR VED16979 493943 494881 + malate_dehydrogenase mdh VED16981 494944 496011 - protease degS VED16983 496101 497468 - serine_endoprotease degQ VED16985 497622 498020 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VED16986 498214 499341 + putative_ATP/GTP-binding_protein yhcM VED16988 499560 499988 + 50S_ribosomal_protein_L13 rplM VED16990 500004 500396 + 30S_ribosomal_protein_S9 rpsI VED16992 500791 501429 + stringent_starvation_protein_A sspA VED16994 501435 501932 + stringent_starvation_protein_B sspB VED16996 501975 503342 - C4-dicarboxylate_transporter dcuD VED16998 503722 504513 + GntR_family_transcriptional_regulator nanR VED17000 504635 505528 + N-acetylneuraminate_lyase nanA VED17002 505637 507127 + sialic_acid_transporter nanT VED17004 507175 507864 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VED17006 507861 508736 + putative_transcriptional_regulator nanK VED17008 508733 509197 + beta-galactosidase yhcH VED17010 509257 510384 - protein yhcG VED17012 510569 511285 - putative_transcriptional_regulator yhcF VED17014 511282 511827 - Uncharacterised_protein NCTC9100_00495 VED17016 511824 514205 - putative_outer_membrane_protein yhcD VED17018 514226 514900 - putative_periplasmic_chaperone_protein yhcA VED17020 515072 515836 - periplasmic_protein gltF VED17021 516396 517814 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VED17023 517827 522380 - glutamate_synthase_subunit_alpha gltB VED17026 522962 523891 + putative_radical_SAM_protein NCTC9100_00501 VED17028 523987 526323 + aerobic_respiration_control_protein arcB VED17030 526553 527206 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VED17032 527203 527931 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VED17034 527928 528560 - protein yrbL VED17036 528774 529046 - phosphocarrier_protein ptsO VED17038 529043 529897 - putative_ATPase yhbJ VED17040 529943 530434 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VED17010 90 684 107.449856734 0.0 PJR32596.1 VED17006 97 507 100.0 1e-178 PJR32597.1 VED17004 99 456 100.0 1e-160 PJR32598.1 VED17002 99 990 100.0 0.0 PJR32599.1 VED17000 100 611 100.0 0.0 PJR32600.1 VED16998 99 536 100.0 0.0 >> 80. LR134231_0 Source: Escherichia coli strain NCTC9087 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3784 Table of genes, locations, strands and annotations of subject cluster: VEC77015 486727 488172 + TldD_protein tldD VEC77016 488306 489235 - LysR_family_transcriptional_regulator aaeR VEC77017 489418 489621 + protein_AaeX aaeX VEC77018 489629 490561 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VEC77019 490567 492534 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VEC77020 492626 492898 + barnase_inhibitor yhcO VEC77021 492954 493217 - protein_YcfR ycfR VEC77022 493582 494052 - arginine_repressor argR VEC77023 494487 495425 + malate_dehydrogenase mdh VEC77024 495488 496555 - protease degS VEC77025 496645 498012 - serine_endoprotease degQ VEC77026 498166 498564 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VEC77027 498758 499885 + putative_ATP/GTP-binding_protein yhcM VEC77028 500104 500532 + 50S_ribosomal_protein_L13 rplM VEC77029 500548 500940 + 30S_ribosomal_protein_S9 rpsI VEC77030 501335 501973 + stringent_starvation_protein_A sspA_1 VEC77031 501979 502476 + stringent_starvation_protein_B sspB VEC77032 502519 503886 - C4-dicarboxylate_transporter dcuD VEC77033 504266 505057 + GntR_family_transcriptional_regulator nanR VEC77034 505179 506072 + N-acetylneuraminate_lyase nanA VEC77035 506181 507671 + sialic_acid_transporter nanT VEC77037 507719 508408 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VEC77039 508405 509280 + putative_transcriptional_regulator nanK VEC77041 509277 509741 + beta-galactosidase yhcH VEC77043 509801 510928 - protein yhcG VEC77045 511113 511829 - putative_transcriptional_regulator yhcF VEC77047 511826 512371 - Uncharacterised_protein NCTC9087_00493 VEC77049 512368 514749 - putative_outer_membrane_protein yhcD VEC77051 514770 515444 - putative_periplasmic_chaperone_protein yhcA VEC77053 515450 515554 - Uncharacterised_protein NCTC9087_00496 VEC77055 515616 516380 - periplasmic_protein gltF VEC77057 516940 518358 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VEC77059 518371 522924 - glutamate_synthase_subunit_alpha gltB VEC77061 523506 524435 + putative_radical_SAM_protein NCTC9087_00500 VEC77063 524531 526867 + aerobic_respiration_control_protein arcB VEC77065 527097 527750 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VEC77067 527747 528475 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VEC77069 528472 529104 - protein yrbL VEC77071 529318 529590 - phosphocarrier_protein ptsO VEC77073 529587 530441 - putative_ATPase yhbJ VEC77075 530487 530978 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VEC77043 90 684 107.449856734 0.0 PJR32596.1 VEC77039 97 507 100.0 1e-178 PJR32597.1 VEC77037 99 456 100.0 1e-160 PJR32598.1 VEC77035 99 990 100.0 0.0 PJR32599.1 VEC77034 100 611 100.0 0.0 PJR32600.1 VEC77033 99 536 100.0 0.0 >> 81. LR134228_0 Source: Escherichia coli strain NCTC9699 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3784 Table of genes, locations, strands and annotations of subject cluster: VEC65901 513778 515223 + TldD_protein tldD VEC65903 515357 516286 - LysR_family_transcriptional_regulator aaeR VEC65905 516469 516672 + protein_AaeX aaeX VEC65907 516680 517612 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VEC65909 517618 519585 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VEC65911 519677 519949 + barnase_inhibitor yhcO VEC65913 520005 520319 - protein_YcfR ycfR VEC65915 520633 521103 - arginine_repressor argR VEC65917 521538 522476 + malate_dehydrogenase mdh VEC65919 522539 523606 - protease degS VEC65921 523696 525063 - serine_endoprotease degQ VEC65923 525217 525615 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VEC65925 525809 526936 + putative_ATP/GTP-binding_protein yhcM VEC65927 527155 527583 + 50S_ribosomal_protein_L13 rplM VEC65929 527599 527991 + 30S_ribosomal_protein_S9 rpsI VEC65931 528386 529024 + stringent_starvation_protein_A sspA_1 VEC65933 529030 529527 + stringent_starvation_protein_B sspB VEC65935 529570 530937 - C4-dicarboxylate_transporter dcuD VEC65937 531317 532108 + GntR_family_transcriptional_regulator nanR VEC65939 532230 533123 + N-acetylneuraminate_lyase nanA VEC65941 533233 534723 + sialic_acid_transporter nanT VEC65943 534771 535460 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VEC65945 535457 536332 + putative_transcriptional_regulator nanK VEC65947 536329 536793 + beta-galactosidase yhcH VEC65949 536853 537980 - protein yhcG VEC65951 538165 538881 - putative_transcriptional_regulator yhcF VEC65953 538878 539423 - Uncharacterised_protein NCTC9699_00520 VEC65955 539420 541801 - putative_outer_membrane_protein yhcD VEC65957 541822 542496 - putative_periplasmic_chaperone_protein yhcA VEC65959 542502 542606 - Uncharacterised_protein NCTC9699_00523 VEC65962 542668 543432 - periplasmic_protein gltF VEC65964 543992 545410 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VEC65966 545423 549976 - glutamate_synthase_subunit_alpha gltB VEC65968 550558 551487 + putative_radical_SAM_protein NCTC9699_00527 VEC65970 551583 553919 + aerobic_respiration_control_protein arcB VEC65972 554149 554802 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VEC65973 554799 555527 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VEC65975 555524 556156 - protein yrbL VEC65977 556370 556642 - phosphocarrier_protein ptsO VEC65979 556639 557493 - putative_ATPase yhbJ VEC65981 557539 558030 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VEC65949 90 684 107.449856734 0.0 PJR32596.1 VEC65945 97 507 100.0 1e-178 PJR32597.1 VEC65943 99 456 100.0 1e-160 PJR32598.1 VEC65941 99 990 100.0 0.0 PJR32599.1 VEC65939 100 611 100.0 0.0 PJR32600.1 VEC65937 99 536 100.0 0.0 >> 82. CP047461_0 Source: Escherichia coli strain ZF34 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3784 Table of genes, locations, strands and annotations of subject cluster: QIG14035 2420142 2420996 + RNase_adapter_RapZ rapZ QIG14036 2420993 2421265 + PTS_phosphocarrier_protein_NPr npr QIG14037 2421479 2422111 + PhoP_regulatory_network_protein_YrbL yrbL QIG14038 2422108 2422836 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QIG14039 2422833 2423486 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIG14040 2423716 2426052 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIG16054 2426148 2427077 - TIGR01212_family_radical_SAM_protein GTK64_11665 QIG16055 2427752 2432212 + glutamate_synthase_large_subunit gltB QIG14041 2432225 2433643 + glutamate_synthase GTK64_11675 QIG14042 2434203 2434967 + DUF1120_domain-containing_protein GTK64_11680 QIG14043 2435139 2435813 + fimbria/pilus_periplasmic_chaperone GTK64_11685 QIG14044 2435834 2438215 + fimbrial_biogenesis_usher_protein GTK64_11690 QIG14045 2438212 2438757 + hypothetical_protein GTK64_11695 QIG14046 2438754 2439470 + DUF1120_domain-containing_protein GTK64_11700 QIG14047 2439655 2440782 + DUF1016_family_protein GTK64_11705 QIG14048 2440842 2441306 - YhcH/YjgK/YiaL_family_protein GTK64_11710 QIG14049 2441303 2442178 - ROK_family_protein GTK64_11715 QIG14050 2442175 2442864 - putative_N-acetylmannosamine-6-phosphate 2-epimerase GTK64_11720 QIG14051 2442912 2444402 - sialic_acid_transporter_NanT nanT QIG14052 2444511 2445404 - N-acetylneuraminate_lyase nanA QIG14053 2445526 2446317 - transcriptional_regulator_NanR nanR QIG14054 2446696 2448063 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIG14055 2448106 2448603 - ClpXP_protease_specificity-enhancing_factor sspB QIG14056 2448609 2449247 - stringent_starvation_protein_A sspA QIG14057 2449642 2450034 - 30S_ribosomal_protein_S9 rpsI QIG14058 2450050 2450478 - 50S_ribosomal_protein_L13 rplM QIG14059 2450697 2451824 - cell_division_protein_ZapE zapE QIG14060 2452018 2452416 + DUF1043_family_protein GTK64_11770 QIG14061 2452570 2453937 + serine_endoprotease_DegQ degQ QIG14062 2454027 2455094 + outer_membrane-stress_sensor_serine endopeptidase DegS degS QIG14063 2455157 2456095 - malate_dehydrogenase mdh QIG14064 2456530 2457000 + transcriptional_regulator_ArgR argR QIG14065 2457365 2457628 + peroxide/acid_stress_response_protein_YhcN yhcN QIG14066 2457684 2457956 - hypothetical_protein GTK64_11800 QIG14067 2458048 2460015 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIG14068 2460021 2460953 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QIG14069 2460961 2461164 - DUF1656_domain-containing_protein GTK64_11815 QIG14070 2461347 2462276 + HTH-type_transcriptional_activator_AaeR aaeR QIG14071 2462410 2463855 - metalloprotease_TldD tldD QIG14072 2464285 2468085 - AsmA2_domain-containing_protein GTK64_11830 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QIG14047 90 684 107.449856734 0.0 PJR32596.1 QIG14049 97 507 100.0 1e-178 PJR32597.1 QIG14050 99 456 100.0 1e-160 PJR32598.1 QIG14051 99 990 100.0 0.0 PJR32599.1 QIG14052 100 611 100.0 0.0 PJR32600.1 QIG14053 99 536 100.0 0.0 >> 83. CP047455_0 Source: Escherichia coli strain ZF31 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3784 Table of genes, locations, strands and annotations of subject cluster: QIG09764 2419465 2420319 + RNase_adapter_RapZ rapZ QIG09765 2420316 2420588 + PTS_phosphocarrier_protein_NPr npr QIG09766 2420802 2421434 + PhoP_regulatory_network_protein_YrbL yrbL QIG09767 2421431 2422159 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QIG09768 2422156 2422809 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIG09769 2423039 2425375 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIG09770 2425471 2426400 - TIGR01212_family_radical_SAM_protein GTK48_11655 QIG11779 2427075 2431535 + glutamate_synthase_large_subunit gltB QIG09771 2431548 2432966 + glutamate_synthase GTK48_11665 QIG09772 2433526 2434290 + DUF1120_domain-containing_protein GTK48_11670 QIG09773 2434462 2435136 + fimbria/pilus_periplasmic_chaperone GTK48_11675 QIG09774 2435157 2437538 + fimbrial_biogenesis_usher_protein GTK48_11680 QIG09775 2437535 2438080 + hypothetical_protein GTK48_11685 QIG09776 2438077 2438793 + DUF1120_domain-containing_protein GTK48_11690 QIG09777 2438978 2440105 + DUF1016_family_protein GTK48_11695 QIG09778 2440165 2440629 - YhcH/YjgK/YiaL_family_protein GTK48_11700 QIG09779 2440626 2441501 - ROK_family_protein GTK48_11705 QIG09780 2441498 2442187 - putative_N-acetylmannosamine-6-phosphate 2-epimerase GTK48_11710 QIG09781 2442235 2443725 - sialic_acid_transporter_NanT nanT QIG09782 2443834 2444727 - N-acetylneuraminate_lyase nanA QIG09783 2444849 2445640 - transcriptional_regulator_NanR nanR QIG09784 2446019 2447386 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIG09785 2447429 2447926 - ClpXP_protease_specificity-enhancing_factor sspB QIG09786 2447932 2448570 - stringent_starvation_protein_A sspA QIG09787 2448965 2449357 - 30S_ribosomal_protein_S9 rpsI QIG09788 2449373 2449801 - 50S_ribosomal_protein_L13 rplM QIG09789 2450020 2451147 - cell_division_protein_ZapE zapE QIG09790 2451341 2451739 + DUF1043_family_protein GTK48_11760 QIG09791 2451893 2453260 + serine_endoprotease_DegQ degQ QIG09792 2453350 2454417 + outer_membrane-stress_sensor_serine endopeptidase DegS degS QIG09793 2454480 2455418 - malate_dehydrogenase mdh QIG09794 2455853 2456323 + transcriptional_regulator_ArgR argR QIG09795 2456688 2456951 + peroxide/acid_stress_response_protein_YhcN yhcN QIG09796 2457007 2457279 - hypothetical_protein GTK48_11790 QIG09797 2457371 2459338 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIG09798 2459344 2460276 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QIG09799 2460284 2460487 - DUF1656_domain-containing_protein GTK48_11805 QIG09800 2460670 2461599 + HTH-type_transcriptional_activator_AaeR aaeR QIG09801 2461733 2463178 - metalloprotease_TldD tldD QIG09802 2463608 2467408 - AsmA2_domain-containing_protein GTK48_11820 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QIG09777 90 684 107.449856734 0.0 PJR32596.1 QIG09779 97 507 100.0 1e-178 PJR32597.1 QIG09780 99 456 100.0 1e-160 PJR32598.1 QIG09781 99 990 100.0 0.0 PJR32599.1 QIG09782 100 611 100.0 0.0 PJR32600.1 QIG09783 99 536 100.0 0.0 >> 84. CP038857_0 Source: Escherichia coli strain PigCaeca_2 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3784 Table of genes, locations, strands and annotations of subject cluster: QCA21223 508489 509934 + metalloprotease_TldD tldD QCA21224 510068 510997 - HTH-type_transcriptional_activator_AaeR aaeR QCA21225 511180 511383 + DUF1656_domain-containing_protein E5285_02460 QCA21226 511391 512323 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCA21227 512329 514296 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCA21228 514388 514660 + hypothetical_protein E5285_02475 QCA21229 514716 514979 - peroxide/acid_stress_response_protein_YhcN yhcN QCA21230 515344 515814 - transcriptional_regulator_ArgR argR QCA21231 516249 517187 + malate_dehydrogenase mdh QCA21232 517250 518317 - serine_endoprotease_DegS E5285_02495 QCA21233 518407 519774 - serine_endoprotease_DegQ degQ QCA21234 519928 520326 - DUF1043_family_protein E5285_02505 QCA21235 520520 521647 + cell_division_protein_ZapE E5285_02510 QCA21236 521866 522294 + 50S_ribosomal_protein_L13 rplM QCA21237 522310 522702 + 30S_ribosomal_protein_S9 rpsI QCA21238 523097 523735 + stringent_starvation_protein_A sspA QCA21239 523741 524238 + ClpXP_protease_specificity-enhancing_factor sspB QCA21240 524281 525648 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QCA21241 526028 526819 + transcriptional_regulator_NanR nanR QCA21242 526941 527834 + N-acetylneuraminate_lyase nanA QCA21243 527943 529433 + sialic_acid_transporter_NanT nanT QCA21244 529481 530170 + N-acetylmannosamine-6-phosphate_2-epimerase E5285_02555 QCA21245 530167 531042 + N-acetylmannosamine_kinase E5285_02560 QCA21246 531039 531503 + YhcH/YjgK/YiaL_family_protein E5285_02565 QCA21247 531563 532690 - DUF1016_domain-containing_protein E5285_02570 QCA21248 532875 533591 - DUF1120_domain-containing_protein E5285_02575 QCA21249 533588 534133 - hypothetical_protein E5285_02580 E5285_02585 534130 534831 - hypothetical_protein no_locus_tag QCA21250 534844 536117 + IS3-like_element_IS2_family_transposase E5285_02590 E5285_02595 536129 537847 - fimbrial_protein no_locus_tag QCA21251 537868 538542 - fimbrial_chaperone_protein E5285_02600 QCA21252 538714 539478 - DUF1120_domain-containing_protein E5285_02605 QCA21253 540038 541456 - glutamate_synthase E5285_02610 QCA21254 541469 545929 - glutamate_synthase_large_subunit gltB QCA21255 546604 547533 + TIGR01212_family_radical_SAM_protein E5285_02620 QCA21256 547629 549965 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QCA21257 550195 550848 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QCA21258 550845 551573 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QCA21259 551570 552202 - PhoP_regulatory_network_protein_YrbL yrbL QCA21260 552416 552688 - PTS_phosphocarrier_protein_NPr npr QCA21261 552685 553539 - RNase_adapter_RapZ rapZ Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCA21247 90 684 107.449856734 0.0 PJR32596.1 QCA21245 97 507 100.0 1e-178 PJR32597.1 QCA21244 99 456 100.0 1e-160 PJR32598.1 QCA21243 99 990 100.0 0.0 PJR32599.1 QCA21242 100 611 100.0 0.0 PJR32600.1 QCA21241 99 536 100.0 0.0 >> 85. CP038791_0 Source: Escherichia coli strain PF9285 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3784 Table of genes, locations, strands and annotations of subject cluster: QBZ31497 589762 591207 + metalloprotease_TldD tldD QBZ31498 591341 592270 - HTH-type_transcriptional_activator_AaeR aaeR QBZ31499 592453 592656 + DUF1656_domain-containing_protein E5M00_02965 QBZ31500 592664 593596 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QBZ31501 593602 595569 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QBZ31502 595661 595933 + hypothetical_protein E5M00_02980 QBZ31503 595989 596252 - peroxide/acid_stress_response_protein_YhcN yhcN QBZ31504 596617 597087 - transcriptional_regulator_ArgR argR QBZ31505 597522 598460 + malate_dehydrogenase mdh QBZ31506 598523 599590 - serine_endoprotease_DegS E5M00_03000 QBZ31507 599680 601047 - serine_endoprotease_DegQ degQ QBZ31508 601201 601599 - DUF1043_family_protein E5M00_03010 QBZ31509 601793 602920 + cell_division_protein_ZapE E5M00_03015 QBZ31510 603139 603567 + 50S_ribosomal_protein_L13 rplM QBZ31511 603583 603975 + 30S_ribosomal_protein_S9 rpsI QBZ31512 604370 605008 + stringent_starvation_protein_A sspA QBZ31513 605014 605511 + ClpXP_protease_specificity-enhancing_factor sspB QBZ31514 605554 606921 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QBZ31515 607301 608092 + transcriptional_regulator_NanR nanR QBZ31516 608214 609107 + N-acetylneuraminate_lyase nanA QBZ31517 609216 610706 + sialic_acid_transporter_NanT nanT QBZ31518 610754 611443 + N-acetylmannosamine-6-phosphate_2-epimerase E5M00_03060 QBZ31519 611440 612315 + N-acetylmannosamine_kinase E5M00_03065 QBZ31520 612312 612776 + YhcH/YjgK/YiaL_family_protein E5M00_03070 QBZ31521 612836 613963 - DUF1016_domain-containing_protein E5M00_03075 QBZ31522 614148 614864 - DUF1120_domain-containing_protein E5M00_03080 QBZ31523 614861 615406 - hypothetical_protein E5M00_03085 QBZ31524 615403 617763 - fimbrial_protein E5M00_03090 QBZ31525 617801 618475 - fimbrial_chaperone_protein E5M00_03095 QBZ31526 618647 619411 - DUF1120_domain-containing_protein E5M00_03100 QBZ31527 619971 621389 - glutamate_synthase E5M00_03105 QBZ31528 621402 625862 - glutamate_synthase_large_subunit gltB QBZ31529 626537 627466 + TIGR01212_family_radical_SAM_protein E5M00_03115 QBZ31530 627562 629898 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QBZ31531 630128 630781 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QBZ31532 630778 631506 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QBZ31533 631503 632135 - PhoP_regulatory_network_protein_YrbL yrbL QBZ31534 632349 632621 - PTS_phosphocarrier_protein_NPr npr QBZ31535 632618 633472 - RNase_adapter_RapZ rapZ QBZ31536 633518 634009 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QBZ31521 90 684 107.449856734 0.0 PJR32596.1 QBZ31519 97 507 100.0 1e-178 PJR32597.1 QBZ31518 99 456 100.0 1e-160 PJR32598.1 QBZ31517 99 990 100.0 0.0 PJR32599.1 QBZ31516 100 611 100.0 0.0 PJR32600.1 QBZ31515 99 536 100.0 0.0 >> 86. CP030281_0 Source: Escherichia coli strain E308 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3784 Table of genes, locations, strands and annotations of subject cluster: AXT79322 532741 534186 + metalloprotease_TldD DQW89_02745 AXT79323 534320 535249 - HTH-type_transcriptional_activator_AaeR DQW89_02750 AXT79324 535432 535635 + protein_AaeX DQW89_02755 AXT79325 535643 536575 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DQW89_02760 AXT79326 536581 538548 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DQW89_02765 AXT79327 538640 538912 + hypothetical_protein DQW89_02770 AXT79328 538968 539231 - DUF1471_domain-containing_protein DQW89_02775 AXT79329 539596 540066 - arginine_repressor DQW89_02780 AXT79330 540501 541439 + malate_dehydrogenase DQW89_02785 AXT79331 541502 542569 - outer_membrane-stress_sensor_serine endopeptidase DegS DQW89_02790 AXT79332 542659 544026 - periplasmic_pH-dependent_serine_endoprotease DegQ DQW89_02795 AXT83165 544180 544578 - DUF1043_family_protein DQW89_02800 AXT79333 544772 545899 + cell_division_protein_ZapE DQW89_02805 AXT79334 546118 546546 + 50S_ribosomal_protein_L13 DQW89_02810 AXT79335 546562 546954 + 30S_ribosomal_protein_S9 DQW89_02815 AXT79336 546872 547093 - hypothetical_protein DQW89_02820 AXT83167 547067 547246 + hypothetical_protein DQW89_02825 AXT83166 547198 547407 - hypothetical_protein DQW89_02830 AXT79337 547349 547987 + stringent_starvation_protein_A DQW89_02835 AXT79338 547993 548490 + stringent_starvation_protein_B DQW89_02840 AXT79339 548533 549900 - C4-dicarboxylate_transporter_DcuC DQW89_02845 DQW89_02850 549900 550010 + transposase no_locus_tag AXT79340 550280 551071 + transcriptional_regulator_NanR nanR AXT79341 551193 552086 + N-acetylneuraminate_lyase nanA AXT79342 552196 553686 + MFS_transporter DQW89_02865 AXT79343 553734 554423 + N-acetylmannosamine-6-phosphate_2-epimerase DQW89_02870 AXT79344 554420 555295 + N-acetylmannosamine_kinase DQW89_02875 AXT79345 555292 555756 + YhcH/YjgK/YiaL_family_protein DQW89_02880 AXT79346 555816 556943 - DUF1016_domain-containing_protein DQW89_02885 AXT79347 557128 557844 - DUF1120_domain-containing_protein DQW89_02890 AXT79348 557841 558386 - hypothetical_protein DQW89_02895 AXT79349 558383 560764 - fimbrial_protein DQW89_02900 AXT79350 560785 561459 - fimbrial_chaperone_protein DQW89_02905 AXT79351 561631 562395 - glutamate_synthase_operon_protein_GltF DQW89_02910 AXT79352 562516 562800 - hypothetical_protein DQW89_02915 AXT79353 562955 564373 - glutamate_synthase DQW89_02920 AXT79354 564386 568846 - glutamate_synthase_large_subunit DQW89_02925 DQW89_02930 568769 568995 + hypothetical_protein no_locus_tag AXT79355 568893 569129 + hypothetical_protein DQW89_02935 AXT83168 569521 570450 + TIGR01212_family_radical_SAM_protein DQW89_02940 AXT79356 570546 572882 + hybrid_sensor_histidine_kinase/response regulator DQW89_02945 AXT79357 573112 573765 + glutamine_amidotransferase DQW89_02950 AXT79358 573762 574490 + monofunctional_biosynthetic_peptidoglycan transglycosylase DQW89_02955 AXT79359 574487 575119 - PhoP_regulatory_network_protein_YrbL DQW89_02960 AXT79360 575332 575604 - phosphocarrier_protein_NPr DQW89_02965 AXT79361 575601 576455 - RNase_adaptor_protein_RapZ DQW89_02970 AXT79362 576501 576992 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN DQW89_02975 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AXT79346 90 684 107.449856734 0.0 PJR32596.1 AXT79344 97 507 100.0 1e-178 PJR32597.1 AXT79343 99 456 100.0 1e-160 PJR32598.1 AXT79342 99 990 100.0 0.0 PJR32599.1 AXT79341 100 611 100.0 0.0 PJR32600.1 AXT79340 99 536 100.0 0.0 >> 87. CP026929_0 Source: Escherichia coli strain CFS3246 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3784 Table of genes, locations, strands and annotations of subject cluster: QHF66674 541016 542461 + metalloprotease_TldD C4962_02805 QHF66675 542595 543524 - HTH-type_transcriptional_activator_AaeR C4962_02810 QHF66676 543707 543910 + protein_AaeX C4962_02815 QHF66677 543918 544850 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C4962_02820 QHF66678 544856 546823 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C4962_02825 QHF66679 546915 547187 + hypothetical_protein C4962_02830 QHF66680 547243 547506 - DUF1471_domain-containing_protein C4962_02835 QHF66681 547871 548341 - arginine_repressor C4962_02840 QHF66682 548776 549714 + malate_dehydrogenase C4962_02845 QHF66683 549777 550844 - outer_membrane-stress_sensor_serine endopeptidase DegS C4962_02850 QHF66684 550934 552301 - periplasmic_pH-dependent_serine_endoprotease DegQ C4962_02855 QHF70564 552455 552853 - hypothetical_protein C4962_02860 QHF66685 553047 554174 + cell_division_protein_ZapE C4962_02865 QHF66686 554393 554821 + 50S_ribosomal_protein_L13 C4962_02870 QHF66687 554837 555229 + 30S_ribosomal_protein_S9 C4962_02875 QHF70565 555473 555682 - hypothetical_protein C4962_02880 QHF66688 555624 556262 + stringent_starvation_protein_A C4962_02885 QHF66689 556268 556765 + stringent_starvation_protein_B C4962_02890 QHF66690 556808 558175 - C4-dicarboxylate_transporter C4962_02895 C4962_02900 558175 558285 + transposase no_locus_tag QHF66691 558555 559346 + transcriptional_regulator_NanR nanR QHF66692 559468 560361 + N-acetylneuraminate_lyase nanA QHF66693 560470 561960 + MFS_transporter C4962_02915 QHF66694 562008 562697 + N-acetylmannosamine-6-phosphate_2-epimerase C4962_02920 QHF66695 562694 563569 + N-acetylmannosamine_kinase C4962_02925 QHF66696 563566 564030 + YhcH/YjgK/YiaL_family_protein C4962_02930 QHF66697 564090 565217 - DUF1016_domain-containing_protein C4962_02935 QHF66698 565402 566118 - DUF1120_domain-containing_protein C4962_02940 QHF66699 566115 566660 - hypothetical_protein C4962_02945 QHF66700 566657 569038 - fimbrial_protein C4962_02950 QHF66701 569059 569733 - fimbrial_chaperone_protein C4962_02955 QHF66702 569905 570669 - glutamate_synthase_operon_protein_GltF C4962_02960 C4962_02965 570756 571453 - IS1_family_transposase no_locus_tag C4962_02970 571410 571508 - glycosyltransferase no_locus_tag QHF66703 571567 571851 - hypothetical_protein C4962_02975 QHF66704 572006 573424 - glutamate_synthase C4962_02980 QHF66705 573437 577897 - glutamate_synthase_large_subunit C4962_02985 C4962_02990 577820 578046 + hypothetical_protein no_locus_tag QHF66706 577944 578180 + hypothetical_protein C4962_02995 QHF70566 578572 579501 + TIGR01212_family_radical_SAM_protein C4962_03000 QHF66707 579597 581933 + hybrid_sensor_histidine_kinase/response regulator C4962_03005 QHF66708 582163 582816 + glutamine_amidotransferase C4962_03010 QHF66709 582813 583541 + monofunctional_biosynthetic_peptidoglycan transglycosylase C4962_03015 QHF66710 583538 584170 - protein_YrbL yrbL QHF66711 584384 584656 - phosphocarrier_protein_NPr C4962_03025 QHF66712 584653 585507 - RNase_adaptor_protein_RapZ C4962_03030 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHF66697 90 684 107.449856734 0.0 PJR32596.1 QHF66695 97 507 100.0 1e-178 PJR32597.1 QHF66694 99 456 100.0 1e-160 PJR32598.1 QHF66693 99 990 100.0 0.0 PJR32599.1 QHF66692 100 611 100.0 0.0 PJR32600.1 QHF66691 99 536 100.0 0.0 >> 88. CP045863_0 Source: Escherichia coli O157:H7 strain CFSAN076619 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QGG87271 3745847 3746833 + arabinose-5-phosphate_isomerase_KdsD kdsD QGG87272 3746854 3747420 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QGG87273 3747417 3747992 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QGG87274 3747961 3748518 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QGG87275 3748525 3749250 + LPS_export_ABC_transporter_ATP-binding_protein lptB QGG87276 3749298 3750731 + RNA_polymerase_factor_sigma-54 rpoN QGG87277 3750754 3751041 + ribosome_hibernation_promoting_factor GIX96_18835 QGG87278 3751159 3751650 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QGG87279 3751696 3752550 + RNase_adapter_RapZ rapZ QGG87280 3752547 3752819 + PTS_phosphocarrier_protein_NPr npr QGG87281 3753033 3753665 + PhoP_regulatory_network_protein_YrbL yrbL QGG87282 3753662 3754390 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QGG87283 3754387 3755040 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QGG87284 3755270 3757606 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QGG87285 3757702 3758631 - TIGR01212_family_radical_SAM_protein GIX96_18875 QGG88819 3759305 3763765 + glutamate_synthase_large_subunit gltB QGG87286 3763778 3765196 + NAD(P)-binding_protein GIX96_18885 QGG87287 3765380 3766429 + DUF1016_family_protein GIX96_18890 QGG87288 3766489 3766953 - YhcH/YjgK/YiaL_family_protein GIX96_18895 QGG87289 3766950 3767825 - ROK_family_protein GIX96_18900 QGG87290 3767822 3768511 - putative_N-acetylmannosamine-6-phosphate 2-epimerase GIX96_18905 QGG87291 3768559 3770049 - sialic_acid_transporter_NanT nanT QGG87292 3770158 3771051 - N-acetylneuraminate_lyase nanA QGG87293 3771173 3771964 - transcriptional_regulator_NanR nanR QGG87294 3772344 3773708 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QGG87295 3773743 3774240 - ClpXP_protease_specificity-enhancing_factor sspB QGG87296 3774246 3774884 - stringent_starvation_protein_A sspA QGG87297 3775279 3775671 - 30S_ribosomal_protein_S9 rpsI QGG87298 3775687 3776115 - 50S_ribosomal_protein_L13 rplM QGG87299 3776334 3777461 - cell_division_protein_ZapE zapE QGG87300 3777655 3778053 + DUF1043_family_protein GIX96_18955 QGG87301 3778207 3779574 + serine_endoprotease_DegQ degQ QGG87302 3779664 3780731 + outer_membrane-stress_sensor_serine endopeptidase DegS degS QGG87303 3780795 3781733 - malate_dehydrogenase mdh QGG87304 3782168 3782638 + transcriptional_regulator_ArgR argR QGG87305 3783003 3783266 + peroxide/acid_stress_response_protein_YhcN yhcN QGG87306 3783322 3783594 - hypothetical_protein GIX96_18985 QGG87307 3783686 3785653 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QGG87308 3785659 3786588 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QGG87309 3786596 3786799 - DUF1656_domain-containing_protein GIX96_19000 QGG87310 3786982 3787911 + HTH-type_transcriptional_activator_AaeR aaeR QGG87311 3788045 3789490 - metalloprotease_TldD tldD QGG87312 3789646 3793446 - AsmA2_domain-containing_protein GIX96_19015 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QGG87287 100 723 100.0 0.0 PJR32595.1 QGG87288 100 318 100.0 6e-109 PJR32596.1 QGG87289 100 570 100.0 0.0 PJR32597.1 QGG87290 100 461 100.0 2e-162 PJR32598.1 QGG87291 100 993 100.0 0.0 PJR32600.1 QGG87293 100 537 100.0 0.0 >> 89. CP040572_0 Source: Escherichia coli O157:H7 strain ECP17-46 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QCV15768 558651 560096 + metalloprotease_TldD tldD QCV15769 560230 561159 - HTH-type_transcriptional_activator_AaeR aaeR QCV15770 561342 561545 + DUF1656_domain-containing_protein FGA21_02815 QCV15771 561553 562482 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCV15772 562488 564455 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCV15773 564547 564819 + hypothetical_protein FGA21_02830 QCV15774 564875 565138 - peroxide/acid_stress_response_protein_YhcN yhcN QCV15775 565503 565973 - transcriptional_regulator_ArgR argR QCV15776 566408 567346 + malate_dehydrogenase mdh QCV15777 567410 568477 - serine_endoprotease_DegS FGA21_02850 QCV15778 568567 569934 - serine_endoprotease_DegQ degQ QCV15779 570088 570486 - DUF1043_family_protein FGA21_02860 QCV15780 570680 571807 + cell_division_protein_ZapE FGA21_02865 QCV15781 572026 572454 + 50S_ribosomal_protein_L13 rplM QCV15782 572470 572862 + 30S_ribosomal_protein_S9 rpsI QCV15783 572780 573001 - hypothetical_protein FGA21_02880 QCV15784 573257 573895 + stringent_starvation_protein_A sspA QCV15785 573901 574398 + ClpXP_protease_specificity-enhancing_factor sspB QCV15786 574433 575797 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QCV15787 576177 576968 + transcriptional_regulator_NanR nanR QCV15788 577090 577983 + N-acetylneuraminate_lyase nanA QCV15789 578092 579582 + sialic_acid_transporter_NanT nanT QCV15790 579630 580319 + N-acetylmannosamine-6-phosphate_2-epimerase FGA21_02915 QCV15791 580316 581191 + N-acetylmannosamine_kinase FGA21_02920 QCV15792 581188 581652 + DUF386_domain-containing_protein FGA21_02925 QCV15793 581712 582761 - DUF1016_domain-containing_protein FGA21_02930 QCV15794 582945 584363 - glutamate_synthase_small_subunit FGA21_02935 QCV20198 584376 588836 - glutamate_synthase_large_subunit gltB QCV15795 589510 590439 + TIGR01212_family_radical_SAM_protein FGA21_02945 QCV15796 590535 592871 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QCV15797 593101 593754 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QCV15798 593751 594479 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QCV15799 594476 595108 - PhoP_regulatory_network_protein_YrbL yrbL QCV15800 595322 595594 - PTS_phosphocarrier_protein_NPr npr QCV15801 595591 596445 - RNase_adapter_RapZ rapZ QCV15802 596491 596982 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QCV15803 597100 597387 - ribosome_hibernation_promoting_factor FGA21_02985 QCV15804 597410 598843 - RNA_polymerase_factor_sigma-54 rpoN QCV15805 598891 599616 - LPS_export_ABC_transporter_ATP-binding_protein lptB QCV15806 599623 600180 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QCV15807 600149 600724 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCV15808 600721 601287 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QCV15809 601308 602294 - arabinose-5-phosphate_isomerase_KdsD kdsD QCV15810 602308 603285 - calcium/sodium_antiporter FGA21_03020 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCV15793 100 723 100.0 0.0 PJR32595.1 QCV15792 100 318 100.0 6e-109 PJR32596.1 QCV15791 100 570 100.0 0.0 PJR32597.1 QCV15790 100 461 100.0 2e-162 PJR32598.1 QCV15789 100 993 100.0 0.0 PJR32600.1 QCV15787 100 537 100.0 0.0 >> 90. CP040570_0 Source: Escherichia coli O157:H7 strain ECP17-1298 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QCV05698 542698 544143 + metalloprotease_TldD tldD QCV05699 544277 545206 - HTH-type_transcriptional_activator_AaeR aaeR QCV05700 545389 545592 + DUF1656_domain-containing_protein FGA23_02720 QCV05701 545600 546529 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCV05702 546535 548502 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCV05703 548594 548866 + hypothetical_protein FGA23_02735 QCV05704 548922 549185 - peroxide/acid_stress_response_protein_YhcN yhcN QCV05705 549550 550020 - transcriptional_regulator_ArgR argR QCV05706 550455 551393 + malate_dehydrogenase mdh QCV05707 551457 552524 - serine_endoprotease_DegS FGA23_02755 QCV05708 552614 553981 - serine_endoprotease_DegQ degQ QCV05709 554135 554533 - DUF1043_family_protein FGA23_02765 QCV05710 554727 555854 + cell_division_protein_ZapE FGA23_02770 QCV05711 556073 556501 + 50S_ribosomal_protein_L13 rplM QCV05712 556517 556909 + 30S_ribosomal_protein_S9 rpsI QCV05713 556827 557048 - hypothetical_protein FGA23_02785 QCV05714 557304 557942 + stringent_starvation_protein_A sspA QCV05715 557948 558445 + ClpXP_protease_specificity-enhancing_factor sspB QCV05716 558480 559844 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QCV05717 560224 561015 + transcriptional_regulator_NanR nanR QCV05718 561137 562030 + N-acetylneuraminate_lyase nanA QCV05719 562139 563629 + sialic_acid_transporter_NanT nanT QCV05720 563677 564366 + N-acetylmannosamine-6-phosphate_2-epimerase FGA23_02820 QCV05721 564363 565238 + N-acetylmannosamine_kinase FGA23_02825 QCV05722 565235 565699 + DUF386_domain-containing_protein FGA23_02830 QCV05723 565759 566808 - DUF1016_domain-containing_protein FGA23_02835 QCV05724 566992 568410 - glutamate_synthase_small_subunit FGA23_02840 QCV10135 568423 572883 - glutamate_synthase_large_subunit gltB QCV05725 573557 574486 + TIGR01212_family_radical_SAM_protein FGA23_02850 QCV05726 574582 576918 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QCV05727 577148 577801 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QCV05728 577798 578526 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QCV05729 578523 579155 - PhoP_regulatory_network_protein_YrbL yrbL QCV05730 579369 579641 - PTS_phosphocarrier_protein_NPr npr QCV05731 579638 580492 - RNase_adapter_RapZ rapZ QCV05732 580538 581029 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QCV05733 581147 581434 - ribosome_hibernation_promoting_factor FGA23_02890 QCV05734 581457 582890 - RNA_polymerase_factor_sigma-54 rpoN QCV05735 582938 583663 - LPS_export_ABC_transporter_ATP-binding_protein lptB QCV05736 583670 584227 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QCV05737 584196 584771 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCV05738 584768 585334 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QCV05739 585355 586341 - arabinose-5-phosphate_isomerase_KdsD kdsD QCV05740 586355 587332 - calcium/sodium_antiporter FGA23_02925 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCV05723 100 723 100.0 0.0 PJR32595.1 QCV05722 100 318 100.0 6e-109 PJR32596.1 QCV05721 100 570 100.0 0.0 PJR32597.1 QCV05720 100 461 100.0 2e-162 PJR32598.1 QCV05719 100 993 100.0 0.0 PJR32600.1 QCV05717 100 537 100.0 0.0 >> 91. CP038494_0 Source: Escherichia coli O157:H7 strain TT12B chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QGF18046 4700407 4701393 + arabinose-5-phosphate_isomerase_KdsD kdsD QGF18047 4701414 4701980 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QGF18048 4701977 4702552 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QGF18049 4702521 4703078 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QGF18050 4703085 4703810 + lipopolysaccharide_ABC_transporter_ATP-binding protein E5F07_23620 QGF18051 4703858 4705291 + RNA_polymerase_factor_sigma-54 rpoN QGF18052 4705314 4705601 + ribosome_hibernation_promoting_factor E5F07_23630 QGF18053 4705719 4706210 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QGF18054 4706256 4707110 + RNase_adapter_RapZ rapZ QGF18055 4707107 4707379 + PTS_phosphocarrier_protein_NPr npr QGF18056 4707593 4708225 + PhoP_regulatory_network_protein_YrbL yrbL QGF18057 4708222 4708950 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QGF18058 4708947 4709600 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QGF18059 4709830 4712166 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QGF18060 4712262 4713191 - TIGR01212_family_radical_SAM_protein E5F07_23670 QGF18061 4713865 4718325 + glutamate_synthase_large_subunit gltB QGF18062 4718338 4719756 + glutamate_synthase_small_subunit E5F07_23680 QGF18063 4719940 4720989 + DUF1016_domain-containing_protein E5F07_23685 QGF18064 4721049 4721513 - YhcH/YjgK/YiaL_family_protein E5F07_23690 QGF18065 4721510 4722385 - N-acetylmannosamine_kinase E5F07_23695 QGF18066 4722382 4723071 - N-acetylmannosamine-6-phosphate_2-epimerase E5F07_23700 QGF18067 4723119 4724609 - sialic_acid_transporter_NanT nanT QGF18068 4724718 4725611 - N-acetylneuraminate_lyase nanA QGF18069 4725733 4726524 - transcriptional_regulator_NanR nanR QGF18070 4726904 4728268 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QGF18071 4728303 4728800 - ClpXP_protease_specificity-enhancing_factor sspB QGF18072 4728806 4729444 - stringent_starvation_protein_A sspA QGF18073 4729700 4729921 + hypothetical_protein E5F07_23735 QGF18074 4729839 4730231 - 30S_ribosomal_protein_S9 rpsI QGF18075 4730247 4730675 - 50S_ribosomal_protein_L13 rplM QGF18076 4730894 4732021 - cell_division_protein_ZapE E5F07_23750 QGF18077 4732215 4732613 + DUF1043_family_protein E5F07_23755 QGF18078 4732767 4734134 + serine_endoprotease_DegQ degQ QGF18079 4734224 4735291 + serine_endoprotease_DegS E5F07_23765 QGF18080 4735355 4736293 - malate_dehydrogenase mdh QGF18081 4736728 4737198 + transcriptional_regulator_ArgR argR QGF18082 4737563 4737826 + peroxide/acid_stress_response_protein_YhcN yhcN QGF18083 4737882 4738154 - hypothetical_protein E5F07_23785 QGF18084 4738246 4740213 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QGF18085 4740219 4741148 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QGF18086 4741156 4741359 - DUF1656_domain-containing_protein E5F07_23800 QGF18087 4741542 4742471 + HTH-type_transcriptional_activator_AaeR aaeR QGF18088 4742605 4744050 - metalloprotease_TldD tldD QGF18089 4744206 4748006 - AsmA2_domain-containing_protein E5F07_23815 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QGF18063 100 723 100.0 0.0 PJR32595.1 QGF18064 100 318 100.0 6e-109 PJR32596.1 QGF18065 100 570 100.0 0.0 PJR32597.1 QGF18066 100 461 100.0 2e-162 PJR32598.1 QGF18067 100 993 100.0 0.0 PJR32600.1 QGF18069 100 537 100.0 0.0 >> 92. CP035545_0 Source: Escherichia coli strain FSIS11705876 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QGJ24701 4096718 4097704 + arabinose-5-phosphate_isomerase_KdsD kdsD QGJ24702 4097725 4098291 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QGJ24703 4098288 4098863 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QGJ24704 4098832 4099389 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QGJ24705 4099396 4100121 + lipopolysaccharide_ABC_transporter_ATP-binding protein EB814_21400 QGJ24706 4100169 4101602 + RNA_polymerase_factor_sigma-54 EB814_21405 QGJ24707 4101625 4101912 + ribosome_hibernation_promoting_factor EB814_21410 QGJ24708 4102030 4102521 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QGJ24709 4102567 4103421 + RNase_adapter_RapZ rapZ QGJ24710 4103418 4103690 + PTS_phosphocarrier_protein_NPr EB814_21425 QGJ24711 4103904 4104536 + PhoP_regulatory_network_protein_YrbL yrbL QGJ24712 4104533 4105261 - monofunctional_biosynthetic_peptidoglycan transglycosylase EB814_21435 QGJ24713 4105258 4105911 - isoprenoid_biosynthesis_protein_ElbB elbB QGJ24714 4106141 4108477 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QGJ24715 4108573 4109502 - TIGR01212_family_radical_SAM_protein EB814_21450 QGJ24716 4110176 4114636 + glutamate_synthase_large_subunit gltB QGJ24717 4114649 4116067 + glutamate_synthase_small_subunit EB814_21460 QGJ24718 4116251 4117300 + DUF1016_domain-containing_protein EB814_21465 QGJ24719 4117360 4117824 - YhcH/YjgK/YiaL_family_protein EB814_21470 QGJ24720 4117821 4118696 - N-acetylmannosamine_kinase EB814_21475 QGJ24721 4118693 4119382 - N-acetylmannosamine-6-phosphate_2-epimerase EB814_21480 QGJ24722 4119430 4120920 - MFS_transporter EB814_21485 QGJ24723 4121029 4121922 - N-acetylneuraminate_lyase nanA QGJ24724 4122044 4122835 - transcriptional_regulator_NanR EB814_21495 QGJ24725 4123215 4124579 + C4-dicarboxylate_transporter_DcuC dcuC QGJ24726 4124614 4125111 - ClpXP_protease_specificity-enhancing_factor sspB QGJ24727 4125117 4125755 - stringent_starvation_protein_A EB814_21510 QGJ24728 4126011 4126232 + hypothetical_protein EB814_21515 QGJ24729 4126150 4126542 - 30S_ribosomal_protein_S9 EB814_21520 QGJ24730 4126558 4126986 - 50S_ribosomal_protein_L13 EB814_21525 QGJ24731 4127205 4128332 - cell_division_protein_ZapE zapE QGJ24732 4128526 4128924 + DUF1043_family_protein EB814_21535 QGJ24733 4129078 4130445 + serine_endoprotease_DegQ degQ QGJ24734 4130535 4131602 + serine_endoprotease_DegS degS QGJ24735 4131666 4132604 - malate_dehydrogenase EB814_21550 QGJ24736 4133039 4133509 + transcriptional_regulator_ArgR argR QGJ24737 4133874 4134137 + peroxide/acid_stress_response_protein_YhcN yhcN QGJ24738 4134193 4134465 - hypothetical_protein EB814_21565 QGJ24739 4134557 4136524 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QGJ24740 4136530 4137459 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QGJ24741 4137467 4137670 - DUF1656_domain-containing_protein EB814_21580 QGJ24742 4137853 4138782 + HTH-type_transcriptional_activator_AaeR aaeR QGJ24743 4138916 4140361 - metalloprotease_TldD tldD QGJ24744 4140517 4144317 - AsmA2_domain-containing_protein EB814_21595 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QGJ24718 100 723 100.0 0.0 PJR32595.1 QGJ24719 100 318 100.0 6e-109 PJR32596.1 QGJ24720 100 570 100.0 0.0 PJR32597.1 QGJ24721 100 461 100.0 2e-162 PJR32598.1 QGJ24722 100 993 100.0 0.0 PJR32600.1 QGJ24724 100 537 100.0 0.0 >> 93. CP034384_0 Source: Escherichia coli O157:H7 strain FRIK804 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QHP64448 4178141 4179127 + arabinose_5-phosphate_isomerase_KdsD EJB16_21755 QHP64449 4179148 4179714 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC EJB16_21760 QHP64450 4179711 4180286 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHP64451 4180255 4180812 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHP64452 4180819 4181544 + ABC_transporter_ATP-binding_protein EJB16_21775 QHP64453 4181592 4183025 + RNA_polymerase_sigma-54_factor EJB16_21780 QHP64454 4183048 4183335 + ribosome_hibernation_promoting_factor EJB16_21785 QHP64455 4183453 4183944 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHP64456 4183990 4184844 + RNase_adaptor_protein_RapZ EJB16_21795 QHP64457 4184841 4185113 + phosphocarrier_protein_NPr EJB16_21800 QHP64458 4185327 4185959 + PhoP_regulatory_network_protein_YrbL yrbL QHP64459 4185956 4186684 - monofunctional_biosynthetic_peptidoglycan transglycosylase EJB16_21810 QHP64460 4186681 4187334 - isoprenoid_biosynthesis_protein_ElbB elbB QHP64461 4187564 4189900 - hybrid_sensor_histidine_kinase/response regulator EJB16_21820 QHP64462 4189996 4190925 - TIGR01212_family_radical_SAM_protein EJB16_21825 QHP64463 4191599 4196059 + glutamate_synthase_large_subunit EJB16_21830 QHP64464 4196072 4197490 + glutamate_synthase_small_subunit EJB16_21835 QHP64465 4197674 4198723 + DUF1016_domain-containing_protein EJB16_21840 QHP64466 4198783 4199247 - YhcH/YjgK/YiaL_family_protein EJB16_21845 QHP64467 4199244 4200119 - N-acetylmannosamine_kinase EJB16_21850 QHP64468 4200116 4200805 - N-acetylmannosamine-6-phosphate_2-epimerase EJB16_21855 QHP64469 4200853 4202343 - MFS_transporter EJB16_21860 QHP64470 4202452 4203345 - N-acetylneuraminate_lyase nanA QHP64471 4203467 4204258 - transcriptional_regulator_NanR EJB16_21870 QHP64472 4204638 4206002 + C4-dicarboxylate_transporter_DcuC dcuC QHP64473 4206037 4206534 - ClpXP_protease_specificity-enhancing_factor EJB16_21880 QHP64474 4206540 4207178 - stringent_starvation_protein_A EJB16_21885 QHP64475 4207434 4207655 + hypothetical_protein EJB16_21890 QHP64476 4207573 4207965 - 30S_ribosomal_protein_S9 EJB16_21895 QHP64477 4207981 4208409 - 50S_ribosomal_protein_L13 EJB16_21900 QHP64478 4208628 4209755 - cell_division_protein_ZapE zapE QHP64479 4209949 4210347 + DUF1043_family_protein EJB16_21910 QHP64480 4210501 4211868 + serine_endoprotease_DegQ degQ QHP64481 4211958 4213025 + outer_membrane-stress_sensor_serine endopeptidase DegS EJB16_21920 QHP64482 4213089 4214027 - malate_dehydrogenase EJB16_21925 QHP64483 4214462 4214932 + transcriptional_regulator_ArgR argR QHP64484 4215297 4215560 + DUF1471_domain-containing_protein EJB16_21935 QHP64485 4215616 4215888 - hypothetical_protein EJB16_21940 QHP64486 4215980 4217947 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHP64487 4217953 4218882 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHP64488 4218890 4219093 - DUF1656_domain-containing_protein EJB16_21955 QHP64489 4219276 4220205 + HTH-type_transcriptional_activator_AaeR aaeR QHP64490 4220339 4221784 - metalloprotease_TldD tldD QHP64491 4221940 4225740 - AsmA2_domain-containing_protein EJB16_21970 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHP64465 100 723 100.0 0.0 PJR32595.1 QHP64466 100 318 100.0 6e-109 PJR32596.1 QHP64467 100 570 100.0 0.0 PJR32597.1 QHP64468 100 461 100.0 2e-162 PJR32598.1 QHP64469 100 993 100.0 0.0 PJR32600.1 QHP64471 100 537 100.0 0.0 >> 94. CP032811_0 Source: Escherichia coli strain ERL03-1416 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QFH29168 608153 609598 + metalloprotease_TldD tldD QFH29169 609732 610661 - HTH-type_transcriptional_activator_AaeR aaeR QFH29170 610844 611047 + DUF1656_domain-containing_protein D8Z67_03140 QFH29171 611055 611984 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFH29172 611990 613957 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFH29173 614049 614321 + hypothetical_protein D8Z67_03155 QFH29174 614377 614640 - DUF1471_domain-containing_protein D8Z67_03160 QFH29175 615005 615475 - transcriptional_regulator_ArgR argR QFH29176 615910 616848 + malate_dehydrogenase D8Z67_03170 QFH29177 616912 617979 - outer_membrane-stress_sensor_serine endopeptidase DegS D8Z67_03175 QFH29178 618069 619436 - serine_endoprotease_DegQ degQ QFH29179 619590 619988 - DUF1043_family_protein D8Z67_03185 QFH29180 620182 621309 + cell_division_protein_ZapE zapE QFH29181 621528 621956 + 50S_ribosomal_protein_L13 D8Z67_03195 QFH29182 621972 622364 + 30S_ribosomal_protein_S9 D8Z67_03200 QFH29183 622282 622503 - hypothetical_protein D8Z67_03205 QFH29184 622759 623397 + stringent_starvation_protein_A D8Z67_03210 QFH29185 623403 623900 + stringent_starvation_protein_B D8Z67_03215 QFH29186 623935 625299 - C4-dicarboxylate_transporter_DcuC dcuC QFH29187 625679 626470 + transcriptional_regulator_NanR D8Z67_03225 QFH29188 626592 627485 + N-acetylneuraminate_lyase nanA QFH29189 627594 629084 + MFS_transporter D8Z67_03235 QFH29190 629132 629821 + N-acetylmannosamine-6-phosphate_2-epimerase D8Z67_03240 QFH29191 629818 630693 + ROK_family_protein D8Z67_03245 QFH29192 630690 631154 + YhcH/YjgK/YiaL_family_protein D8Z67_03250 QFH29193 631214 632263 - DUF1016_domain-containing_protein D8Z67_03255 QFH29194 632447 633865 - glutamate_synthase_small_subunit D8Z67_03260 QFH29195 633878 638338 - glutamate_synthase_large_subunit D8Z67_03265 QFH33589 639012 639941 + TIGR01212_family_radical_SAM_protein D8Z67_03270 QFH29196 640037 642373 + hybrid_sensor_histidine_kinase/response regulator D8Z67_03275 QFH29197 642603 643256 + isoprenoid_biosynthesis_protein_ElbB elbB QFH29198 643253 643981 + monofunctional_biosynthetic_peptidoglycan transglycosylase D8Z67_03285 QFH29199 643978 644610 - PhoP_regulatory_network_protein_YrbL yrbL QFH29200 644824 645096 - phosphocarrier_protein_NPr D8Z67_03295 QFH29201 645093 645947 - RNase_adaptor_protein_RapZ D8Z67_03300 QFH29202 645993 646484 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFH29203 646602 646889 - ribosome_hibernation_promoting_factor D8Z67_03310 QFH29204 646912 648345 - RNA_polymerase_sigma-54_factor D8Z67_03315 QFH29205 648393 649118 - ABC_transporter_ATP-binding_protein D8Z67_03320 QFH29206 649125 649682 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFH29207 649651 650226 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFH29208 650223 650789 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC D8Z67_03335 QFH29209 650810 651796 - arabinose_5-phosphate_isomerase_KdsD D8Z67_03340 QFH29210 651810 652787 - calcium/sodium_antiporter D8Z67_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QFH29193 100 723 100.0 0.0 PJR32595.1 QFH29192 100 318 100.0 6e-109 PJR32596.1 QFH29191 100 570 100.0 0.0 PJR32597.1 QFH29190 100 461 100.0 2e-162 PJR32598.1 QFH29189 100 993 100.0 0.0 PJR32600.1 QFH29187 100 537 100.0 0.0 >> 95. CP032805_0 Source: Escherichia coli strain ERL05-0623 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QFH18347 592190 593635 + metalloprotease_TldD tldD QFH18348 593769 594698 - HTH-type_transcriptional_activator_AaeR aaeR QFH18349 594881 595084 + DUF1656_domain-containing_protein D8Z69_03055 QFH18350 595092 596021 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFH18351 596027 597994 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFH18352 598086 598358 + hypothetical_protein D8Z69_03070 QFH18353 598414 598677 - DUF1471_domain-containing_protein D8Z69_03075 QFH18354 599042 599512 - transcriptional_regulator_ArgR argR QFH18355 599947 600885 + malate_dehydrogenase D8Z69_03085 QFH18356 600949 602016 - outer_membrane-stress_sensor_serine endopeptidase DegS D8Z69_03090 QFH18357 602106 603473 - serine_endoprotease_DegQ degQ QFH18358 603627 604025 - DUF1043_family_protein D8Z69_03100 QFH18359 604219 605346 + cell_division_protein_ZapE zapE QFH18360 605565 605993 + 50S_ribosomal_protein_L13 D8Z69_03110 QFH18361 606009 606401 + 30S_ribosomal_protein_S9 D8Z69_03115 QFH18362 606319 606540 - hypothetical_protein D8Z69_03120 QFH18363 606796 607434 + stringent_starvation_protein_A D8Z69_03125 QFH18364 607440 607937 + stringent_starvation_protein_B D8Z69_03130 QFH18365 607972 609336 - C4-dicarboxylate_transporter_DcuC dcuC QFH18366 609716 610507 + transcriptional_regulator_NanR D8Z69_03140 QFH18367 610629 611522 + N-acetylneuraminate_lyase nanA QFH18368 611631 613121 + MFS_transporter D8Z69_03150 QFH18369 613169 613858 + N-acetylmannosamine-6-phosphate_2-epimerase D8Z69_03155 QFH18370 613855 614730 + ROK_family_protein D8Z69_03160 QFH18371 614727 615191 + YhcH/YjgK/YiaL_family_protein D8Z69_03165 QFH18372 615251 616300 - DUF1016_domain-containing_protein D8Z69_03170 QFH18373 616484 617902 - glutamate_synthase_small_subunit D8Z69_03175 QFH18374 617915 622375 - glutamate_synthase_large_subunit D8Z69_03180 QFH22746 623049 623978 + TIGR01212_family_radical_SAM_protein D8Z69_03185 QFH18375 624074 626410 + hybrid_sensor_histidine_kinase/response regulator D8Z69_03190 QFH18376 626640 627293 + isoprenoid_biosynthesis_protein_ElbB elbB QFH18377 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase D8Z69_03200 QFH18378 628015 628647 - PhoP_regulatory_network_protein_YrbL yrbL QFH18379 628861 629133 - phosphocarrier_protein_NPr D8Z69_03210 QFH18380 629130 629984 - RNase_adaptor_protein_RapZ D8Z69_03215 QFH18381 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFH18382 630639 630926 - ribosome_hibernation_promoting_factor D8Z69_03225 QFH18383 630949 632382 - RNA_polymerase_sigma-54_factor D8Z69_03230 QFH18384 632430 633155 - ABC_transporter_ATP-binding_protein D8Z69_03235 QFH18385 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFH18386 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFH18387 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC D8Z69_03250 QFH18388 634847 635833 - arabinose_5-phosphate_isomerase_KdsD D8Z69_03255 QFH18389 635847 636824 - calcium/sodium_antiporter D8Z69_03260 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QFH18372 100 723 100.0 0.0 PJR32595.1 QFH18371 100 318 100.0 6e-109 PJR32596.1 QFH18370 100 570 100.0 0.0 PJR32597.1 QFH18369 100 461 100.0 2e-162 PJR32598.1 QFH18368 100 993 100.0 0.0 PJR32600.1 QFH18366 100 537 100.0 0.0 >> 96. CP032801_0 Source: Escherichia coli strain ERL06-2442 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QFH07504 608162 609607 + metalloprotease_TldD tldD QFH07505 609741 610670 - HTH-type_transcriptional_activator_AaeR aaeR QFH07506 610853 611056 + DUF1656_domain-containing_protein D8Z71_03145 QFH07507 611064 611993 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFH07508 611999 613966 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFH07509 614058 614330 + hypothetical_protein D8Z71_03160 QFH07510 614386 614649 - DUF1471_domain-containing_protein D8Z71_03165 QFH07511 615014 615484 - transcriptional_regulator_ArgR argR QFH07512 615919 616857 + malate_dehydrogenase D8Z71_03175 QFH07513 616921 617988 - outer_membrane-stress_sensor_serine endopeptidase DegS D8Z71_03180 QFH07514 618078 619445 - serine_endoprotease_DegQ degQ QFH07515 619599 619997 - DUF1043_family_protein D8Z71_03190 QFH07516 620191 621318 + cell_division_protein_ZapE zapE QFH07517 621537 621965 + 50S_ribosomal_protein_L13 D8Z71_03200 QFH07518 621981 622373 + 30S_ribosomal_protein_S9 D8Z71_03205 QFH07519 622291 622512 - hypothetical_protein D8Z71_03210 QFH07520 622768 623406 + stringent_starvation_protein_A D8Z71_03215 QFH07521 623412 623909 + stringent_starvation_protein_B D8Z71_03220 QFH07522 623944 625308 - C4-dicarboxylate_transporter_DcuC dcuC QFH07523 625688 626479 + transcriptional_regulator_NanR D8Z71_03230 QFH07524 626601 627494 + N-acetylneuraminate_lyase nanA QFH07525 627603 629093 + MFS_transporter D8Z71_03240 QFH07526 629141 629830 + N-acetylmannosamine-6-phosphate_2-epimerase D8Z71_03245 QFH07527 629827 630702 + ROK_family_protein D8Z71_03250 QFH07528 630699 631163 + YhcH/YjgK/YiaL_family_protein D8Z71_03255 QFH07529 631223 632272 - DUF1016_domain-containing_protein D8Z71_03260 QFH07530 632456 633874 - glutamate_synthase_small_subunit D8Z71_03265 QFH07531 633887 638347 - glutamate_synthase_large_subunit D8Z71_03270 QFH12041 639021 639950 + TIGR01212_family_radical_SAM_protein D8Z71_03275 QFH07532 640046 642382 + hybrid_sensor_histidine_kinase/response regulator D8Z71_03280 QFH07533 642612 643265 + isoprenoid_biosynthesis_protein_ElbB elbB QFH07534 643262 643990 + monofunctional_biosynthetic_peptidoglycan transglycosylase D8Z71_03290 QFH07535 643987 644619 - PhoP_regulatory_network_protein_YrbL yrbL QFH07536 644833 645105 - phosphocarrier_protein_NPr D8Z71_03300 QFH07537 645102 645956 - RNase_adaptor_protein_RapZ D8Z71_03305 QFH07538 646002 646493 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFH07539 646611 646898 - ribosome_hibernation_promoting_factor D8Z71_03315 QFH07540 646921 648354 - RNA_polymerase_sigma-54_factor D8Z71_03320 QFH07541 648402 649127 - ABC_transporter_ATP-binding_protein D8Z71_03325 QFH07542 649134 649691 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFH07543 649660 650235 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFH07544 650232 650798 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC D8Z71_03340 QFH07545 650819 651805 - arabinose_5-phosphate_isomerase_KdsD D8Z71_03345 QFH07546 651819 652796 - calcium/sodium_antiporter D8Z71_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QFH07529 100 723 100.0 0.0 PJR32595.1 QFH07528 100 318 100.0 6e-109 PJR32596.1 QFH07527 100 570 100.0 0.0 PJR32597.1 QFH07526 100 461 100.0 2e-162 PJR32598.1 QFH07525 100 993 100.0 0.0 PJR32600.1 QFH07523 100 537 100.0 0.0 >> 97. CP032797_0 Source: Escherichia coli strain ERL06-2497 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QFH01978 592191 593636 + metalloprotease_TldD tldD QFH01979 593770 594699 - HTH-type_transcriptional_activator_AaeR aaeR QFH01980 594882 595085 + DUF1656_domain-containing_protein D8Z72_03055 QFH01981 595093 596022 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFH01982 596028 597995 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFH01983 598087 598359 + hypothetical_protein D8Z72_03070 QFH06526 598415 598678 - DUF1471_domain-containing_protein D8Z72_03075 QFH01984 599043 599513 - transcriptional_regulator_ArgR argR QFH01985 599948 600886 + malate_dehydrogenase D8Z72_03085 QFH01986 600950 602017 - outer_membrane-stress_sensor_serine endopeptidase DegS D8Z72_03090 QFH01987 602107 603474 - serine_endoprotease_DegQ degQ QFH01988 603628 604026 - DUF1043_family_protein D8Z72_03100 QFH01989 604220 605347 + cell_division_protein_ZapE zapE QFH01990 605566 605994 + 50S_ribosomal_protein_L13 D8Z72_03110 QFH01991 606010 606402 + 30S_ribosomal_protein_S9 D8Z72_03115 QFH01992 606320 606541 - hypothetical_protein D8Z72_03120 QFH01993 606797 607435 + stringent_starvation_protein_A D8Z72_03125 QFH01994 607441 607938 + stringent_starvation_protein_B D8Z72_03130 QFH01995 607973 609337 - C4-dicarboxylate_transporter_DcuC dcuC QFH01996 609717 610508 + transcriptional_regulator_NanR D8Z72_03140 QFH01997 610630 611523 + N-acetylneuraminate_lyase nanA QFH01998 611632 613122 + MFS_transporter D8Z72_03150 QFH01999 613170 613859 + N-acetylmannosamine-6-phosphate_2-epimerase D8Z72_03155 QFH02000 613856 614731 + ROK_family_protein D8Z72_03160 QFH02001 614728 615192 + YhcH/YjgK/YiaL_family_protein D8Z72_03165 QFH02002 615252 616301 - DUF1016_domain-containing_protein D8Z72_03170 QFH02003 616485 617903 - glutamate_synthase_small_subunit D8Z72_03175 QFH02004 617916 622376 - glutamate_synthase_large_subunit D8Z72_03180 QFH06527 623050 623979 + TIGR01212_family_radical_SAM_protein D8Z72_03185 QFH02005 624075 626411 + hybrid_sensor_histidine_kinase/response regulator D8Z72_03190 QFH02006 626641 627294 + isoprenoid_biosynthesis_protein_ElbB elbB QFH02007 627291 628019 + monofunctional_biosynthetic_peptidoglycan transglycosylase D8Z72_03200 QFH02008 628016 628648 - PhoP_regulatory_network_protein_YrbL yrbL QFH02009 628862 629134 - phosphocarrier_protein_NPr D8Z72_03210 QFH02010 629131 629985 - RNase_adaptor_protein_RapZ D8Z72_03215 QFH02011 630031 630522 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFH02012 630640 630927 - ribosome_hibernation_promoting_factor D8Z72_03225 QFH02013 630950 632383 - RNA_polymerase_sigma-54_factor D8Z72_03230 QFH02014 632431 633156 - ABC_transporter_ATP-binding_protein D8Z72_03235 QFH02015 633163 633720 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFH02016 633689 634264 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFH02017 634261 634827 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC D8Z72_03250 QFH02018 634848 635834 - arabinose_5-phosphate_isomerase_KdsD D8Z72_03255 QFH02019 635848 636825 - calcium/sodium_antiporter D8Z72_03260 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QFH02002 100 723 100.0 0.0 PJR32595.1 QFH02001 100 318 100.0 6e-109 PJR32596.1 QFH02000 100 570 100.0 0.0 PJR32597.1 QFH01999 100 461 100.0 2e-162 PJR32598.1 QFH01998 100 993 100.0 0.0 PJR32600.1 QFH01996 100 537 100.0 0.0 >> 98. CP032795_0 Source: Escherichia coli strain ERL06-2503 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QFG96540 608153 609598 + metalloprotease_TldD tldD QFG96541 609732 610661 - HTH-type_transcriptional_activator_AaeR aaeR QFG96542 610844 611047 + DUF1656_domain-containing_protein D8Z73_03140 QFG96543 611055 611984 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFG96544 611990 613957 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFG96545 614049 614321 + hypothetical_protein D8Z73_03155 QFG96546 614377 614640 - DUF1471_domain-containing_protein D8Z73_03160 QFG96547 615005 615475 - transcriptional_regulator_ArgR argR QFG96548 615910 616848 + malate_dehydrogenase D8Z73_03170 QFG96549 616912 617979 - outer_membrane-stress_sensor_serine endopeptidase DegS D8Z73_03175 QFG96550 618069 619436 - serine_endoprotease_DegQ degQ QFG96551 619590 619988 - DUF1043_family_protein D8Z73_03185 QFG96552 620182 621309 + cell_division_protein_ZapE zapE QFG96553 621528 621956 + 50S_ribosomal_protein_L13 D8Z73_03195 QFG96554 621972 622364 + 30S_ribosomal_protein_S9 D8Z73_03200 QFG96555 622282 622503 - hypothetical_protein D8Z73_03205 QFG96556 622759 623397 + stringent_starvation_protein_A D8Z73_03210 QFG96557 623403 623900 + stringent_starvation_protein_B D8Z73_03215 QFG96558 623935 625299 - C4-dicarboxylate_transporter_DcuC dcuC QFG96559 625679 626470 + transcriptional_regulator_NanR D8Z73_03225 QFG96560 626592 627485 + N-acetylneuraminate_lyase nanA QFG96561 627594 629084 + MFS_transporter D8Z73_03235 QFG96562 629132 629821 + N-acetylmannosamine-6-phosphate_2-epimerase D8Z73_03240 QFG96563 629818 630693 + ROK_family_protein D8Z73_03245 QFG96564 630690 631154 + YhcH/YjgK/YiaL_family_protein D8Z73_03250 QFG96565 631214 632263 - DUF1016_domain-containing_protein D8Z73_03255 QFG96566 632447 633865 - glutamate_synthase_small_subunit D8Z73_03260 QFG96567 633878 638338 - glutamate_synthase_large_subunit D8Z73_03265 QFH01122 639012 639941 + TIGR01212_family_radical_SAM_protein D8Z73_03270 QFG96568 640037 642373 + hybrid_sensor_histidine_kinase/response regulator D8Z73_03275 QFG96569 642603 643256 + isoprenoid_biosynthesis_protein_ElbB elbB QFG96570 643253 643981 + monofunctional_biosynthetic_peptidoglycan transglycosylase D8Z73_03285 QFG96571 643978 644610 - PhoP_regulatory_network_protein_YrbL yrbL QFG96572 644824 645096 - phosphocarrier_protein_NPr D8Z73_03295 QFG96573 645093 645947 - RNase_adaptor_protein_RapZ D8Z73_03300 QFG96574 645993 646484 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFG96575 646602 646889 - ribosome_hibernation_promoting_factor D8Z73_03310 QFG96576 646912 648345 - RNA_polymerase_sigma-54_factor D8Z73_03315 QFG96577 648393 649118 - ABC_transporter_ATP-binding_protein D8Z73_03320 QFG96578 649125 649682 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFG96579 649651 650226 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFG96580 650223 650789 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC D8Z73_03335 QFG96581 650810 651796 - arabinose_5-phosphate_isomerase_KdsD D8Z73_03340 QFG96582 651810 652787 - calcium/sodium_antiporter D8Z73_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QFG96565 100 723 100.0 0.0 PJR32595.1 QFG96564 100 318 100.0 6e-109 PJR32596.1 QFG96563 100 570 100.0 0.0 PJR32597.1 QFG96562 100 461 100.0 2e-162 PJR32598.1 QFG96561 100 993 100.0 0.0 PJR32600.1 QFG96559 100 537 100.0 0.0 >> 99. CP031913_0 Source: Escherichia coli O157:H7 strain FWSEC0004 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QCH80901 542704 544149 + metalloprotease_TldD tldD QCH80902 544283 545212 - HTH-type_transcriptional_activator_AaeR aaeR QCH80903 545395 545598 + DUF1656_domain-containing_protein CAM50_0002885 QCH80904 545606 546535 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCH80905 546541 548508 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCH80906 548600 548872 + hypothetical_protein CAM50_0002900 QCH80907 548928 549191 - DUF1471_domain-containing_protein CAM50_0002905 QCH80908 549556 550026 - transcriptional_regulator_ArgR argR QCH80909 550461 551399 + malate_dehydrogenase CAM50_0002915 QCH80910 551463 552530 - outer_membrane-stress_sensor_serine endopeptidase DegS CAM50_0002920 QCH80911 552620 553987 - serine_endoprotease_DegQ degQ QCH80912 554141 554539 - DUF1043_family_protein CAM50_0002930 QCH80913 554733 555860 + cell_division_protein_ZapE zapE QCH80914 556079 556507 + 50S_ribosomal_protein_L13 CAM50_0002940 QCH80915 556523 556915 + 30S_ribosomal_protein_S9 CAM50_0002945 QCH80916 556833 557054 - hypothetical_protein CAM50_0002950 QCH85465 557028 557207 + hypothetical_protein CAM50_0002955 QCH85464 557159 557368 - hypothetical_protein CAM50_0002960 QCH80917 557310 557948 + stringent_starvation_protein_A CAM50_0002965 QCH80918 557954 558451 + stringent_starvation_protein_B CAM50_0002970 QCH80919 558486 559850 - C4-dicarboxylate_transporter_DcuC dcuC CAM50_0002980 559850 559960 + transposase no_locus_tag QCH80920 560230 561021 + transcriptional_regulator_NanR CAM50_0002985 QCH80921 561143 562036 + N-acetylneuraminate_lyase nanA QCH80922 562145 563635 + MFS_transporter CAM50_0002995 QCH80923 563683 564372 + N-acetylmannosamine-6-phosphate_2-epimerase CAM50_0003000 QCH80924 564369 565244 + ROK_family_protein CAM50_0003005 QCH80925 565241 565705 + YhcH/YjgK/YiaL_family_protein CAM50_0003010 QCH80926 565765 566814 - DUF1016_domain-containing_protein CAM50_0003015 QCH80927 566998 568416 - glutamate_synthase_small_subunit CAM50_0003020 QCH80928 568429 572889 - glutamate_synthase_large_subunit CAM50_0003025 CAM50_0003030 572812 573038 + hypothetical_protein no_locus_tag QCH80929 572936 573172 + hypothetical_protein CAM50_0003035 QCH85466 573563 574492 + TIGR01212_family_radical_SAM_protein CAM50_0003040 QCH80930 574588 576924 + hybrid_sensor_histidine_kinase/response regulator CAM50_0003045 QCH80931 577154 577807 + isoprenoid_biosynthesis_protein_ElbB elbB QCH80932 577804 578532 + monofunctional_biosynthetic_peptidoglycan transglycosylase CAM50_0003055 QCH80933 578529 579161 - PhoP_regulatory_network_protein_YrbL yrbL QCH80934 579375 579647 - phosphocarrier_protein_NPr CAM50_0003065 QCH80935 579644 580498 - RNase_adaptor_protein_RapZ CAM50_0003070 QCH80936 580544 581035 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QCH80937 581153 581440 - ribosome_hibernation_promoting_factor CAM50_0003080 QCH80938 581463 582896 - RNA_polymerase_sigma-54_factor CAM50_0003085 QCH80939 582944 583669 - ABC_transporter_ATP-binding_protein CAM50_0003090 QCH80940 583676 584233 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QCH80941 584202 584777 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCH80942 584774 585340 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC CAM50_0003105 QCH80943 585361 586347 - arabinose_5-phosphate_isomerase_KdsD CAM50_0003110 QCH80944 586361 587338 - calcium/sodium_antiporter CAM50_0003115 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCH80926 100 723 100.0 0.0 PJR32595.1 QCH80925 100 318 100.0 6e-109 PJR32596.1 QCH80924 100 570 100.0 0.0 PJR32597.1 QCH80923 100 461 100.0 2e-162 PJR32598.1 QCH80922 100 993 100.0 0.0 PJR32600.1 QCH80920 100 537 100.0 0.0 >> 100. CP028609_0 Source: Escherichia coli strain 142 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QCL51937 592207 593652 + metalloprotease_TldD C9E66_03110 QCL51938 593786 594715 - HTH-type_transcriptional_activator_AaeR C9E66_03115 QCL51939 594898 595101 + protein_AaeX C9E66_03120 QCL51940 595109 596038 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E66_03125 QCL51941 596044 598011 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E66_03130 QCL51942 598103 598375 + hypothetical_protein C9E66_03135 QCL51943 598431 598694 - DUF1471_domain-containing_protein C9E66_03140 QCL51944 599059 599529 - arginine_repressor C9E66_03145 QCL51945 599964 600902 + malate_dehydrogenase C9E66_03150 QCL51946 600966 602033 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E66_03155 QCL51947 602123 603490 - serine_endoprotease_DegQ C9E66_03160 QCL51948 603644 604042 - hypothetical_protein C9E66_03165 QCL51949 604236 605363 + cell_division_protein_ZapE C9E66_03170 QCL51950 605582 606010 + 50S_ribosomal_protein_L13 C9E66_03175 QCL51951 606026 606418 + 30S_ribosomal_protein_S9 C9E66_03180 QCL51952 606336 606557 - hypothetical_protein C9E66_03185 QCL56488 606531 606710 + hypothetical_protein C9E66_03190 QCL56487 606662 606871 - hypothetical_protein C9E66_03195 QCL51953 606813 607451 + stringent_starvation_protein_A C9E66_03200 QCL51954 607457 607954 + stringent_starvation_protein_B C9E66_03205 QCL51955 607989 609353 - C4-dicarboxylate_ABC_transporter C9E66_03210 C9E66_03215 609353 609463 + transposase no_locus_tag QCL51956 609733 610524 + transcriptional_regulator_NanR nanR QCL51957 610646 611539 + N-acetylneuraminate_lyase nanA QCL51958 611648 613138 + MFS_transporter C9E66_03230 QCL51959 613186 613875 + N-acetylmannosamine-6-phosphate_2-epimerase C9E66_03235 QCL51960 613872 614747 + N-acetylmannosamine_kinase C9E66_03240 QCL51961 614744 615208 + YhcH/YjgK/YiaL_family_protein C9E66_03245 QCL51962 615268 616317 - DUF1016_domain-containing_protein C9E66_03250 QCL51963 616501 617919 - glutamate_synthase_small_subunit C9E66_03255 QCL51964 617932 622392 - glutamate_synthase_large_subunit C9E66_03260 C9E66_03265 622315 622541 + hypothetical_protein no_locus_tag QCL51965 622439 622675 + hypothetical_protein C9E66_03270 QCL56489 623066 623995 + TIGR01212_family_radical_SAM_protein C9E66_03275 QCL51966 624091 626427 + hybrid_sensor_histidine_kinase/response regulator C9E66_03280 QCL51967 626657 627310 + isoprenoid_biosynthesis_protein_ElbB C9E66_03285 QCL51968 627307 628035 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E66_03290 QCL51969 628032 628664 - protein_YrbL yrbL QCL51970 628878 629150 - phosphocarrier_protein_NPr C9E66_03300 QCL51971 629147 630001 - RNase_adaptor_protein_RapZ C9E66_03305 QCL51972 630047 630538 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E66_03310 QCL51973 630656 630943 - ribosome_hibernation_promoting_factor C9E66_03315 QCL51974 630966 632399 - RNA_polymerase_sigma-54_factor C9E66_03320 QCL51975 632447 633172 - ABC_transporter_ATP-binding_protein C9E66_03325 QCL51976 633179 633736 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E66_03330 QCL51977 633705 634280 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCL51978 634277 634843 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCL51979 634864 635850 - arabinose_5-phosphate_isomerase_KdsD C9E66_03345 QCL51980 635864 636841 - calcium/sodium_antiporter C9E66_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCL51962 100 723 100.0 0.0 PJR32595.1 QCL51961 100 318 100.0 6e-109 PJR32596.1 QCL51960 100 570 100.0 0.0 PJR32597.1 QCL51959 100 461 100.0 2e-162 PJR32598.1 QCL51958 100 993 100.0 0.0 PJR32600.1 QCL51956 100 537 100.0 0.0 >> 101. CP028607_0 Source: Escherichia coli strain 143 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QCL46272 592191 593636 + metalloprotease_TldD C9E67_03110 QCL46273 593770 594699 - HTH-type_transcriptional_activator_AaeR C9E67_03115 QCL46274 594882 595085 + protein_AaeX C9E67_03120 QCL46275 595093 596022 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E67_03125 QCL46276 596028 597995 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E67_03130 QCL46277 598087 598359 + hypothetical_protein C9E67_03135 QCL46278 598415 598678 - DUF1471_domain-containing_protein C9E67_03140 QCL46279 599043 599513 - arginine_repressor C9E67_03145 QCL46280 599948 600886 + malate_dehydrogenase C9E67_03150 QCL46281 600950 602017 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E67_03155 QCL46282 602107 603474 - serine_endoprotease_DegQ C9E67_03160 QCL46283 603628 604026 - hypothetical_protein C9E67_03165 QCL46284 604220 605347 + cell_division_protein_ZapE C9E67_03170 QCL46285 605566 605994 + 50S_ribosomal_protein_L13 C9E67_03175 QCL46286 606010 606402 + 30S_ribosomal_protein_S9 C9E67_03180 QCL46287 606320 606541 - hypothetical_protein C9E67_03185 QCL51018 606515 606694 + hypothetical_protein C9E67_03190 QCL51017 606646 606855 - hypothetical_protein C9E67_03195 QCL46288 606797 607435 + stringent_starvation_protein_A C9E67_03200 QCL46289 607441 607938 + stringent_starvation_protein_B C9E67_03205 QCL46290 607973 609337 - C4-dicarboxylate_ABC_transporter C9E67_03210 C9E67_03215 609337 609447 + transposase no_locus_tag QCL46291 609717 610508 + transcriptional_regulator_NanR nanR QCL46292 610630 611523 + N-acetylneuraminate_lyase nanA QCL46293 611632 613122 + MFS_transporter C9E67_03230 QCL46294 613170 613859 + N-acetylmannosamine-6-phosphate_2-epimerase C9E67_03235 QCL46295 613856 614731 + N-acetylmannosamine_kinase C9E67_03240 QCL46296 614728 615192 + YhcH/YjgK/YiaL_family_protein C9E67_03245 QCL46297 615252 616301 - DUF1016_domain-containing_protein C9E67_03250 QCL46298 616485 617903 - glutamate_synthase_small_subunit C9E67_03255 QCL46299 617916 622376 - glutamate_synthase_large_subunit C9E67_03260 C9E67_03265 622299 622525 + hypothetical_protein no_locus_tag QCL46300 622423 622659 + hypothetical_protein C9E67_03270 QCL51019 623050 623979 + TIGR01212_family_radical_SAM_protein C9E67_03275 QCL46301 624075 626411 + hybrid_sensor_histidine_kinase/response regulator C9E67_03280 QCL46302 626641 627294 + isoprenoid_biosynthesis_protein_ElbB C9E67_03285 QCL46303 627291 628019 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E67_03290 QCL46304 628016 628648 - protein_YrbL yrbL QCL46305 628862 629134 - phosphocarrier_protein_NPr C9E67_03300 QCL46306 629131 629985 - RNase_adaptor_protein_RapZ C9E67_03305 QCL46307 630031 630522 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E67_03310 QCL46308 630640 630927 - ribosome_hibernation_promoting_factor C9E67_03315 QCL46309 630950 632383 - RNA_polymerase_sigma-54_factor C9E67_03320 QCL46310 632431 633156 - ABC_transporter_ATP-binding_protein C9E67_03325 QCL46311 633163 633720 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E67_03330 QCL46312 633689 634264 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCL46313 634261 634827 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCL46314 634848 635834 - arabinose_5-phosphate_isomerase_KdsD C9E67_03345 QCL46315 635848 636825 - calcium/sodium_antiporter C9E67_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCL46297 100 723 100.0 0.0 PJR32595.1 QCL46296 100 318 100.0 6e-109 PJR32596.1 QCL46295 100 570 100.0 0.0 PJR32597.1 QCL46294 100 461 100.0 2e-162 PJR32598.1 QCL46293 100 993 100.0 0.0 PJR32600.1 QCL46291 100 537 100.0 0.0 >> 102. CP028600_0 Source: Escherichia coli strain 147 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QCL35192 592209 593654 + metalloprotease_TldD C9E69_03110 QCL35193 593788 594717 - HTH-type_transcriptional_activator_AaeR C9E69_03115 QCL35194 594900 595103 + protein_AaeX C9E69_03120 QCL35195 595111 596040 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E69_03125 QCL35196 596046 598013 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E69_03130 QCL35197 598105 598377 + hypothetical_protein C9E69_03135 QCL35198 598433 598696 - DUF1471_domain-containing_protein C9E69_03140 QCL35199 599061 599531 - arginine_repressor C9E69_03145 QCL35200 599966 600904 + malate_dehydrogenase C9E69_03150 QCL35201 600968 602035 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E69_03155 QCL35202 602125 603492 - serine_endoprotease_DegQ C9E69_03160 QCL35203 603646 604044 - hypothetical_protein C9E69_03165 QCL35204 604238 605365 + cell_division_protein_ZapE C9E69_03170 QCL35205 605584 606012 + 50S_ribosomal_protein_L13 C9E69_03175 QCL35206 606028 606420 + 30S_ribosomal_protein_S9 C9E69_03180 QCL35207 606338 606559 - hypothetical_protein C9E69_03185 QCL39722 606533 606712 + hypothetical_protein C9E69_03190 QCL39721 606664 606873 - hypothetical_protein C9E69_03195 QCL35208 606815 607453 + stringent_starvation_protein_A C9E69_03200 QCL35209 607459 607956 + stringent_starvation_protein_B C9E69_03205 QCL35210 607991 609355 - C4-dicarboxylate_ABC_transporter C9E69_03210 C9E69_03215 609355 609465 + transposase no_locus_tag QCL35211 609735 610526 + transcriptional_regulator_NanR nanR QCL35212 610648 611541 + N-acetylneuraminate_lyase nanA QCL35213 611650 613140 + MFS_transporter C9E69_03230 QCL35214 613188 613877 + N-acetylmannosamine-6-phosphate_2-epimerase C9E69_03235 QCL35215 613874 614749 + N-acetylmannosamine_kinase C9E69_03240 QCL35216 614746 615210 + YhcH/YjgK/YiaL_family_protein C9E69_03245 QCL35217 615270 616319 - DUF1016_domain-containing_protein C9E69_03250 QCL35218 616503 617921 - glutamate_synthase_small_subunit C9E69_03255 QCL35219 617934 622394 - glutamate_synthase_large_subunit C9E69_03260 C9E69_03265 622317 622543 + hypothetical_protein no_locus_tag QCL35220 622441 622677 + hypothetical_protein C9E69_03270 QCL39723 623068 623997 + TIGR01212_family_radical_SAM_protein C9E69_03275 QCL35221 624093 626429 + hybrid_sensor_histidine_kinase/response regulator C9E69_03280 QCL35222 626659 627312 + isoprenoid_biosynthesis_protein_ElbB C9E69_03285 QCL35223 627309 628037 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E69_03290 QCL35224 628034 628666 - protein_YrbL yrbL QCL35225 628880 629152 - phosphocarrier_protein_NPr C9E69_03300 QCL35226 629149 630003 - RNase_adaptor_protein_RapZ C9E69_03305 QCL35227 630049 630540 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E69_03310 QCL35228 630658 630945 - ribosome_hibernation_promoting_factor C9E69_03315 QCL35229 630968 632401 - RNA_polymerase_sigma-54_factor C9E69_03320 QCL35230 632449 633174 - ABC_transporter_ATP-binding_protein C9E69_03325 QCL35231 633181 633738 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E69_03330 QCL35232 633707 634282 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCL35233 634279 634845 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCL35234 634866 635852 - arabinose_5-phosphate_isomerase_KdsD C9E69_03345 QCL35235 635866 636843 - calcium/sodium_antiporter C9E69_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCL35217 100 723 100.0 0.0 PJR32595.1 QCL35216 100 318 100.0 6e-109 PJR32596.1 QCL35215 100 570 100.0 0.0 PJR32597.1 QCL35214 100 461 100.0 2e-162 PJR32598.1 QCL35213 100 993 100.0 0.0 PJR32600.1 QCL35211 100 537 100.0 0.0 >> 103. CP028598_0 Source: Escherichia coli strain 148 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QCL29756 592209 593654 + metalloprotease_TldD C9E70_03105 QCL29757 593788 594717 - HTH-type_transcriptional_activator_AaeR C9E70_03110 QCL29758 594900 595103 + protein_AaeX C9E70_03115 QCL29759 595111 596040 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E70_03120 QCL29760 596046 598013 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E70_03125 QCL29761 598105 598377 + hypothetical_protein C9E70_03130 QCL29762 598433 598696 - DUF1471_domain-containing_protein C9E70_03135 QCL29763 599061 599531 - arginine_repressor C9E70_03140 QCL29764 599966 600904 + malate_dehydrogenase C9E70_03145 QCL29765 600968 602035 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E70_03150 QCL29766 602125 603492 - serine_endoprotease_DegQ C9E70_03155 QCL29767 603646 604044 - hypothetical_protein C9E70_03160 QCL29768 604238 605365 + cell_division_protein_ZapE C9E70_03165 QCL29769 605584 606012 + 50S_ribosomal_protein_L13 C9E70_03170 QCL29770 606028 606420 + 30S_ribosomal_protein_S9 C9E70_03175 QCL29771 606338 606559 - hypothetical_protein C9E70_03180 QCL34293 606533 606712 + hypothetical_protein C9E70_03185 QCL34292 606664 606873 - hypothetical_protein C9E70_03190 QCL29772 606815 607453 + stringent_starvation_protein_A C9E70_03195 QCL29773 607459 607956 + stringent_starvation_protein_B C9E70_03200 QCL29774 607991 609355 - C4-dicarboxylate_ABC_transporter C9E70_03205 C9E70_03210 609355 609465 + transposase no_locus_tag QCL29775 609735 610526 + transcriptional_regulator_NanR nanR QCL29776 610648 611541 + N-acetylneuraminate_lyase nanA QCL29777 611650 613140 + MFS_transporter C9E70_03225 QCL29778 613188 613877 + N-acetylmannosamine-6-phosphate_2-epimerase C9E70_03230 QCL29779 613874 614749 + N-acetylmannosamine_kinase C9E70_03235 QCL29780 614746 615210 + YhcH/YjgK/YiaL_family_protein C9E70_03240 QCL29781 615270 616319 - DUF1016_domain-containing_protein C9E70_03245 QCL29782 616503 617921 - glutamate_synthase_small_subunit C9E70_03250 QCL29783 617934 622394 - glutamate_synthase_large_subunit C9E70_03255 C9E70_03260 622317 622543 + hypothetical_protein no_locus_tag QCL29784 622441 622677 + hypothetical_protein C9E70_03265 QCL34294 623068 623997 + TIGR01212_family_radical_SAM_protein C9E70_03270 QCL29785 624093 626429 + hybrid_sensor_histidine_kinase/response regulator C9E70_03275 QCL29786 626659 627312 + isoprenoid_biosynthesis_protein_ElbB C9E70_03280 QCL29787 627309 628037 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E70_03285 QCL29788 628034 628666 - protein_YrbL yrbL QCL29789 628880 629152 - phosphocarrier_protein_NPr C9E70_03295 QCL29790 629149 630003 - RNase_adaptor_protein_RapZ C9E70_03300 QCL29791 630049 630540 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E70_03305 QCL29792 630658 630945 - ribosome_hibernation_promoting_factor C9E70_03310 QCL29793 630968 632401 - RNA_polymerase_sigma-54_factor C9E70_03315 QCL29794 632449 633174 - ABC_transporter_ATP-binding_protein C9E70_03320 QCL29795 633181 633738 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E70_03325 QCL29796 633707 634282 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCL29797 634279 634845 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCL29798 634866 635852 - arabinose_5-phosphate_isomerase_KdsD C9E70_03340 QCL29799 635866 636843 - calcium/sodium_antiporter C9E70_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCL29781 100 723 100.0 0.0 PJR32595.1 QCL29780 100 318 100.0 6e-109 PJR32596.1 QCL29779 100 570 100.0 0.0 PJR32597.1 QCL29778 100 461 100.0 2e-162 PJR32598.1 QCL29777 100 993 100.0 0.0 PJR32600.1 QCL29775 100 537 100.0 0.0 >> 104. CP028596_0 Source: Escherichia coli strain 149 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QCL24323 592209 593654 + metalloprotease_TldD C9E71_03105 QCL24324 593788 594717 - HTH-type_transcriptional_activator_AaeR C9E71_03110 QCL24325 594900 595103 + protein_AaeX C9E71_03115 QCL24326 595111 596040 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E71_03120 QCL24327 596046 598013 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E71_03125 QCL24328 598105 598377 + hypothetical_protein C9E71_03130 QCL24329 598433 598696 - DUF1471_domain-containing_protein C9E71_03135 QCL24330 599061 599531 - arginine_repressor C9E71_03140 QCL24331 599966 600904 + malate_dehydrogenase C9E71_03145 QCL24332 600968 602035 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E71_03150 QCL24333 602125 603492 - serine_endoprotease_DegQ C9E71_03155 QCL24334 603646 604044 - hypothetical_protein C9E71_03160 QCL24335 604238 605365 + cell_division_protein_ZapE C9E71_03165 QCL24336 605584 606012 + 50S_ribosomal_protein_L13 C9E71_03170 QCL24337 606028 606420 + 30S_ribosomal_protein_S9 C9E71_03175 QCL24338 606338 606559 - hypothetical_protein C9E71_03180 QCL28861 606533 606712 + hypothetical_protein C9E71_03185 QCL28860 606664 606873 - hypothetical_protein C9E71_03190 QCL24339 606815 607453 + stringent_starvation_protein_A C9E71_03195 QCL24340 607459 607956 + stringent_starvation_protein_B C9E71_03200 QCL24341 607991 609355 - C4-dicarboxylate_ABC_transporter C9E71_03205 C9E71_03210 609355 609465 + transposase no_locus_tag QCL24342 609735 610526 + transcriptional_regulator_NanR nanR QCL24343 610648 611541 + N-acetylneuraminate_lyase nanA QCL24344 611650 613140 + MFS_transporter C9E71_03225 QCL24345 613188 613877 + N-acetylmannosamine-6-phosphate_2-epimerase C9E71_03230 QCL24346 613874 614749 + N-acetylmannosamine_kinase C9E71_03235 QCL24347 614746 615210 + YhcH/YjgK/YiaL_family_protein C9E71_03240 QCL24348 615270 616319 - DUF1016_domain-containing_protein C9E71_03245 QCL24349 616503 617921 - glutamate_synthase_small_subunit C9E71_03250 QCL24350 617934 622394 - glutamate_synthase_large_subunit C9E71_03255 C9E71_03260 622317 622543 + hypothetical_protein no_locus_tag QCL24351 622441 622677 + hypothetical_protein C9E71_03265 QCL28862 623068 623997 + TIGR01212_family_radical_SAM_protein C9E71_03270 QCL24352 624093 626429 + hybrid_sensor_histidine_kinase/response regulator C9E71_03275 QCL24353 626659 627312 + isoprenoid_biosynthesis_protein_ElbB C9E71_03280 QCL24354 627309 628037 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E71_03285 QCL24355 628034 628666 - protein_YrbL yrbL QCL24356 628880 629152 - phosphocarrier_protein_NPr C9E71_03295 QCL24357 629149 630003 - RNase_adaptor_protein_RapZ C9E71_03300 QCL24358 630049 630540 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E71_03305 QCL24359 630658 630945 - ribosome_hibernation_promoting_factor C9E71_03310 QCL24360 630968 632401 - RNA_polymerase_sigma-54_factor C9E71_03315 QCL24361 632449 633174 - ABC_transporter_ATP-binding_protein C9E71_03320 QCL24362 633181 633738 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E71_03325 QCL24363 633707 634282 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCL24364 634279 634845 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCL24365 634866 635852 - arabinose_5-phosphate_isomerase_KdsD C9E71_03340 QCL24366 635866 636843 - calcium/sodium_antiporter C9E71_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCL24348 100 723 100.0 0.0 PJR32595.1 QCL24347 100 318 100.0 6e-109 PJR32596.1 QCL24346 100 570 100.0 0.0 PJR32597.1 QCL24345 100 461 100.0 2e-162 PJR32598.1 QCL24344 100 993 100.0 0.0 PJR32600.1 QCL24342 100 537 100.0 0.0 >> 105. CP022689_0 Source: Escherichia coli strain CDC#03-98 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: AST64328 2637653 2639098 + metalloprotease_TldD RM34_14065 AST64329 2639232 2640161 - HTH-type_transcriptional_activator_AaeR RM34_14070 AST64330 2640344 2640547 + protein_AaeX RM34_14075 AST64331 2640555 2641484 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA RM34_14080 AST64332 2641490 2643457 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB RM34_14085 AST64333 2643549 2643821 + hypothetical_protein RM34_14090 AST64334 2643877 2644140 - hypothetical_protein RM34_14095 AST64335 2644505 2644975 - arginine_repressor RM34_14100 AST64336 2645410 2646348 + malate_dehydrogenase RM34_14105 AST64337 2646413 2647480 - outer_membrane-stress_sensor_serine endopeptidase DegS RM34_14110 AST64338 2647570 2648937 - serine_endoprotease_DegQ RM34_14115 AST64339 2649091 2649489 - hypothetical_protein RM34_14120 AST64340 2649683 2650810 + cell_division_protein_ZapE RM34_14125 AST64341 2651029 2651457 + 50S_ribosomal_protein_L13 RM34_14130 AST64342 2651473 2651865 + 30S_ribosomal_protein_S9 RM34_14135 AST64343 2651783 2652004 - hypothetical_protein RM34_14140 AST67089 2651978 2652157 + hypothetical_protein RM34_14145 AST67088 2652109 2652318 - hypothetical_protein RM34_14150 AST64344 2652260 2652898 + stringent_starvation_protein_A RM34_14155 AST64345 2652904 2653401 + stringent_starvation_protein_B RM34_14160 RM34_14165 2653444 2654800 - C4-dicarboxylate_transporter no_locus_tag RM34_14170 2654800 2654910 + transposase no_locus_tag AST64346 2655180 2655971 + transcriptional_regulator_NanR RM34_14175 AST64347 2656093 2656986 + N-acetylneuraminate_lyase nanA AST64348 2657095 2658585 + MFS_transporter RM34_14185 AST64349 2658633 2659322 + N-acetylmannosamine-6-phosphate_2-epimerase RM34_14190 AST64350 2659319 2660194 + N-acetylmannosamine_kinase RM34_14195 AST64351 2660191 2660655 + YhcH/YjgK/YiaL_family_protein RM34_14200 AST64352 2660715 2661764 - DUF1016_domain-containing_protein RM34_14205 AST64353 2661948 2663366 - glutamate_synthase_small_subunit RM34_14210 AST64354 2663379 2667839 - glutamate_synthase RM34_14215 RM34_14220 2667762 2667988 + hypothetical_protein no_locus_tag AST64355 2667886 2668122 + hypothetical_protein RM34_14225 AST67090 2668513 2669442 + TIGR01212_family_radical_SAM_protein RM34_14230 AST64356 2669538 2671874 + hybrid_sensor_histidine_kinase/response regulator RM34_14235 AST64357 2672104 2672757 + isoprenoid_biosynthesis_protein_ElbB RM34_14240 AST64358 2672754 2673482 + monofunctional_biosynthetic_peptidoglycan transglycosylase RM34_14245 AST64359 2673479 2674111 - hypothetical_protein RM34_14250 AST64360 2674325 2674597 - phosphocarrier_protein_NPr RM34_14255 AST64361 2674594 2675448 - RNase_adaptor_protein_RapZ RM34_14260 AST64362 2675494 2675985 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN RM34_14265 AST64363 2676103 2676390 - ribosome_hibernation_promoting_factor raiA AST64364 2676413 2677846 - RNA_polymerase_sigma-54_factor RM34_14275 AST64365 2677894 2678619 - ABC_transporter_ATP-binding_protein lptB AST64366 2678626 2679183 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA RM34_14285 AST64367 2679152 2679727 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC AST64368 2679724 2680290 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC RM34_14295 AST64369 2680311 2681297 - arabinose_5-phosphate_isomerase_KdsD RM34_14300 AST64370 2681311 2682288 - calcium/sodium_antiporter RM34_14305 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AST64352 100 723 100.0 0.0 PJR32595.1 AST64351 100 318 100.0 6e-109 PJR32596.1 AST64350 100 570 100.0 0.0 PJR32597.1 AST64349 100 461 100.0 2e-162 PJR32598.1 AST64348 100 993 100.0 0.0 PJR32600.1 AST64346 100 537 100.0 0.0 >> 106. CP022050_0 Source: Escherichia coli O157 strain FDAARGOS_293 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: ASE48489 3064479 3065924 + metalloprotease_TldD CEP72_15985 ASE48490 3066058 3066987 - HTH-type_transcriptional_activator_AaeR CEP72_15990 ASE48491 3067170 3067373 + protein_AaeX CEP72_15995 ASE48492 3067381 3068310 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CEP72_16000 ASE48493 3068316 3070283 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CEP72_16005 ASE48494 3070375 3070647 + hypothetical_protein CEP72_16010 ASE48495 3070703 3070966 - DUF1471_domain-containing_protein CEP72_16015 ASE48496 3071331 3071801 - arginine_repressor CEP72_16020 ASE48497 3072236 3073174 + malate_dehydrogenase CEP72_16025 ASE48498 3073238 3074305 - outer_membrane-stress_sensor_serine endopeptidase DegS CEP72_16030 ASE48499 3074395 3075762 - serine_endoprotease_DegQ CEP72_16035 ASE48500 3075916 3076314 - hypothetical_protein CEP72_16040 ASE48501 3076508 3077635 + cell_division_protein_ZapE CEP72_16045 ASE48502 3077854 3078282 + 50S_ribosomal_protein_L13 CEP72_16050 ASE48503 3078298 3078690 + 30S_ribosomal_protein_S9 CEP72_16055 ASE48504 3078608 3078829 - hypothetical_protein CEP72_16060 ASE50997 3078803 3078982 + hypothetical_protein CEP72_16065 ASE50996 3078934 3079143 - hypothetical_protein CEP72_16070 ASE48505 3079085 3079723 + stringent_starvation_protein_A CEP72_16075 ASE48506 3079729 3080226 + stringent_starvation_protein_B CEP72_16080 AVJ53182 3080261 3081625 - C4-dicarboxylate_ABC_transporter CEP72_16085 CEP72_16090 3081625 3081735 + transposase no_locus_tag ASE48507 3082005 3082796 + transcriptional_regulator_NanR nanR ASE48508 3082918 3083811 + N-acetylneuraminate_lyase nanA ASE48509 3083920 3085410 + MFS_transporter CEP72_16105 ASE48510 3085458 3086147 + N-acetylmannosamine-6-phosphate_2-epimerase CEP72_16110 ASE48511 3086144 3087019 + N-acetylmannosamine_kinase CEP72_16115 ASE48512 3087016 3087480 + YhcH/YjgK/YiaL_family_protein CEP72_16120 ASE48513 3087540 3088589 - DUF1016_domain-containing_protein CEP72_16125 ASE48514 3088773 3090191 - glutamate_synthase_small_subunit CEP72_16130 ASE48515 3090204 3094664 - glutamate_synthase_large_subunit CEP72_16135 CEP72_16140 3094587 3094813 + hypothetical_protein no_locus_tag ASE48516 3094711 3094947 + hypothetical_protein CEP72_16145 ASE50998 3095338 3096267 + TIGR01212_family_radical_SAM_protein CEP72_16150 ASE48517 3096363 3098699 + hybrid_sensor_histidine_kinase/response regulator CEP72_16155 ASE48518 3098929 3099582 + isoprenoid_biosynthesis_protein_ElbB CEP72_16160 ASE48519 3099579 3100307 + monofunctional_biosynthetic_peptidoglycan transglycosylase CEP72_16165 ASE48520 3100304 3100936 - protein_YrbL yrbL ASE48521 3101150 3101422 - phosphocarrier_protein_NPr CEP72_16175 ASE48522 3101419 3102273 - RNase_adaptor_protein_RapZ CEP72_16180 ASE48523 3102319 3102810 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN CEP72_16185 ASE48524 3102928 3103215 - ribosome_hibernation_promoting_factor CEP72_16190 ASE48525 3103238 3104671 - RNA_polymerase_sigma-54_factor CEP72_16195 ASE48526 3104719 3105444 - ABC_transporter_ATP-binding_protein CEP72_16200 ASE48527 3105451 3106008 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA CEP72_16205 ASE48528 3105977 3106552 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC ASE48529 3106549 3107115 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC ASE48530 3107136 3108122 - arabinose-5-phosphate_isomerase_KdsD CEP72_16220 ASE48531 3108136 3109113 - calcium/sodium_antiporter CEP72_16225 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ASE48513 100 723 100.0 0.0 PJR32595.1 ASE48512 100 318 100.0 6e-109 PJR32596.1 ASE48511 100 570 100.0 0.0 PJR32597.1 ASE48510 100 461 100.0 2e-162 PJR32598.1 ASE48509 100 993 100.0 0.0 PJR32600.1 ASE48507 100 537 100.0 0.0 >> 107. CP017669_0 Source: Escherichia coli strain PA20, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: APA40389 1074002 1075447 + metalloprotease_TldD AU473_05500 APA40390 1075581 1076510 - transcriptional_regulator AU473_05505 APA44603 1076693 1076896 + transporter AU473_05510 APA40391 1076904 1077833 + efflux_transporter_periplasmic_adaptor_subunit AU473_05515 APA40392 1077839 1079806 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB AU473_05520 APA40393 1079898 1080170 + hypothetical_protein AU473_05525 APA40394 1080226 1080489 - hypothetical_protein AU473_05530 APA40395 1080854 1081324 - arginine_repressor AU473_05535 APA40396 1081759 1082697 + malate_dehydrogenase AU473_05540 APA40397 1082761 1083828 - outer_membrane-stress_sensor_serine endopeptidase DegS AU473_05545 APA40398 1083918 1085285 - serine_endoprotease_DegQ AU473_05550 APA40399 1085439 1085837 - hypothetical_protein AU473_05555 APA40400 1086031 1087158 + cell_division_protein_ZapE AU473_05560 APA40401 1087377 1087805 + 50S_ribosomal_protein_L13 AU473_05565 APA40402 1087821 1088213 + 30S_ribosomal_protein_S9 AU473_05570 APA40403 1088608 1089246 + stringent_starvation_protein_A sspA APA40404 1089252 1089749 + ClpXP_protease_specificity-enhancing_factor AU473_05580 APA40405 1089784 1091148 - C4-dicarboxylate_ABC_transporter AU473_05585 APA40406 1091528 1092319 + transcriptional_regulator_NanR AU473_05590 APA40407 1092441 1093334 + N-acetylneuraminate_lyase AU473_05595 APA40408 1093443 1094933 + MFS_transporter AU473_05600 APA40409 1094981 1095670 + N-acetylmannosamine-6-phosphate_2-epimerase AU473_05605 APA40410 1095667 1096542 + N-acetylmannosamine_kinase AU473_05610 APA40411 1096539 1097003 + hypothetical_protein AU473_05615 APA40412 1097063 1098112 - hypothetical_protein AU473_05620 APA40413 1098296 1099714 - glutamate_synthase AU473_05625 APA44604 1099727 1104187 - glutamate_synthase_large_subunit AU473_05630 APA44605 1104861 1105790 + TIGR01212_family_radical_SAM_protein AU473_05635 APA40414 1105886 1108222 + aerobic_respiration_two-component_sensor histidine kinase ArcB AU473_05640 APA40415 1108452 1109105 + isoprenoid_biosynthesis_protein_ElbB AU473_05645 APA40416 1109102 1109830 + monofunctional_biosynthetic_peptidoglycan transglycosylase AU473_05650 APA40417 1109827 1110459 - hypothetical_protein AU473_05655 APA40418 1110673 1110945 - phosphohistidinoprotein-hexose phosphotransferase AU473_05660 APA40419 1110942 1111796 - RNase_adaptor_protein_RapZ AU473_05665 APA40420 1111842 1112333 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN AU473_05670 APA40421 1112451 1112738 - ribosomal_subunit_interface_protein AU473_05675 APA40422 1112761 1114194 - RNA_polymerase_factor_sigma-54 AU473_05680 APA40423 1114242 1114967 - LPS_export_ABC_transporter_ATP-binding_protein AU473_05685 APA40424 1114974 1115531 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA AU473_05690 APA40425 1115500 1116075 - LPS_export_ABC_transporter_periplasmic_protein LptC AU473_05695 APA40426 1116072 1116638 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase AU473_05700 APA40427 1116659 1117645 - D-arabinose_5-phosphate_isomerase AU473_05705 APA40428 1117659 1118636 - calcium/sodium_antiporter AU473_05710 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APA40412 100 723 100.0 0.0 PJR32595.1 APA40411 100 318 100.0 6e-109 PJR32596.1 APA40410 100 570 100.0 0.0 PJR32597.1 APA40409 100 461 100.0 2e-162 PJR32598.1 APA40408 100 993 100.0 0.0 PJR32600.1 APA40406 100 537 100.0 0.0 >> 108. CP017251_0 Source: Escherichia coli strain NADC 5570/86-24/6564, complete sequence. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: AOX55854 542908 544353 + metalloprotease_TldD BHW77_02780 AOX55855 544487 545416 - transcriptional_regulator BHW77_02785 AOX60397 545599 545802 + transporter BHW77_02790 AOX55856 545810 546739 + efflux_transporter_periplasmic_adaptor_subunit BHW77_02795 AOX55857 546745 548712 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BHW77_02800 AOX55858 548804 549076 + hypothetical_protein BHW77_02805 AOX55859 549132 549395 - hypothetical_protein BHW77_02810 AOX55860 549760 550230 - arginine_repressor BHW77_02815 AOX55861 550665 551603 + malate_dehydrogenase BHW77_02820 AOX55862 551667 552734 - outer_membrane-stress_sensor_serine endopeptidase DegS BHW77_02825 AOX55863 552824 554191 - serine_endoprotease_DegQ BHW77_02830 AOX55864 554345 554743 - hypothetical_protein BHW77_02835 AOX55865 554937 556064 + cell_division_protein_ZapE BHW77_02840 AOX55866 556283 556711 + 50S_ribosomal_protein_L13 BHW77_02845 AOX55867 556727 557119 + 30S_ribosomal_protein_S9 BHW77_02850 AOX55868 557514 558152 + stringent_starvation_protein_A sspA AOX55869 558158 558655 + ClpXP_protease_specificity-enhancing_factor BHW77_02860 AOX55870 558690 560054 - C4-dicarboxylate_ABC_transporter BHW77_02865 AOX55871 560434 561225 + transcriptional_regulator_NanR BHW77_02870 AOX55872 561347 562240 + N-acetylneuraminate_lyase BHW77_02875 AOX55873 562349 563839 + sialic_acid_transporter BHW77_02880 AOX55874 563887 564576 + N-acetylmannosamine-6-phosphate_2-epimerase BHW77_02885 AOX55875 564573 565448 + N-acetylmannosamine_kinase BHW77_02890 AOX55876 565445 565909 + hypothetical_protein BHW77_02895 AOX55877 565969 567018 - hypothetical_protein BHW77_02900 AOX55878 567202 568620 - glutamate_synthase BHW77_02905 AOX60398 568633 573093 - glutamate_synthase_large_subunit BHW77_02910 AOX60399 573767 574696 + TIGR01212_family_radical_SAM_protein BHW77_02915 AOX55879 574792 577128 + aerobic_respiration_two-component_sensor histidine kinase ArcB BHW77_02920 AOX55880 577358 578011 + isoprenoid_biosynthesis_protein_ElbB BHW77_02925 AOX55881 578008 578736 + monofunctional_biosynthetic_peptidoglycan transglycosylase BHW77_02930 AOX55882 578733 579365 - hypothetical_protein BHW77_02935 AOX55883 579579 579851 - phosphohistidinoprotein-hexose phosphotransferase BHW77_02940 AOX55884 579848 580702 - RNase_adaptor_protein_RapZ BHW77_02945 AOX55885 580748 581239 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN BHW77_02950 AOX55886 581357 581644 - ribosomal_subunit_interface_protein BHW77_02955 AOX55887 581667 583100 - RNA_polymerase_factor_sigma-54 BHW77_02960 AOX55888 583148 583873 - LPS_export_ABC_transporter_ATP-binding_protein BHW77_02965 AOX55889 583880 584437 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA BHW77_02970 AOX55890 584406 584981 - LPS_export_ABC_transporter_periplasmic_protein LptC BHW77_02975 AOX55891 584978 585544 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BHW77_02980 AOX55892 585565 586551 - D-arabinose_5-phosphate_isomerase BHW77_02985 AOX55893 586565 587542 - calcium/sodium_antiporter BHW77_02990 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AOX55877 100 723 100.0 0.0 PJR32595.1 AOX55876 100 318 100.0 6e-109 PJR32596.1 AOX55875 100 570 100.0 0.0 PJR32597.1 AOX55874 100 461 100.0 2e-162 PJR32598.1 AOX55873 100 993 100.0 0.0 PJR32600.1 AOX55871 100 537 100.0 0.0 >> 109. CP017249_0 Source: Escherichia coli strain NADC 5570/86-24/6565 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: AOX50451 542867 544312 + metalloprotease_TldD BHW76_02780 AOX50452 544446 545375 - transcriptional_regulator BHW76_02785 AOX55005 545558 545761 + transporter BHW76_02790 AOX50453 545769 546698 + efflux_transporter_periplasmic_adaptor_subunit BHW76_02795 AOX50454 546704 548671 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BHW76_02800 AOX50455 548763 549035 + hypothetical_protein BHW76_02805 AOX50456 549091 549354 - hypothetical_protein BHW76_02810 AOX50457 549719 550189 - arginine_repressor BHW76_02815 AOX50458 550624 551562 + malate_dehydrogenase BHW76_02820 AOX50459 551626 552693 - outer_membrane-stress_sensor_serine endopeptidase DegS BHW76_02825 AOX50460 552783 554150 - serine_endoprotease_DegQ BHW76_02830 AOX50461 554304 554702 - hypothetical_protein BHW76_02835 AOX50462 554896 556023 + cell_division_protein_ZapE BHW76_02840 AOX50463 556242 556670 + 50S_ribosomal_protein_L13 BHW76_02845 AOX50464 556686 557078 + 30S_ribosomal_protein_S9 BHW76_02850 AOX50465 557473 558111 + stringent_starvation_protein_A sspA AOX50466 558117 558614 + ClpXP_protease_specificity-enhancing_factor BHW76_02860 AOX50467 558649 560013 - C4-dicarboxylate_ABC_transporter BHW76_02865 AOX50468 560393 561184 + transcriptional_regulator_NanR BHW76_02870 AOX50469 561306 562199 + N-acetylneuraminate_lyase BHW76_02875 AOX50470 562308 563798 + sialic_acid_transporter BHW76_02880 AOX50471 563846 564535 + N-acetylmannosamine-6-phosphate_2-epimerase BHW76_02885 AOX50472 564532 565407 + N-acetylmannosamine_kinase BHW76_02890 AOX50473 565404 565868 + hypothetical_protein BHW76_02895 AOX50474 565928 566977 - hypothetical_protein BHW76_02900 AOX50475 567161 568579 - glutamate_synthase BHW76_02905 AOX55006 568592 573052 - glutamate_synthase_large_subunit BHW76_02910 AOX55007 573726 574655 + TIGR01212_family_radical_SAM_protein BHW76_02915 AOX50476 574751 577087 + aerobic_respiration_two-component_sensor histidine kinase ArcB BHW76_02920 AOX50477 577317 577970 + isoprenoid_biosynthesis_protein_ElbB BHW76_02925 AOX50478 577967 578695 + monofunctional_biosynthetic_peptidoglycan transglycosylase BHW76_02930 AOX50479 578692 579324 - hypothetical_protein BHW76_02935 AOX50480 579538 579810 - phosphohistidinoprotein-hexose phosphotransferase BHW76_02940 AOX50481 579807 580661 - RNase_adaptor_protein_RapZ BHW76_02945 AOX50482 580707 581198 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN BHW76_02950 AOX50483 581316 581603 - ribosomal_subunit_interface_protein BHW76_02955 AOX50484 581626 583059 - RNA_polymerase_factor_sigma-54 BHW76_02960 AOX50485 583107 583832 - LPS_export_ABC_transporter_ATP-binding_protein BHW76_02965 AOX50486 583839 584396 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA BHW76_02970 AOX50487 584365 584940 - LPS_export_ABC_transporter_periplasmic_protein LptC BHW76_02975 AOX50488 584937 585503 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BHW76_02980 AOX50489 585524 586510 - D-arabinose_5-phosphate_isomerase BHW76_02985 AOX50490 586524 587501 - calcium/sodium_antiporter BHW76_02990 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AOX50474 100 723 100.0 0.0 PJR32595.1 AOX50473 100 318 100.0 6e-109 PJR32596.1 AOX50472 100 570 100.0 0.0 PJR32597.1 AOX50471 100 461 100.0 2e-162 PJR32598.1 AOX50470 100 993 100.0 0.0 PJR32600.1 AOX50468 100 537 100.0 0.0 >> 110. CP015855_0 Source: Escherichia coli strain EDL933-1 genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: AOD09652 1654834 1656279 + metalloprotease_TldD A7402_08165 AOD09653 1656413 1657342 - transcriptional_regulator A7402_08170 AOD13131 1657525 1657728 + transporter A7402_08175 AOD09654 1657736 1658665 + efflux_transporter_periplasmic_adaptor_subunit A7402_08180 A7402_08185 1658671 1660637 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB no_locus_tag AOD09655 1660729 1661001 + hypothetical_protein A7402_08190 AOD09656 1661056 1661319 - hypothetical_protein A7402_08195 AOD09657 1661684 1662154 - arginine_repressor A7402_08200 AOD09658 1662589 1663527 + malate_dehydrogenase A7402_08205 AOD09659 1663591 1664658 - outer_membrane-stress_sensor_serine endopeptidase DegS A7402_08210 AOD09660 1664748 1666115 - serine_endoprotease_DegQ A7402_08215 AOD09661 1666269 1666667 - hypothetical_protein A7402_08220 AOD09662 1666861 1667988 + hypothetical_protein A7402_08225 AOD09663 1668207 1668635 + 50S_ribosomal_protein_L13 A7402_08230 AOD09664 1668651 1669043 + 30S_ribosomal_protein_S9 A7402_08235 AOD09665 1669438 1670076 + stringent_starvation_protein_A sspA AOD09666 1670082 1670579 + ClpXP_protease_specificity-enhancing_factor A7402_08245 AOD09667 1670614 1671978 - C4-dicarboxylate_ABC_transporter A7402_08250 AOD09668 1672358 1673149 + transcriptional_regulator_NanR A7402_08255 AOD09669 1673271 1674164 + N-acetylneuraminate_lyase A7402_08260 AOD09670 1674273 1675763 + sialic_acid_transporter A7402_08265 AOD09671 1675811 1676500 + N-acetylmannosamine-6-phosphate_2-epimerase A7402_08270 AOD09672 1676497 1677372 + N-acetylmannosamine_kinase A7402_08275 AOD09673 1677369 1677833 + hypothetical_protein A7402_08280 AOD09674 1677893 1678942 - hypothetical_protein A7402_08285 AOD09675 1679126 1680544 - glutamate_synthase A7402_08290 AOD13132 1680557 1685017 - glutamate_synthase_large_subunit A7402_08295 AOD13133 1685691 1686620 + TIGR01212_family_radical_SAM_protein A7402_08300 AOD09676 1686716 1689052 + aerobic_respiration_two-component_sensor histidine kinase ArcB A7402_08305 A7402_08310 1689282 1689934 + isoprenoid_biosynthesis_protein_ElbB no_locus_tag AOD09677 1689931 1690659 + monofunctional_biosynthetic_peptidoglycan transglycosylase A7402_08315 AOD09678 1690656 1691288 - hypothetical_protein A7402_08320 AOD09679 1691501 1691773 - phosphohistidinoprotein-hexose phosphotransferase A7402_08325 AOD09680 1691770 1692624 - RNase_adaptor_protein_RapZ A7402_08330 AOD09681 1692670 1693161 - PTS_IIA-like_nitrogen-regulatory_protein_PtsN A7402_08335 AOD09682 1693279 1693566 - ribosomal_subunit_interface_protein A7402_08340 AOD09683 1693589 1695022 - RNA_polymerase_factor_sigma-54 A7402_08345 AOD09684 1695070 1695795 - LPS_export_ABC_transporter_ATP-binding_protein A7402_08350 AOD09685 1695802 1696359 - lipopolysaccharide_transport_periplasmic_protein LptA A7402_08355 AOD09686 1696328 1696903 - LPS_export_ABC_transporter_periplasmic_protein LptC A7402_08360 AOD09687 1696900 1697466 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase A7402_08365 AOD09688 1697487 1698473 - D-arabinose_5-phosphate_isomerase A7402_08370 AOD09689 1698487 1699464 - calcium/sodium_antiporter A7402_08375 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AOD09674 100 723 100.0 0.0 PJR32595.1 AOD09673 100 318 100.0 6e-109 PJR32596.1 AOD09672 100 570 100.0 0.0 PJR32597.1 AOD09671 100 461 100.0 2e-162 PJR32598.1 AOD09670 100 993 100.0 0.0 PJR32600.1 AOD09668 100 537 100.0 0.0 >> 111. CP015853_0 Source: Escherichia coli strain ATCC 43889 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: QDK08767 4057966 4059411 + metalloprotease_TldD A8714_20840 QDK08768 4059545 4060474 - transcriptional_regulator A8714_20845 QDK10384 4060657 4060860 + transporter A8714_20850 QDK08769 4060868 4061797 + efflux_transporter_periplasmic_adaptor_subunit A8714_20855 QDK08770 4061803 4063770 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB A8714_20860 QDK08771 4063862 4064134 + hypothetical_protein A8714_20865 QDK08772 4064190 4064453 - hypothetical_protein A8714_20870 QDK08773 4064818 4065288 - arginine_repressor A8714_20875 QDK08774 4065723 4066661 + malate_dehydrogenase A8714_20880 QDK08775 4066725 4067792 - outer_membrane-stress_sensor_serine endopeptidase DegS A8714_20885 QDK08776 4067882 4069117 - serine_endoprotease_DegQ A8714_20890 QDK08777 4069402 4069800 - hypothetical_protein A8714_20895 QDK08778 4069994 4071121 + hypothetical_protein A8714_20900 QDK08779 4071340 4071768 + 50S_ribosomal_protein_L13 A8714_20905 QDK08780 4071784 4072176 + 30S_ribosomal_protein_S9 A8714_20910 QDK08781 4072571 4073209 + stringent_starvation_protein_A sspA QDK08782 4073215 4073712 + ClpXP_protease_specificity-enhancing_factor A8714_20920 QDK08783 4073747 4075111 - C4-dicarboxylate_ABC_transporter A8714_20925 QDK08784 4075491 4076282 + transcriptional_regulator_NanR A8714_20930 QDK08785 4076404 4077297 + N-acetylneuraminate_lyase A8714_20935 QDK08786 4077406 4078896 + sialic_acid_transporter A8714_20940 QDK08787 4078944 4079633 + N-acetylmannosamine-6-phosphate_2-epimerase A8714_20945 QDK08788 4079630 4080505 + N-acetylmannosamine_kinase A8714_20950 QDK08789 4080502 4080966 + hypothetical_protein A8714_20955 QDK08790 4081026 4082075 - hypothetical_protein A8714_20960 QDK08791 4082259 4083677 - glutamate_synthase A8714_20965 QDK10385 4083690 4088150 - glutamate_synthase_large_subunit A8714_20970 QDK10386 4088824 4089753 + TIGR01212_family_radical_SAM_protein A8714_20975 QDK08792 4089849 4092185 + aerobic_respiration_two-component_sensor histidine kinase ArcB A8714_20980 QDK08793 4092414 4093067 + isoprenoid_biosynthesis_protein_ElbB A8714_20985 QDK08794 4093064 4093792 + monofunctional_biosynthetic_peptidoglycan transglycosylase A8714_20990 QDK08795 4093789 4094421 - hypothetical_protein A8714_20995 QDK08796 4094635 4094907 - phosphohistidinoprotein-hexose phosphotransferase A8714_21000 QDK08797 4094904 4095758 - RNase_adaptor_protein_RapZ A8714_21005 QDK08798 4095804 4096295 - PTS_IIA-like_nitrogen-regulatory_protein_PtsN A8714_21010 QDK08799 4096413 4096700 - ribosomal_subunit_interface_protein A8714_21015 QDK08800 4096723 4098156 - RNA_polymerase_factor_sigma-54 A8714_21020 QDK08801 4098204 4098929 - LPS_export_ABC_transporter_ATP-binding_protein A8714_21025 QDK08802 4098936 4099493 - lipopolysaccharide_transport_periplasmic_protein LptA A8714_21030 QDK08803 4099462 4100037 - LPS_export_ABC_transporter_periplasmic_protein LptC A8714_21035 QDK08804 4100034 4100600 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase A8714_21040 QDK08805 4100621 4101607 - D-arabinose_5-phosphate_isomerase A8714_21045 QDK08806 4101621 4102598 - calcium/sodium_antiporter A8714_21050 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QDK08790 100 723 100.0 0.0 PJR32595.1 QDK08789 100 318 100.0 6e-109 PJR32596.1 QDK08788 100 570 100.0 0.0 PJR32597.1 QDK08787 100 461 100.0 2e-162 PJR32598.1 QDK08786 100 993 100.0 0.0 PJR32600.1 QDK08784 100 537 100.0 0.0 >> 112. CP014314_0 Source: Escherichia coli O157:H7 strain JEONG-1266, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: AMG81478 5263804 5265249 + metalloprotease_TldD JEONG1266_27010 AMG81479 5265383 5266312 - transcriptional_regulator JEONG1266_27015 AMG81923 5266495 5266698 + transporter JEONG1266_27020 AMG81480 5266706 5267635 + efflux_transporter_periplasmic_adaptor_subunit JEONG1266_27025 AMG81481 5267641 5269608 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB JEONG1266_27030 AMG81482 5269700 5269972 + hypothetical_protein JEONG1266_27035 AMG81483 5270028 5270291 - hypothetical_protein JEONG1266_27040 AMG81484 5270656 5271126 - arginine_repressor JEONG1266_27045 AMG81485 5271561 5272499 + malate_dehydrogenase JEONG1266_27050 AMG81486 5272563 5273630 - outer_membrane-stress_sensor_serine endopeptidase DegS JEONG1266_27055 AMG81487 5273720 5275087 - serine_endoprotease_DegQ JEONG1266_27060 AMG81488 5275241 5275639 - hypothetical_protein JEONG1266_27065 AMG81489 5275833 5276960 + hypothetical_protein JEONG1266_27070 AMG81490 5277179 5277607 + 50S_ribosomal_protein_L13 JEONG1266_27075 AMG81491 5277623 5278015 + 30S_ribosomal_protein_S9 JEONG1266_27080 AMG81492 5278410 5279048 + stringent_starvation_protein_A sspA AMG81493 5279054 5279551 + ClpXP_protease_specificity-enhancing_factor JEONG1266_27090 AMG81494 5279586 5280950 - C4-dicarboxylate_ABC_transporter JEONG1266_27095 AMG81495 5281330 5282121 + transcriptional_regulator_NanR JEONG1266_27100 AMG81496 5282243 5283136 + N-acetylneuraminate_lyase JEONG1266_27105 AMG81497 5283245 5284735 + sialic_acid_transporter JEONG1266_27110 AMG81498 5284783 5285472 + N-acetylmannosamine-6-phosphate_2-epimerase JEONG1266_27115 AMG81499 5285469 5286344 + N-acetylmannosamine_kinase JEONG1266_27120 AMG81500 5286341 5286805 + hypothetical_protein JEONG1266_27125 AMG81501 5286865 5287914 - hypothetical_protein JEONG1266_27130 AMG81502 5288098 5289516 - glutamate_synthase JEONG1266_27135 AMG81924 5289529 5293989 - glutamate_synthase_large_subunit JEONG1266_27140 AMG81925 5294663 5295592 + TIGR01212_family_radical_SAM_protein JEONG1266_27145 AMG81503 5295688 5298024 + aerobic_respiration_two-component_sensor histidine kinase ArcB JEONG1266_27150 AMG81504 5298254 5298907 + isoprenoid_biosynthesis_protein_ElbB JEONG1266_27155 AMG81505 5298904 5299632 + monofunctional_biosynthetic_peptidoglycan transglycosylase JEONG1266_27160 AMG81506 5299629 5300261 - hypothetical_protein JEONG1266_27165 AMG81507 5300475 5300747 - phosphohistidinoprotein-hexose phosphotransferase JEONG1266_27170 AMG81508 5300744 5301598 - RNase_adaptor_protein_RapZ JEONG1266_27175 AMG81509 5301644 5302135 - PTS_IIA-like_nitrogen-regulatory_protein_PtsN JEONG1266_27180 AMG81510 5302253 5302540 - ribosomal_subunit_interface_protein JEONG1266_27185 AMG81511 5302563 5303996 - RNA_polymerase_factor_sigma-54 JEONG1266_27190 AMG81512 5304044 5304769 - LPS_export_ABC_transporter_ATP-binding_protein JEONG1266_27195 AMG81513 5304776 5305333 - lipopolysaccharide_transport_periplasmic_protein LptA JEONG1266_27200 AMG81514 5305302 5305877 - LPS_export_ABC_transporter_periplasmic_protein LptC JEONG1266_27205 AMG81515 5305874 5306440 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase JEONG1266_27210 AMG81516 5306461 5307447 - D-arabinose_5-phosphate_isomerase JEONG1266_27215 AMG81517 5307461 5308438 - calcium/sodium_antiporter JEONG1266_27220 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AMG81501 100 723 100.0 0.0 PJR32595.1 AMG81500 100 318 100.0 6e-109 PJR32596.1 AMG81499 100 570 100.0 0.0 PJR32597.1 AMG81498 100 461 100.0 2e-162 PJR32598.1 AMG81497 100 993 100.0 0.0 PJR32600.1 AMG81495 100 537 100.0 0.0 >> 113. CP001368_0 Source: Escherichia coli O157:H7 str. TW14359, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3602 Table of genes, locations, strands and annotations of subject cluster: ACT73907 4141427 4142413 + D-arabinose_5-phosphate_isomerase kdsD ACT73908 4142434 4143000 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC ACT73909 4142997 4143572 + conserved_protein yrbK ACT73910 4143541 4144098 + predicted_transporter_subunit: periplasmic-binding component of ABC superfamily yhbN ACT73911 4144105 4144830 + predicted_transporter_subunit:_ATP-binding component of ABC superfamily yhbG ACT73912 4144878 4146311 + RNA_polymerase,_sigma_54_(sigma_N)_factor rpoN ACT73913 4146334 4146621 + ribosomal_hibernation_promoting_factor hpf ACT73914 4146739 4147230 + sugar-specific_enzyme_IIA_component_of_PTS ptsN ACT73915 4147276 4148130 + predicted_protein_with_nucleoside_triphosphate hydrolase domain yhbJ ACT73916 4148127 4148399 + phosphohistidinoprotein-hexose npr ACT73917 4148613 4149245 + predicted_protein yrbL ACT73918 4149242 4149970 - biosynthetic_peptidoglycan_transglycosylase mtgA ACT73919 4149967 4150620 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB ACT73920 4150850 4153186 - hybrid_sensory_histidine_kinase_in_two-component regulatory system with ArcA arcB ACT73921 4153282 4154211 - predicted_Fe-S_oxidoreductase yhcC ACT73922 4154792 4159345 + glutamate_synthase,_large_subunit gltB ACT73923 4159358 4160776 + glutamate_synthase,_4Fe-4S_protein,_small subunit gltD ACT73924 4160960 4162009 + conserved_protein yhcG ACT73925 4162069 4162533 - conserved_protein yhcH ACT73926 4162530 4163405 - predicted_N-acetylmannosamine_kinase nanK ACT73927 4163402 4164091 - predicted_N-acetylmannosamine-6-P_epimerase nanE ACT73928 4164139 4165629 - sialic_acid_transporter nanT ACT73929 4165738 4166631 - N-acetylneuraminate_lyase nanA ACT73930 4166753 4167544 - DNA-binding_transcriptional_dual_regulator nanR ACT73931 4167924 4169288 + predicted_transporter dcuD ACT73932 4169323 4169820 - ClpXP_protease_specificity-enhancing_factor sspB ACT73933 4169826 4170464 - stringent_starvation_protein_A sspA ACT73934 4170859 4171251 - 30S_ribosomal_subunit_protein_S9 rpsI ACT73935 4171267 4171695 - 50S_ribosomal_subunit_protein_L13 rplM ACT73936 4171914 4173041 - conserved_protein_with_nucleoside_triphosphate hydrolase domain yhcM ACT73937 4173235 4173633 + conserved_protein yhcB ACT73938 4173787 4175154 + serine_endoprotease,_periplasmic degQ ACT73939 4175244 4176311 + serine_endoprotease,_periplasmic degS ACT73940 4176375 4177313 - malate_dehydrogenase,_NAD(P)-binding mdh ACT73941 4177748 4178218 + DNA-binding_transcriptional_regulatory_protein argR ACT73942 4178583 4178846 + conserved_protein yhcN ACT73943 4178902 4179174 - predicted_barnase_inhibitor yhcO ACT73944 4179266 4181233 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB ACT73945 4181239 4182168 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA ACT73946 4182176 4182379 - membrane_protein_of_efflux_system aaeX ACT73947 4182562 4183491 + transcriptional_regulator,_LysR_family aaeR ACT73948 4183625 4185070 - predicted_peptidase tldD ACT73949 4185226 4189026 - conserved_membrane_protein,_predicted transporter yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ACT73924 100 723 100.0 0.0 PJR32595.1 ACT73925 100 318 100.0 6e-109 PJR32596.1 ACT73926 100 570 100.0 0.0 PJR32597.1 ACT73927 100 461 100.0 2e-162 PJR32598.1 ACT73928 100 993 100.0 0.0 PJR32600.1 ACT73930 100 537 100.0 0.0 >> 114. CP028629_0 Source: Escherichia coli strain 136 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3588 Table of genes, locations, strands and annotations of subject cluster: QCM31432 592112 593557 + metalloprotease_TldD C9E60_03110 QCM31433 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E60_03115 QCM31434 594803 595006 + protein_AaeX C9E60_03120 QCM31435 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E60_03125 QCM31436 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E60_03130 QCM31437 598008 598280 + hypothetical_protein C9E60_03135 QCM31438 598336 598599 - DUF1471_domain-containing_protein C9E60_03140 QCM31439 598964 599434 - arginine_repressor C9E60_03145 QCM31440 599869 600807 + malate_dehydrogenase C9E60_03150 QCM31441 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E60_03155 QCM31442 602028 603395 - serine_endoprotease_DegQ C9E60_03160 QCM31443 603549 603947 - hypothetical_protein C9E60_03165 QCM31444 604141 605268 + cell_division_protein_ZapE C9E60_03170 QCM31445 605487 605915 + 50S_ribosomal_protein_L13 C9E60_03175 QCM31446 605931 606323 + 30S_ribosomal_protein_S9 C9E60_03180 QCM31447 606241 606462 - hypothetical_protein C9E60_03185 QCM35999 606436 606615 + hypothetical_protein C9E60_03190 QCM35998 606567 606776 - hypothetical_protein C9E60_03195 QCM31448 606718 607356 + stringent_starvation_protein_A C9E60_03200 QCM31449 607362 607859 + stringent_starvation_protein_B C9E60_03205 QCM31450 607894 609258 - C4-dicarboxylate_ABC_transporter C9E60_03210 C9E60_03215 609258 609368 + transposase no_locus_tag QCM31451 609638 610429 + transcriptional_regulator_NanR nanR QCM31452 610551 611444 + N-acetylneuraminate_lyase nanA QCM31453 611553 613043 + MFS_transporter C9E60_03230 QCM31454 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E60_03235 QCM31455 613777 614652 + N-acetylmannosamine_kinase C9E60_03240 QCM31456 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E60_03245 QCM31457 615173 616300 - DUF1016_domain-containing_protein C9E60_03250 QCM31458 616484 617902 - glutamate_synthase_small_subunit C9E60_03255 QCM31459 617915 622375 - glutamate_synthase_large_subunit C9E60_03260 C9E60_03265 622298 622524 + hypothetical_protein no_locus_tag QCM31460 622422 622658 + hypothetical_protein C9E60_03270 QCM36000 623049 623978 + TIGR01212_family_radical_SAM_protein C9E60_03275 QCM31461 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E60_03280 QCM31462 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E60_03285 QCM31463 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E60_03290 QCM31464 628015 628647 - protein_YrbL yrbL QCM31465 628861 629133 - phosphocarrier_protein_NPr C9E60_03300 QCM31466 629130 629984 - RNase_adaptor_protein_RapZ C9E60_03305 QCM31467 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E60_03310 QCM31468 630639 630926 - ribosome_hibernation_promoting_factor C9E60_03315 QCM31469 630949 632382 - RNA_polymerase_sigma-54_factor C9E60_03320 QCM31470 632430 633155 - ABC_transporter_ATP-binding_protein C9E60_03325 QCM31471 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E60_03330 QCM31472 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCM31473 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM31474 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E60_03345 QCM31475 635847 636824 - calcium/sodium_antiporter C9E60_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM31457 93 709 107.449856734 0.0 PJR32595.1 QCM31456 100 318 100.0 6e-109 PJR32596.1 QCM31455 100 570 100.0 0.0 PJR32597.1 QCM31454 100 461 100.0 2e-162 PJR32598.1 QCM31453 100 993 100.0 0.0 PJR32600.1 QCM31451 100 537 100.0 0.0 >> 115. CP028626_0 Source: Escherichia coli strain 137 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3588 Table of genes, locations, strands and annotations of subject cluster: QCM25941 592112 593557 + metalloprotease_TldD C9E61_03105 QCM25942 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E61_03110 QCM25943 594803 595006 + protein_AaeX C9E61_03115 QCM25944 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E61_03120 QCM25945 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E61_03125 QCM25946 598008 598280 + hypothetical_protein C9E61_03130 QCM25947 598336 598599 - DUF1471_domain-containing_protein C9E61_03135 QCM25948 598964 599434 - arginine_repressor C9E61_03140 QCM25949 599869 600807 + malate_dehydrogenase C9E61_03145 QCM25950 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E61_03150 QCM25951 602028 603395 - serine_endoprotease_DegQ C9E61_03155 QCM25952 603549 603947 - hypothetical_protein C9E61_03160 QCM25953 604141 605268 + cell_division_protein_ZapE C9E61_03165 QCM25954 605487 605915 + 50S_ribosomal_protein_L13 C9E61_03170 QCM25955 605931 606323 + 30S_ribosomal_protein_S9 C9E61_03175 QCM25956 606241 606462 - hypothetical_protein C9E61_03180 QCM30514 606436 606615 + hypothetical_protein C9E61_03185 QCM30513 606567 606776 - hypothetical_protein C9E61_03190 QCM25957 606718 607356 + stringent_starvation_protein_A C9E61_03195 QCM25958 607362 607859 + stringent_starvation_protein_B C9E61_03200 QCM25959 607894 609258 - C4-dicarboxylate_ABC_transporter C9E61_03205 C9E61_03210 609258 609368 + transposase no_locus_tag QCM25960 609638 610429 + transcriptional_regulator_NanR nanR QCM25961 610551 611444 + N-acetylneuraminate_lyase nanA QCM25962 611553 613043 + MFS_transporter C9E61_03225 QCM25963 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E61_03230 QCM25964 613777 614652 + N-acetylmannosamine_kinase C9E61_03235 QCM25965 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E61_03240 QCM25966 615173 616300 - DUF1016_domain-containing_protein C9E61_03245 QCM25967 616484 617902 - glutamate_synthase_small_subunit C9E61_03250 QCM25968 617915 622375 - glutamate_synthase_large_subunit C9E61_03255 C9E61_03260 622298 622524 + hypothetical_protein no_locus_tag QCM25969 622422 622658 + hypothetical_protein C9E61_03265 QCM30515 623049 623978 + TIGR01212_family_radical_SAM_protein C9E61_03270 QCM25970 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E61_03275 QCM25971 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E61_03280 QCM25972 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E61_03285 QCM25973 628015 628647 - protein_YrbL yrbL QCM25974 628861 629133 - phosphocarrier_protein_NPr C9E61_03295 QCM25975 629130 629984 - RNase_adaptor_protein_RapZ C9E61_03300 QCM25976 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E61_03305 QCM25977 630639 630926 - ribosome_hibernation_promoting_factor C9E61_03310 QCM25978 630949 632382 - RNA_polymerase_sigma-54_factor C9E61_03315 QCM25979 632430 633155 - ABC_transporter_ATP-binding_protein C9E61_03320 QCM25980 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E61_03325 QCM25981 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCM25982 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM25983 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E61_03340 QCM25984 635847 636824 - calcium/sodium_antiporter C9E61_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM25966 93 709 107.449856734 0.0 PJR32595.1 QCM25965 100 318 100.0 6e-109 PJR32596.1 QCM25964 100 570 100.0 0.0 PJR32597.1 QCM25963 100 461 100.0 2e-162 PJR32598.1 QCM25962 100 993 100.0 0.0 PJR32600.1 QCM25960 100 537 100.0 0.0 >> 116. CP028623_0 Source: Escherichia coli strain 138 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3588 Table of genes, locations, strands and annotations of subject cluster: QCM20453 592112 593557 + metalloprotease_TldD C9E62_03105 QCM20454 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E62_03110 QCM20455 594803 595006 + protein_AaeX C9E62_03115 QCM20456 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E62_03120 QCM20457 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E62_03125 QCM20458 598008 598280 + hypothetical_protein C9E62_03130 QCM20459 598336 598599 - DUF1471_domain-containing_protein C9E62_03135 QCM20460 598964 599434 - arginine_repressor C9E62_03140 QCM20461 599869 600807 + malate_dehydrogenase C9E62_03145 QCM20462 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E62_03150 QCM20463 602028 603395 - serine_endoprotease_DegQ C9E62_03155 QCM20464 603549 603947 - hypothetical_protein C9E62_03160 QCM20465 604141 605268 + cell_division_protein_ZapE C9E62_03165 QCM20466 605487 605915 + 50S_ribosomal_protein_L13 C9E62_03170 QCM20467 605931 606323 + 30S_ribosomal_protein_S9 C9E62_03175 QCM20468 606241 606462 - hypothetical_protein C9E62_03180 QCM25026 606436 606615 + hypothetical_protein C9E62_03185 QCM25025 606567 606776 - hypothetical_protein C9E62_03190 QCM20469 606718 607356 + stringent_starvation_protein_A C9E62_03195 QCM20470 607362 607859 + stringent_starvation_protein_B C9E62_03200 QCM20471 607894 609258 - C4-dicarboxylate_ABC_transporter C9E62_03205 C9E62_03210 609258 609368 + transposase no_locus_tag QCM20472 609638 610429 + transcriptional_regulator_NanR nanR QCM20473 610551 611444 + N-acetylneuraminate_lyase nanA QCM20474 611553 613043 + MFS_transporter C9E62_03225 QCM20475 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E62_03230 QCM20476 613777 614652 + N-acetylmannosamine_kinase C9E62_03235 QCM20477 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E62_03240 QCM20478 615173 616300 - DUF1016_domain-containing_protein C9E62_03245 QCM20479 616484 617902 - glutamate_synthase_small_subunit C9E62_03250 QCM20480 617915 622375 - glutamate_synthase_large_subunit C9E62_03255 C9E62_03260 622298 622524 + hypothetical_protein no_locus_tag QCM20481 622422 622658 + hypothetical_protein C9E62_03265 QCM25027 623049 623978 + TIGR01212_family_radical_SAM_protein C9E62_03270 QCM20482 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E62_03275 QCM20483 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E62_03280 QCM20484 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E62_03285 QCM20485 628015 628647 - protein_YrbL yrbL QCM20486 628861 629133 - phosphocarrier_protein_NPr C9E62_03295 QCM20487 629130 629984 - RNase_adaptor_protein_RapZ C9E62_03300 QCM20488 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E62_03305 QCM20489 630639 630926 - ribosome_hibernation_promoting_factor C9E62_03310 QCM20490 630949 632382 - RNA_polymerase_sigma-54_factor C9E62_03315 QCM20491 632430 633155 - ABC_transporter_ATP-binding_protein C9E62_03320 QCM20492 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E62_03325 QCM20493 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCM20494 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM20495 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E62_03340 QCM20496 635847 636824 - calcium/sodium_antiporter C9E62_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM20478 93 709 107.449856734 0.0 PJR32595.1 QCM20477 100 318 100.0 6e-109 PJR32596.1 QCM20476 100 570 100.0 0.0 PJR32597.1 QCM20475 100 461 100.0 2e-162 PJR32598.1 QCM20474 100 993 100.0 0.0 PJR32600.1 QCM20472 100 537 100.0 0.0 >> 117. CP028620_0 Source: Escherichia coli strain 139 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3588 Table of genes, locations, strands and annotations of subject cluster: QCM14966 592112 593557 + metalloprotease_TldD C9E63_03110 QCM14967 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E63_03115 QCM14968 594803 595006 + protein_AaeX C9E63_03120 QCM14969 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E63_03125 QCM14970 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E63_03130 QCM14971 598008 598280 + hypothetical_protein C9E63_03135 QCM14972 598336 598599 - DUF1471_domain-containing_protein C9E63_03140 QCM14973 598964 599434 - arginine_repressor C9E63_03145 QCM14974 599869 600807 + malate_dehydrogenase C9E63_03150 QCM14975 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E63_03155 QCM14976 602028 603395 - serine_endoprotease_DegQ C9E63_03160 QCM14977 603549 603947 - hypothetical_protein C9E63_03165 QCM14978 604141 605268 + cell_division_protein_ZapE C9E63_03170 QCM14979 605487 605915 + 50S_ribosomal_protein_L13 C9E63_03175 QCM14980 605931 606323 + 30S_ribosomal_protein_S9 C9E63_03180 QCM14981 606241 606462 - hypothetical_protein C9E63_03185 QCM19544 606436 606615 + hypothetical_protein C9E63_03190 QCM19543 606567 606776 - hypothetical_protein C9E63_03195 QCM14982 606718 607356 + stringent_starvation_protein_A C9E63_03200 QCM14983 607362 607859 + stringent_starvation_protein_B C9E63_03205 QCM14984 607894 609258 - C4-dicarboxylate_ABC_transporter C9E63_03210 C9E63_03215 609258 609368 + transposase no_locus_tag QCM14985 609638 610429 + transcriptional_regulator_NanR nanR QCM14986 610551 611444 + N-acetylneuraminate_lyase nanA QCM14987 611553 613043 + MFS_transporter C9E63_03230 QCM14988 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E63_03235 QCM14989 613777 614652 + N-acetylmannosamine_kinase C9E63_03240 QCM14990 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E63_03245 QCM14991 615173 616300 - DUF1016_domain-containing_protein C9E63_03250 QCM14992 616484 617902 - glutamate_synthase_small_subunit C9E63_03255 QCM14993 617915 622375 - glutamate_synthase_large_subunit C9E63_03260 C9E63_03265 622298 622524 + hypothetical_protein no_locus_tag QCM14994 622422 622658 + hypothetical_protein C9E63_03270 QCM19545 623049 623978 + TIGR01212_family_radical_SAM_protein C9E63_03275 QCM14995 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E63_03280 QCM14996 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E63_03285 QCM14997 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E63_03290 QCM14998 628015 628647 - protein_YrbL yrbL QCM14999 628861 629133 - phosphocarrier_protein_NPr C9E63_03300 QCM15000 629130 629984 - RNase_adaptor_protein_RapZ C9E63_03305 QCM15001 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E63_03310 QCM15002 630639 630926 - ribosome_hibernation_promoting_factor C9E63_03315 QCM15003 630949 632382 - RNA_polymerase_sigma-54_factor C9E63_03320 QCM15004 632430 633155 - ABC_transporter_ATP-binding_protein C9E63_03325 QCM15005 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E63_03330 QCM15006 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCM15007 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCM15008 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E63_03345 QCM15009 635847 636824 - calcium/sodium_antiporter C9E63_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCM14991 93 709 107.449856734 0.0 PJR32595.1 QCM14990 100 318 100.0 6e-109 PJR32596.1 QCM14989 100 570 100.0 0.0 PJR32597.1 QCM14988 100 461 100.0 2e-162 PJR32598.1 QCM14987 100 993 100.0 0.0 PJR32600.1 QCM14985 100 537 100.0 0.0 >> 118. CP028617_0 Source: Escherichia coli strain 140 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3588 Table of genes, locations, strands and annotations of subject cluster: QCL63066 592112 593557 + metalloprotease_TldD C9E64_03105 QCL63067 593691 594620 - HTH-type_transcriptional_activator_AaeR C9E64_03110 QCL63068 594803 595006 + protein_AaeX C9E64_03115 QCL63069 595014 595943 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E64_03120 QCL63070 595949 597916 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E64_03125 QCL63071 598008 598280 + hypothetical_protein C9E64_03130 QCL63072 598336 598599 - DUF1471_domain-containing_protein C9E64_03135 QCL63073 598964 599434 - arginine_repressor C9E64_03140 QCL63074 599869 600807 + malate_dehydrogenase C9E64_03145 QCL63075 600871 601938 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E64_03150 QCL63076 602028 603395 - serine_endoprotease_DegQ C9E64_03155 QCL63077 603549 603947 - hypothetical_protein C9E64_03160 QCL63078 604141 605268 + cell_division_protein_ZapE C9E64_03165 QCL63079 605487 605915 + 50S_ribosomal_protein_L13 C9E64_03170 QCL63080 605931 606323 + 30S_ribosomal_protein_S9 C9E64_03175 QCL63081 606241 606462 - hypothetical_protein C9E64_03180 QCL67637 606436 606615 + hypothetical_protein C9E64_03185 QCL67636 606567 606776 - hypothetical_protein C9E64_03190 QCL63082 606718 607356 + stringent_starvation_protein_A C9E64_03195 QCL63083 607362 607859 + stringent_starvation_protein_B C9E64_03200 QCL63084 607894 609258 - C4-dicarboxylate_ABC_transporter C9E64_03205 C9E64_03210 609258 609368 + transposase no_locus_tag QCL63085 609638 610429 + transcriptional_regulator_NanR nanR QCL63086 610551 611444 + N-acetylneuraminate_lyase nanA QCL63087 611553 613043 + MFS_transporter C9E64_03225 QCL63088 613091 613780 + N-acetylmannosamine-6-phosphate_2-epimerase C9E64_03230 QCL63089 613777 614652 + N-acetylmannosamine_kinase C9E64_03235 QCL63090 614649 615113 + YhcH/YjgK/YiaL_family_protein C9E64_03240 QCL63091 615173 616300 - DUF1016_domain-containing_protein C9E64_03245 QCL63092 616484 617902 - glutamate_synthase_small_subunit C9E64_03250 QCL63093 617915 622375 - glutamate_synthase_large_subunit C9E64_03255 C9E64_03260 622298 622524 + hypothetical_protein no_locus_tag QCL63094 622422 622658 + hypothetical_protein C9E64_03265 QCL67638 623049 623978 + TIGR01212_family_radical_SAM_protein C9E64_03270 QCL63095 624074 626410 + hybrid_sensor_histidine_kinase/response regulator C9E64_03275 QCL63096 626640 627293 + isoprenoid_biosynthesis_protein_ElbB C9E64_03280 QCL63097 627290 628018 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E64_03285 QCL63098 628015 628647 - protein_YrbL yrbL QCL63099 628861 629133 - phosphocarrier_protein_NPr C9E64_03295 QCL63100 629130 629984 - RNase_adaptor_protein_RapZ C9E64_03300 QCL63101 630030 630521 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E64_03305 QCL63102 630639 630926 - ribosome_hibernation_promoting_factor C9E64_03310 QCL63103 630949 632382 - RNA_polymerase_sigma-54_factor C9E64_03315 QCL63104 632430 633155 - ABC_transporter_ATP-binding_protein C9E64_03320 QCL63105 633162 633719 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E64_03325 QCL63106 633688 634263 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCL63107 634260 634826 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCL63108 634847 635833 - arabinose_5-phosphate_isomerase_KdsD C9E64_03340 QCL63109 635847 636824 - calcium/sodium_antiporter C9E64_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCL63091 93 709 107.449856734 0.0 PJR32595.1 QCL63090 100 318 100.0 6e-109 PJR32596.1 QCL63089 100 570 100.0 0.0 PJR32597.1 QCL63088 100 461 100.0 2e-162 PJR32598.1 QCL63087 100 993 100.0 0.0 PJR32600.1 QCL63085 100 537 100.0 0.0 >> 119. CP028614_0 Source: Escherichia coli strain 141 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3588 Table of genes, locations, strands and annotations of subject cluster: QCL57578 592111 593556 + metalloprotease_TldD C9E65_03105 QCL57579 593690 594619 - HTH-type_transcriptional_activator_AaeR C9E65_03110 QCL57580 594802 595005 + protein_AaeX C9E65_03115 QCL57581 595013 595942 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E65_03120 QCL57582 595948 597915 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E65_03125 QCL57583 598007 598279 + hypothetical_protein C9E65_03130 QCL57584 598335 598598 - DUF1471_domain-containing_protein C9E65_03135 QCL57585 598963 599433 - arginine_repressor C9E65_03140 QCL57586 599868 600806 + malate_dehydrogenase C9E65_03145 QCL57587 600870 601937 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E65_03150 QCL57588 602027 603394 - serine_endoprotease_DegQ C9E65_03155 QCL57589 603548 603946 - hypothetical_protein C9E65_03160 QCL57590 604140 605267 + cell_division_protein_ZapE C9E65_03165 QCL57591 605486 605914 + 50S_ribosomal_protein_L13 C9E65_03170 QCL57592 605930 606322 + 30S_ribosomal_protein_S9 C9E65_03175 QCL57593 606240 606461 - hypothetical_protein C9E65_03180 QCL62147 606435 606614 + hypothetical_protein C9E65_03185 QCL62146 606566 606775 - hypothetical_protein C9E65_03190 QCL57594 606717 607355 + stringent_starvation_protein_A C9E65_03195 QCL57595 607361 607858 + stringent_starvation_protein_B C9E65_03200 QCL57596 607893 609257 - C4-dicarboxylate_ABC_transporter C9E65_03205 C9E65_03210 609257 609367 + transposase no_locus_tag QCL57597 609637 610428 + transcriptional_regulator_NanR nanR QCL57598 610550 611443 + N-acetylneuraminate_lyase nanA QCL57599 611552 613042 + MFS_transporter C9E65_03225 QCL57600 613090 613779 + N-acetylmannosamine-6-phosphate_2-epimerase C9E65_03230 QCL57601 613776 614651 + N-acetylmannosamine_kinase C9E65_03235 QCL57602 614648 615112 + YhcH/YjgK/YiaL_family_protein C9E65_03240 QCL57603 615172 616299 - DUF1016_domain-containing_protein C9E65_03245 QCL57604 616483 617901 - glutamate_synthase_small_subunit C9E65_03250 QCL57605 617914 622374 - glutamate_synthase_large_subunit C9E65_03255 C9E65_03260 622297 622523 + hypothetical_protein no_locus_tag QCL57606 622421 622657 + hypothetical_protein C9E65_03265 QCL62148 623048 623977 + TIGR01212_family_radical_SAM_protein C9E65_03270 QCL57607 624073 626409 + hybrid_sensor_histidine_kinase/response regulator C9E65_03275 QCL57608 626639 627292 + isoprenoid_biosynthesis_protein_ElbB C9E65_03280 QCL57609 627289 628017 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E65_03285 QCL57610 628014 628646 - protein_YrbL yrbL QCL57611 628860 629132 - phosphocarrier_protein_NPr C9E65_03295 QCL57612 629129 629983 - RNase_adaptor_protein_RapZ C9E65_03300 QCL57613 630029 630520 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E65_03305 QCL57614 630638 630925 - ribosome_hibernation_promoting_factor C9E65_03310 QCL57615 630948 632381 - RNA_polymerase_sigma-54_factor C9E65_03315 QCL57616 632429 633154 - ABC_transporter_ATP-binding_protein C9E65_03320 QCL57617 633161 633718 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E65_03325 QCL57618 633687 634262 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCL57619 634259 634825 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCL57620 634846 635832 - arabinose_5-phosphate_isomerase_KdsD C9E65_03340 QCL57621 635846 636823 - calcium/sodium_antiporter C9E65_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCL57603 93 709 107.449856734 0.0 PJR32595.1 QCL57602 100 318 100.0 6e-109 PJR32596.1 QCL57601 100 570 100.0 0.0 PJR32597.1 QCL57600 100 461 100.0 2e-162 PJR32598.1 QCL57599 100 993 100.0 0.0 PJR32600.1 QCL57597 100 537 100.0 0.0 >> 120. CP028603_0 Source: Escherichia coli strain 144 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3588 Table of genes, locations, strands and annotations of subject cluster: QCL40698 592059 593504 + metalloprotease_TldD C9E68_03110 QCL40699 593638 594567 - HTH-type_transcriptional_activator_AaeR C9E68_03115 QCL40700 594750 594953 + protein_AaeX C9E68_03120 QCL40701 594961 595890 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E68_03125 QCL40702 595896 597863 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E68_03130 QCL40703 597955 598227 + hypothetical_protein C9E68_03135 QCL40704 598283 598546 - DUF1471_domain-containing_protein C9E68_03140 QCL40705 598911 599381 - arginine_repressor C9E68_03145 QCL40706 599816 600754 + malate_dehydrogenase C9E68_03150 QCL40707 600818 601885 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E68_03155 QCL40708 601975 603342 - serine_endoprotease_DegQ C9E68_03160 QCL40709 603496 603894 - hypothetical_protein C9E68_03165 QCL40710 604088 605215 + cell_division_protein_ZapE C9E68_03170 QCL40711 605434 605862 + 50S_ribosomal_protein_L13 C9E68_03175 QCL40712 605878 606270 + 30S_ribosomal_protein_S9 C9E68_03180 QCL40713 606188 606409 - hypothetical_protein C9E68_03185 QCL45315 606383 606562 + hypothetical_protein C9E68_03190 QCL45314 606514 606723 - hypothetical_protein C9E68_03195 QCL40714 606665 607303 + stringent_starvation_protein_A C9E68_03200 QCL40715 607309 607806 + stringent_starvation_protein_B C9E68_03205 QCL40716 607841 609205 - C4-dicarboxylate_ABC_transporter C9E68_03210 C9E68_03215 609205 609315 + transposase no_locus_tag QCL40717 609585 610376 + transcriptional_regulator_NanR nanR QCL40718 610498 611391 + N-acetylneuraminate_lyase nanA QCL40719 611500 612990 + MFS_transporter C9E68_03230 QCL40720 613038 613727 + N-acetylmannosamine-6-phosphate_2-epimerase C9E68_03235 QCL40721 613724 614599 + N-acetylmannosamine_kinase C9E68_03240 QCL40722 614596 615060 + YhcH/YjgK/YiaL_family_protein C9E68_03245 QCL40723 615120 616247 - DUF1016_domain-containing_protein C9E68_03250 QCL40724 616431 617849 - glutamate_synthase_small_subunit C9E68_03255 QCL40725 617862 622322 - glutamate_synthase_large_subunit C9E68_03260 C9E68_03265 622245 622471 + hypothetical_protein no_locus_tag QCL40726 622369 622605 + hypothetical_protein C9E68_03270 QCL45316 622996 623925 + TIGR01212_family_radical_SAM_protein C9E68_03275 QCL40727 624021 626357 + hybrid_sensor_histidine_kinase/response regulator C9E68_03280 QCL40728 626587 627240 + isoprenoid_biosynthesis_protein_ElbB C9E68_03285 QCL40729 627237 627965 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E68_03290 QCL40730 627962 628594 - protein_YrbL yrbL QCL40731 628808 629080 - phosphocarrier_protein_NPr C9E68_03300 QCL40732 629077 629931 - RNase_adaptor_protein_RapZ C9E68_03305 QCL40733 629977 630468 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E68_03310 QCL40734 630586 630873 - ribosome_hibernation_promoting_factor C9E68_03315 QCL40735 630896 632329 - RNA_polymerase_sigma-54_factor C9E68_03320 QCL40736 632377 633102 - ABC_transporter_ATP-binding_protein C9E68_03325 QCL40737 633109 633666 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E68_03330 QCL40738 633635 634210 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCL40739 634207 634773 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCL40740 634794 635780 - arabinose_5-phosphate_isomerase_KdsD C9E68_03345 QCL40741 635794 636771 - calcium/sodium_antiporter C9E68_03350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCL40723 93 709 107.449856734 0.0 PJR32595.1 QCL40722 100 318 100.0 6e-109 PJR32596.1 QCL40721 100 570 100.0 0.0 PJR32597.1 QCL40720 100 461 100.0 2e-162 PJR32598.1 QCL40719 100 993 100.0 0.0 PJR32600.1 QCL40717 100 537 100.0 0.0 >> 121. CP028592_0 Source: Escherichia coli strain 150 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3588 Table of genes, locations, strands and annotations of subject cluster: QCL18665 592059 593504 + metalloprotease_TldD C9E72_03105 QCL18666 593638 594567 - HTH-type_transcriptional_activator_AaeR C9E72_03110 QCL18667 594750 594953 + protein_AaeX C9E72_03115 QCL18668 594961 595890 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C9E72_03120 QCL18669 595896 597863 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C9E72_03125 QCL18670 597955 598227 + hypothetical_protein C9E72_03130 QCL18671 598283 598546 - DUF1471_domain-containing_protein C9E72_03135 QCL18672 598911 599381 - arginine_repressor C9E72_03140 QCL18673 599816 600754 + malate_dehydrogenase C9E72_03145 QCL18674 600818 601885 - outer_membrane-stress_sensor_serine endopeptidase DegS C9E72_03150 QCL18675 601975 603342 - serine_endoprotease_DegQ C9E72_03155 QCL18676 603496 603894 - hypothetical_protein C9E72_03160 QCL18677 604088 605215 + cell_division_protein_ZapE C9E72_03165 QCL18678 605434 605862 + 50S_ribosomal_protein_L13 C9E72_03170 QCL18679 605878 606270 + 30S_ribosomal_protein_S9 C9E72_03175 QCL18680 606188 606409 - hypothetical_protein C9E72_03180 QCL23362 606383 606562 + hypothetical_protein C9E72_03185 QCL23361 606514 606723 - hypothetical_protein C9E72_03190 QCL18681 606665 607303 + stringent_starvation_protein_A C9E72_03195 QCL18682 607309 607806 + stringent_starvation_protein_B C9E72_03200 QCL18683 607841 609205 - C4-dicarboxylate_ABC_transporter C9E72_03205 C9E72_03210 609205 609315 + transposase no_locus_tag QCL18684 609585 610376 + transcriptional_regulator_NanR nanR QCL18685 610498 611391 + N-acetylneuraminate_lyase nanA QCL18686 611500 612990 + MFS_transporter C9E72_03225 QCL18687 613038 613727 + N-acetylmannosamine-6-phosphate_2-epimerase C9E72_03230 QCL18688 613724 614599 + N-acetylmannosamine_kinase C9E72_03235 QCL18689 614596 615060 + YhcH/YjgK/YiaL_family_protein C9E72_03240 QCL18690 615120 616247 - DUF1016_domain-containing_protein C9E72_03245 QCL18691 616431 617849 - glutamate_synthase_small_subunit C9E72_03250 QCL18692 617862 622322 - glutamate_synthase_large_subunit C9E72_03255 C9E72_03260 622245 622471 + hypothetical_protein no_locus_tag QCL18693 622369 622605 + hypothetical_protein C9E72_03265 QCL23363 622996 623925 + TIGR01212_family_radical_SAM_protein C9E72_03270 QCL18694 624021 626357 + hybrid_sensor_histidine_kinase/response regulator C9E72_03275 QCL18695 626587 627240 + isoprenoid_biosynthesis_protein_ElbB C9E72_03280 QCL18696 627237 627965 + monofunctional_biosynthetic_peptidoglycan transglycosylase C9E72_03285 QCL18697 627962 628594 - protein_YrbL yrbL QCL18698 628808 629080 - phosphocarrier_protein_NPr C9E72_03295 QCL18699 629077 629931 - RNase_adaptor_protein_RapZ C9E72_03300 QCL18700 629977 630468 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C9E72_03305 QCL18701 630586 630873 - ribosome_hibernation_promoting_factor C9E72_03310 QCL18702 630896 632329 - RNA_polymerase_sigma-54_factor C9E72_03315 QCL18703 632377 633102 - ABC_transporter_ATP-binding_protein C9E72_03320 QCL18704 633109 633666 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C9E72_03325 QCL18705 633635 634210 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCL18706 634207 634773 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QCL18707 634794 635780 - arabinose_5-phosphate_isomerase_KdsD C9E72_03340 QCL18708 635794 636771 - calcium/sodium_antiporter C9E72_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCL18690 93 709 107.449856734 0.0 PJR32595.1 QCL18689 100 318 100.0 6e-109 PJR32596.1 QCL18688 100 570 100.0 0.0 PJR32597.1 QCL18687 100 461 100.0 2e-162 PJR32598.1 QCL18686 100 993 100.0 0.0 PJR32600.1 QCL18684 100 537 100.0 0.0 >> 122. CP016625_0 Source: Escherichia coli O157:H7 strain FRIK944, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3588 Table of genes, locations, strands and annotations of subject cluster: ANW42121 4350084 4351070 + D-arabinose_5-phosphate_isomerase A9L45_22760 ANW42122 4351091 4351657 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase A9L45_22765 ANW42123 4351654 4352229 + LPS_export_ABC_transporter_periplasmic_protein LptC A9L45_22770 ANW42124 4352198 4352755 + lipopolysaccharide_transport_periplasmic_protein LptA A9L45_22775 ANW42125 4352762 4353487 + LPS_export_ABC_transporter_ATP-binding_protein A9L45_22780 ANW42126 4353535 4354968 + RNA_polymerase_factor_sigma-54 A9L45_22785 ANW42127 4354991 4355278 + ribosomal_subunit_interface_protein A9L45_22790 ANW42128 4355396 4355887 + PTS_IIA-like_nitrogen-regulatory_protein_PtsN A9L45_22795 ANW42129 4355933 4356787 + RNase_adaptor_protein_RapZ A9L45_22800 ANW42130 4356784 4357056 + phosphohistidinoprotein-hexose phosphotransferase A9L45_22805 ANW42131 4357270 4357902 + hypothetical_protein A9L45_22810 ANW42132 4357899 4358627 - monofunctional_biosynthetic_peptidoglycan transglycosylase A9L45_22815 ANW42133 4358624 4359277 - isoprenoid_biosynthesis_protein_ElbB A9L45_22820 ANW42134 4359507 4361843 - aerobic_respiration_two-component_sensor histidine kinase ArcB A9L45_22825 ANW43629 4361939 4362868 - TIGR01212_family_radical_SAM_protein A9L45_22830 ANW43630 4363542 4368002 + glutamate_synthase_large_subunit A9L45_22835 ANW42135 4368015 4369433 + glutamate_synthase A9L45_22840 ANW42136 4369617 4370744 + hypothetical_protein A9L45_22845 ANW42137 4370804 4371268 - hypothetical_protein A9L45_22850 ANW42138 4371265 4372140 - N-acetylmannosamine_kinase A9L45_22855 ANW42139 4372137 4372826 - N-acetylmannosamine-6-phosphate_2-epimerase A9L45_22860 ANW42140 4372874 4374364 - sialic_acid_transporter A9L45_22865 ANW42141 4374473 4375366 - N-acetylneuraminate_lyase A9L45_22870 ANW42142 4375488 4376279 - transcriptional_regulator_NanR A9L45_22875 ANW42143 4376659 4378023 + C4-dicarboxylate_ABC_transporter A9L45_22880 ANW42144 4378058 4378555 - ClpXP_protease_specificity-enhancing_factor A9L45_22885 ANW42145 4378561 4379199 - stringent_starvation_protein_A sspA ANW42146 4379594 4379986 - 30S_ribosomal_protein_S9 A9L45_22895 ANW42147 4380002 4380430 - 50S_ribosomal_protein_L13 A9L45_22900 ANW42148 4380649 4381776 - hypothetical_protein A9L45_22905 ANW42149 4381970 4382368 + hypothetical_protein A9L45_22910 ANW42150 4382522 4383889 + serine_endoprotease_DegQ A9L45_22915 ANW42151 4383979 4385046 + outer_membrane-stress_sensor_serine endopeptidase DegS A9L45_22920 ANW42152 4385110 4386048 - malate_dehydrogenase A9L45_22925 ANW42153 4386483 4386953 + arginine_repressor A9L45_22930 ANW42154 4387318 4387581 + hypothetical_protein A9L45_22935 ANW42155 4387637 4387909 - hypothetical_protein A9L45_22940 ANW42156 4388001 4389968 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB A9L45_22945 ANW42157 4389974 4390903 - efflux_transporter_periplasmic_adaptor_subunit A9L45_22950 ANW43631 4390911 4391114 - transporter A9L45_22955 ANW42158 4391297 4392226 + transcriptional_regulator A9L45_22960 ANW42159 4392360 4393805 - metalloprotease_TldD A9L45_22965 ANW42160 4393961 4397761 - TIGR02099_family_protein A9L45_22970 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ANW42136 93 709 107.449856734 0.0 PJR32595.1 ANW42137 100 318 100.0 6e-109 PJR32596.1 ANW42138 100 570 100.0 0.0 PJR32597.1 ANW42139 100 461 100.0 2e-162 PJR32598.1 ANW42140 100 993 100.0 0.0 PJR32600.1 ANW42142 100 537 100.0 0.0 >> 123. CP015846_0 Source: Escherichia coli O157:H7 strain FRIK2069, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3588 Table of genes, locations, strands and annotations of subject cluster: ANG81768 4206943 4207929 + arabinose_5-phosphate_isomerase_KdsD A8V30_21865 ANG81769 4207950 4208516 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC A8V30_21870 ANG81770 4208513 4209088 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC ANG81771 4209057 4209614 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA A8V30_21880 ANG81772 4209621 4210346 + ABC_transporter_ATP-binding_protein lptB ANG81773 4210394 4211827 + RNA_polymerase_sigma-54_factor A8V30_21890 ANG81774 4211850 4212137 + ribosome_hibernation_promoting_factor raiA ANG81775 4212255 4212746 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN A8V30_21900 ANG81776 4212792 4213646 + RNase_adaptor_protein_RapZ A8V30_21905 ANG81777 4213643 4213915 + phosphocarrier_protein_NPr A8V30_21910 ANG81778 4214129 4214761 + hypothetical_protein A8V30_21915 ANG81779 4214758 4215486 - monofunctional_biosynthetic_peptidoglycan transglycosylase A8V30_21920 ANG81780 4215483 4216136 - isoprenoid_biosynthesis_protein_ElbB A8V30_21925 ANG81781 4216366 4218702 - hybrid_sensor_histidine_kinase/response regulator A8V30_21930 ANG83288 4218798 4219727 - TIGR01212_family_radical_SAM_protein A8V30_21935 AST49124 4220118 4220354 - hypothetical_protein A8V30_31605 A8V30_31610 4220252 4220478 - hypothetical_protein no_locus_tag ANG83289 4220401 4224861 + glutamate_synthase A8V30_21940 ANG81782 4224874 4226292 + glutamate_synthase_small_subunit A8V30_21945 ANG81783 4226476 4227603 + DUF1016_domain-containing_protein A8V30_21950 ANG81784 4227663 4228127 - YhcH/YjgK/YiaL_family_protein A8V30_21955 ANG81785 4228124 4228999 - N-acetylmannosamine_kinase A8V30_21960 ANG81786 4228996 4229685 - N-acetylmannosamine-6-phosphate_2-epimerase A8V30_21965 ANG81787 4229733 4231223 - MFS_transporter A8V30_21970 ANG81788 4231332 4232225 - N-acetylneuraminate_lyase nanA ANG81789 4232347 4233138 - transcriptional_regulator_NanR A8V30_21980 A8V30_31615 4233408 4233518 - transposase no_locus_tag A8V30_21985 4233518 4234264 + C4-dicarboxylate_ABC_transporter no_locus_tag ANG81790 4234357 4235094 - protein_mom A8V30_21990 ANG81791 4235048 4235248 - Com_family_DNA-binding_transcriptional regulator A8V30_21995 AST49235 4235516 4235827 + hypothetical_protein A8V30_31620 ANG81792 4235866 4236111 - DUF826_domain-containing_protein A8V30_22000 ANG81793 4236147 4236329 - DUF1378_domain-containing_protein A8V30_22005 ANG83290 4236476 4238515 - sialate_O-acetylesterase A8V30_22010 ANG81794 4238615 4239175 - DNA-invertase A8V30_22015 A8V30_31625 4239189 4239375 - hypothetical_protein no_locus_tag ANG81795 4239398 4239601 + phage_tail_protein A8V30_22020 ANG83291 4239681 4240202 + phage_tail_protein A8V30_22025 ANG81796 4240237 4241148 - phage_tail_protein A8V30_22030 ANG81797 4241148 4241708 - DUF2313_domain-containing_protein A8V30_22035 ANG81798 4241699 4242784 - hypothetical_protein A8V30_22040 ANG81799 4242781 4243218 - hypothetical_protein A8V30_22045 ANG83292 4243211 4243825 - phage_baseplate_assembly_protein_V A8V30_22050 ANG81800 4243815 4244939 - phage_tail_protein A8V30_22055 ANG81801 4244923 4246293 - multidrug_DMT_transporter_permease A8V30_22060 ANG81802 4246259 4248334 - tail_tape_measure_protein A8V30_22065 AST49125 4248337 4248519 - hypothetical_protein A8V30_31630 ANG81803 4248461 4248937 - hypothetical_protein A8V30_22070 ANG81804 4248952 4249317 - phage_tail_protein A8V30_22075 ANG81805 4249326 4250828 - phage_tail_protein A8V30_22080 ANG81806 4250825 4251070 - DUF2635_domain-containing_protein A8V30_22085 ANG81807 4251071 4251631 - DUF1834_domain-containing_protein A8V30_22090 ANG81808 4251628 4252047 - DUF1320_domain-containing_protein A8V30_22095 ANG81809 4252044 4252430 - hypothetical_protein A8V30_22100 ANG81810 4252474 4253421 - head_protein A8V30_22105 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ANG81783 93 709 107.449856734 0.0 PJR32595.1 ANG81784 100 318 100.0 6e-109 PJR32596.1 ANG81785 100 570 100.0 0.0 PJR32597.1 ANG81786 100 461 100.0 2e-162 PJR32598.1 ANG81787 100 993 100.0 0.0 PJR32600.1 ANG81789 100 537 100.0 0.0 >> 124. CP015843_0 Source: Escherichia coli O157:H7 strain FRIK2455, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3588 Table of genes, locations, strands and annotations of subject cluster: ANG76085 4206951 4207937 + arabinose_5-phosphate_isomerase_KdsD A8V32_21570 ANG76086 4207958 4208524 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC A8V32_21575 ANG76087 4208521 4209096 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC ANG76088 4209065 4209622 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA A8V32_21585 ANG76089 4209629 4210354 + ABC_transporter_ATP-binding_protein lptB ANG76090 4210402 4211835 + RNA_polymerase_sigma-54_factor A8V32_21595 ANG76091 4211858 4212145 + ribosome_hibernation_promoting_factor raiA ANG76092 4212263 4212754 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN A8V32_21605 ANG76093 4212800 4213654 + RNase_adaptor_protein_RapZ A8V32_21610 ANG76094 4213651 4213923 + phosphocarrier_protein_NPr A8V32_21615 ANG76095 4214137 4214769 + hypothetical_protein A8V32_21620 ANG76096 4214766 4215494 - monofunctional_biosynthetic_peptidoglycan transglycosylase A8V32_21625 ANG76097 4215491 4216144 - isoprenoid_biosynthesis_protein_ElbB A8V32_21630 ANG76098 4216374 4218710 - hybrid_sensor_histidine_kinase/response regulator A8V32_21635 ANG77593 4218806 4219735 - TIGR01212_family_radical_SAM_protein A8V32_21640 ASS84588 4220126 4220362 - hypothetical_protein A8V32_31785 A8V32_31790 4220260 4220486 - hypothetical_protein no_locus_tag ANG77594 4220409 4224869 + glutamate_synthase A8V32_21645 ANG76099 4224882 4226300 + glutamate_synthase_small_subunit A8V32_21650 ANG76100 4226484 4227611 + DUF1016_domain-containing_protein A8V32_21655 ANG76101 4227671 4228135 - YhcH/YjgK/YiaL_family_protein A8V32_21660 ANG76102 4228132 4229007 - N-acetylmannosamine_kinase A8V32_21665 ANG76103 4229004 4229693 - N-acetylmannosamine-6-phosphate_2-epimerase A8V32_21670 ANG76104 4229741 4231231 - MFS_transporter A8V32_21675 ANG76105 4231340 4232233 - N-acetylneuraminate_lyase nanA ANG76106 4232355 4233146 - transcriptional_regulator_NanR A8V32_21685 A8V32_31795 4233416 4233526 - transposase no_locus_tag A8V32_21690 4233526 4234272 + C4-dicarboxylate_ABC_transporter no_locus_tag ANG76107 4234365 4235102 - protein_mom A8V32_21695 ANG76108 4235056 4235256 - Com_family_DNA-binding_transcriptional regulator A8V32_21700 ASS84704 4235524 4235835 + hypothetical_protein A8V32_31800 ANG76109 4235874 4236119 - DUF826_domain-containing_protein A8V32_21705 ANG76110 4236155 4236337 - DUF1378_domain-containing_protein A8V32_21710 ANG77595 4236484 4238523 - sialate_O-acetylesterase A8V32_21715 ANG76111 4238623 4239183 - DNA-invertase A8V32_21720 A8V32_31805 4239197 4239383 - hypothetical_protein no_locus_tag ANG77597 4239406 4239609 + phage_tail_protein A8V32_21725 ANG77596 4239689 4240210 + phage_tail_protein A8V32_21730 ANG76112 4240245 4241156 - phage_tail_protein A8V32_21735 ANG76113 4241156 4241716 - DUF2313_domain-containing_protein A8V32_21740 ANG76114 4241707 4242792 - hypothetical_protein A8V32_21745 ANG76115 4242789 4243226 - hypothetical_protein A8V32_21750 ANG77598 4243219 4243833 - phage_baseplate_assembly_protein_V A8V32_21755 ANG76116 4243823 4244947 - phage_tail_protein A8V32_21760 ANG76117 4244931 4246301 - multidrug_DMT_transporter_permease A8V32_21765 ANG76118 4246267 4248342 - tail_tape_measure_protein A8V32_21770 ASS84589 4248345 4248527 - hypothetical_protein A8V32_31810 ANG76119 4248469 4248945 - hypothetical_protein A8V32_21775 ANG76120 4248960 4249325 - phage_tail_protein A8V32_21780 ANG76121 4249334 4250836 - phage_tail_protein A8V32_21785 ANG76122 4250833 4251078 - DUF2635_domain-containing_protein A8V32_21790 ANG76123 4251079 4251639 - DUF1834_domain-containing_protein A8V32_21795 ANG76124 4251636 4252055 - DUF1320_domain-containing_protein A8V32_21800 ANG76125 4252052 4252438 - hypothetical_protein A8V32_21805 ANG76126 4252482 4253429 - head_protein A8V32_21810 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ANG76100 93 709 107.449856734 0.0 PJR32595.1 ANG76101 100 318 100.0 6e-109 PJR32596.1 ANG76102 100 570 100.0 0.0 PJR32597.1 ANG76103 100 461 100.0 2e-162 PJR32598.1 ANG76104 100 993 100.0 0.0 PJR32600.1 ANG76106 100 537 100.0 0.0 >> 125. CP015842_0 Source: Escherichia coli O157:H7 strain FRIK2533, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3588 Table of genes, locations, strands and annotations of subject cluster: ANG70589 4206939 4207925 + arabinose_5-phosphate_isomerase_KdsD A8V31_21855 ANG70590 4207946 4208512 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC A8V31_21860 ANG70591 4208509 4209084 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC ANG70592 4209053 4209610 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA A8V31_21870 ANG70593 4209617 4210342 + ABC_transporter_ATP-binding_protein lptB ANG70594 4210390 4211823 + RNA_polymerase_sigma-54_factor A8V31_21880 ANG70595 4211846 4212133 + ribosome_hibernation_promoting_factor raiA ANG70596 4212251 4212742 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN A8V31_21890 ANG70597 4212788 4213642 + RNase_adaptor_protein_RapZ A8V31_21895 ANG70598 4213639 4213911 + phosphocarrier_protein_NPr A8V31_21900 ANG70599 4214125 4214757 + hypothetical_protein A8V31_21905 ANG70600 4214754 4215482 - monofunctional_biosynthetic_peptidoglycan transglycosylase A8V31_21910 ANG70601 4215479 4216132 - isoprenoid_biosynthesis_protein_ElbB A8V31_21915 ANG70602 4216362 4218698 - hybrid_sensor_histidine_kinase/response regulator A8V31_21920 ANG72098 4218794 4219723 - TIGR01212_family_radical_SAM_protein A8V31_21925 AST49926 4220114 4220350 - hypothetical_protein A8V31_31100 A8V31_31105 4220248 4220474 - hypothetical_protein no_locus_tag ANG72099 4220397 4224857 + glutamate_synthase A8V31_21930 ANG70603 4224870 4226288 + glutamate_synthase_small_subunit A8V31_21935 ANG70604 4226472 4227599 + DUF1016_domain-containing_protein A8V31_21940 ANG70605 4227659 4228123 - YhcH/YjgK/YiaL_family_protein A8V31_21945 ANG70606 4228120 4228995 - N-acetylmannosamine_kinase A8V31_21950 ANG70607 4228992 4229681 - N-acetylmannosamine-6-phosphate_2-epimerase A8V31_21955 ANG70608 4229729 4231219 - MFS_transporter A8V31_21960 ANG70609 4231328 4232221 - N-acetylneuraminate_lyase nanA ANG70610 4232343 4233134 - transcriptional_regulator_NanR A8V31_21970 A8V31_31110 4233404 4233514 - transposase no_locus_tag A8V31_21975 4233514 4234260 + C4-dicarboxylate_ABC_transporter no_locus_tag ANG70611 4234353 4235090 - protein_mom A8V31_21980 ANG70612 4235044 4235244 - Com_family_DNA-binding_transcriptional regulator A8V31_21985 AST50041 4235512 4235823 + hypothetical_protein A8V31_31115 ANG70613 4235862 4236107 - DUF826_domain-containing_protein A8V31_21990 ANG70614 4236143 4236325 - DUF1378_domain-containing_protein A8V31_21995 ANG72100 4236472 4238511 - sialate_O-acetylesterase A8V31_22000 ANG70615 4238611 4239171 - DNA-invertase A8V31_22005 A8V31_31120 4239185 4239371 - hypothetical_protein no_locus_tag ANG70616 4239394 4239597 + phage_tail_protein A8V31_22010 ANG72101 4239677 4240198 + phage_tail_protein A8V31_22015 ANG70617 4240233 4241144 - phage_tail_protein A8V31_22020 ANG70618 4241144 4241704 - DUF2313_domain-containing_protein A8V31_22025 ANG70619 4241695 4242780 - hypothetical_protein A8V31_22030 ANG70620 4242777 4243214 - hypothetical_protein A8V31_22035 ANG72102 4243207 4243821 - phage_baseplate_assembly_protein_V A8V31_22040 ANG70621 4243811 4244935 - phage_tail_protein A8V31_22045 ANG70622 4244919 4246289 - multidrug_DMT_transporter_permease A8V31_22050 ANG70623 4246255 4248330 - tail_tape_measure_protein A8V31_22055 AST49927 4248333 4248515 - hypothetical_protein A8V31_31125 ANG70624 4248457 4248933 - hypothetical_protein A8V31_22060 ANG70625 4248948 4249313 - phage_tail_protein A8V31_22065 ANG70626 4249322 4250824 - phage_tail_protein A8V31_22070 ANG70627 4250821 4251066 - DUF2635_domain-containing_protein A8V31_22075 ANG70628 4251067 4251627 - DUF1834_domain-containing_protein A8V31_22080 ANG70629 4251624 4252043 - DUF1320_domain-containing_protein A8V31_22085 ANG70630 4252040 4252426 - hypothetical_protein A8V31_22090 ANG70631 4252470 4253417 - head_protein A8V31_22095 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ANG70604 93 709 107.449856734 0.0 PJR32595.1 ANG70605 100 318 100.0 6e-109 PJR32596.1 ANG70606 100 570 100.0 0.0 PJR32597.1 ANG70607 100 461 100.0 2e-162 PJR32598.1 ANG70608 100 993 100.0 0.0 PJR32600.1 ANG70610 100 537 100.0 0.0 >> 126. CP010240_0 Source: Escherichia coli strain C7, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3586 Table of genes, locations, strands and annotations of subject cluster: APL85027 2175482 2176927 + protease_TldD tldD APL85028 2177055 2177984 - transcriptional_regulator RG29_10690 APL88065 2178167 2178370 + transporter RG29_10695 APL85029 2178378 2179310 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG29_10700 APL85030 2179316 2181283 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG29_10705 APL85031 2181375 2181647 + hypothetical_protein RG29_10710 APL85032 2181702 2181965 - membrane_protein RG29_10715 APL85033 2182330 2182800 - arginine_repressor RG29_10720 APL85034 2183235 2184173 + malate_dehydrogenase RG29_10725 APL85035 2184235 2185302 - serine_endoprotease RG29_10730 APL85036 2185392 2186759 - serine_endoprotease_DegQ RG29_10735 APL85037 2186913 2187311 - hypothetical_protein RG29_10740 APL85038 2187505 2188632 + hypothetical_protein RG29_10745 APL85039 2188851 2189279 + 50S_ribosomal_protein_L13 RG29_10750 APL85040 2189295 2189687 + 30S_ribosomal_protein_S9 RG29_10755 APL85041 2190082 2190720 + stringent_starvation_protein_A sspA APL85042 2190726 2191223 + Clp_protease_ClpP RG29_10765 APL85043 2191266 2192588 - C4-dicarboxylate_transporter RG29_10770 APL85044 2192968 2193759 + transcriptional_regulator_NanR RG29_10775 APL85045 2193881 2194774 + N-acetylneuraminate_lyase RG29_10780 APL85046 2194883 2196373 + sialic_acid_transporter RG29_10785 APL85047 2196421 2197110 + N-acetylmannosamine-6-phosphate_2-epimerase RG29_10790 APL85048 2197107 2197982 + N-acetylmannosamine_kinase RG29_10795 APL85049 2197979 2198443 + hypothetical_protein RG29_10800 APL85050 2198503 2199630 - hypothetical_protein RG29_10805 APL85051 2199814 2201232 - glutamate_synthase RG29_10810 APL88066 2201245 2205705 - glutamate_synthase gltB APL88067 2206380 2207309 + hypothetical_protein RG29_10820 APL85052 2207405 2209741 + aerobic_respiration_control_sensor_protein_ArcB RG29_10825 APL85053 2209971 2210624 + isoprenoid_biosynthesis_protein RG29_10830 APL85054 2210621 2211349 + peptidoglycan_transglycosylase mtgA APL85055 2211346 2211978 - hypothetical_protein RG29_10840 APL85056 2212192 2212464 - phosphohistidinoprotein-hexose phosphotransferase RG29_10845 APL85057 2212461 2213315 - glmZ(sRNA)-inactivating_NTPase RG29_10850 APL85058 2213361 2213852 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG29_10855 APL85059 2213970 2214257 - ribosome_hibernation_promoting_factor_HPF RG29_10860 APL85060 2214280 2215713 - RNA_polymerase_factor_sigma-54 RG29_10865 APL85061 2215761 2216486 - sugar_ABC_transporter_ATP-binding_protein RG29_10870 APL85062 2216493 2217050 - lipopolysaccharide_transporter RG29_10875 APL85063 2217019 2217594 - lipopolysaccharide_transporter RG29_10880 APL85064 2217591 2218157 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG29_10885 APL85065 2218178 2219164 - D-arabinose_5-phosphate_isomerase RG29_10890 APL85066 2219178 2220155 - calcium/sodium:proton_antiporter RG29_10895 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APL85050 92 701 107.449856734 0.0 PJR32595.1 APL85049 97 292 100.0 1e-98 PJR32597.1 APL85047 99 456 100.0 1e-160 PJR32598.1 APL85046 99 990 100.0 0.0 PJR32599.1 APL85045 100 611 100.0 0.0 PJR32600.1 APL85044 99 536 100.0 0.0 >> 127. CP003109_0 Source: Escherichia coli O55:H7 str. RM12579, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3586 Table of genes, locations, strands and annotations of subject cluster: AEZ42302 3880787 3881773 + D-arabinose_5-phosphate_isomerase ECO55CA74_18715 AEZ42303 3881794 3882360 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase ECO55CA74_18720 AEZ42304 3882357 3882932 + lipopolysaccharide_exporter_periplasmic_protein ECO55CA74_18725 AEZ42305 3882901 3883458 + lipopolysaccharide_transport_periplasmic_protein LptA ECO55CA74_18730 AEZ42306 3883465 3884190 + lipopolysaccharide_ABC_transporter_ATP-binding protein ECO55CA74_18735 AEZ42307 3884238 3885671 + RNA_polymerase_factor_sigma-54 ECO55CA74_18740 AEZ42308 3885694 3885981 + ribosome_hibernation_promoting_factor_HPF ECO55CA74_18745 AEZ42309 3886099 3886590 + PTS_system_sugar_transporter_subunit_IIA ECO55CA74_18750 AEZ42310 3886636 3887490 + glmZ(sRNA)-inactivating_NTPase ECO55CA74_18755 AEZ42311 3887487 3887759 + phosphohistidinoprotein-hexose ECO55CA74_18760 AEZ42312 3887973 3888605 + hypothetical_protein ECO55CA74_18765 AEZ42313 3888602 3889330 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AEZ42314 3889327 3889980 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain ECO55CA74_18775 AEZ42315 3890210 3892546 - aerobic_respiration_control_sensor_protein_ArcB ECO55CA74_18780 AEZ42316 3892642 3893571 - putative_Fe-S_oxidoreductase ECO55CA74_18785 AEZ42317 3894245 3898705 + glutamate_synthase_subunit_alpha gltB AEZ42318 3898718 3900136 + glutamate_synthase_subunit_beta gltD AEZ42319 3900320 3901447 + hypothetical_protein ECO55CA74_18800 AEZ42320 3901507 3901971 - hypothetical_protein ECO55CA74_18805 AEZ42321 3901968 3902843 - N-acetylmannosamine_kinase ECO55CA74_18810 AEZ42322 3902840 3903529 - N-acetylmannosamine-6-phosphate_2-epimerase ECO55CA74_18815 AEZ42323 3903577 3905067 - putative_sialic_acid_transporter ECO55CA74_18820 AEZ42324 3905176 3906069 - N-acetylneuraminate_lyase ECO55CA74_18825 AEZ42325 3906191 3906982 - transcriptional_regulator_NanR ECO55CA74_18830 AEZ42326 3907362 3908729 + putative_cryptic_C4-dicarboxylate_transporter DcuD ECO55CA74_18835 AEZ42327 3908772 3909269 - ClpXP_protease_specificity-enhancing_factor ECO55CA74_18840 AEZ42328 3909275 3909913 - stringent_starvation_protein_A sspA AEZ42329 3910308 3910700 - 30S_ribosomal_protein_S9 rpsI AEZ42330 3910716 3911144 - 50S_ribosomal_protein_L13 rplM AEZ42331 3911363 3912490 - hypothetical_protein ECO55CA74_18860 AEZ42332 3912684 3913082 + hypothetical_protein ECO55CA74_18865 AEZ42333 3913236 3914603 + serine_endoprotease ECO55CA74_18870 AEZ42334 3914693 3915760 + serine_endoprotease ECO55CA74_18875 AEZ42335 3915824 3916762 - malate_dehydrogenase ECO55CA74_18880 AEZ42336 3917197 3917667 + arginine_repressor ECO55CA74_18885 AEZ42337 3918032 3918295 + hypothetical_protein ECO55CA74_18890 AEZ42338 3918351 3918623 - putative_barnase_inhibitor ECO55CA74_18895 AEZ42339 3918715 3920682 - p-hydroxybenzoic_acid_efflux_subunit_AaeB ECO55CA74_18900 AEZ42340 3920688 3921620 - p-hydroxybenzoic_acid_efflux_subunit_AaeA ECO55CA74_18905 AEZ42341 3921628 3921831 - efflux_system_membrane_protein ECO55CA74_18910 AEZ42342 3922014 3922943 + transcriptional_regulator ECO55CA74_18915 AEZ42343 3923071 3924516 - protease_TldD tldD AEZ42344 3924672 3928463 - hypothetical_protein ECO55CA74_18925 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AEZ42319 93 709 107.449856734 0.0 PJR32595.1 AEZ42320 100 318 100.0 6e-109 PJR32596.1 AEZ42321 99 568 100.0 0.0 PJR32597.1 AEZ42322 100 461 100.0 2e-162 PJR32598.1 AEZ42323 100 993 100.0 0.0 PJR32600.1 AEZ42325 100 537 100.0 0.0 >> 128. CP010228_0 Source: Escherichia coli strain S3, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3581 Table of genes, locations, strands and annotations of subject cluster: APL45601 31584 33029 + protease_TldD tldD APL45602 33157 34086 - transcriptional_regulator RG65_00175 APL49791 34269 34472 + transporter RG65_00180 APL45603 34480 35412 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG65_00185 APL45604 35418 37385 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG65_00190 APL45605 37477 37749 + hypothetical_protein RG65_00195 APL45606 37805 38068 - membrane_protein RG65_00200 APL45607 38433 38903 - arginine_repressor RG65_00205 APL45608 39338 40276 + malate_dehydrogenase RG65_00210 APL45609 40339 41406 - serine_endoprotease RG65_00215 APL45610 41496 42863 - serine_endoprotease_DegQ RG65_00220 APL45611 43017 43415 - hypothetical_protein RG65_00225 APL45612 43609 44736 + hypothetical_protein RG65_00230 APL45613 44955 45383 + 50S_ribosomal_protein_L13 RG65_00235 APL45614 45399 45791 + 30S_ribosomal_protein_S9 RG65_00240 APL45615 46186 46824 + stringent_starvation_protein_A sspA APL45616 46830 47327 + Clp_protease_ClpP RG65_00250 APL45617 47370 48737 - C4-dicarboxylate_transporter RG65_00255 APL45618 49117 49908 + transcriptional_regulator_NanR RG65_00260 APL45619 50030 50923 + N-acetylneuraminate_lyase RG65_00265 APL45620 51032 52522 + sialic_acid_transporter RG65_00270 APL45621 52570 53259 + N-acetylmannosamine-6-phosphate_2-epimerase RG65_00275 APL45622 53256 54131 + N-acetylmannosamine_kinase RG65_00280 APL45623 54128 54592 + hypothetical_protein RG65_00285 APL45624 54652 55779 - hypothetical_protein RG65_00290 APL45625 55963 57381 - glutamate_synthase RG65_00295 APL49792 57394 61854 - glutamate_synthase gltB APL49793 62529 63458 + hypothetical_protein RG65_00305 APL45626 63554 65890 + aerobic_respiration_control_sensor_protein_ArcB RG65_00310 APL45627 66120 66773 + isoprenoid_biosynthesis_protein RG65_00315 APL45628 66770 67498 + peptidoglycan_transglycosylase mtgA APL45629 67495 68127 - hypothetical_protein RG65_00325 APL45630 68340 68612 - phosphohistidinoprotein-hexose phosphotransferase RG65_00330 APL45631 68609 69463 - glmZ(sRNA)-inactivating_NTPase RG65_00335 APL45632 69509 70000 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG65_00340 APL45633 70118 70405 - ribosome_hibernation_promoting_factor_HPF RG65_00345 APL45634 70428 71861 - RNA_polymerase_factor_sigma-54 RG65_00350 APL45635 71909 72634 - sugar_ABC_transporter_ATP-binding_protein RG65_00355 APL45636 72641 73198 - lipopolysaccharide_transporter RG65_00360 APL45637 73167 73742 - lipopolysaccharide_transporter RG65_00365 APL45638 73739 74305 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG65_00370 APL45639 74326 75312 - D-arabinose_5-phosphate_isomerase RG65_00375 APL45640 75326 76303 - calcium/sodium:proton_antiporter RG65_00380 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APL45624 91 697 107.449856734 0.0 PJR32595.1 APL45623 97 292 100.0 1e-98 PJR32597.1 APL45621 99 456 100.0 1e-160 PJR32598.1 APL45620 99 990 100.0 0.0 PJR32599.1 APL45619 100 611 100.0 0.0 PJR32600.1 APL45618 99 536 100.0 0.0 >> 129. CP035706_0 Source: Escherichia coli O157:H7 strain COPRO21317 chromosome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3570 Table of genes, locations, strands and annotations of subject cluster: QDG06680 4015598 4016584 + arabinose-5-phosphate_isomerase_KdsD kdsD QDG06681 4016605 4017171 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QDG06682 4017168 4017743 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QDG06683 4017712 4018269 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QDG06684 4018276 4019001 + lipopolysaccharide_ABC_transporter_ATP-binding protein EWM66_21025 QDG06685 4019049 4020482 + RNA_polymerase_factor_sigma-54 EWM66_21030 QDG06686 4020505 4020792 + ribosome_hibernation_promoting_factor EWM66_21035 QDG06687 4020910 4021401 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QDG06688 4021447 4022301 + RNase_adapter_RapZ rapZ QDG06689 4022298 4022570 + PTS_phosphocarrier_protein_NPr EWM66_21050 QDG06690 4022784 4023416 + PhoP_regulatory_network_protein_YrbL yrbL QDG06691 4023413 4024141 - monofunctional_biosynthetic_peptidoglycan transglycosylase EWM66_21060 QDG06692 4024138 4024791 - isoprenoid_biosynthesis_glyoxalase_ElbB EWM66_21065 QDG06693 4025021 4027357 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QDG06694 4027453 4028382 - TIGR01212_family_radical_SAM_protein EWM66_21075 QDG06695 4033530 4034948 + glutamate_synthase_small_subunit EWM66_21085 QDG06696 4035132 4036181 + DUF1016_domain-containing_protein EWM66_21090 QDG06697 4036241 4036705 - YhcH/YjgK/YiaL_family_protein EWM66_21095 QDG06698 4036702 4037577 - N-acetylmannosamine_kinase EWM66_21100 QDG06699 4037574 4038263 - N-acetylmannosamine-6-phosphate_2-epimerase EWM66_21105 QDG06700 4038311 4039801 - sialic_acid_transporter_NanT EWM66_21110 QDG06701 4039910 4040803 - N-acetylneuraminate_lyase nanA QDG06702 4040925 4041716 - transcriptional_regulator_NanR EWM66_21120 QDG06703 4042096 4043460 + C4-dicarboxylate_transporter_DcuC dcuC QDG06704 4043495 4043992 - ClpXP_protease_specificity-enhancing_factor sspB QDG06705 4043998 4044636 - stringent_starvation_protein_A EWM66_21135 QDG06706 4044892 4045113 + hypothetical_protein EWM66_21140 QDG06707 4045031 4045423 - 30S_ribosomal_protein_S9 EWM66_21145 QDG06708 4045439 4045867 - 50S_ribosomal_protein_L13 EWM66_21150 QDG06709 4046086 4047213 - cell_division_protein_ZapE zapE QDG06710 4047407 4047805 + DUF1043_family_protein EWM66_21160 QDG06711 4047959 4049326 + serine_endoprotease_DegQ degQ QDG06712 4049416 4050483 + serine_endoprotease_DegS degS QDG06713 4050547 4051485 - malate_dehydrogenase EWM66_21175 QDG06714 4051920 4052390 + transcriptional_regulator_ArgR argR QDG06715 4052755 4053018 + peroxide/acid_stress_response_protein_YhcN yhcN QDG06716 4053074 4053346 - hypothetical_protein EWM66_21190 QDG06717 4053438 4055405 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QDG06718 4055411 4056340 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QDG06719 4056348 4056551 - DUF1656_domain-containing_protein EWM66_21205 QDG06720 4056734 4057663 + HTH-type_transcriptional_activator_AaeR aaeR QDG06721 4057797 4059242 - metalloprotease_TldD tldD QDG06722 4059398 4063198 - AsmA2_domain-containing_protein EWM66_21220 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QDG06696 96 691 100.0 0.0 PJR32595.1 QDG06697 100 318 100.0 6e-109 PJR32596.1 QDG06698 100 570 100.0 0.0 PJR32597.1 QDG06699 100 461 100.0 2e-162 PJR32598.1 QDG06700 100 993 100.0 0.0 PJR32600.1 QDG06702 100 537 100.0 0.0 >> 130. CP033605_0 Source: Escherichia coli O157:H7 strain TR01 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3511 Table of genes, locations, strands and annotations of subject cluster: AYV43318 4183546 4184532 + arabinose_5-phosphate_isomerase_KdsD EEL45_21940 AYV43319 4184553 4185119 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC AYV43320 4185116 4185691 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AYV43321 4185660 4186217 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA AYV43322 4186224 4186949 + ABC_transporter_ATP-binding_protein EEL45_21960 AYV43323 4186997 4188430 + RNA_polymerase_sigma-54_factor EEL45_21965 AYV43324 4188453 4188740 + ribosome_hibernation_promoting_factor EEL45_21970 AYV43325 4188858 4189349 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN AYV43326 4189395 4190249 + RNase_adaptor_protein_RapZ EEL45_21980 AYV43327 4190246 4190518 + phosphocarrier_protein_NPr EEL45_21985 AYV43328 4190731 4191363 + PhoP_regulatory_network_protein_YrbL yrbL AYV43329 4191360 4192088 - monofunctional_biosynthetic_peptidoglycan transglycosylase EEL45_21995 AYV43330 4192085 4192738 - isoprenoid_biosynthesis_protein_ElbB elbB AYV43331 4192968 4195304 - hybrid_sensor_histidine_kinase/response regulator EEL45_22005 AYV44728 4195400 4196329 - TIGR01212_family_radical_SAM_protein EEL45_22010 AYV43332 4197003 4201463 + glutamate_synthase_large_subunit EEL45_22015 AYV43333 4201476 4202894 + glutamate_synthase_small_subunit EEL45_22020 AYV43334 4203078 4204205 + DUF1016_domain-containing_protein EEL45_22025 AYV43335 4204265 4204729 - YhcH/YjgK/YiaL_family_protein EEL45_22030 AYV43336 4204726 4205601 - ROK_family_protein EEL45_22035 AYV43337 4205598 4206287 - N-acetylmannosamine-6-phosphate_2-epimerase EEL45_22040 AYV43338 4206335 4207825 - MFS_transporter EEL45_22045 AYV43339 4207934 4208827 - N-acetylneuraminate_lyase nanA AYV43340 4208949 4209740 - transcriptional_regulator_NanR EEL45_22055 AYV43341 4210120 4211487 + C4-dicarboxylate_transporter_DcuC dcuC AYV43342 4211529 4212026 - ClpXP_protease_specificity-enhancing_factor EEL45_22065 AYV43343 4212032 4212670 - stringent_starvation_protein_A EEL45_22070 AYV43344 4212926 4213147 + hypothetical_protein EEL45_22075 AYV43345 4213065 4213457 - 30S_ribosomal_protein_S9 EEL45_22080 AYV43346 4213473 4213901 - 50S_ribosomal_protein_L13 EEL45_22085 AYV43347 4214120 4215247 - cell_division_protein_ZapE zapE AYV43348 4215441 4215839 + DUF1043_family_protein EEL45_22095 AYV43349 4215993 4217360 + periplasmic_pH-dependent_serine_endoprotease DegQ EEL45_22100 AYV43350 4217450 4218517 + outer_membrane-stress_sensor_serine endopeptidase DegS EEL45_22105 AYV43351 4218580 4219518 - malate_dehydrogenase EEL45_22110 AYV43352 4219953 4220423 + transcriptional_regulator_ArgR argR AYV43353 4220788 4221051 + DUF1471_domain-containing_protein EEL45_22120 AYV43354 4221107 4221379 - hypothetical_protein EEL45_22125 AYV43355 4221471 4223438 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AYV43356 4223444 4224376 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AYV43357 4224384 4224587 - protein_AaeX EEL45_22140 AYV43358 4224770 4225699 + HTH-type_transcriptional_activator_AaeR aaeR AYV43359 4225827 4227272 - metalloprotease_TldD tldD AYV43360 4227428 4231228 - AsmA2_domain-containing_protein EEL45_22155 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AYV43334 91 698 107.449856734 0.0 PJR32595.1 AYV43335 98 313 100.0 8e-107 PJR32596.1 AYV43336 97 514 100.0 0.0 PJR32597.1 AYV43337 99 459 100.0 8e-162 PJR32598.1 AYV43338 99 990 100.0 0.0 PJR32600.1 AYV43340 100 537 100.0 0.0 >> 131. CP043542_0 Source: Escherichia coli strain F2_81 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3486 Table of genes, locations, strands and annotations of subject cluster: QHD10641 499973 501418 + metalloprotease_TldD tldD QHD10642 501546 502475 - HTH-type_transcriptional_activator_AaeR aaeR QHD10643 502658 502861 + DUF1656_domain-containing_protein CPH39_02390 QHD10644 502869 503801 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHD10645 503807 505774 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHD10646 505866 506138 + hypothetical_protein CPH39_02405 QHD10647 506194 506457 - peroxide/acid_stress_response_protein_YhcN yhcN QHD10648 506822 507292 - transcriptional_regulator_ArgR argR QHD10649 507727 508665 + malate_dehydrogenase mdh QHD10650 508728 509795 - serine_endoprotease_DegS CPH39_02425 QHD10651 509885 511252 - serine_endoprotease_DegQ degQ QHD10652 511406 511804 - DUF1043_family_protein CPH39_02435 QHD10653 511998 513125 + cell_division_protein_ZapE CPH39_02440 QHD10654 513344 513772 + 50S_ribosomal_protein_L13 rplM QHD10655 513788 514180 + 30S_ribosomal_protein_S9 rpsI QHD10656 514098 514319 - hypothetical_protein CPH39_02455 QHD10657 514575 515213 + stringent_starvation_protein_A sspA QHD10658 515219 515716 + ClpXP_protease_specificity-enhancing_factor sspB QHD10659 515760 517127 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHD10660 517507 518298 + transcriptional_regulator_NanR nanR QHD10661 518420 519313 + N-acetylneuraminate_lyase nanA QHD10662 519422 520912 + sialic_acid_transporter_NanT nanT QHD10663 520960 521649 + N-acetylmannosamine-6-phosphate_2-epimerase CPH39_02490 QHD10664 521646 522521 + N-acetylmannosamine_kinase CPH39_02495 QHD10665 522518 522982 + DUF386_domain-containing_protein CPH39_02500 CPH39_02505 523042 524169 - DUF1016_domain-containing_protein no_locus_tag QHD10666 524353 525771 - NAD(P)-binding_protein CPH39_02510 QHD14683 525784 530244 - glutamate_synthase_large_subunit gltB QHD10667 530919 531848 + TIGR01212_family_radical_SAM_protein CPH39_02520 QHD10668 531944 534280 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHD10669 534510 535163 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHD10670 535160 535888 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHD10671 535885 536517 - PhoP_regulatory_network_protein_YrbL yrbL QHD10672 536730 537002 - PTS_phosphocarrier_protein_NPr npr QHD10673 536999 537853 - RNase_adapter_RapZ rapZ QHD10674 537899 538390 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHD10675 538508 538795 - ribosome_hibernation_promoting_factor CPH39_02560 QHD10676 538818 540251 - RNA_polymerase_factor_sigma-54 rpoN QHD10677 540299 541024 - LPS_export_ABC_transporter_ATP-binding_protein lptB QHD10678 541031 541588 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHD10679 541557 542132 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHD10680 542129 542695 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHD10681 542716 543702 - arabinose-5-phosphate_isomerase_KdsD kdsD QHD10682 543716 544693 - calcium/sodium_antiporter CPH39_02595 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 CPH39_02505 91 697 107.449856734 0.0 PJR32595.1 QHD10665 97 292 100.0 2e-98 PJR32596.1 QHD10664 97 512 100.0 0.0 PJR32597.1 QHD10663 99 459 100.0 8e-162 PJR32598.1 QHD10662 99 990 100.0 0.0 PJR32600.1 QHD10660 99 536 100.0 0.0 >> 132. CP023386_0 Source: Escherichia coli strain 1190 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3169 Table of genes, locations, strands and annotations of subject cluster: ATC10838 567085 568530 + metalloprotease_TldD CNQ48_02825 ATC10839 568658 569587 - HTH-type_transcriptional_activator_AaeR CNQ48_02830 ATC10840 569770 569973 + protein_AaeX CNQ48_02835 ATC10841 569981 570913 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CNQ48_02840 ATC10842 570919 572886 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CNQ48_02845 ATC10843 572978 573250 + hypothetical_protein CNQ48_02850 ATC10844 573305 573568 - hypothetical_protein CNQ48_02855 ATC10845 573933 574403 - arginine_repressor CNQ48_02860 ATC10846 574838 575776 + malate_dehydrogenase CNQ48_02865 ATC10847 575839 576906 - outer_membrane-stress_sensor_serine endopeptidase DegS CNQ48_02870 ATC10848 576996 578363 - serine_endoprotease_DegQ CNQ48_02875 ATC10849 578517 578915 - hypothetical_protein CNQ48_02880 ATC10850 579109 580236 + cell_division_protein_ZapE CNQ48_02885 ATC10851 580455 580883 + 50S_ribosomal_protein_L13 CNQ48_02890 ATC10852 580899 581291 + 30S_ribosomal_protein_S9 CNQ48_02895 ATC10853 581209 581430 - hypothetical_protein CNQ48_02900 ATC14868 581535 581744 - hypothetical_protein CNQ48_02905 ATC10854 581686 582324 + stringent_starvation_protein_A CNQ48_02910 ATC10855 582330 582827 + stringent_starvation_protein_B CNQ48_02915 ATC10856 582871 584238 - C4-dicarboxylate_transporter CNQ48_02920 CNQ48_02925 584238 584348 + transposase no_locus_tag ATC10857 584618 585409 + transcriptional_regulator_NanR CNQ48_02930 ATC10858 585531 586424 + N-acetylneuraminate_lyase nanA ATC10859 586533 588023 + MFS_transporter CNQ48_02940 ATC10860 588071 588760 + N-acetylmannosamine-6-phosphate_2-epimerase CNQ48_02945 ATC10861 588757 589632 + N-acetylmannosamine_kinase CNQ48_02950 ATC10862 589629 590093 + YhcH/YjgK/YiaL_family_protein CNQ48_02955 ATC10863 590153 591280 - DUF1016_domain-containing_protein CNQ48_02960 ATC10864 591464 592882 - glutamate_synthase CNQ48_02965 ATC10865 592895 597355 - glutamate_synthase_large_subunit CNQ48_02970 CNQ48_02975 597278 597504 + hypothetical_protein no_locus_tag ATC10866 597402 597638 + hypothetical_protein CNQ48_02980 ATC14869 598030 598959 + TIGR01212_family_radical_SAM_protein CNQ48_02985 ATC10867 599055 601391 + hybrid_sensor_histidine_kinase/response regulator CNQ48_02990 ATC10868 601621 602274 + isoprenoid_biosynthesis_protein_ElbB CNQ48_02995 ATC10869 602271 602999 + monofunctional_biosynthetic_peptidoglycan transglycosylase CNQ48_03000 ATC10870 602996 603628 - hypothetical_protein CNQ48_03005 ATC10871 603841 604113 - phosphocarrier_protein_NPr CNQ48_03010 ATC10872 604110 604964 - RNase_adaptor_protein_RapZ CNQ48_03015 ATC10873 605010 605501 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN CNQ48_03020 ATC10874 605619 605906 - ribosome_hibernation_promoting_factor CNQ48_03025 ATC10875 605929 607362 - RNA_polymerase_sigma-54_factor CNQ48_03030 ATC10876 607410 608135 - ABC_transporter_ATP-binding_protein lptB ATC10877 608142 608699 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA CNQ48_03040 ATC10878 608668 609243 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC ATC10879 609240 609806 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC CNQ48_03050 ATC10880 609827 610813 - arabinose_5-phosphate_isomerase_KdsD CNQ48_03055 ATC10881 610827 611804 - calcium/sodium_antiporter CNQ48_03060 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ATC10863 90 692 107.449856734 0.0 PJR32595.1 ATC10862 98 313 100.0 9e-107 PJR32596.1 ATC10861 98 560 100.0 0.0 PJR32597.1 ATC10860 99 456 100.0 1e-160 PJR32599.1 ATC10858 100 611 100.0 0.0 PJR32600.1 ATC10857 100 537 100.0 0.0 >> 133. CP030939_0 Source: Escherichia coli strain AMSHJX01 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 8 MultiGeneBlast score: 8.0 Cumulative Blast bit score: 3123 Table of genes, locations, strands and annotations of subject cluster: AXE55754 483537 484982 + metalloprotease_TldD DTO54_02530 AXE55755 485110 486039 - HTH-type_transcriptional_activator_AaeR DTO54_02535 AXE55756 486222 486425 + protein_AaeX DTO54_02540 AXE55757 486433 487365 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DTO54_02545 AXE55758 487371 489338 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DTO54_02550 AXE55759 489430 489702 + hypothetical_protein DTO54_02555 AXE55760 489758 490021 - DUF1471_domain-containing_protein DTO54_02560 AXE55761 490386 490856 - transcriptional_regulator_ArgR DTO54_02565 AXE55762 491291 492229 + malate_dehydrogenase DTO54_02570 AXE55763 492291 493358 - outer_membrane-stress_sensor_serine endopeptidase DegS DTO54_02575 AXE55764 493448 494815 - periplasmic_pH-dependent_serine_endoprotease DegQ DTO54_02580 AXE55765 494969 495367 - DUF1043_family_protein DTO54_02585 AXE55766 495561 496688 + cell_division_protein_ZapE DTO54_02590 AXE55767 496907 497335 + 50S_ribosomal_protein_L13 DTO54_02595 AXE55768 497351 497743 + 30S_ribosomal_protein_S9 DTO54_02600 AXE55769 497661 497882 - hypothetical_protein DTO54_02605 AXE60043 497856 498035 + hypothetical_protein DTO54_02610 AXE60042 497987 498196 - hypothetical_protein DTO54_02615 AXE55770 498138 498776 + stringent_starvation_protein_A DTO54_02620 AXE55771 498782 499279 + stringent_starvation_protein_B DTO54_02625 AXE55772 499322 500689 - C4-dicarboxylate_transporter_DcuC DTO54_02630 DTO54_02635 500689 500799 + transposase no_locus_tag AXE55773 501069 501860 + transcriptional_regulator_NanR DTO54_02640 AXE55774 501982 502875 + N-acetylneuraminate_lyase nanA AXE55775 502985 504475 + MFS_transporter DTO54_02650 AXE55776 504523 505212 + N-acetylmannosamine-6-phosphate_2-epimerase DTO54_02655 AXE55777 505209 506084 + ROK_family_protein DTO54_02660 AXE55778 506081 506545 + YhcH/YjgK/YiaL_family_protein DTO54_02665 AXE55779 506605 507732 - DUF1016_domain-containing_protein DTO54_02670 AXE55780 507916 509334 - glutamate_synthase_small_subunit DTO54_02675 AXE55781 509347 513807 - glutamate_synthase_large_subunit DTO54_02680 DTO54_02685 513730 513956 + hypothetical_protein no_locus_tag AXE55782 513854 514090 + hypothetical_protein DTO54_02690 AXE60044 514482 515411 + TIGR01212_family_radical_SAM_protein DTO54_02695 AXE55783 515507 517843 + hybrid_sensor_histidine_kinase/response regulator DTO54_02700 AXE55784 518073 518726 + glutamine_amidotransferase DTO54_02705 AXE55785 518723 519451 + monofunctional_biosynthetic_peptidoglycan transglycosylase DTO54_02710 AXE55786 519448 520080 - PhoP_regulatory_network_protein_YrbL DTO54_02715 AXE55787 520294 520566 - phosphocarrier_protein_NPr DTO54_02720 AXE55788 520563 521417 - RNase_adaptor_protein_RapZ DTO54_02725 AXE55789 521463 521954 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN DTO54_02730 AXE55790 522072 522359 - ribosome_hibernation_promoting_factor DTO54_02735 AXE55791 522382 523815 - RNA_polymerase_sigma-54_factor DTO54_02740 AXE55792 523863 524588 - ABC_transporter_ATP-binding_protein DTO54_02745 AXE55793 524595 525152 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA DTO54_02750 AXE55794 525121 525696 - LPS_export_ABC_transporter_periplasmic_protein LptC DTO54_02755 AXE55795 525693 526259 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC DTO54_02760 AXE55796 526280 527266 - arabinose_5-phosphate_isomerase_KdsD DTO54_02765 AXE55797 527280 528257 - calcium/sodium_antiporter DTO54_02770 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AXE55779 92 701 107.449856734 0.0 PJR32595.1 AXE55778 98 311 100.0 7e-106 PJR32596.1 AXE55777 97 508 100.0 5e-179 PJR32597.1 AXE55776 99 456 100.0 1e-160 PJR32599.1 AXE55774 100 611 100.0 0.0 PJR32600.1 AXE55773 99 536 100.0 0.0 >> 134. CP028126_0 Source: Escherichia coli O26 str. RM10386 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3102 Table of genes, locations, strands and annotations of subject cluster: AWJ56606 4386268 4386843 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AWJ56607 4386812 4387369 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA I3U_25405 AWJ56608 4387376 4388101 + ABC_transporter_ATP-binding_protein I3U_25410 AWJ56609 4388149 4389582 + RNA_polymerase_sigma-54_factor I3U_25415 AWJ56610 4389605 4389892 + ribosome_hibernation_promoting_factor I3U_25420 AWJ56611 4390010 4390501 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN I3U_25425 AWJ56612 4390547 4391401 + RNase_adaptor_protein_RapZ I3U_25430 AWJ56613 4391398 4391670 + phosphocarrier_protein_NPr I3U_25435 AWJ56614 4391884 4392516 + protein_YrbL yrbL AWJ56615 4392513 4393241 - monofunctional_biosynthetic_peptidoglycan transglycosylase I3U_25445 AWJ56616 4393238 4393891 - glutamine_amidotransferase I3U_25450 AWJ56617 4394121 4396457 - hybrid_sensor_histidine_kinase/response regulator I3U_25455 AWJ58103 4396553 4397482 - TIGR01212_family_radical_SAM_protein I3U_25460 AWJ56618 4397874 4398110 - hypothetical_protein I3U_25465 I3U_25470 4398008 4398234 - hypothetical_protein no_locus_tag AWJ56619 4398157 4402617 + glutamate_synthase_large_subunit I3U_25475 AWJ56620 4402630 4404048 + glutamate_synthase_small_subunit I3U_25480 I3U_25485 4404232 4405279 + DUF1016_domain-containing_protein no_locus_tag AWJ56621 4405339 4405803 - YhcH/YjgK/YiaL_family_protein I3U_25490 AWJ56622 4405800 4406675 - N-acetylmannosamine_kinase I3U_25495 AWJ56623 4406672 4407361 - N-acetylmannosamine-6-phosphate_2-epimerase I3U_25500 AWJ56624 4407409 4408899 - MFS_transporter I3U_25505 AWJ56625 4409009 4409902 - N-acetylneuraminate_lyase nanA AWJ56626 4410024 4410815 - transcriptional_regulator_NanR nanR I3U_25520 4411085 4411195 - transposase no_locus_tag AWJ56627 4411195 4412562 + C4-dicarboxylate_transporter I3U_25525 AWJ56628 4412605 4413102 - stringent_starvation_protein_B I3U_25530 AWJ56629 4413108 4413746 - stringent_starvation_protein_A I3U_25535 AWJ56630 4413688 4413897 + hypothetical_protein I3U_25540 AWJ58104 4413849 4414028 - hypothetical_protein I3U_25545 AWJ56631 4414140 4414532 - 30S_ribosomal_protein_S9 I3U_25550 AWJ56632 4414548 4414976 - 50S_ribosomal_protein_L13 I3U_25555 AWJ56633 4415195 4416322 - cell_division_protein_ZapE I3U_25560 AWJ56634 4416516 4416914 + hypothetical_protein I3U_25565 AWJ56635 4417068 4418435 + periplasmic_pH-dependent_serine_endoprotease DegQ I3U_25570 AWJ56636 4418525 4419592 + outer_membrane-stress_sensor_serine endopeptidase DegS I3U_25575 AWJ56637 4419655 4420593 - malate_dehydrogenase I3U_25580 AWJ56638 4421028 4421498 + arginine_repressor I3U_25585 AWJ56639 4421863 4422126 + DUF1471_domain-containing_protein I3U_25590 AWJ56640 4422182 4422454 - hypothetical_protein I3U_25595 AWJ56641 4422546 4424513 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB I3U_25600 AWJ56642 4424519 4425451 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA I3U_25605 AWJ56643 4425459 4425662 - protein_AaeX I3U_25610 AWJ56644 4425845 4426774 + HTH-type_transcriptional_activator_AaeR I3U_25615 AWJ56645 4426902 4428347 - metalloprotease_TldD I3U_25620 AWJ56646 4428503 4432303 - AsmA2_domain-containing_protein I3U_25625 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AWJ56622 97 509 100.0 1e-179 PJR32597.1 AWJ56623 99 456 100.0 1e-160 PJR32598.1 AWJ56624 99 990 100.0 0.0 PJR32599.1 AWJ56625 100 611 100.0 0.0 PJR32600.1 AWJ56626 99 536 100.0 0.0 >> 135. CP028116_0 Source: Escherichia coli O26 str. RM8426 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3102 Table of genes, locations, strands and annotations of subject cluster: AWJ40335 4241528 4242103 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AWJ40336 4242072 4242629 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA I3M_23880 AWJ40337 4242636 4243361 + ABC_transporter_ATP-binding_protein I3M_23885 AWJ40338 4243409 4244842 + RNA_polymerase_sigma-54_factor I3M_23890 AWJ40339 4244865 4245152 + ribosome_hibernation_promoting_factor I3M_23895 AWJ40340 4245270 4245761 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN I3M_23900 AWJ40341 4245807 4246661 + RNase_adaptor_protein_RapZ I3M_23905 AWJ40342 4246658 4246930 + phosphocarrier_protein_NPr I3M_23910 AWJ40343 4247144 4247776 + protein_YrbL yrbL AWJ40344 4247773 4248501 - monofunctional_biosynthetic_peptidoglycan transglycosylase I3M_23920 AWJ40345 4248498 4249151 - glutamine_amidotransferase I3M_23925 AWJ40346 4249381 4251717 - hybrid_sensor_histidine_kinase/response regulator I3M_23930 AWJ41821 4251813 4252742 - TIGR01212_family_radical_SAM_protein I3M_23935 AWJ40347 4253134 4253370 - hypothetical_protein I3M_23940 I3M_23945 4253268 4253494 - hypothetical_protein no_locus_tag AWJ40348 4253417 4257877 + glutamate_synthase_large_subunit I3M_23950 AWJ40349 4257890 4259308 + glutamate_synthase_small_subunit I3M_23955 I3M_23960 4259492 4260539 + DUF1016_domain-containing_protein no_locus_tag AWJ40350 4260599 4261063 - YhcH/YjgK/YiaL_family_protein I3M_23965 AWJ40351 4261060 4261935 - N-acetylmannosamine_kinase I3M_23970 AWJ40352 4261932 4262621 - N-acetylmannosamine-6-phosphate_2-epimerase I3M_23975 AWJ40353 4262669 4264159 - MFS_transporter I3M_23980 AWJ40354 4264269 4265162 - N-acetylneuraminate_lyase nanA AWJ40355 4265284 4266075 - transcriptional_regulator_NanR nanR I3M_23995 4266345 4266455 - transposase no_locus_tag AWJ40356 4266455 4267822 + C4-dicarboxylate_transporter I3M_24000 AWJ40357 4267865 4268362 - stringent_starvation_protein_B I3M_24005 AWJ40358 4268368 4269006 - stringent_starvation_protein_A I3M_24010 AWJ40359 4268948 4269157 + hypothetical_protein I3M_24015 AWJ41822 4269109 4269288 - hypothetical_protein I3M_24020 AWJ40360 4269400 4269792 - 30S_ribosomal_protein_S9 I3M_24025 AWJ40361 4269808 4270236 - 50S_ribosomal_protein_L13 I3M_24030 AWJ40362 4270455 4271582 - cell_division_protein_ZapE I3M_24035 AWJ40363 4271776 4272174 + hypothetical_protein I3M_24040 AWJ40364 4272328 4273695 + periplasmic_pH-dependent_serine_endoprotease DegQ I3M_24045 AWJ40365 4273785 4274852 + outer_membrane-stress_sensor_serine endopeptidase DegS I3M_24050 AWJ40366 4274915 4275853 - malate_dehydrogenase I3M_24055 AWJ40367 4276288 4276758 + arginine_repressor I3M_24060 AWJ40368 4277123 4277386 + DUF1471_domain-containing_protein I3M_24065 I3M_24070 4277442 4277715 - hypothetical_protein no_locus_tag AWJ40369 4277807 4279774 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB I3M_24075 AWJ40370 4279780 4280712 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA I3M_24080 AWJ40371 4280720 4280923 - protein_AaeX I3M_24085 AWJ40372 4281106 4282035 + HTH-type_transcriptional_activator_AaeR I3M_24090 AWJ40373 4282163 4283608 - metalloprotease_TldD I3M_24095 AWJ40374 4283764 4287564 - AsmA2_domain-containing_protein I3M_24100 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AWJ40351 97 509 100.0 1e-179 PJR32597.1 AWJ40352 99 456 100.0 1e-160 PJR32598.1 AWJ40353 99 990 100.0 0.0 PJR32599.1 AWJ40354 100 611 100.0 0.0 PJR32600.1 AWJ40355 99 536 100.0 0.0 >> 136. CP028112_0 Source: Escherichia coli O103 str. RM8385 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3102 Table of genes, locations, strands and annotations of subject cluster: AWJ34398 4127820 4128395 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AWJ34399 4128364 4128921 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA I3Q_22515 AWJ34400 4128928 4129653 + ABC_transporter_ATP-binding_protein I3Q_22520 AWJ34401 4129701 4131134 + RNA_polymerase_sigma-54_factor I3Q_22525 AWJ34402 4131157 4131444 + ribosome_hibernation_promoting_factor I3Q_22530 AWJ34403 4131562 4132053 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN I3Q_22535 AWJ34404 4132099 4132953 + RNase_adaptor_protein_RapZ I3Q_22540 AWJ34405 4132950 4133222 + phosphocarrier_protein_NPr I3Q_22545 AWJ34406 4133436 4134068 + protein_YrbL yrbL AWJ34407 4134065 4134793 - monofunctional_biosynthetic_peptidoglycan transglycosylase I3Q_22555 AWJ34408 4134790 4135443 - glutamine_amidotransferase I3Q_22560 AWJ34409 4135673 4138009 - hybrid_sensor_histidine_kinase/response regulator I3Q_22565 AWJ35999 4138105 4139034 - TIGR01212_family_radical_SAM_protein I3Q_22570 AWJ34410 4139426 4139662 - hypothetical_protein I3Q_22575 I3Q_22580 4139560 4139786 - hypothetical_protein no_locus_tag AWJ34411 4139709 4144169 + glutamate_synthase_large_subunit I3Q_22585 AWJ34412 4144182 4145600 + glutamate_synthase_small_subunit I3Q_22590 I3Q_22595 4145784 4146831 + DUF1016_domain-containing_protein no_locus_tag AWJ34413 4146891 4147355 - YhcH/YjgK/YiaL_family_protein I3Q_22600 AWJ34414 4147352 4148227 - N-acetylmannosamine_kinase I3Q_22605 AWJ34415 4148224 4148913 - N-acetylmannosamine-6-phosphate_2-epimerase I3Q_22610 AWJ34416 4148961 4150451 - MFS_transporter I3Q_22615 AWJ34417 4150561 4151454 - N-acetylneuraminate_lyase nanA AWJ34418 4151576 4152367 - transcriptional_regulator_NanR nanR I3Q_22630 4152637 4152747 - transposase no_locus_tag AWJ34419 4152747 4154114 + C4-dicarboxylate_transporter I3Q_22635 AWJ34420 4154157 4154654 - stringent_starvation_protein_B I3Q_22640 AWJ34421 4154660 4155298 - stringent_starvation_protein_A I3Q_22645 AWJ34422 4155240 4155449 + hypothetical_protein I3Q_22650 AWJ36000 4155401 4155580 - hypothetical_protein I3Q_22655 AWJ34423 4155554 4155775 + hypothetical_protein I3Q_22660 AWJ34424 4155693 4156085 - 30S_ribosomal_protein_S9 I3Q_22665 AWJ34425 4156101 4156529 - 50S_ribosomal_protein_L13 I3Q_22670 AWJ34426 4156748 4157875 - cell_division_protein_ZapE I3Q_22675 AWJ34427 4158069 4158467 + hypothetical_protein I3Q_22680 AWJ34428 4158621 4159988 + periplasmic_pH-dependent_serine_endoprotease DegQ I3Q_22685 AWJ34429 4160078 4161145 + outer_membrane-stress_sensor_serine endopeptidase DegS I3Q_22690 AWJ34430 4161208 4162146 - malate_dehydrogenase I3Q_22695 AWJ34431 4162581 4163051 + arginine_repressor I3Q_22700 AWJ34432 4163416 4163679 + hypothetical_protein I3Q_22705 AWJ34433 4163735 4164007 - hypothetical_protein I3Q_22710 AWJ34434 4164099 4166066 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB I3Q_22715 AWJ34435 4166072 4167004 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA I3Q_22720 AWJ34436 4167012 4167215 - protein_AaeX I3Q_22725 AWJ34437 4167398 4168327 + HTH-type_transcriptional_activator_AaeR I3Q_22730 AWJ34438 4168455 4169900 - metalloprotease_TldD I3Q_22735 AWJ34439 4170056 4173856 - AsmA2_domain-containing_protein I3Q_22740 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AWJ34414 97 509 100.0 1e-179 PJR32597.1 AWJ34415 99 456 100.0 1e-160 PJR32598.1 AWJ34416 99 990 100.0 0.0 PJR32599.1 AWJ34417 100 611 100.0 0.0 PJR32600.1 AWJ34418 99 536 100.0 0.0 >> 137. CP048371_0 Source: Escherichia coli strain 163 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3100 Table of genes, locations, strands and annotations of subject cluster: QHW81958 493598 495043 + metalloprotease_TldD tldD QHW81959 495177 496106 - HTH-type_transcriptional_activator_AaeR aaeR QHW81960 496289 496492 + AaeX_family_protein GZS07_02345 QHW81961 496500 497432 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHW81962 497438 499405 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHW81963 499497 499769 + hypothetical_protein GZS07_02360 QHW81964 499825 500088 - peroxide/acid_stress_response_protein_YhcN yhcN QHW81965 500453 500923 - transcriptional_regulator_ArgR argR QHW81966 501358 502296 + malate_dehydrogenase mdh QHW81967 502359 503426 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QHW81968 503516 504883 - serine_endoprotease_DegQ degQ QHW81969 505037 505435 - DUF1043_family_protein GZS07_02390 QHW81970 505629 506756 + cell_division_protein_ZapE GZS07_02395 QHW81971 506975 507403 + 50S_ribosomal_protein_L13 rplM QHW81972 507419 507811 + 30S_ribosomal_protein_S9 rpsI QHW81973 508206 508844 + stringent_starvation_protein_A sspA QHW81974 508850 509347 + ClpXP_protease_specificity-enhancing_factor sspB QHW81975 509390 510757 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHW81976 511138 511929 + transcriptional_regulator_NanR nanR QHW81977 512051 512944 + N-acetylneuraminate_lyase nanA QHW81978 513053 514543 + sialic_acid_transporter_NanT nanT QHW81979 514591 515280 + N-acetylmannosamine-6-phosphate_2-epimerase GZS07_02440 QHW81980 515277 516152 + N-acetylmannosamine_kinase GZS07_02445 QHW81981 516149 516613 + DUF386_domain-containing_protein GZS07_02450 QHW81982 516673 517533 - DUF1016_domain-containing_protein GZS07_02455 GZS07_02460 517621 518360 + IS3_family_transposase no_locus_tag QHW85653 519033 520541 + group_II_intron_reverse_transcriptase/maturase ltrA GZS07_02470 520631 521104 + IS3_family_transposase no_locus_tag GZS07_02475 521147 521383 - DUF1016_family_protein no_locus_tag QHW81983 521568 522284 - DUF1120_domain-containing_protein GZS07_02480 QHW81984 522281 522826 - hypothetical_protein GZS07_02485 QHW81985 522823 525204 - fimbrial_biogenesis_outer_membrane_usher protein GZS07_02490 QHW81986 525225 525899 - fimbria/pilus_periplasmic_chaperone GZS07_02495 QHW81987 526071 526835 - DUF1120_domain-containing_protein GZS07_02500 QHW81988 527395 528813 - glutamate_synthase GZS07_02505 QHW85654 528826 533286 - glutamate_synthase_large_subunit gltB QHW81989 533961 534890 + TIGR01212_family_radical_SAM_protein GZS07_02515 QHW81990 534986 537322 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 QHW81980 97 507 100.0 1e-178 PJR32597.1 QHW81979 99 456 100.0 1e-160 PJR32598.1 QHW81978 99 990 100.0 0.0 PJR32599.1 QHW81977 100 611 100.0 0.0 PJR32600.1 QHW81976 99 536 100.0 0.0 >> 138. CP048367_0 Source: Escherichia coli strain 164 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3100 Table of genes, locations, strands and annotations of subject cluster: QHW86477 530264 531709 + metalloprotease_TldD tldD QHW86478 531843 532772 - HTH-type_transcriptional_activator_AaeR aaeR QHW86479 532955 533158 + AaeX_family_protein GZS08_02520 QHW86480 533166 534098 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHW86481 534104 536071 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHW86482 536163 536435 + hypothetical_protein GZS08_02535 QHW86483 536491 536754 - peroxide/acid_stress_response_protein_YhcN yhcN QHW86484 537119 537589 - transcriptional_regulator_ArgR argR QHW86485 538024 538962 + malate_dehydrogenase mdh QHW86486 539025 540092 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QHW86487 540182 541549 - serine_endoprotease_DegQ degQ QHW86488 541703 542101 - DUF1043_family_protein GZS08_02565 QHW86489 542295 543422 + cell_division_protein_ZapE GZS08_02570 QHW86490 543641 544069 + 50S_ribosomal_protein_L13 rplM QHW86491 544085 544477 + 30S_ribosomal_protein_S9 rpsI QHW86492 544872 545510 + stringent_starvation_protein_A sspA QHW86493 545516 546013 + ClpXP_protease_specificity-enhancing_factor sspB QHW86494 546056 547423 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHW86495 547803 548594 + transcriptional_regulator_NanR nanR QHW86496 548716 549609 + N-acetylneuraminate_lyase nanA QHW86497 549718 551208 + sialic_acid_transporter_NanT nanT QHW86498 551256 551945 + N-acetylmannosamine-6-phosphate_2-epimerase GZS08_02615 QHW86499 551942 552817 + N-acetylmannosamine_kinase GZS08_02620 QHW86500 552814 553278 + DUF386_domain-containing_protein GZS08_02625 QHW86501 553338 554198 - DUF1016_domain-containing_protein GZS08_02630 GZS08_02635 554286 555025 + IS3_family_transposase no_locus_tag QHW90230 555698 557206 + group_II_intron_reverse_transcriptase/maturase ltrA GZS08_02645 557296 557769 + IS3_family_transposase no_locus_tag GZS08_02650 557812 558048 - DUF1016_family_protein no_locus_tag QHW86502 558233 558949 - DUF1120_domain-containing_protein GZS08_02655 QHW86503 558946 559491 - hypothetical_protein GZS08_02660 QHW86504 559488 561869 - fimbrial_biogenesis_outer_membrane_usher protein GZS08_02665 QHW86505 561890 562564 - fimbria/pilus_periplasmic_chaperone GZS08_02670 QHW86506 562736 563500 - DUF1120_domain-containing_protein GZS08_02675 QHW86507 564060 565478 - glutamate_synthase GZS08_02680 QHW90231 565491 569951 - glutamate_synthase_large_subunit gltB QHW86508 570626 571555 + TIGR01212_family_radical_SAM_protein GZS08_02690 QHW86509 571651 573987 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 QHW86499 97 507 100.0 1e-178 PJR32597.1 QHW86498 99 456 100.0 1e-160 PJR32598.1 QHW86497 99 990 100.0 0.0 PJR32599.1 QHW86496 100 611 100.0 0.0 PJR32600.1 QHW86495 99 536 100.0 0.0 >> 139. CP048310_0 Source: Escherichia coli strain 32-4 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3100 Table of genes, locations, strands and annotations of subject cluster: QHW43827 547145 548590 + metalloprotease_TldD tldD QHW43828 548724 549653 - HTH-type_transcriptional_activator_AaeR aaeR QHW43829 549836 550039 + AaeX_family_protein GZS16_02615 QHW43830 550047 550979 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHW43831 550985 552952 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHW43832 553044 553316 + hypothetical_protein GZS16_02630 QHW43833 553372 553635 - peroxide/acid_stress_response_protein_YhcN yhcN QHW43834 554000 554470 - transcriptional_regulator_ArgR argR QHW43835 554905 555843 + malate_dehydrogenase mdh QHW43836 555906 556973 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QHW43837 557063 558430 - serine_endoprotease_DegQ degQ QHW43838 558584 558982 - DUF1043_family_protein GZS16_02660 QHW43839 559176 560303 + cell_division_protein_ZapE GZS16_02665 QHW43840 560522 560950 + 50S_ribosomal_protein_L13 rplM QHW43841 560966 561358 + 30S_ribosomal_protein_S9 rpsI QHW43842 561753 562391 + stringent_starvation_protein_A sspA QHW43843 562397 562894 + ClpXP_protease_specificity-enhancing_factor sspB QHW43844 562937 564304 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHW43845 564684 565475 + transcriptional_regulator_NanR nanR QHW43846 565597 566490 + N-acetylneuraminate_lyase nanA QHW43847 566599 568089 + sialic_acid_transporter_NanT nanT QHW43848 568137 568826 + N-acetylmannosamine-6-phosphate_2-epimerase GZS16_02710 QHW43849 568823 569698 + N-acetylmannosamine_kinase GZS16_02715 QHW43850 569695 570159 + DUF386_domain-containing_protein GZS16_02720 QHW47505 570219 571079 - DUF1016_domain-containing_protein GZS16_02725 QHW43851 571167 572380 + IS3_family_transposase GZS16_02730 GZS16_02735 572423 572659 - DUF1016_family_protein no_locus_tag QHW43852 572844 573560 - DUF1120_domain-containing_protein GZS16_02740 QHW43853 573557 574102 - hypothetical_protein GZS16_02745 QHW43854 574099 576480 - fimbrial_biogenesis_outer_membrane_usher protein GZS16_02750 QHW43855 576501 577175 - fimbria/pilus_periplasmic_chaperone GZS16_02755 QHW43856 577347 578111 - DUF1120_domain-containing_protein GZS16_02760 QHW43857 578671 580089 - glutamate_synthase GZS16_02765 QHW47506 580102 584562 - glutamate_synthase_large_subunit gltB QHW43858 585237 586166 + TIGR01212_family_radical_SAM_protein GZS16_02775 QHW43859 586262 588598 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHW43860 588828 589481 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHW43861 589478 590206 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 QHW43849 97 507 100.0 1e-178 PJR32597.1 QHW43848 99 456 100.0 1e-160 PJR32598.1 QHW43847 99 990 100.0 0.0 PJR32599.1 QHW43846 100 611 100.0 0.0 PJR32600.1 QHW43845 99 536 100.0 0.0 >> 140. CP034734_0 Source: Escherichia coli strain L53 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3100 Table of genes, locations, strands and annotations of subject cluster: AZU79241 498131 499576 + metalloprotease_TldD tldD AZU79242 499710 500639 - HTH-type_transcriptional_activator_AaeR aaeR AZU79243 500822 501025 + DUF1656_domain-containing_protein ELF07_02425 AZU79244 501033 501965 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AZU79245 501971 503938 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AZU79246 504030 504302 + hypothetical_protein ELF07_02440 AZU79247 504358 504621 - DUF1471_domain-containing_protein ELF07_02445 AZU79248 504986 505456 - transcriptional_regulator_ArgR argR AZU79249 505891 506829 + malate_dehydrogenase ELF07_02455 AZU79250 506892 507959 - serine_endoprotease_DegS degS AZU79251 508049 509416 - serine_endoprotease_DegQ degQ AZU79252 509570 509968 - DUF1043_family_protein ELF07_02470 AZU79253 510162 511289 + cell_division_protein_ZapE zapE AZU79254 511508 511936 + 50S_ribosomal_protein_L13 ELF07_02480 AZU79255 511952 512344 + 30S_ribosomal_protein_S9 ELF07_02485 AZU79256 512739 513377 + stringent_starvation_protein_A ELF07_02490 AZU79257 513383 513880 + ClpXP_protease_specificity-enhancing_factor ELF07_02495 AZU79258 513922 515289 - C4-dicarboxylate_transporter_DcuC dcuC AZU79259 515669 516460 + transcriptional_regulator_NanR ELF07_02505 AZU79260 516582 517475 + N-acetylneuraminate_lyase nanA AZU79261 517585 519075 + MFS_transporter ELF07_02515 AZU79262 519123 519812 + N-acetylmannosamine-6-phosphate_2-epimerase ELF07_02520 AZU79263 519809 520684 + N-acetylmannosamine_kinase ELF07_02525 AZU79264 520681 521145 + YhcH/YjgK/YiaL_family_protein ELF07_02530 AZU79265 521205 521954 - DUF1016_family_protein ELF07_02535 ELF07_02540 521964 522661 - IS1_family_transposase no_locus_tag AZU79266 522883 524301 - glutamate_synthase_small_subunit ELF07_02545 AZU79267 524314 528774 - glutamate_synthase_subunit_alpha ELF07_02550 AZU79268 529449 530378 + TIGR01212_family_radical_SAM_protein ELF07_02555 AZU79269 530474 532810 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB AZU79270 533040 533693 + isoprenoid_biosynthesis_protein_ElbB elbB AZU79271 533690 534418 + monofunctional_biosynthetic_peptidoglycan transglycosylase ELF07_02570 AZU79272 534415 535047 - PhoP_regulatory_network_protein_YrbL yrbL AZU79273 535261 535533 - PTS_phosphocarrier_protein_NPr ELF07_02580 AZU79274 535530 536384 - RNase_adaptor_protein_RapZ ELF07_02585 AZU79275 536430 536921 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN AZU79276 537039 537326 - ribosome_hibernation_promoting_factor ELF07_02595 AZU79277 537349 538782 - RNA_polymerase_factor_sigma-54 ELF07_02600 AZU79278 538830 539555 - lipopolysaccharide_ABC_transporter_ATP-binding protein ELF07_02605 AZU79279 539562 540119 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA AZU79280 540088 540663 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC AZU79281 540660 541226 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AZU79263 97 507 100.0 1e-178 PJR32597.1 AZU79262 99 456 100.0 1e-160 PJR32598.1 AZU79261 99 990 100.0 0.0 PJR32599.1 AZU79260 100 611 100.0 0.0 PJR32600.1 AZU79259 99 536 100.0 0.0 >> 141. CP029973_0 Source: Escherichia coli strain 51008369SK1 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3100 Table of genes, locations, strands and annotations of subject cluster: AWV13409 4270661 4271590 - TIGR01212_family_radical_SAM_protein DNQ41_21860 AWV12696 4271982 4272218 - hypothetical_protein DNQ41_21865 DNQ41_21870 4272116 4272342 - hypothetical_protein no_locus_tag AWV12697 4272265 4276725 + glutamate_synthase_large_subunit DNQ41_21875 AWV12698 4276738 4278156 + glutamate_synthase DNQ41_21880 AWV12699 4278311 4278595 + hypothetical_protein DNQ41_21885 AWV12700 4278716 4279480 + glutamate_synthase_operon_protein_GltF DNQ41_21890 AWV12701 4279652 4280326 + fimbrial_chaperone_protein DNQ41_21895 AWV12702 4280347 4282728 + fimbrial_protein DNQ41_21900 AWV12703 4282725 4283270 + hypothetical_protein DNQ41_21905 AWV12704 4283267 4283983 + DUF1120_domain-containing_protein DNQ41_21910 DNQ41_21915 4284167 4284403 + DUF1016_family_protein no_locus_tag DNQ41_21920 4284446 4284919 - IS3_family_transposase no_locus_tag AWV12705 4285009 4286532 - group_II_intron_reverse_transcriptase/maturase ltrA AWV12706 4286826 4287197 + hypothetical_protein DNQ41_21930 DNQ41_21935 4287190 4287929 - IS3_family_transposase no_locus_tag AWV12707 4288017 4288877 + DUF1016_family_protein DNQ41_21940 AWV12708 4288937 4289401 - YhcH/YjgK/YiaL_family_protein DNQ41_21945 AWV12709 4289398 4290273 - N-acetylmannosamine_kinase DNQ41_21950 AWV12710 4290270 4290959 - N-acetylmannosamine-6-phosphate_2-epimerase DNQ41_21955 AWV12711 4291007 4292497 - MFS_transporter DNQ41_21960 AWV12712 4292606 4293499 - N-acetylneuraminate_lyase nanA AWV12713 4293621 4294412 - transcriptional_regulator_NanR nanR DNQ41_21975 4294682 4294792 - transposase no_locus_tag AWV12714 4294792 4296159 + C4-dicarboxylate_transporter_DcuC DNQ41_21980 AWV12715 4296202 4296699 - stringent_starvation_protein_B DNQ41_21985 AWV12716 4296705 4297343 - stringent_starvation_protein_A DNQ41_21990 AWV12717 4297285 4297494 + hypothetical_protein DNQ41_21995 AWV12718 4297738 4298130 - 30S_ribosomal_protein_S9 DNQ41_22000 AWV12719 4298146 4298574 - 50S_ribosomal_protein_L13 DNQ41_22005 DNQ41_22010 4298793 4299919 - cell_division_protein_ZapE no_locus_tag AWV12720 4300113 4300511 + DUF1043_domain-containing_protein DNQ41_22015 AWV12721 4300665 4302032 + periplasmic_pH-dependent_serine_endoprotease DegQ DNQ41_22020 AWV12722 4302122 4303189 + outer_membrane-stress_sensor_serine endopeptidase DegS DNQ41_22025 AWV12723 4303252 4304190 - malate_dehydrogenase DNQ41_22030 AWV12724 4304625 4305095 + arginine_repressor DNQ41_22035 AWV12725 4305460 4305723 + DUF1471_domain-containing_protein DNQ41_22040 AWV12726 4305779 4306051 - hypothetical_protein DNQ41_22045 AWV12727 4306143 4308110 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DNQ41_22050 AWV12728 4308116 4309048 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DNQ41_22055 AWV12729 4309056 4309259 - protein_AaeX DNQ41_22060 AWV12730 4309442 4310371 + HTH-type_transcriptional_activator_AaeR DNQ41_22065 AWV12731 4310505 4311950 - metalloprotease_TldD DNQ41_22070 AWV12732 4312379 4316179 - AsmA2_domain-containing_protein DNQ41_22075 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AWV12709 97 507 100.0 1e-178 PJR32597.1 AWV12710 99 456 100.0 1e-160 PJR32598.1 AWV12711 99 990 100.0 0.0 PJR32599.1 AWV12712 100 611 100.0 0.0 PJR32600.1 AWV12713 99 536 100.0 0.0 >> 142. CP029741_0 Source: Escherichia coli strain AR_0085 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3100 Table of genes, locations, strands and annotations of subject cluster: AWS62964 1658580 1659155 + LPS_export_ABC_transporter_periplasmic_protein LptC AM464_08625 AWS62965 1659124 1659681 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA AM464_08630 AWS62966 1659688 1660413 + ABC_transporter_ATP-binding_protein AM464_08635 AWS62967 1660461 1661894 + RNA_polymerase_factor_sigma-54 AM464_08640 AWS62968 1661917 1662204 + ribosome_hibernation_promoting_factor AM464_08645 AWS62969 1662322 1662813 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN AM464_08650 AWS62970 1662859 1663713 + RNase_adaptor_protein_RapZ AM464_08655 AWS62971 1663710 1663982 + phosphocarrier_protein_NPr AM464_08660 AWS62972 1664196 1664828 + protein_YrbL yrbL AWS62973 1664825 1665553 - monofunctional_biosynthetic_peptidoglycan transglycosylase AM464_08670 AWS62974 1665550 1666203 - glutamine_amidotransferase AM464_08675 AWS62975 1666433 1668769 - hybrid_sensor_histidine_kinase/response regulator AM464_08680 AWS66294 1668865 1669794 - TIGR01212_family_radical_SAM_protein AM464_08685 AWS62976 1670186 1670422 - hypothetical_protein AM464_08690 AM464_08695 1670320 1670546 - hypothetical_protein no_locus_tag AWS62977 1670469 1674929 + glutamate_synthase_subunit_alpha AM464_08700 AWS62978 1674942 1676360 + glutamate_synthase_small_subunit AM464_08705 AM464_08710 1676403 1676501 + glycosyltransferase no_locus_tag AM464_08715 1676458 1677155 + IS1_family_transposase no_locus_tag AWS62979 1677165 1677914 + DUF1016_domain-containing_protein AM464_08720 AWS62980 1677974 1678438 - YhcH/YjgK/YiaL_family_protein AM464_08725 AWS62981 1678435 1679310 - N-acetylmannosamine_kinase AM464_08730 AWS62982 1679307 1679996 - N-acetylmannosamine-6-phosphate_2-epimerase AM464_08735 AWS62983 1680044 1681534 - MFS_transporter AM464_08740 AWS62984 1681644 1682537 - N-acetylneuraminate_lyase nanA AWS62985 1682659 1683450 - transcriptional_regulator_NanR nanR AM464_08755 1683720 1683830 - transposase no_locus_tag AWS62986 1683830 1685197 + C4-dicarboxylate_transporter_DcuC AM464_08760 AWS62987 1685239 1685736 - stringent_starvation_protein_B AM464_08765 AWS62988 1685742 1686380 - stringent_starvation_protein_A AM464_08770 AWS62989 1686322 1686531 + hypothetical_protein AM464_08775 AWS62990 1686775 1687167 - 30S_ribosomal_protein_S9 AM464_08780 AWS62991 1687183 1687611 - 50S_ribosomal_protein_L13 AM464_08785 AWS62992 1687830 1688957 - cell_division_protein_ZapE AM464_08790 AWS62993 1689151 1689549 + DUF1043_domain-containing_protein AM464_08795 AWS62994 1689703 1691070 + serine_endoprotease_DegQ AM464_08800 AWS62995 1691160 1692227 + outer_membrane-stress_sensor_serine endopeptidase DegS AM464_08805 AWS62996 1692290 1693228 - malate_dehydrogenase AM464_08810 AWS62997 1693663 1694133 + arginine_repressor AM464_08815 AWS62998 1694498 1694761 + DUF1471_domain-containing_protein AM464_08820 AWS62999 1694817 1695089 - hypothetical_protein AM464_08825 AWS63000 1695181 1697148 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB AM464_08830 AWS63001 1697154 1698086 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA AM464_08835 AWS63002 1698094 1698297 - protein_AaeX AM464_08840 AWS63003 1698480 1699409 + HTH-type_transcriptional_activator_AaeR AM464_08845 AWS63004 1699543 1700988 - metalloprotease_TldD AM464_08850 AWS63005 1701418 1705218 - DUF3971_domain-containing_protein AM464_08855 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AWS62981 97 507 100.0 1e-178 PJR32597.1 AWS62982 99 456 100.0 1e-160 PJR32598.1 AWS62983 99 990 100.0 0.0 PJR32599.1 AWS62984 100 611 100.0 0.0 PJR32600.1 AWS62985 99 536 100.0 0.0 >> 143. CP029574_0 Source: Escherichia coli strain DA33133 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3100 Table of genes, locations, strands and annotations of subject cluster: AWO18997 349805 350458 - glutamine_amidotransferase DLJ62_01855 AWO18998 350688 353024 - hybrid_sensor_histidine_kinase/response regulator DLJ62_01860 AWO22992 353120 354049 - TIGR01212_family_radical_SAM_protein DLJ62_01865 AWO18999 354441 354677 - hypothetical_protein DLJ62_01870 DLJ62_01875 354575 354801 - hypothetical_protein no_locus_tag AWO19000 354724 359184 + glutamate_synthase_large_subunit DLJ62_01880 AWO19001 359197 360615 + glutamate_synthase DLJ62_01885 AWO19002 360770 361054 + hypothetical_protein DLJ62_01890 AWO19003 361175 361939 + glutamate_synthase_operon_protein_GltF DLJ62_01895 AWO19004 362111 362785 + fimbrial_chaperone_protein DLJ62_01900 AWO19005 362806 365187 + fimbrial_protein DLJ62_01905 AWO19006 365184 365729 + hypothetical_protein DLJ62_01910 AWO19007 365726 366442 + DUF1120_domain-containing_protein DLJ62_01915 DLJ62_01920 366627 367268 + DUF1016_domain-containing_protein no_locus_tag AWO19008 367314 368587 + IS3-like_element_IS2_family_transposase DLJ62_01925 AWO19009 368572 369090 + DUF1016_domain-containing_protein DLJ62_01930 AWO19010 369150 369614 - YhcH/YjgK/YiaL_family_protein DLJ62_01935 AWO19011 369611 370486 - N-acetylmannosamine_kinase DLJ62_01940 AWO19012 370483 371172 - N-acetylmannosamine-6-phosphate_2-epimerase DLJ62_01945 AWO19013 371220 372710 - MFS_transporter DLJ62_01950 AWO19014 372819 373712 - N-acetylneuraminate_lyase nanA AWO19015 373834 374625 - transcriptional_regulator_NanR nanR DLJ62_01965 374895 375005 - transposase no_locus_tag AWO19016 375005 376372 + C4-dicarboxylate_transporter_DcuC DLJ62_01970 AWO19017 376415 376912 - stringent_starvation_protein_B DLJ62_01975 AWO19018 376918 377556 - stringent_starvation_protein_A DLJ62_01980 AWO19019 377498 377707 + hypothetical_protein DLJ62_01985 AWO19020 377951 378343 - 30S_ribosomal_protein_S9 DLJ62_01990 AWO19021 378359 378787 - 50S_ribosomal_protein_L13 DLJ62_01995 AWO19022 379006 380133 - cell_division_protein_ZapE DLJ62_02000 AWO19023 380327 380725 + DUF1043_domain-containing_protein DLJ62_02005 AWO19024 380879 382246 + periplasmic_pH-dependent_serine_endoprotease DegQ DLJ62_02010 AWO19025 382336 383403 + outer_membrane-stress_sensor_serine endopeptidase DegS DLJ62_02015 AWO19026 383466 384404 - malate_dehydrogenase DLJ62_02020 AWO19027 384839 385309 + arginine_repressor DLJ62_02025 AWO19028 385674 385937 + DUF1471_domain-containing_protein DLJ62_02030 AWO19029 385993 386265 - hypothetical_protein DLJ62_02035 AWO19030 386357 388324 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DLJ62_02040 AWO19031 388330 389262 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DLJ62_02045 AWO19032 389270 389473 - protein_AaeX DLJ62_02050 AWO19033 389656 390585 + HTH-type_transcriptional_activator_AaeR DLJ62_02055 AWO19034 390719 392164 - metalloprotease_TldD DLJ62_02060 AWO19035 392594 396394 - AsmA2_domain-containing_protein DLJ62_02065 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AWO19011 97 507 100.0 1e-178 PJR32597.1 AWO19012 99 456 100.0 1e-160 PJR32598.1 AWO19013 99 990 100.0 0.0 PJR32599.1 AWO19014 100 611 100.0 0.0 PJR32600.1 AWO19015 99 536 100.0 0.0 >> 144. CP026935_0 Source: Escherichia coli strain CFS3292 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3100 Table of genes, locations, strands and annotations of subject cluster: QHF76804 554367 555812 + metalloprotease_TldD C5F72_02900 QHF76805 555946 556875 - HTH-type_transcriptional_activator_AaeR C5F72_02905 QHF76806 557058 557261 + protein_AaeX C5F72_02910 QHF76807 557269 558201 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C5F72_02915 QHF76808 558207 560174 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C5F72_02920 QHF76809 560266 560538 + hypothetical_protein C5F72_02925 QHF76810 560594 560857 - DUF1471_domain-containing_protein C5F72_02930 QHF76811 561222 561692 - arginine_repressor C5F72_02935 QHF76812 562127 563065 + malate_dehydrogenase C5F72_02940 QHF76813 563128 564195 - outer_membrane-stress_sensor_serine endopeptidase DegS C5F72_02945 QHF76814 564285 565652 - periplasmic_pH-dependent_serine_endoprotease DegQ C5F72_02950 QHF76815 565806 566204 - hypothetical_protein C5F72_02955 QHF76816 566398 567525 + cell_division_protein_ZapE C5F72_02960 QHF76817 567744 568172 + 50S_ribosomal_protein_L13 C5F72_02965 QHF76818 568188 568580 + 30S_ribosomal_protein_S9 C5F72_02970 QHF81012 568824 569033 - hypothetical_protein C5F72_02975 QHF76819 568975 569613 + stringent_starvation_protein_A C5F72_02980 QHF76820 569619 570116 + stringent_starvation_protein_B C5F72_02985 QHF76821 570159 571526 - C4-dicarboxylate_transporter C5F72_02990 C5F72_02995 571526 571636 + transposase no_locus_tag QHF76822 571906 572697 + transcriptional_regulator_NanR nanR QHF76823 572820 573713 + N-acetylneuraminate_lyase nanA QHF76824 573822 575312 + MFS_transporter C5F72_03010 QHF76825 575360 576049 + N-acetylmannosamine-6-phosphate_2-epimerase C5F72_03015 QHF76826 576046 576921 + N-acetylmannosamine_kinase C5F72_03020 QHF76827 576918 577382 + YhcH/YjgK/YiaL_family_protein C5F72_03025 C5F72_03030 577442 578440 - DUF1016_domain-containing_protein no_locus_tag QHF76828 578472 580028 - IS66_family_transposase C5F72_03035 QHF76829 580048 580395 - IS66_family_insertion_sequence_hypothetical protein C5F72_03040 QHF76830 580392 581066 - IS66_family_insertion_sequence_hypothetical protein C5F72_03045 C5F72_03050 581149 581286 - DUF1016_domain-containing_protein no_locus_tag QHF76831 581471 582187 - DUF1120_domain-containing_protein C5F72_03055 QHF76832 582184 582729 - hypothetical_protein C5F72_03060 QHF76833 582665 582886 - hypothetical_protein C5F72_03065 QHF76834 582852 584125 + IS3-like_element_IS2_family_transposase C5F72_03070 C5F72_03075 584137 586443 - fimbrial_protein no_locus_tag QHF81013 586464 587054 - fimbrial_chaperone_protein C5F72_03080 QHF76835 587089 588069 + IS5-like_element_ISKpn26_family_transposase C5F72_03085 QHF76836 588107 588295 - hypothetical_protein C5F72_03090 QHF76837 588509 589273 - glutamate_synthase_operon_protein_GltF C5F72_03095 QHF76838 589394 589678 - hypothetical_protein C5F72_03100 QHF76839 589833 591251 - glutamate_synthase C5F72_03105 QHF76840 591264 595724 - glutamate_synthase_large_subunit C5F72_03110 C5F72_03115 595647 595873 + hypothetical_protein no_locus_tag QHF76841 595771 596007 + hypothetical_protein C5F72_03120 QHF81014 596399 597328 + TIGR01212_family_radical_SAM_protein C5F72_03125 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 QHF76826 97 507 100.0 1e-178 PJR32597.1 QHF76825 99 456 100.0 1e-160 PJR32598.1 QHF76824 99 990 100.0 0.0 PJR32599.1 QHF76823 100 611 100.0 0.0 PJR32600.1 QHF76822 99 536 100.0 0.0 >> 145. CP026932_0 Source: Escherichia coli strain CFS3273 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3100 Table of genes, locations, strands and annotations of subject cluster: QHF71537 608759 610204 + metalloprotease_TldD C5F73_03160 QHF71538 610338 611267 - HTH-type_transcriptional_activator_AaeR C5F73_03165 QHF71539 611450 611653 + protein_AaeX C5F73_03170 QHF71540 611661 612593 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C5F73_03175 QHF71541 612599 614566 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C5F73_03180 QHF71542 614658 614930 + hypothetical_protein C5F73_03185 QHF71543 614986 615249 - DUF1471_domain-containing_protein C5F73_03190 QHF71544 615614 616084 - arginine_repressor C5F73_03195 QHF71545 616519 617457 + malate_dehydrogenase C5F73_03200 QHF71546 617520 618587 - outer_membrane-stress_sensor_serine endopeptidase DegS C5F73_03205 QHF71547 618677 620044 - periplasmic_pH-dependent_serine_endoprotease DegQ C5F73_03210 QHF75631 620198 620596 - hypothetical_protein C5F73_03215 QHF71548 620790 621917 + cell_division_protein_ZapE C5F73_03220 QHF71549 622136 622564 + 50S_ribosomal_protein_L13 C5F73_03225 QHF71550 622580 622972 + 30S_ribosomal_protein_S9 C5F73_03230 QHF75632 623216 623425 - hypothetical_protein C5F73_03235 QHF71551 623367 624005 + stringent_starvation_protein_A C5F73_03240 QHF71552 624011 624508 + stringent_starvation_protein_B C5F73_03245 QHF71553 624551 625918 - C4-dicarboxylate_transporter C5F73_03250 C5F73_03255 625918 626028 + transposase no_locus_tag QHF71554 626298 627089 + transcriptional_regulator_NanR nanR QHF71555 627211 628104 + N-acetylneuraminate_lyase nanA QHF71556 628213 629703 + MFS_transporter C5F73_03270 QHF71557 629751 630440 + N-acetylmannosamine-6-phosphate_2-epimerase C5F73_03275 QHF71558 630437 631312 + N-acetylmannosamine_kinase C5F73_03280 QHF71559 631309 631773 + YhcH/YjgK/YiaL_family_protein C5F73_03285 QHF71560 631833 632693 - DUF1016_domain-containing_protein C5F73_03290 C5F73_03295 632781 633520 + IS3_family_transposase no_locus_tag QHF71561 633513 633884 - hypothetical_protein C5F73_03300 QHF71562 634178 635701 + group_II_intron_reverse_transcriptase/maturase ltrA C5F73_03310 635791 636264 + IS3_family_transposase no_locus_tag C5F73_03315 636307 636543 - DUF1016_domain-containing_protein no_locus_tag QHF71563 636728 637444 - DUF1120_domain-containing_protein C5F73_03320 QHF71564 637441 637986 - hypothetical_protein C5F73_03325 QHF71565 637983 640364 - fimbrial_protein C5F73_03330 QHF71566 640385 641059 - fimbrial_chaperone_protein C5F73_03335 QHF71567 641231 641995 - glutamate_synthase_operon_protein_GltF C5F73_03340 QHF71568 642116 642400 - hypothetical_protein C5F73_03345 QHF71569 642555 643973 - glutamate_synthase C5F73_03350 QHF71570 643986 648446 - glutamate_synthase_large_subunit C5F73_03355 C5F73_03360 648369 648595 + hypothetical_protein no_locus_tag C5F73_03365 648493 648729 + hypothetical_protein no_locus_tag QHF75633 649121 650050 + TIGR01212_family_radical_SAM_protein C5F73_03370 QHF71571 650146 652482 + hybrid_sensor_histidine_kinase/response regulator C5F73_03375 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 QHF71558 97 507 100.0 1e-178 PJR32597.1 QHF71557 99 456 100.0 1e-160 PJR32598.1 QHF71556 99 990 100.0 0.0 PJR32599.1 QHF71555 100 611 100.0 0.0 PJR32600.1 QHF71554 99 536 100.0 0.0 >> 146. CP025950_0 Source: Escherichia coli strain SCEC020023 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3100 Table of genes, locations, strands and annotations of subject cluster: AUS36620 493602 495047 + metalloprotease_TldD tldD AUS36621 495181 496110 - HTH-type_transcriptional_activator_AaeR aaeR AUS36622 496293 496496 + DUF1656_domain-containing_protein C1A20_03715 AUS36623 496504 497436 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AUS36624 497442 499409 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AUS36625 499501 499773 + hypothetical_protein C1A20_03730 AUS36626 499829 500092 - peroxide/acid_stress_response_protein_YhcN yhcN AUS36627 500457 500927 - transcriptional_regulator_ArgR argR AUS36628 501362 502300 + malate_dehydrogenase mdh AUS36629 502363 503430 - serine_endoprotease_DegS C1A20_03750 AUS36630 503520 504887 - serine_endoprotease_DegQ degQ AUS36631 505041 505439 - DUF1043_family_protein C1A20_03760 AUS36632 505633 506760 + cell_division_protein_ZapE C1A20_03765 AUS36633 506979 507407 + 50S_ribosomal_protein_L13 rplM AUS36634 507423 507815 + 30S_ribosomal_protein_S9 rpsI AUS36635 508210 508848 + stringent_starvation_protein_A sspA AUS36636 508854 509351 + ClpXP_protease_specificity-enhancing_factor sspB AUS36637 509394 510761 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC AUS36638 511141 511932 + transcriptional_regulator_NanR nanR AUS36639 512054 512947 + N-acetylneuraminate_lyase nanA AUS36640 513056 514546 + sialic_acid_transporter_NanT nanT AUS36641 514594 515283 + N-acetylmannosamine-6-phosphate_2-epimerase C1A20_03820 AUS36642 515280 516155 + N-acetylmannosamine_kinase C1A20_03825 AUS36643 516152 516616 + DUF386_domain-containing_protein C1A20_03830 AUS36644 516676 517536 - DUF1016_domain-containing_protein C1A20_03835 C1A20_03840 517624 518363 + IS3_family_transposase no_locus_tag AUS36645 518356 518727 - hypothetical_protein C1A20_03845 AUS36646 519036 520544 + group_II_intron_reverse_transcriptase/maturase ltrA C1A20_03855 520634 521107 + IS3_family_transposase no_locus_tag C1A20_03860 521150 521386 - DUF1016_domain-containing_protein no_locus_tag AUS36647 521571 522287 - DUF1120_domain-containing_protein C1A20_03865 AUS36648 522284 522829 - hypothetical_protein C1A20_03870 AUS36649 522826 525207 - fimbrial_biogenesis_outer_membrane_usher protein C1A20_03875 AUS36650 525228 525902 - fimbria/pilus_periplasmic_chaperone C1A20_03880 AUS36651 526074 526838 - DUF1120_domain-containing_protein C1A20_03885 AUS36653 527398 528816 - glutamate_synthase C1A20_03895 AUS36654 528829 533289 - glutamate_synthase_large_subunit gltB AUS40588 533964 534893 + TIGR01212_family_radical_SAM_protein C1A20_03915 AUS36656 534989 537325 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AUS36642 97 507 100.0 1e-178 PJR32597.1 AUS36641 99 456 100.0 1e-160 PJR32598.1 AUS36640 99 990 100.0 0.0 PJR32599.1 AUS36639 100 611 100.0 0.0 PJR32600.1 AUS36638 99 536 100.0 0.0 >> 147. CP018962_0 Source: Escherichia coli strain Ecol_422 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3100 Table of genes, locations, strands and annotations of subject cluster: AQV34605 587445 588098 - glutamine_amidotransferase BE933_06160 AQV34606 588328 590664 - hybrid_sensor_histidine_kinase/response regulator BE933_06165 AQV38534 590760 591689 - TIGR01212_family_radical_SAM_protein BE933_06170 AQV34607 592081 592317 - hypothetical_protein BE933_06175 BE933_06180 592215 592441 - hypothetical_protein no_locus_tag AQV34608 592364 596824 + glutamate_synthase_large_subunit BE933_06185 AQV34609 596837 598255 + glutamate_synthase BE933_06190 AQV34610 598233 598418 - hypothetical_protein BE933_06195 AQV34611 598410 598694 + hypothetical_protein BE933_06200 AQV34612 598815 599579 + glutamate_synthase_operon_protein_GltF BE933_06205 AQV34613 599751 600425 + fimbrial_chaperone_protein BE933_06210 AQV34614 600446 602827 + fimbrial_protein BE933_06215 AQV34615 602824 603369 + hypothetical_protein BE933_06220 AQV34616 603366 604082 + hypothetical_protein BE933_06225 AQV34617 604267 604923 + hypothetical_protein BE933_06230 AQV34618 604950 605042 - hypothetical_protein BE933_06235 AQV34619 604999 605364 + transposase BE933_06240 AQV34620 605322 606227 + transposase BE933_06245 AQV34621 606212 606730 + nuclease BE933_06250 AQV34622 606790 607254 - hypothetical_protein BE933_06255 AQV34623 607251 608126 - N-acetylmannosamine_kinase BE933_06260 AQV34624 608123 608812 - N-acetylmannosamine-6-phosphate_2-epimerase BE933_06265 AQV34625 608860 610350 - MFS_transporter BE933_06270 AQV34626 610459 611352 - N-acetylneuraminate_lyase BE933_06275 AQV34627 611474 612265 - transcriptional_regulator_NanR BE933_06280 BE933_06285 612535 612645 - transposase no_locus_tag AQV34628 612645 614012 + C4-dicarboxylate_transporter BE933_06290 AQV34629 614055 614552 - stringent_starvation_protein_B BE933_06295 AQV34630 614558 615196 - stringent_starvation_protein_A sspA AQV34631 615591 615983 - 30S_ribosomal_protein_S9 BE933_06305 AQV34632 615999 616427 - 50S_ribosomal_protein_L13 BE933_06310 AQV34633 616646 617773 - cell_division_protein_ZapE BE933_06315 AQV38535 617967 618365 + hypothetical_protein BE933_06320 AQV34634 618519 619886 + periplasmic_pH-dependent_serine_endoprotease DegQ BE933_06325 AQV34635 619976 621043 + outer_membrane-stress_sensor_serine endopeptidase DegS BE933_06330 AQV34636 621106 622044 - malate_dehydrogenase BE933_06335 AQV34637 622479 622949 + arginine_repressor BE933_06340 AQV34638 623314 623577 + hypothetical_protein BE933_06345 AQV34639 623633 623905 - hypothetical_protein BE933_06350 AQV34640 623997 625964 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BE933_06355 AQV34641 625970 626902 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA BE933_06360 AQV34642 626910 627113 - protein_AaeX BE933_06365 AQV34643 627296 628225 + HTH-type_transcriptional_activator_AaeR BE933_06370 AQV34644 628359 629804 - metalloprotease_TldD BE933_06375 BE933_06380 629908 630141 + hypothetical_protein no_locus_tag AQV34645 630234 634034 - DUF3971_domain-containing_protein BE933_06385 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AQV34623 97 507 100.0 1e-178 PJR32597.1 AQV34624 99 456 100.0 1e-160 PJR32598.1 AQV34625 99 990 100.0 0.0 PJR32599.1 AQV34626 100 611 100.0 0.0 PJR32600.1 AQV34627 99 536 100.0 0.0 >> 148. CP017980_0 Source: Escherichia coli strain CH611_eco genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3100 Table of genes, locations, strands and annotations of subject cluster: ARQ24553 2545660 2547105 + metalloprotease_TldD BMI82_12640 ARQ24554 2547239 2548168 - transcriptional_regulator BMI82_12645 ARQ26605 2548351 2548554 + transporter BMI82_12650 ARQ24555 2548562 2549494 + efflux_transporter_periplasmic_adaptor_subunit BMI82_12655 ARQ24556 2549500 2551467 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BMI82_12660 ARQ24557 2551559 2551831 + hypothetical_protein BMI82_12665 ARQ24558 2551887 2552150 - hypothetical_protein BMI82_12670 ARQ24559 2552515 2552985 - arginine_repressor BMI82_12675 ARQ24560 2553420 2554358 + malate_dehydrogenase BMI82_12680 ARQ24561 2554421 2555488 - outer_membrane-stress_sensor_serine endopeptidase DegS BMI82_12685 ARQ24562 2555578 2556945 - serine_endoprotease_DegQ BMI82_12690 ARQ26606 2557099 2557497 - hypothetical_protein BMI82_12695 ARQ24563 2557691 2558818 + cell_division_protein_ZapE BMI82_12700 ARQ24564 2559037 2559465 + 50S_ribosomal_protein_L13 BMI82_12705 ARQ24565 2559481 2559873 + 30S_ribosomal_protein_S9 BMI82_12710 ARQ24566 2560268 2560906 + stringent_starvation_protein_A sspA ARQ24567 2560912 2561409 + ClpXP_protease_specificity-enhancing_factor BMI82_12720 ARQ24568 2561452 2562819 - C4-dicarboxylate_transporter BMI82_12725 ARQ24569 2563199 2563990 + transcriptional_regulator_NanR BMI82_12730 ARQ24570 2564112 2565005 + N-acetylneuraminate_lyase BMI82_12735 ARQ24571 2565114 2566604 + MFS_transporter BMI82_12740 ARQ24572 2566652 2567341 + N-acetylmannosamine-6-phosphate_2-epimerase BMI82_12745 ARQ24573 2567338 2568213 + N-acetylmannosamine_kinase BMI82_12750 ARQ24574 2568210 2568674 + hypothetical_protein BMI82_12755 BMI82_12760 2568734 2569720 - hypothetical_protein no_locus_tag ARQ24575 2569682 2570008 + hypothetical_protein BMI82_12765 ARQ24576 2570008 2570895 + transposase BMI82_12770 BMI82_12775 2570861 2570944 + restriction_endonuclease no_locus_tag ARQ24577 2571359 2572075 - hypothetical_protein BMI82_12780 ARQ24578 2572072 2572617 - hypothetical_protein BMI82_12785 ARQ24579 2572614 2574995 - fimbrial_protein BMI82_12790 ARQ24580 2575016 2575690 - fimbrial_chaperone_protein BMI82_12795 ARQ24581 2575862 2576626 - glutamate_synthase_operon_protein_GltF BMI82_12800 ARQ24582 2577186 2578604 - glutamate_synthase BMI82_12805 ARQ26607 2578617 2583077 - glutamate_synthase_large_subunit BMI82_12810 ARQ26608 2583752 2584681 + TIGR01212_family_radical_SAM_protein BMI82_12815 ARQ24583 2584777 2587113 + aerobic_respiration_two-component_sensor histidine kinase ArcB BMI82_12820 ARQ24584 2587343 2587996 + isoprenoid_biosynthesis_protein_ElbB BMI82_12825 ARQ24585 2587993 2588721 + monofunctional_biosynthetic_peptidoglycan transglycosylase BMI82_12830 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 ARQ24573 97 507 100.0 1e-178 PJR32597.1 ARQ24572 99 456 100.0 1e-160 PJR32598.1 ARQ24571 99 990 100.0 0.0 PJR32599.1 ARQ24570 100 611 100.0 0.0 PJR32600.1 ARQ24569 99 536 100.0 0.0 >> 149. CP016755_0 Source: Escherichia coli strain FORC_044 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3065 Table of genes, locations, strands and annotations of subject cluster: ASL57300 542682 544127 + TldD_protein,_part_of_TldE_proteolytic_complex FORC44_0547 ASL57301 544261 545172 - LysR_family_transcriptional_regulator_QseA FORC44_0548 ASL57302 545304 545576 + putative_membrane_protein FORC44_0549 ASL57303 545584 546513 + Membrane_fusion_component_of_tripartite multidrug resistance system FORC44_0550 ASL57304 546519 548486 + Fusaric_acid_resistance_protein_FUSB FORC44_0551 ASL57305 548578 548850 + putative_ribonuclease_inhibitor FORC44_0552 ASL57306 548906 549169 - putative_exported_protein FORC44_0553 ASL57307 549534 550004 - Arginine_pathway_regulatory_protein_ArgR, repressor of arg regulon FORC44_0554 ASL57308 550439 551377 + Malate_dehydrogenase FORC44_0555 ASL57309 551441 552508 - Outer_membrane_stress_sensor_protease_DegS FORC44_0556 ASL57310 552598 553965 - Outer_membrane_stress_sensor_protease_DegQ, serine protease FORC44_0557 ASL57311 554119 554517 - cytochrome_d_ubiquinol_oxidase_subunit_III (Cytochrome bd-I oxidase subunit III) FORC44_0558 ASL57312 554711 555838 + ATPase,_AFG1_family FORC44_0559 ASL57313 556057 556485 + LSU_ribosomal_protein_L13p_(L13Ae) FORC44_0560 ASL57314 556501 556893 + SSU_ribosomal_protein_S9p_(S16e) FORC44_0561 ASL57315 557288 557926 + Stringent_starvation_protein_A FORC44_0562 ASL57316 557932 558429 + ClpXP_protease_specificity-enhancing_factor FORC44_0563 ASL57317 558464 559828 - cryptic_C4-dicarboxylate_transporter_DcuD FORC44_0564 ASL57318 560217 560999 + Transcriptional_regulator_NanR FORC44_0565 ASL57319 561121 562014 + N-acetylneuraminate_lyase FORC44_0566 ASL57320 562123 563613 + Sialic_acid_transporter_(permease)_NanT FORC44_0567 ASL57321 563661 564350 + N-acetylmannosamine-6-phosphate_2-epimerase FORC44_0568 ASL57322 564347 565222 + N-acetylmannosamine_kinase FORC44_0569 ASL57323 565219 565683 + sugar_isomerase_involved_in_processing_of exogenous sialic acid FORC44_0570 ASL57324 565743 566792 - uncharacterized_protein_YhcG FORC44_0571 ASL57325 566976 568394 - Glutamate_synthase_(NADPH)_small_chain FORC44_0572 ASL57326 568407 570470 - Glutamate_synthase FORC44_0573 ASL57327 570572 572752 - glutamate_synthase FORC44_0574 ASL57328 573540 574469 + radical_SAM_protein FORC44_0575 ASL57329 574565 576901 + Aerobic_respiration_control_sensor_protein_arcB FORC44_0576 ASL57330 577131 577784 + Sigma_cross-reacting_protein_27A FORC44_0577 ASL57331 577781 578509 + Monofunctional_biosynthetic_peptidoglycan transglycosylase FORC44_0578 ASL57332 578506 579138 - uncharacterized_protein_YrbL FORC44_0579 ASL57333 579352 579564 - Phosphocarrier_protein FORC44_0580 ASL57334 579621 580475 - Hypothetical_protein FORC44_0581 ASL57335 580521 581012 - PTS_system_nitrogen-specific_IIA_component, PtsN FORC44_0582 ASL57336 581130 581417 - Ribosome_hibernation_protein_YhbH FORC44_0583 ASL57337 581440 582873 - RNA_polymerase_sigma-54_factor_RpoN FORC44_0584 ASL57338 582921 583646 - Lipopolysaccharide_ABC_transporter,_ATP-binding protein LptB FORC44_0585 ASL57339 583653 584210 - LptA,_protein_essential_for_LPS_transport_across the periplasm FORC44_0586 ASL57340 584179 584754 - Uncharacterized_protein_YrbK_clustered_with lipopolysaccharide transporters FORC44_0587 ASL57341 584751 585317 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase FORC44_0588 ASL57342 585338 586324 - Arabinose_5-phosphate_isomerase FORC44_0589 ASL57343 586338 587315 - Inner_membrane_protein_YrbG,_predicted calcium:proton antiporter FORC44_0590 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ASL57324 100 723 100.0 0.0 PJR32595.1 ASL57323 100 318 100.0 6e-109 PJR32596.1 ASL57322 100 570 100.0 0.0 PJR32597.1 ASL57321 100 461 100.0 2e-162 PJR32598.1 ASL57320 100 993 100.0 0.0 >> 150. CP008957_0 Source: Escherichia coli O157:H7 str. EDL933, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3065 Table of genes, locations, strands and annotations of subject cluster: AIG70573 4171246 4172232 + Arabinose_5-phosphate_isomerase EDL933_4425 AIG70574 4172253 4172819 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase EDL933_4426 AIG70575 4172816 4173391 + Uncharacterized_protein_YrbK_clustered_with lipopolysaccharide transporters EDL933_4427 AIG70576 4173360 4173917 + LptA,_protein_essential_for_LPS_transport_across the periplasm EDL933_4428 AIG70577 4173924 4174649 + Lipopolysaccharide_ABC_transporter,_ATP-binding protein LptB EDL933_4429 AIG70578 4174697 4176130 + RNA_polymerase_sigma-54_factor_RpoN EDL933_4430 AIG70579 4176153 4176440 + Ribosome_hibernation_protein_YhbH EDL933_4431 AIG70580 4176558 4177049 + PTS_IIA-like_nitrogen-regulatory_protein_PtsN EDL933_4432 AIG70581 4177095 4177949 + putative_P-loop-containing_kinase EDL933_4433 AIG70582 4178006 4178218 + Phosphocarrier_protein,_nitrogen_regulation associated EDL933_4434 AIG70583 4178432 4179064 + Putative_uncharacterized_protein_YrbL EDL933_4435 AIG70584 4179061 4179789 - Monofunctional_biosynthetic_peptidoglycan transglycosylase EDL933_4436 AIG70585 4179786 4180439 - Sigma_cross-reacting_protein_27A EDL933_4437 AIG70586 4180669 4183005 - Aerobic_respiration_control_sensor_protein_arcB EDL933_4438 AIG70587 4183101 4184030 - putative_Fe-S_oxidoreductase EDL933_4439 AIG70588 4184611 4189164 + Glutamate_synthase_[NADPH]_large_chain EDL933_4440 AIG70589 4189177 4190595 + Glutamate_synthase_[NADPH]_small_chain EDL933_4441 AIG70590 4190779 4191828 + Putative_uncharacterized_protein_YhcG EDL933_4442 AIG70591 4191888 4192352 - Putative_sugar_isomerase_involved_in_processing of exogenous sialic acid EDL933_4443 AIG70592 4192349 4193224 - N-acetylmannosamine_kinase EDL933_4444 AIG70593 4193221 4193910 - N-acetylmannosamine-6-phosphate_2-epimerase EDL933_4445 AIG70594 4193958 4195448 - Sialic_acid_transporter_(permease)_NanT EDL933_4446 AIG70595 4195557 4196450 - N-acetylneuraminate_lyase EDL933_4447 AIG70596 4196572 4197354 - Transcriptional_regulator_NanR EDL933_4448 AIG70597 4197743 4199107 + Putative_cryptic_C4-dicarboxylate_transporter DcuD EDL933_4449 AIG70598 4199142 4199639 - ClpXP_protease_specificity-enhancing_factor EDL933_4450 AIG70599 4199645 4200283 - Stringent_starvation_protein_A EDL933_4451 AIG70600 4200678 4201070 - SSU_ribosomal_protein_S9p_(S16e) EDL933_4452 AIG70601 4201086 4201514 - LSU_ribosomal_protein_L13p_(L13Ae) EDL933_4453 AIG70602 4201733 4202860 - ATPase,_AFG1_family EDL933_4454 AIG70603 4203054 4203452 + Putative_cytochrome_d_ubiquinol_oxidase_subunit III (Cytochrome bd-I oxidase subunit III) EDL933_4455 AIG70604 4203606 4204973 + Outer_membrane_stress_sensor_protease_DegQ, serine protease EDL933_4456 AIG70605 4205063 4206130 + Outer_membrane_stress_sensor_protease_DegS EDL933_4457 AIG70606 4206194 4207132 - Malate_dehydrogenase EDL933_4458 AIG70607 4207567 4208037 + Arginine_pathway_regulatory_protein_ArgR, repressor of arg regulon EDL933_4459 AIG70608 4208402 4208665 + putative_exported_protein EDL933_4460 AIG70609 4208721 4208993 - putative_ribonuclease_inhibitor EDL933_4461 AIG70610 4209085 4211052 - Fusaric_acid_resistance_protein_FusB EDL933_4462 AIG70611 4211058 4211987 - Fusaric_acid_resistance_protein_fusE EDL933_4463 AIG70612 4211995 4212267 - putative_membrane_protein EDL933_4464 AIG70613 4212399 4213310 + Putative_transcriptional_regulator_LYSR-type EDL933_4465 AIG70614 4213444 4214889 - TldD_protein,_part_of_TldE/TldD_proteolytic complex EDL933_4466 AIG70615 4215045 4218845 - putative_exported_protein EDL933_4467 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AIG70590 100 723 100.0 0.0 PJR32595.1 AIG70591 100 318 100.0 6e-109 PJR32596.1 AIG70592 100 570 100.0 0.0 PJR32597.1 AIG70593 100 461 100.0 2e-162 PJR32598.1 AIG70594 100 993 100.0 0.0 >> 151. CP031919_0 Source: Escherichia coli O145:NM strain FWSEC0002 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3028 Table of genes, locations, strands and annotations of subject cluster: QCH91929 542504 543949 + metalloprotease_TldD tldD QCH91930 544077 545006 - HTH-type_transcriptional_activator_AaeR aaeR QCH91931 545189 545392 + protein_AaeX CCU01_002890 QCH91932 545400 546332 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCH91933 546338 548305 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCH91934 548397 548669 + hypothetical_protein CCU01_002905 QCH91935 548725 548988 - DUF1471_domain-containing_protein CCU01_002910 QCH91936 549353 549823 - transcriptional_regulator_ArgR argR QCH91937 550258 551196 + malate_dehydrogenase CCU01_002920 QCH91938 551259 552326 - outer_membrane-stress_sensor_serine endopeptidase DegS CCU01_002925 QCH91939 552416 553783 - periplasmic_pH-dependent_serine_endoprotease DegQ CCU01_002930 QCH91940 553937 554335 - DUF1043_family_protein CCU01_002935 QCH91941 554529 555656 + cell_division_protein_ZapE zapE QCH91942 555875 556303 + 50S_ribosomal_protein_L13 CCU01_002945 QCH91943 556319 556711 + 30S_ribosomal_protein_S9 CCU01_002950 QCH91944 556629 556850 - hypothetical_protein CCU01_002955 QCH96680 556955 557164 - hypothetical_protein CCU01_002960 QCH91945 557106 557744 + stringent_starvation_protein_A CCU01_002965 QCH91946 557750 558247 + stringent_starvation_protein_B CCU01_002970 QCH91947 558289 559656 - C4-dicarboxylate_transporter_DcuC dcuC CCU01_002980 559656 559766 + transposase no_locus_tag QCH91948 560027 560818 + transcriptional_regulator_NanR CCU01_002985 QCH91949 560940 561833 + N-acetylneuraminate_lyase nanA QCH91950 561942 563432 + MFS_transporter CCU01_002995 QCH91951 563480 564169 + N-acetylmannosamine-6-phosphate_2-epimerase CCU01_003000 QCH91952 564166 565041 + ROK_family_protein CCU01_003005 QCH91953 565038 565502 + YhcH/YjgK/YiaL_family_protein CCU01_003010 QCH91954 565562 566689 - DUF1016_domain-containing_protein CCU01_003015 QCH91955 566873 568291 - glutamate_synthase_small_subunit CCU01_003020 QCH91956 568304 572764 - glutamate_synthase_large_subunit CCU01_003025 CCU01_003030 572687 572913 + hypothetical_protein no_locus_tag QCH91957 572811 573047 + hypothetical_protein CCU01_003035 QCH96681 573439 574368 + TIGR01212_family_radical_SAM_protein CCU01_003040 QCH91958 574464 576800 + hybrid_sensor_histidine_kinase/response regulator CCU01_003045 QCH91959 577030 577683 + glutamine_amidotransferase CCU01_003050 QCH91960 577680 578408 + monofunctional_biosynthetic_peptidoglycan transglycosylase CCU01_003055 QCH91961 578405 579037 - PhoP_regulatory_network_protein_YrbL yrbL QCH91962 579250 579522 - phosphocarrier_protein_NPr CCU01_003065 QCH91963 579519 580373 - RNase_adaptor_protein_RapZ CCU01_003070 QCH91964 580419 580910 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QCH91965 581028 581315 - ribosome_hibernation_promoting_factor CCU01_003080 QCH91966 581338 582771 - RNA_polymerase_sigma-54_factor CCU01_003085 QCH91967 582819 583544 - ABC_transporter_ATP-binding_protein CCU01_003090 QCH91968 583551 584108 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QCH91969 584077 584652 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCH91970 584649 585215 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC CCU01_003105 QCH91971 585236 586222 - arabinose_5-phosphate_isomerase_KdsD CCU01_003110 QCH91972 586236 587213 - calcium/sodium_antiporter CCU01_003115 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCH91954 91 698 107.449856734 0.0 PJR32595.1 QCH91953 100 318 100.0 6e-109 PJR32596.1 QCH91952 98 561 100.0 0.0 PJR32597.1 QCH91951 100 461 100.0 2e-162 PJR32598.1 QCH91950 99 990 100.0 0.0 >> 152. AP019708_0 Source: Escherichia coli O145:H28 122715 DNA, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3028 Table of genes, locations, strands and annotations of subject cluster: BBK59480 3950132 3951118 + D-arabinose_5-phosphate_isomerase kdsD BBK59481 3951139 3951705 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC BBK59482 3951702 3952277 + periplasmic_membrane-anchored_LPS-binding protein lptC BBK59483 3952246 3952803 + lipopolysaccharide_export_system_protein_LptA lptA BBK59484 3952810 3953535 + lipopolysaccharide_export_system_ATP-binding protein LptB lptB BBK59485 3953583 3955016 + RNA_polymerase_sigma_54_factor_RpoN rpoN BBK59486 3955039 3955326 + ribosome_hibernation_promoting_factor_HPF hpf BBK59487 3955444 3955935 + sugar-specific_enzyme_IIA_component_of_PTS ptsN BBK59488 3955981 3956835 + RNase_adaptor_protein yhbJ BBK59489 3956832 3957104 + phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system npr BBK59490 3957317 3957949 + PKc-like_family_protein yrbL BBK59491 3957946 3958674 - biosynthetic_peptidoglycan_transglycosylase mtgA BBK59492 3958671 3959324 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB BBK59493 3959554 3961890 - aerobic_respiration_control_sensor_histidine protein kinase arcB BBK59494 3961986 3962915 - Fe-S_oxidoreductase yhcC BBK59495 3963497 3968050 + glutamate_synthase_large_subunit gltB BBK59496 3968063 3969481 + glutamate_synthase_small_subunit gltD BBK59497 3969665 3970792 + DUF1016_domain-containing_protein yhcG BBK59498 3970852 3971316 - DUF386_family_protein yhcH BBK59499 3971313 3972188 - N-acetylmannosamine_kinase nanK BBK59500 3972185 3972874 - N-acetylmannosamine-6-P_epimerase nanE BBK59501 3972922 3974412 - sialic_acid_transporter nanT BBK59502 3974521 3975414 - N-acetylneuraminate_lyase nanA BBK59503 3975536 3976327 - DNA-binding_transcriptional_regulator,_GntR family nanR BBK59504 3976698 3978065 + transporter dcuD BBK59505 3978107 3978604 - ClpXP_protease_specificity_enhancing_factor sspB BBK59506 3978610 3979248 - stringent_starvation_protein_A sspA BBK59507 3979643 3980035 - 30S_ribosomal_subunit_protein_S9 rpsI BBK59508 3980051 3980479 - 50S_ribosomal_subunit_protein_L13 rplM BBK59509 3980698 3981825 - cell_division_protein_ZapE zapE BBK59510 3982019 3982417 + DUF1043_family_protein yhcB BBK59511 3982571 3983938 + serine_endoprotease degQ BBK59512 3984028 3985095 + serine_endoprotease degS BBK59513 3985158 3986096 - malate_dehydrogenase mdh BBK59514 3986531 3987001 + arginine_repressor argR BBK59515 3987366 3987629 + DUF1471_family_protein yhcN BBK59516 3987685 3987957 - barnase_inhibitor yhcO BBK59517 3988049 3990016 - p-hydroxybenzoic_acid_efflux_system_component aaeB BBK59518 3990022 3990954 - p-hydroxybenzoic_acid_efflux_system_component aaeA BBK59519 3990962 3991165 - membrane_protein_AaeX_of_efflux_system aaeX BBK59520 3991348 3992277 + transcriptional_regulator aaeR BBK59521 3992405 3993850 - protease_TldD tldD BBK59522 3994006 3997806 - DUF3971_domain-containing_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 BBK59497 91 698 107.449856734 0.0 PJR32595.1 BBK59498 100 318 100.0 6e-109 PJR32596.1 BBK59499 98 561 100.0 0.0 PJR32597.1 BBK59500 100 461 100.0 2e-162 PJR32598.1 BBK59501 99 990 100.0 0.0 >> 153. AP019706_0 Source: Escherichia coli O145:H28 112648 DNA, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3028 Table of genes, locations, strands and annotations of subject cluster: BBK54442 4051780 4052766 + D-arabinose_5-phosphate_isomerase kdsD BBK54443 4052787 4053353 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC BBK54444 4053350 4053925 + periplasmic_membrane-anchored_LPS-binding protein lptC BBK54445 4053894 4054451 + lipopolysaccharide_export_system_protein_LptA lptA BBK54446 4054458 4055183 + lipopolysaccharide_export_system_ATP-binding protein LptB lptB BBK54447 4055231 4056664 + RNA_polymerase_sigma_54_factor_RpoN rpoN BBK54448 4056687 4056974 + ribosome_hibernation_promoting_factor_HPF hpf BBK54449 4057092 4057583 + sugar-specific_enzyme_IIA_component_of_PTS ptsN BBK54450 4057629 4058483 + RNase_adaptor_protein yhbJ BBK54451 4058480 4058752 + phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system npr BBK54452 4058965 4059597 + PKc-like_family_protein yrbL BBK54453 4059594 4060322 - biosynthetic_peptidoglycan_transglycosylase mtgA BBK54454 4060319 4060972 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB BBK54455 4061202 4063538 - aerobic_respiration_control_sensor_histidine protein kinase arcB BBK54456 4063634 4064563 - Fe-S_oxidoreductase yhcC BBK54457 4065145 4069698 + glutamate_synthase_large_subunit gltB BBK54458 4069711 4071129 + glutamate_synthase_small_subunit gltD BBK54459 4071313 4072440 + DUF1016_domain-containing_protein yhcG BBK54460 4072500 4072964 - DUF386_family_protein yhcH BBK54461 4072961 4073836 - N-acetylmannosamine_kinase nanK BBK54462 4073833 4074522 - N-acetylmannosamine-6-P_epimerase nanE BBK54463 4074570 4076060 - sialic_acid_transporter nanT BBK54464 4076169 4077062 - N-acetylneuraminate_lyase nanA BBK54465 4077184 4077975 - DNA-binding_transcriptional_regulator,_GntR family nanR BBK54466 4078346 4079713 + transporter dcuD BBK54467 4079755 4080252 - ClpXP_protease_specificity_enhancing_factor sspB BBK54468 4080258 4080896 - stringent_starvation_protein_A sspA BBK54469 4081291 4081683 - 30S_ribosomal_subunit_protein_S9 rpsI BBK54470 4081699 4082127 - 50S_ribosomal_subunit_protein_L13 rplM BBK54471 4082346 4083473 - cell_division_protein_ZapE zapE BBK54472 4083667 4084065 + DUF1043_family_protein yhcB BBK54473 4084219 4085586 + serine_endoprotease degQ BBK54474 4085676 4086743 + serine_endoprotease degS BBK54475 4086806 4087744 - malate_dehydrogenase mdh BBK54476 4088179 4088649 + arginine_repressor argR BBK54477 4089014 4089277 + DUF1471_family_protein yhcN BBK54478 4089333 4089605 - barnase_inhibitor yhcO BBK54479 4089697 4091664 - p-hydroxybenzoic_acid_efflux_system_component aaeB BBK54480 4091670 4092602 - p-hydroxybenzoic_acid_efflux_system_component aaeA BBK54481 4092610 4092813 - membrane_protein_AaeX_of_efflux_system aaeX BBK54482 4092996 4093925 + transcriptional_regulator aaeR BBK54483 4094053 4095498 - protease_TldD tldD BBK54484 4095654 4099454 - DUF3971_domain-containing_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 BBK54459 91 698 107.449856734 0.0 PJR32595.1 BBK54460 100 318 100.0 6e-109 PJR32596.1 BBK54461 98 561 100.0 0.0 PJR32597.1 BBK54462 100 461 100.0 2e-162 PJR32598.1 BBK54463 99 990 100.0 0.0 >> 154. AP019703_0 Source: Escherichia coli O145:H28 10942 DNA, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 3028 Table of genes, locations, strands and annotations of subject cluster: BBK49191 3942051 3943037 + D-arabinose_5-phosphate_isomerase kdsD BBK49192 3943058 3943624 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC BBK49193 3943621 3944196 + periplasmic_membrane-anchored_LPS-binding protein lptC BBK49194 3944165 3944722 + lipopolysaccharide_export_system_protein_LptA lptA BBK49195 3944729 3945454 + lipopolysaccharide_export_system_ATP-binding protein LptB lptB BBK49196 3945502 3946935 + RNA_polymerase_sigma_54_factor_RpoN rpoN BBK49197 3946958 3947245 + ribosome_hibernation_promoting_factor_HPF hpf BBK49198 3947363 3947854 + sugar-specific_enzyme_IIA_component_of_PTS ptsN BBK49199 3947900 3948754 + RNase_adaptor_protein yhbJ BBK49200 3948751 3949023 + phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system npr BBK49201 3949236 3949868 + PKc-like_family_protein yrbL BBK49202 3949865 3950593 - biosynthetic_peptidoglycan_transglycosylase mtgA BBK49203 3950590 3951243 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB BBK49204 3951473 3953809 - aerobic_respiration_control_sensor_histidine protein kinase arcB BBK49205 3953905 3954834 - Fe-S_oxidoreductase yhcC BBK49206 3955416 3959969 + glutamate_synthase_large_subunit gltB BBK49207 3959982 3961400 + glutamate_synthase_small_subunit gltD BBK49208 3961584 3962711 + DUF1016_domain-containing_protein yhcG BBK49209 3962771 3963235 - DUF386_family_protein yhcH BBK49210 3963232 3964107 - N-acetylmannosamine_kinase nanK BBK49211 3964104 3964793 - N-acetylmannosamine-6-P_epimerase nanE BBK49212 3964841 3966331 - sialic_acid_transporter nanT BBK49213 3966440 3967333 - N-acetylneuraminate_lyase nanA BBK49214 3967455 3968246 - DNA-binding_transcriptional_regulator,_GntR family nanR BBK49215 3968617 3969984 + transporter dcuD BBK49216 3970026 3970523 - ClpXP_protease_specificity_enhancing_factor sspB BBK49217 3970529 3971167 - stringent_starvation_protein_A sspA BBK49218 3971562 3971954 - 30S_ribosomal_subunit_protein_S9 rpsI BBK49219 3971970 3972398 - 50S_ribosomal_subunit_protein_L13 rplM BBK49220 3972617 3973744 - cell_division_protein_ZapE zapE BBK49221 3973938 3974336 + DUF1043_family_protein yhcB BBK49222 3974490 3975857 + serine_endoprotease degQ BBK49223 3975947 3977014 + serine_endoprotease degS BBK49224 3977077 3978015 - malate_dehydrogenase mdh BBK49225 3978450 3978920 + arginine_repressor argR BBK49226 3979285 3979548 + DUF1471_family_protein yhcN yhcO 3979604 3979857 - not_annotated no_locus_tag BBK49227 3979949 3981916 - p-hydroxybenzoic_acid_efflux_system_component aaeB BBK49228 3981922 3982854 - p-hydroxybenzoic_acid_efflux_system_component aaeA BBK49229 3982862 3983065 - membrane_protein_AaeX_of_efflux_system aaeX BBK49230 3983248 3984177 + transcriptional_regulator aaeR BBK49231 3984305 3985750 - protease_TldD tldD BBK49232 3985906 3989706 - DUF3971_domain-containing_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 BBK49208 91 698 107.449856734 0.0 PJR32595.1 BBK49209 100 318 100.0 6e-109 PJR32596.1 BBK49210 98 561 100.0 0.0 PJR32597.1 BBK49211 100 461 100.0 2e-162 PJR32598.1 BBK49212 99 990 100.0 0.0 >> 155. CP000034_0 Source: Shigella dysenteriae Sd197, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 2984 Table of genes, locations, strands and annotations of subject cluster: ABB63369 3132515 3133501 + putative_isomerase yrbH ABB63370 3133522 3134088 + conserved_hypothetical_protein yrbI ABB63371 3134085 3134660 + conserved_hypothetical_protein yrbK ABB63372 3134629 3135186 + conserved_hypothetical_protein yhbN ABB63373 3135193 3135918 + putative_ATP-binding_component_of_a_transport system yhbG ABB63374 3135966 3137399 + RNA_polymerase,_sigma(54_or_60)_factor rpoN ABB63375 3137422 3137709 + probable_sigma-54_modulation_protein yhbH ABB63376 3137827 3138318 + phosphotransferase_system_enzyme_IIA ptsN ABB63377 3138364 3139218 + conserved_hypothetical_protein yhbJ ABB63378 3139215 3139487 + phosphocarrier_protein_HPr-like_NPr ptsO ABB63379 3139701 3140333 + conserved_hypothetical_protein yrbL ABB63380 3140330 3141058 - putative_peptidoglycan_enzyme mtgA ABB63381 3141055 3141717 - sigma_cross-reacting_protein_27A yhbL ABB63382 3141938 3144274 - aerobic_respiration_sensor-response_protein arcB ABB63383 3144370 3145299 - conserved_hypothetical_protein yhcC ABB63384 3145973 3150433 + glutamate_synthase,_large_subunit gltB ABB63385 3150446 3151864 + glutamate_synthase,_small_subunit gltD ABB63386 3152048 3153175 + conserved_hypothetical_protein yhcG ABB63387 3153235 3153699 - conserved_hypothetical_protein yhcH ABB63388 3153696 3154604 - putative_NAGC-like_transcriptional_regulator yhcI ABB63389 3154568 3155257 - putative_enzyme yhcJ ABB63390 3155305 3156825 - sialic_acid_transporter nanT ABB63391 3156904 3157797 - N-acetylneuraminate_lyase nanA ABB63392 3157991 3158782 - putative_FADA-type_transcriptional_regulator yhcK ABB63393 3159109 3159465 - iso-IS1_ORF2 SDY_3402 ABB63394 3160299 3160796 - stringent_starvation_protein_B sspB ABB63395 3160802 3161440 - stringent_starvation_protein_A sspA ABB63396 3161834 3162226 - 30S_ribosomal_subunit_protein_S9 rpsI ABB63397 3162242 3162670 - 50S_ribosomal_subunit_protein_L13 rplM ABB63398 3162889 3164016 - conserved_hypothetical_protein yhcM ABB63399 3164204 3164608 + conserved_hypothetical_protein yhcB ABB63400 3164762 3166129 + serine_endoprotease degQ ABB63401 3166219 3167286 + protease degS ABB63402 3167349 3168287 - malate_dehydrogenase mdh ABB63403 3168722 3169192 + repressor_of_arg_regulon argR ABB63404 3169557 3169820 + conserved_hypothetical_protein yhcN ABB63405 3169876 3170148 - conserved_hypothetical_protein yhcO ABB63406 3170240 3172207 - conserved_hypothetical_protein yhcP ABB63407 3172213 3173145 - putative_membrane_protein yhcQ ABB63408 3173153 3173425 - conserved_hypothetical_protein yhcR ABB63409 3173539 3174468 + quorum_sensing_regulator_A qseA ABB63410 3174596 3176041 - CsrA_inhibitory_activity_suppressor tldD ABB63411 3176197 3179997 - Uncharacterized_membrane_protein yhdRP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ABB63386 92 707 107.449856734 0.0 PJR32595.1 ABB63387 99 317 100.0 2e-108 PJR32596.1 ABB63388 97 511 100.0 4e-180 PJR32597.1 ABB63389 99 459 100.0 8e-162 PJR32598.1 ABB63390 99 990 100.0 0.0 >> 156. CP028110_0 Source: Escherichia coli O121 str. RM8352 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 7 MultiGeneBlast score: 7.0 Cumulative Blast bit score: 2877 Table of genes, locations, strands and annotations of subject cluster: AWJ27739 2824323 2825768 + metalloprotease_TldD I3S_14905 AWJ27740 2825896 2826825 - HTH-type_transcriptional_activator_AaeR I3S_14910 AWJ27741 2827008 2827211 + protein_AaeX I3S_14915 AWJ27742 2827219 2828151 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA I3S_14920 AWJ27743 2828157 2830124 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB I3S_14925 AWJ27744 2830216 2830488 + hypothetical_protein I3S_14930 AWJ27745 2830544 2830807 - DUF1471_domain-containing_protein I3S_14935 AWJ27746 2831172 2831642 - arginine_repressor I3S_14940 AWJ27747 2832077 2833015 + malate_dehydrogenase I3S_14945 AWJ27748 2833078 2834145 - serine_endoprotease_DegS I3S_14950 AWJ27749 2834235 2835602 - serine_endoprotease_DegQ I3S_14955 AWJ27750 2835756 2836154 - hypothetical_protein I3S_14960 AWJ27751 2836348 2837475 + cell_division_protein_ZapE I3S_14965 AWJ27752 2837694 2838122 + 50S_ribosomal_protein_L13 I3S_14970 AWJ27753 2838138 2838530 + 30S_ribosomal_protein_S9 I3S_14975 AWJ30263 2838774 2838983 - hypothetical_protein I3S_14980 AWJ27754 2838925 2839563 + stringent_starvation_protein_A I3S_14985 AWJ27755 2839569 2840066 + stringent_starvation_protein_B I3S_14990 AWJ27756 2840109 2841476 - C4-dicarboxylate_transporter I3S_14995 I3S_15000 2841476 2841586 + transposase no_locus_tag AWJ27757 2841856 2842647 + transcriptional_regulator_NanR nanR AWJ27758 2842769 2843662 + N-acetylneuraminate_lyase nanA AWJ27759 2843771 2845261 + MFS_transporter I3S_15015 AWJ27760 2845309 2845998 + N-acetylmannosamine-6-phosphate_2-epimerase I3S_15020 AWJ27761 2845995 2846870 + N-acetylmannosamine_kinase I3S_15025 AWJ27762 2846867 2847331 + YhcH/YjgK/YiaL_family_protein I3S_15030 AWJ27763 2847391 2848503 - DUF1016_domain-containing_protein I3S_15035 AWJ27764 2848687 2850105 - glutamate_synthase I3S_15040 AWJ27765 2850118 2854578 - glutamate_synthase_large_subunit I3S_15045 I3S_15050 2854501 2854727 + hypothetical_protein no_locus_tag AWJ27766 2854625 2854861 + hypothetical_protein I3S_15055 AWJ30264 2855253 2856182 + TIGR01212_family_radical_SAM_protein I3S_15060 AWJ27767 2856278 2858614 + hybrid_sensor_histidine_kinase/response regulator I3S_15065 AWJ27768 2858844 2859497 + glutamine_amidotransferase I3S_15070 AWJ27769 2859494 2860222 + monofunctional_biosynthetic_peptidoglycan transglycosylase I3S_15075 AWJ27770 2860219 2860851 - protein_YrbL yrbL AWJ27771 2861065 2861337 - phosphocarrier_protein_NPr I3S_15085 AWJ27772 2861334 2862188 - RNase_adaptor_protein_RapZ I3S_15090 AWJ27773 2862234 2862713 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN I3S_15095 AWJ27774 2862831 2863118 - ribosome_hibernation_promoting_factor I3S_15100 AWJ27775 2863141 2864574 - RNA_polymerase_sigma-54_factor I3S_15105 AWJ27776 2864622 2865347 - lipopolysaccharide_ABC_transporter_ATP-binding protein I3S_15110 AWJ27777 2865354 2865911 - LPS_ABC_transporter_substrate-binding_protein LptA I3S_15115 AWJ27778 2865880 2866455 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC AWJ27779 2866452 2867018 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC AWJ27780 2867039 2868025 - arabinose_5-phosphate_isomerase_KdsD I3S_15130 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AWJ27762 98 311 100.0 7e-106 PJR32596.1 AWJ27761 97 509 100.0 1e-179 PJR32597.1 AWJ27760 99 456 100.0 1e-160 PJR32598.1 AWJ27759 99 990 100.0 0.0 PJR32599.1 AWJ27758 100 611 100.0 0.0 >> 157. CP048604_0 Source: Escherichia coli strain PapRG-06-3 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3293 Table of genes, locations, strands and annotations of subject cluster: QIB16423 3490715 3492160 + metalloprotease_TldD tldD QIB16424 3492288 3493217 - HTH-type_transcriptional_activator_AaeR aaeR QIB16425 3493400 3493603 + AaeX_family_protein G3M72_16615 QIB16426 3493611 3494543 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QIB16427 3494549 3496516 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIB16428 3496608 3496880 + hypothetical_protein G3M72_16630 QIB16429 3496936 3497199 - peroxide/acid_stress_response_protein_YhcN yhcN QIB16430 3497564 3498034 - transcriptional_regulator_ArgR argR QIB16431 3498469 3499407 + malate_dehydrogenase mdh QIB16432 3499470 3500537 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QIB16433 3500627 3501994 - serine_endoprotease_DegQ degQ QIB16434 3502148 3502546 - DUF1043_family_protein G3M72_16660 QIB16435 3502740 3503867 + cell_division_protein_ZapE G3M72_16665 QIB16436 3504086 3504514 + 50S_ribosomal_protein_L13 rplM QIB16437 3504530 3504922 + 30S_ribosomal_protein_S9 rpsI QIB16438 3505317 3505955 + stringent_starvation_protein_A sspA QIB16439 3505961 3506458 + ClpXP_protease_specificity-enhancing_factor sspB QIB16440 3506501 3507868 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIB16441 3508248 3509039 + transcriptional_regulator_NanR nanR QIB16442 3509161 3510054 + N-acetylneuraminate_lyase nanA QIB16443 3510163 3511653 + sialic_acid_transporter_NanT nanT QIB16444 3511701 3512390 + N-acetylmannosamine-6-phosphate_2-epimerase G3M72_16710 QIB16445 3512387 3513262 + N-acetylmannosamine_kinase G3M72_16715 QIB16446 3513259 3513723 + DUF386_domain-containing_protein G3M72_16720 QIB16447 3513783 3514910 - DUF1016_domain-containing_protein G3M72_16725 QIB16448 3515094 3516512 - glutamate_synthase G3M72_16730 QIB17631 3516525 3520985 - glutamate_synthase_large_subunit gltB QIB16449 3521660 3522589 + TIGR01212_family_radical_SAM_protein G3M72_16740 QIB16450 3522685 3525021 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIB16451 3525251 3525904 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIB16452 3525901 3526629 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QIB16453 3526626 3527258 - PhoP_regulatory_network_protein_YrbL yrbL QIB16454 3527472 3527744 - PTS_phosphocarrier_protein_NPr npr QIB16455 3527741 3528595 - RNase_adapter_RapZ rapZ QIB16456 3528641 3529132 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QIB16457 3529250 3529537 - ribosome_hibernation_promoting_factor hpf QIB16458 3529560 3530993 - RNA_polymerase_factor_sigma-54 rpoN QIB16459 3531041 3531766 - LPS_export_ABC_transporter_ATP-binding_protein lptB QIB16460 3531773 3532330 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QIB16461 3532299 3532874 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QIB16462 3532871 3533437 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QIB16463 3533458 3534444 - arabinose-5-phosphate_isomerase_KdsD kdsD QIB16464 3534458 3535435 - calcium/sodium_antiporter G3M72_16815 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QIB16447 92 701 107.449856734 0.0 PJR32597.1 QIB16444 99 456 100.0 1e-160 PJR32598.1 QIB16443 99 990 100.0 0.0 PJR32599.1 QIB16442 100 611 100.0 0.0 PJR32600.1 QIB16441 99 536 100.0 0.0 >> 158. CP023359_0 Source: Escherichia coli strain 1943 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3293 Table of genes, locations, strands and annotations of subject cluster: ATB81411 532662 534107 + metalloprotease_TldD CNQ54_02780 ATB81412 534235 535164 - HTH-type_transcriptional_activator_AaeR CNQ54_02785 ATB81413 535347 535550 + protein_AaeX CNQ54_02790 ATB81414 535558 536490 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CNQ54_02795 ATB81415 536496 538463 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CNQ54_02800 ATB81416 538555 538827 + hypothetical_protein CNQ54_02805 ATB81417 538883 539146 - hypothetical_protein CNQ54_02810 ATB81418 539511 539981 - arginine_repressor CNQ54_02815 ATB81419 540416 541354 + malate_dehydrogenase CNQ54_02820 ATB81420 541416 542483 - serine_endoprotease_DegS CNQ54_02825 ATB81421 542573 543940 - periplasmic_pH-dependent_serine_endoprotease DegQ CNQ54_02830 ATB81422 544094 544492 - hypothetical_protein CNQ54_02835 ATB81423 544686 545813 + cell_division_protein_ZapE CNQ54_02840 ATB81424 546032 546460 + 50S_ribosomal_protein_L13 CNQ54_02845 ATB81425 546476 546868 + 30S_ribosomal_protein_S9 CNQ54_02850 ATB81426 546786 547007 - hypothetical_protein CNQ54_02855 ATB85325 546981 547160 + hypothetical_protein CNQ54_02860 ATB85324 547112 547321 - hypothetical_protein CNQ54_02865 ATB81427 547263 547901 + stringent_starvation_protein_A CNQ54_02870 ATB81428 547907 548404 + stringent_starvation_protein_B CNQ54_02875 ATB81429 548447 549814 - C4-dicarboxylate_transporter CNQ54_02880 CNQ54_02885 549814 549924 + transposase no_locus_tag ATB81430 550194 550985 + transcriptional_regulator_NanR CNQ54_02890 ATB81431 551107 552000 + N-acetylneuraminate_lyase nanA ATB81432 552109 553599 + MFS_transporter CNQ54_02900 ATB81433 553647 554336 + N-acetylmannosamine-6-phosphate_2-epimerase CNQ54_02905 ATB81434 554333 555208 + N-acetylmannosamine_kinase CNQ54_02910 ATB81435 555205 555669 + YhcH/YjgK/YiaL_family_protein CNQ54_02915 ATB81436 555729 556856 - DUF1016_domain-containing_protein CNQ54_02920 ATB81437 557040 558458 - glutamate_synthase CNQ54_02925 ATB81438 558471 562931 - glutamate_synthase_large_subunit CNQ54_02930 CNQ54_02935 562854 563080 + hypothetical_protein no_locus_tag ATB81439 562978 563214 + hypothetical_protein CNQ54_02940 ATB85326 563606 564535 + TIGR01212_family_radical_SAM_protein CNQ54_02945 ATB81440 564631 566967 + hybrid_sensor_histidine_kinase/response regulator CNQ54_02950 ATB81441 567197 567850 + glutamine_amidotransferase CNQ54_02955 ATB81442 567847 568575 + monofunctional_biosynthetic_peptidoglycan transglycosylase CNQ54_02960 ATB81443 568572 569204 - hypothetical_protein CNQ54_02965 ATB81444 569418 569690 - phosphocarrier_protein_NPr CNQ54_02970 ATB81445 569687 570541 - RNase_adaptor_protein_RapZ CNQ54_02975 ATB81446 570587 571078 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN CNQ54_02980 ATB81447 571196 571483 - ribosome_hibernation_promoting_factor CNQ54_02985 ATB81448 571506 572939 - RNA_polymerase_sigma-54_factor CNQ54_02990 ATB81449 572987 573712 - ABC_transporter_ATP-binding_protein lptB ATB81450 573719 574276 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA CNQ54_03000 ATB81451 574245 574820 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC ATB81452 574817 575383 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC CNQ54_03010 ATB81453 575404 576390 - arabinose_5-phosphate_isomerase_KdsD CNQ54_03015 ATB81454 576404 577381 - calcium/sodium_antiporter CNQ54_03020 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ATB81436 92 701 107.449856734 0.0 PJR32597.1 ATB81433 99 456 100.0 1e-160 PJR32598.1 ATB81432 99 990 100.0 0.0 PJR32599.1 ATB81431 100 611 100.0 0.0 PJR32600.1 ATB81430 99 536 100.0 0.0 >> 159. CP010235_1 Source: Escherichia coli strain S40, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3293 Table of genes, locations, strands and annotations of subject cluster: APL67718 4188742 4190187 + protease_TldD tldD APL67719 4190315 4191244 - transcriptional_regulator RG69_20740 APL68950 4191427 4191630 + transporter RG69_20745 APL67720 4191638 4192570 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG69_20750 APL67721 4192576 4194543 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG69_20755 APL67722 4194635 4194907 + hypothetical_protein RG69_20760 APL67723 4194963 4195226 - membrane_protein RG69_20765 APL67724 4195591 4196061 - arginine_repressor RG69_20770 APL67725 4196496 4197434 + malate_dehydrogenase RG69_20775 APL67726 4197496 4198563 - serine_endoprotease RG69_20780 APL67727 4198653 4200020 - serine_endoprotease_DegQ RG69_20785 APL67728 4200174 4200572 - hypothetical_protein RG69_20790 APL67729 4200766 4201893 + hypothetical_protein RG69_20795 APL67730 4202112 4202540 + 50S_ribosomal_protein_L13 RG69_20800 APL67731 4202556 4202948 + 30S_ribosomal_protein_S9 RG69_20805 APL67732 4203343 4203981 + stringent_starvation_protein_A sspA APL67733 4203987 4204484 + Clp_protease_ClpP RG69_20815 APL67734 4204527 4205894 - C4-dicarboxylate_transporter RG69_20820 APL67735 4206274 4207065 + transcriptional_regulator_NanR RG69_20825 APL67736 4207187 4208080 + N-acetylneuraminate_lyase RG69_20830 APL67737 4208189 4209679 + sialic_acid_transporter RG69_20835 APL67738 4209727 4210416 + N-acetylmannosamine-6-phosphate_2-epimerase RG69_20840 APL67739 4210413 4211288 + N-acetylmannosamine_kinase RG69_20845 APL67740 4211285 4211749 + hypothetical_protein RG69_20850 APL67741 4211809 4212936 - hypothetical_protein RG69_20855 APL67742 4213120 4214538 - glutamate_synthase RG69_20860 APL68951 4214551 4219104 - glutamate_synthase gltB APL68952 4219686 4220615 + hypothetical_protein RG69_20870 APL67743 4220711 4223047 + aerobic_respiration_control_sensor_protein_ArcB RG69_20875 APL67744 4223277 4223930 + isoprenoid_biosynthesis_protein RG69_20880 APL67745 4223927 4224655 + peptidoglycan_transglycosylase mtgA APL67746 4224652 4225284 - hypothetical_protein RG69_20890 APL67747 4225498 4225770 - phosphohistidinoprotein-hexose phosphotransferase RG69_20895 APL67748 4225767 4226621 - glmZ(sRNA)-inactivating_NTPase RG69_20900 APL67749 4226667 4227158 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG69_20905 APL67750 4227276 4227563 - ribosome_hibernation_promoting_factor_HPF RG69_20910 APL67751 4227586 4229019 - RNA_polymerase_factor_sigma-54 RG69_20915 APL67752 4229067 4229792 - sugar_ABC_transporter_ATP-binding_protein RG69_20920 APL67753 4229799 4230356 - lipopolysaccharide_transporter RG69_20925 APL67754 4230325 4230900 - lipopolysaccharide_transporter RG69_20930 APL67755 4230897 4231463 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG69_20935 APL67756 4231484 4232470 - D-arabinose_5-phosphate_isomerase RG69_20940 APL67757 4232484 4233461 - calcium/sodium:proton_antiporter RG69_20945 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APL67741 91 699 107.449856734 0.0 PJR32597.1 APL67738 99 456 100.0 1e-160 PJR32598.1 APL67737 99 990 100.0 0.0 PJR32599.1 APL67736 100 611 100.0 0.0 PJR32600.1 APL67735 100 537 100.0 0.0 >> 160. CP010235_0 Source: Escherichia coli strain S40, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3293 Table of genes, locations, strands and annotations of subject cluster: APL64470 645550 646995 + protease_TldD tldD APL64471 647123 648052 - transcriptional_regulator RG69_03190 APL68809 648235 648438 + transporter RG69_03195 APL64472 648446 649378 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG69_03200 APL64473 649384 651351 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG69_03205 APL64474 651443 651715 + hypothetical_protein RG69_03210 APL64475 651771 652034 - membrane_protein RG69_03215 APL64476 652399 652869 - arginine_repressor RG69_03220 APL64477 653304 654242 + malate_dehydrogenase RG69_03225 APL64478 654304 655371 - serine_endoprotease RG69_03230 APL64479 655461 656828 - serine_endoprotease_DegQ RG69_03235 APL64480 656982 657380 - hypothetical_protein RG69_03240 APL64481 657574 658701 + hypothetical_protein RG69_03245 APL64482 658920 659348 + 50S_ribosomal_protein_L13 RG69_03250 APL64483 659364 659756 + 30S_ribosomal_protein_S9 RG69_03255 APL64484 660151 660789 + stringent_starvation_protein_A sspA APL64485 660795 661292 + Clp_protease_ClpP RG69_03265 APL64486 661335 662702 - C4-dicarboxylate_transporter RG69_03270 APL64487 663082 663873 + transcriptional_regulator_NanR RG69_03275 APL64488 663995 664888 + N-acetylneuraminate_lyase RG69_03280 APL64489 664997 666487 + sialic_acid_transporter RG69_03285 APL64490 666535 667224 + N-acetylmannosamine-6-phosphate_2-epimerase RG69_03290 APL64491 667221 668096 + N-acetylmannosamine_kinase RG69_03295 APL64492 668093 668557 + hypothetical_protein RG69_03300 APL64493 668617 669744 - hypothetical_protein RG69_03305 APL64494 669928 671346 - glutamate_synthase RG69_03310 APL68810 671359 675819 - glutamate_synthase gltB APL68811 676494 677423 + hypothetical_protein RG69_03320 APL64495 677519 679855 + aerobic_respiration_control_sensor_protein_ArcB RG69_03325 APL64496 680085 680738 + isoprenoid_biosynthesis_protein RG69_03330 APL64497 680735 681463 + peptidoglycan_transglycosylase mtgA APL64498 681460 682092 - hypothetical_protein RG69_03340 APL64499 682306 682578 - phosphohistidinoprotein-hexose phosphotransferase RG69_03345 APL64500 682575 683429 - glmZ(sRNA)-inactivating_NTPase RG69_03350 APL64501 683475 683966 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG69_03355 APL64502 684084 684371 - ribosome_hibernation_promoting_factor_HPF RG69_03360 APL64503 684394 685827 - RNA_polymerase_factor_sigma-54 RG69_03365 APL64504 685875 686600 - sugar_ABC_transporter_ATP-binding_protein RG69_03370 APL64505 686607 687164 - lipopolysaccharide_transporter RG69_03375 APL64506 687133 687708 - lipopolysaccharide_transporter RG69_03380 APL64507 687705 688271 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG69_03385 APL64508 688292 689278 - D-arabinose_5-phosphate_isomerase RG69_03390 APL64509 689292 690269 - calcium/sodium:proton_antiporter RG69_03395 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APL64493 91 699 107.449856734 0.0 PJR32597.1 APL64490 99 456 100.0 1e-160 PJR32598.1 APL64489 99 990 100.0 0.0 PJR32599.1 APL64488 100 611 100.0 0.0 PJR32600.1 APL64487 100 537 100.0 0.0 >> 161. LR134220_0 Source: Escherichia coli strain NCTC11121 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3277 Table of genes, locations, strands and annotations of subject cluster: VEC37410 542742 544187 + TldD_protein tldD VEC37411 544321 545250 - LysR_family_transcriptional_regulator aaeR VEC37412 545433 545636 + protein_AaeX aaeX VEC37413 545644 546576 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VEC37414 546582 548549 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VEC37415 548641 548913 + barnase_inhibitor yhcO VEC37416 548969 549232 - protein_YcfR ycfR VEC37417 549597 550067 - arginine_repressor argR VEC37418 550502 551440 + malate_dehydrogenase mdh VEC37419 551503 552570 - protease degS VEC37420 552660 554027 - serine_endoprotease degQ VEC37421 554181 554579 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VEC37422 554773 555900 + putative_ATP/GTP-binding_protein yhcM VEC37423 556119 556547 + 50S_ribosomal_protein_L13 rplM VEC37424 556563 556955 + 30S_ribosomal_protein_S9 rpsI VEC37425 557350 557988 + stringent_starvation_protein_A sspA VEC37426 557994 558491 + stringent_starvation_protein_B sspB VEC37427 558534 559901 - C4-dicarboxylate_transporter dcuD VEC37428 560281 561072 + GntR_family_transcriptional_regulator nanR VEC37429 561194 562087 + N-acetylneuraminate_lyase nanA VEC37430 562196 563686 + sialic_acid_transporter nanT VEC37431 563734 564423 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VEC37432 564420 565295 + putative_transcriptional_regulator nanK VEC37433 565292 565756 + beta-galactosidase yhcH VEC37434 565816 566943 - protein yhcG VEC37435 567128 567844 - putative_transcriptional_regulator yhcF VEC37436 567841 568386 - Uncharacterised_protein NCTC11121_00554 VEC37437 568383 570764 - putative_outer_membrane_protein yhcD VEC37438 570785 571459 - putative_periplasmic_chaperone_protein yhcA VEC37439 571465 571569 - Uncharacterised_protein NCTC11121_00557 VEC37440 571619 571996 - IS1_transposase NCTC11121_00558 VEC37441 572041 572316 - IS1_transposase insA_4 VEC37442 572367 573011 - periplasmic_protein gltF VEC37443 573571 574989 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VEC37444 575002 579555 - glutamate_synthase_subunit_alpha gltB VEC37445 580137 581066 + putative_radical_SAM_protein NCTC11121_00563 VEC37446 581162 583498 + aerobic_respiration_control_protein arcB VEC37447 583728 584381 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VEC37448 584378 585106 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VEC37449 585103 585735 - protein yrbL VEC37450 585949 586221 - phosphocarrier_protein ptsO VEC37451 586218 587072 - putative_ATPase yhbJ Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VEC37434 90 684 107.449856734 0.0 PJR32597.1 VEC37431 99 456 100.0 1e-160 PJR32598.1 VEC37430 99 990 100.0 0.0 PJR32599.1 VEC37429 100 611 100.0 0.0 PJR32600.1 VEC37428 99 536 100.0 0.0 >> 162. LR134152_0 Source: Escherichia coli strain NCTC9104 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3277 Table of genes, locations, strands and annotations of subject cluster: VEA49988 488635 490080 + TldD_protein tldD VEA49989 490214 491143 - LysR_family_transcriptional_regulator aaeR VEA49990 491326 491529 + protein_AaeX aaeX VEA49991 491537 492469 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VEA49992 492475 494442 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VEA49993 494534 494806 + barnase_inhibitor yhcO VEA49994 494862 495125 - protein_YcfR ycfR VEA49995 495490 495960 - arginine_repressor argR VEA49996 496395 497333 + malate_dehydrogenase mdh VEA49997 497396 498463 - protease degS VEA49998 498553 499920 - serine_endoprotease degQ VEA49999 500074 500472 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VEA50000 500666 501793 + putative_ATP/GTP-binding_protein yhcM VEA50001 502012 502440 + 50S_ribosomal_protein_L13 rplM VEA50002 502456 502848 + 30S_ribosomal_protein_S9 rpsI VEA50003 503243 503881 + stringent_starvation_protein_A sspA VEA50004 503887 504384 + stringent_starvation_protein_B sspB VEA50005 504427 505794 - C4-dicarboxylate_transporter dcuD VEA50006 506174 506965 + GntR_family_transcriptional_regulator nanR VEA50007 507087 507980 + N-acetylneuraminate_lyase nanA VEA50008 508089 509579 + sialic_acid_transporter nanT VEA50009 509627 510316 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VEA50010 510313 511188 + putative_transcriptional_regulator nanK VEA50011 511185 511649 + beta-galactosidase yhcH VEA50012 511709 512836 - protein yhcG VEA50013 513021 513737 - putative_transcriptional_regulator yhcF VEA50014 513734 514279 - Uncharacterised_protein NCTC9104_00504 VEA50015 514276 516657 - putative_outer_membrane_protein yhcD VEA50016 516678 517352 - putative_periplasmic_chaperone_protein yhcA VEA50017 517524 518288 - periplasmic_protein gltF VEA50018 518848 520266 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VEA50019 520279 524832 - glutamate_synthase_subunit_alpha gltB VEA50020 525414 526343 + putative_radical_SAM_protein NCTC9104_00510 VEA50021 526439 528775 + aerobic_respiration_control_protein arcB VEA50022 529005 529658 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VEA50023 529655 530383 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VEA50024 530380 531012 - protein yrbL VEA50025 531226 531498 - phosphocarrier_protein ptsO VEA50026 531495 532349 - putative_ATPase yhbJ VEA50027 532395 532886 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VEA50012 90 684 107.449856734 0.0 PJR32597.1 VEA50009 99 456 100.0 1e-160 PJR32598.1 VEA50008 99 990 100.0 0.0 PJR32599.1 VEA50007 100 611 100.0 0.0 PJR32600.1 VEA50006 99 536 100.0 0.0 >> 163. CP025747_0 Source: Escherichia coli strain ML35 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3277 Table of genes, locations, strands and annotations of subject cluster: AUO55695 488206 489651 + metalloprotease_TldD C1I23_02520 AUO55696 489785 490714 - HTH-type_transcriptional_activator_AaeR C1I23_02525 AUO55697 490897 491100 + protein_AaeX C1I23_02530 AUO55698 491108 492040 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C1I23_02535 AUO55699 492046 494013 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C1I23_02540 AUO55700 494105 494377 + hypothetical_protein C1I23_02545 AUO55701 494433 494696 - DUF1471_domain-containing_protein C1I23_02550 AUO55702 495061 495531 - arginine_repressor C1I23_02555 AUO55703 495966 496904 + malate_dehydrogenase C1I23_02560 AUO55704 496967 498034 - outer_membrane-stress_sensor_serine endopeptidase DegS C1I23_02565 AUO55705 498124 499491 - periplasmic_pH-dependent_serine_endoprotease DegQ C1I23_02570 AUO55706 499645 500043 - hypothetical_protein C1I23_02575 AUO55707 500237 501364 + cell_division_protein_ZapE C1I23_02580 AUO55708 501583 502011 + 50S_ribosomal_protein_L13 C1I23_02585 AUO55709 502027 502419 + 30S_ribosomal_protein_S9 C1I23_02590 AUO59838 502663 502872 - hypothetical_protein C1I23_02595 AUO55710 502814 503452 + stringent_starvation_protein_A C1I23_02600 AUO55711 503458 503955 + stringent_starvation_protein_B C1I23_02605 AUO55712 503998 505365 - C4-dicarboxylate_transporter C1I23_02610 C1I23_02615 505365 505475 + transposase no_locus_tag AUO55713 505745 506536 + transcriptional_regulator_NanR nanR AUO55714 506658 507551 + N-acetylneuraminate_lyase nanA AUO55715 507660 509150 + MFS_transporter C1I23_02630 AUO55716 509198 509887 + N-acetylmannosamine-6-phosphate_2-epimerase C1I23_02635 AUO55717 509884 510759 + N-acetylmannosamine_kinase C1I23_02640 AUO55718 510756 511220 + YhcH/YjgK/YiaL_family_protein C1I23_02645 AUO55719 511280 512407 - DUF1016_domain-containing_protein C1I23_02650 C1I23_02655 512592 513125 - hypothetical_protein no_locus_tag AUO55720 513172 514445 + IS3_family_transposase C1I23_02660 C1I23_02665 514456 514644 - hypothetical_protein no_locus_tag AUO55721 514641 515186 - hypothetical_protein C1I23_02670 AUO55722 515183 517564 - fimbrial_protein C1I23_02675 AUO55723 517585 518259 - fimbrial_chaperone_protein C1I23_02680 AUO55724 518431 519195 - glutamate_synthase_operon_protein_GltF C1I23_02685 AUO55725 519316 519600 - hypothetical_protein C1I23_02690 AUO55726 519755 521173 - glutamate_synthase C1I23_02695 AUO55727 521186 525646 - glutamate_synthase_large_subunit C1I23_02700 C1I23_02705 525569 525795 + hypothetical_protein no_locus_tag AUO55728 525693 525929 + hypothetical_protein C1I23_02710 AUO59839 526321 527250 + TIGR01212_family_radical_SAM_protein C1I23_02715 AUO55729 527346 529682 + hybrid_sensor_histidine_kinase/response regulator C1I23_02720 AUO55730 529912 530565 + glutamine_amidotransferase C1I23_02725 AUO55731 530562 531290 + monofunctional_biosynthetic_peptidoglycan transglycosylase C1I23_02730 AUO55732 531287 531919 - protein_YrbL yrbL AUO55733 532133 532405 - phosphocarrier_protein_NPr C1I23_02740 AUO55734 532402 533256 - RNase_adaptor_protein_RapZ C1I23_02745 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AUO55719 90 684 107.449856734 0.0 PJR32597.1 AUO55716 99 456 100.0 1e-160 PJR32598.1 AUO55715 99 990 100.0 0.0 PJR32599.1 AUO55714 100 611 100.0 0.0 PJR32600.1 AUO55713 99 536 100.0 0.0 >> 164. CP023383_0 Source: Escherichia coli strain 1223 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3277 Table of genes, locations, strands and annotations of subject cluster: ATC09340 4138761 4139615 + RNase_adaptor_protein_RapZ CNQ49_21410 ATC09341 4139612 4139884 + phosphocarrier_protein_NPr CNQ49_21415 ATC09342 4140098 4140730 + hypothetical_protein CNQ49_21420 ATC09343 4140727 4141455 - monofunctional_biosynthetic_peptidoglycan transglycosylase CNQ49_21425 ATC09344 4141452 4142105 - glutamine_amidotransferase CNQ49_21430 ATC09345 4142335 4144671 - hybrid_sensor_histidine_kinase/response regulator CNQ49_21435 ATC10053 4144767 4145696 - TIGR01212_family_radical_SAM_protein CNQ49_21440 ATC09346 4146088 4146324 - hypothetical_protein CNQ49_21445 CNQ49_21450 4146222 4146448 - hypothetical_protein no_locus_tag ATC09347 4146371 4150831 + glutamate_synthase_large_subunit CNQ49_21455 ATC09348 4150844 4152262 + glutamate_synthase CNQ49_21460 ATC09349 4152417 4152701 + hypothetical_protein CNQ49_21465 ATC09350 4152822 4153586 + glutamate_synthase_operon_protein_GltF CNQ49_21470 ATC09351 4153758 4154432 + fimbrial_chaperone_protein CNQ49_21475 ATC09352 4154453 4156834 + fimbrial_protein CNQ49_21480 ATC09353 4156831 4157376 + hypothetical_protein CNQ49_21485 ATC09354 4157373 4158089 + hypothetical_protein CNQ49_21490 ATC09355 4158274 4159401 + DUF1016_domain-containing_protein CNQ49_21495 ATC09356 4159461 4159925 - YhcH/YjgK/YiaL_family_protein CNQ49_21500 ATC09357 4159922 4160797 - N-acetylmannosamine_kinase CNQ49_21505 ATC09358 4160794 4161483 - N-acetylmannosamine-6-phosphate_2-epimerase CNQ49_21510 ATC09359 4161531 4163021 - MFS_transporter CNQ49_21515 ATC09360 4163130 4164023 - N-acetylneuraminate_lyase nanA ATC09361 4164145 4164936 - transcriptional_regulator_NanR CNQ49_21525 CNQ49_21530 4165206 4165316 - transposase no_locus_tag ATC09362 4165316 4166683 + C4-dicarboxylate_transporter CNQ49_21535 ATC09363 4166726 4167223 - stringent_starvation_protein_B CNQ49_21540 ATC09364 4167229 4167867 - stringent_starvation_protein_A CNQ49_21545 ATC09365 4167809 4168018 + hypothetical_protein CNQ49_21550 ATC09366 4168262 4168654 - 30S_ribosomal_protein_S9 CNQ49_21555 ATC09367 4168670 4169098 - 50S_ribosomal_protein_L13 CNQ49_21560 ATC09368 4169317 4170444 - cell_division_protein_ZapE CNQ49_21565 ATC09369 4170638 4171036 + hypothetical_protein CNQ49_21570 ATC09370 4171190 4172557 + periplasmic_pH-dependent_serine_endoprotease DegQ CNQ49_21575 ATC09371 4172647 4173714 + outer_membrane-stress_sensor_serine endopeptidase DegS CNQ49_21580 ATC09372 4173777 4174715 - malate_dehydrogenase CNQ49_21585 ATC09373 4175150 4175620 + arginine_repressor CNQ49_21590 ATC09374 4175985 4176248 + hypothetical_protein CNQ49_21595 ATC09375 4176304 4176576 - hypothetical_protein CNQ49_21600 ATC09376 4176668 4178635 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CNQ49_21605 ATC09377 4178641 4179573 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CNQ49_21610 ATC09378 4179581 4179784 - protein_AaeX CNQ49_21615 ATC09379 4179967 4180896 + HTH-type_transcriptional_activator_AaeR CNQ49_21620 ATC09380 4181030 4182475 - metalloprotease_TldD CNQ49_21625 ATC09381 4182905 4186705 - TIGR02099_family_protein CNQ49_21630 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ATC09355 90 684 107.449856734 0.0 PJR32597.1 ATC09358 99 456 100.0 1e-160 PJR32598.1 ATC09359 99 990 100.0 0.0 PJR32599.1 ATC09360 100 611 100.0 0.0 PJR32600.1 ATC09361 99 536 100.0 0.0 >> 165. CP011134_0 Source: Escherichia coli VR50, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3277 Table of genes, locations, strands and annotations of subject cluster: AKA92391 3663473 3664126 - enhancing_lycopene_biosynthesis_protein_2 elbB AKA92392 3664356 3666692 - aerobic_respiration_control_sensor_protein_ArcB arcB AKA92393 3666788 3667717 - uncharacterized_protein_YhcC yhcC AKA92394 3668299 3672852 + glutamate_synthase_[NADPH]_large_chain gltB AKA92395 3672865 3674283 + glutamate_synthase_[NADPH]_small_chain gltD AKA92396 3674912 3675607 + protein_GltF gltF AKA92397 3675779 3676453 + putative_fimbrial_chaperone_YhcA yhcA AKA92398 3677747 3678073 + IS629_transposase_A ECVR50_3621 AKA92399 3678070 3678960 + IS629_transposase_B ECVR50_3622 AKA92400 3679196 3679606 + IS2_transposase_A ECVR50_3623 AKA92401 3679564 3680469 + IS2_transposase_B ECVR50_3624 AKA92402 3681500 3682045 + hypothetical_protein ECVR50_3625 AKA92403 3682042 3682758 + uncharacterized_protein_YhcF yhcF AKA92404 3682943 3684070 + uncharacterized_protein_YhcG yhcG AKA92405 3684130 3684594 - uncharacterized_protein_YhcH yhcH AKA92406 3684591 3685466 - N-acetylmannosamine_kinase nanK AKA92407 3685463 3686152 - putative_N-acetylmannosamine-6-phosphate 2-epimerase nanE AKA92408 3686200 3687690 - putative_sialic_acid_transporter nanT AKA92409 3687799 3688692 - N-acetylneuraminate_lyase nanA AKA92410 3688814 3689605 - transcriptional_regulator_NanR nanR AKA92411 3689985 3691352 + putative_cryptic_C4-dicarboxylate_transporter DcuD dcuD AKA92412 3691395 3691892 - stringent_starvation_protein_B sspB AKA92413 3691898 3692536 - stringent_starvation_protein_A sspA AKA92414 3692931 3693323 - 30S_ribosomal_protein_S9 rpsI AKA92415 3693339 3693767 - 50S_ribosomal_protein_L13 rplM AKA92416 3693986 3695113 - cell_division_protein_ZapE zapE AKA92417 3695307 3695705 + inner_membrane_protein_YhcB yhcB AKA92418 3695859 3697226 + periplasmic_pH-dependent_serine_endoprotease DegQ degQ AKA92419 3697316 3698383 + serine_endoprotease_DegS degS AKA92420 3698487 3699833 + IS4_transposase ECVR50_3643 AKA92421 3699884 3700822 - malate_dehydrogenase mdh AKA92422 3701257 3701727 + arginine_repressor argR AKA92423 3702092 3702355 + uncharacterized_protein_YhcN yhcN AKA92424 3702411 3702683 - uncharacterized_protein_YhcO yhcO AKA92425 3702775 3704742 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AKA92426 3704748 3705680 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AKA92427 3705688 3705891 - protein_AaeX aaeX AKA92428 3706074 3707003 + HTH-type_transcriptional_activator_AaeR aaeR AKA92429 3707137 3708582 - metalloprotease_TldD tldD AKA92430 3709012 3712812 - uncharacterized_protein_YhdP yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKA92404 90 684 107.449856734 0.0 PJR32597.1 AKA92407 99 456 100.0 1e-160 PJR32598.1 AKA92408 99 990 100.0 0.0 PJR32599.1 AKA92409 100 611 100.0 0.0 PJR32600.1 AKA92410 99 536 100.0 0.0 >> 166. CP010371_0 Source: Escherichia coli strain 6409, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3277 Table of genes, locations, strands and annotations of subject cluster: AJB53238 3393939 3394793 + glmZ(sRNA)-inactivating_NTPase RR31_16810 AJB53239 3394790 3395062 + phosphohistidinoprotein-hexose phosphotransferase RR31_16815 AJB53240 3395276 3395908 + hypothetical_protein RR31_16820 AJB53241 3395905 3396633 - peptidoglycan_transglycosylase mtgA AJB53242 3396630 3397283 - isoprenoid_biosynthesis_protein RR31_16830 AJB53243 3397513 3399849 - aerobic_respiration_control_sensor_protein_ArcB RR31_16835 AJB54608 3399945 3400874 - hypothetical_protein RR31_16840 AJB54609 3401549 3406009 + glutamate_synthase gltB AJB53244 3406022 3407440 + glutamate_synthase RR31_16850 AJB53245 3408000 3408764 + gltF RR31_16855 AJB53246 3408936 3409610 + fimbrial_chaperone_protein RR31_16860 AJB53247 3409631 3412012 + fimbrial_protein RR31_16865 AJB53248 3412009 3412554 + hypothetical_protein RR31_16870 AJB53249 3412551 3413267 + hypothetical_protein RR31_16875 AJB53250 3413452 3414579 + hypothetical_protein RR31_16880 AJB53251 3414639 3415103 - hypothetical_protein RR31_16885 AJB53252 3415100 3415975 - N-acetylmannosamine_kinase RR31_16890 AJB53253 3415972 3416661 - N-acetylmannosamine-6-phosphate_2-epimerase RR31_16895 AJB53254 3416709 3418199 - sialic_acid_transporter RR31_16900 AJB53255 3418308 3419201 - N-acetylneuraminate_lyase RR31_16905 AJB53256 3419323 3420114 - transcriptional_regulator_NanR RR31_16910 AJB53257 3420494 3421861 + C4-dicarboxylate_transporter RR31_16915 AJB53258 3421904 3422401 - Clp_protease_ClpP RR31_16920 AJB53259 3422407 3423045 - stringent_starvation_protein_A sspA AJB53260 3423440 3423832 - 30S_ribosomal_protein_S9 RR31_16930 AJB53261 3423848 3424276 - 50S_ribosomal_protein_L13 RR31_16935 AJB53262 3424495 3425622 - hypothetical_protein RR31_16940 AJB53263 3425816 3426214 + hypothetical_protein RR31_16945 AJB53264 3426368 3427735 + serine_endoprotease_DegQ RR31_16950 AJB53265 3427825 3428892 + serine_endoprotease RR31_16955 AJB53266 3428955 3429893 - malate_dehydrogenase RR31_16960 AJB53267 3430328 3430798 + arginine_repressor RR31_16965 AJB53268 3431163 3431426 + membrane_protein RR31_16970 AJB53269 3431482 3431754 - hypothetical_protein RR31_16975 AJB53270 3431846 3433813 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RR31_16980 AJB53271 3433819 3434751 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RR31_16985 AJB54610 3434759 3434962 - transporter RR31_16990 AJB53272 3435145 3436074 + transcriptional_regulator RR31_16995 AJB53273 3436208 3437653 - protease_TldD tldD AJB53274 3438083 3441883 - hypothetical_protein RR31_17005 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AJB53250 90 684 107.449856734 0.0 PJR32597.1 AJB53253 99 456 100.0 1e-160 PJR32598.1 AJB53254 99 990 100.0 0.0 PJR32599.1 AJB53255 100 611 100.0 0.0 PJR32600.1 AJB53256 99 536 100.0 0.0 >> 167. CP010237_0 Source: Escherichia coli strain S43, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3277 Table of genes, locations, strands and annotations of subject cluster: APL75675 2397628 2399073 + protease_TldD tldD APL75676 2399207 2400136 - transcriptional_regulator RG71_11695 APL78137 2400319 2400522 + transporter RG71_11700 APL75677 2400530 2401462 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG71_11705 APL75678 2401468 2403435 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG71_11710 APL75679 2403527 2403799 + hypothetical_protein RG71_11715 APL75680 2403855 2404118 - membrane_protein RG71_11720 APL75681 2404483 2404953 - arginine_repressor RG71_11725 APL75682 2405388 2406326 + malate_dehydrogenase RG71_11730 APL75683 2406389 2407456 - serine_endoprotease RG71_11735 APL75684 2407546 2408913 - serine_endoprotease_DegQ RG71_11740 APL75685 2409067 2409465 - hypothetical_protein RG71_11745 APL75686 2409659 2410786 + hypothetical_protein RG71_11750 APL75687 2411005 2411433 + 50S_ribosomal_protein_L13 RG71_11755 APL75688 2411449 2411841 + 30S_ribosomal_protein_S9 RG71_11760 APL75689 2412236 2412874 + stringent_starvation_protein_A sspA APL75690 2412880 2413377 + Clp_protease_ClpP RG71_11770 APL75691 2413420 2414787 - C4-dicarboxylate_transporter RG71_11775 APL75692 2415167 2415958 + transcriptional_regulator_NanR RG71_11780 APL75693 2416080 2416973 + N-acetylneuraminate_lyase RG71_11785 APL75694 2417082 2418572 + sialic_acid_transporter RG71_11790 APL75695 2418620 2419309 + N-acetylmannosamine-6-phosphate_2-epimerase RG71_11795 APL75696 2419306 2420181 + N-acetylmannosamine_kinase RG71_11800 APL75697 2420178 2420642 + hypothetical_protein RG71_11805 APL75698 2420702 2421829 - hypothetical_protein RG71_11810 APL75699 2422014 2422730 - hypothetical_protein RG71_11815 APL75700 2422727 2423272 - hypothetical_protein RG71_11820 APL75701 2423269 2425650 - fimbrial_protein RG71_11825 APL75702 2425671 2426345 - fimbrial_chaperone_protein RG71_11830 APL75703 2426517 2427281 - gltF RG71_11835 APL75704 2427841 2429259 - glutamate_synthase RG71_11840 APL78138 2429272 2433732 - glutamate_synthase gltB APL78139 2434407 2435336 + hypothetical_protein RG71_11850 APL75705 2435432 2437768 + aerobic_respiration_control_sensor_protein_ArcB RG71_11855 APL75706 2437998 2438651 + isoprenoid_biosynthesis_protein RG71_11860 APL75707 2438648 2439376 + peptidoglycan_transglycosylase mtgA APL75708 2439373 2440005 - hypothetical_protein RG71_11870 APL75709 2440219 2440491 - phosphohistidinoprotein-hexose phosphotransferase RG71_11875 APL75710 2440488 2441342 - glmZ(sRNA)-inactivating_NTPase RG71_11880 APL75711 2441388 2441879 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG71_11885 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APL75698 90 684 107.449856734 0.0 PJR32597.1 APL75695 99 456 100.0 1e-160 PJR32598.1 APL75694 99 990 100.0 0.0 PJR32599.1 APL75693 100 611 100.0 0.0 PJR32600.1 APL75692 99 536 100.0 0.0 >> 168. CP010171_0 Source: Escherichia coli strain H7, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3277 Table of genes, locations, strands and annotations of subject cluster: APK72204 3412716 3414161 + protease_TldD tldD APK72205 3414295 3415224 - transcriptional_regulator RG49_17065 APK73555 3415407 3415610 + transporter RG49_17070 APK72206 3415618 3416550 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG49_17075 APK72207 3416556 3418523 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG49_17080 APK72208 3418615 3418887 + hypothetical_protein RG49_17085 APK72209 3418943 3419206 - membrane_protein RG49_17090 APK72210 3419571 3420041 - arginine_repressor RG49_17095 APK72211 3420476 3421414 + malate_dehydrogenase RG49_17100 APK72212 3421477 3422544 - serine_endoprotease RG49_17105 APK72213 3422634 3424001 - serine_endoprotease_DegQ RG49_17110 APK72214 3424155 3424553 - hypothetical_protein RG49_17115 APK72215 3424747 3425874 + hypothetical_protein RG49_17120 APK72216 3426093 3426521 + 50S_ribosomal_protein_L13 RG49_17125 APK72217 3426537 3426929 + 30S_ribosomal_protein_S9 RG49_17130 APK72218 3427324 3427962 + stringent_starvation_protein_A sspA APK72219 3427968 3428465 + Clp_protease_ClpP RG49_17140 APK72220 3428508 3429875 - C4-dicarboxylate_transporter RG49_17145 APK72221 3430255 3431046 + transcriptional_regulator_NanR RG49_17150 APK72222 3431168 3432061 + N-acetylneuraminate_lyase RG49_17155 APK72223 3432170 3433660 + sialic_acid_transporter RG49_17160 APK72224 3433708 3434397 + N-acetylmannosamine-6-phosphate_2-epimerase RG49_17165 APK72225 3434394 3435269 + N-acetylmannosamine_kinase RG49_17170 APK72226 3435266 3435730 + hypothetical_protein RG49_17175 APK72227 3435790 3436917 - hypothetical_protein RG49_17180 APK72228 3437102 3437818 - hypothetical_protein RG49_17185 APK72229 3437815 3438360 - hypothetical_protein RG49_17190 APK72230 3438357 3440738 - fimbrial_protein RG49_17195 APK72231 3440759 3441433 - fimbrial_chaperone_protein RG49_17200 APK72232 3441605 3442369 - gltF RG49_17205 APK72233 3442929 3444347 - glutamate_synthase RG49_17210 APK73556 3444360 3448820 - glutamate_synthase gltB APK73557 3449495 3450424 + hypothetical_protein RG49_17220 APK72234 3450520 3452856 + aerobic_respiration_control_sensor_protein_ArcB RG49_17225 APK72235 3453086 3453739 + isoprenoid_biosynthesis_protein RG49_17230 APK72236 3453736 3454464 + peptidoglycan_transglycosylase mtgA APK72237 3454461 3455093 - hypothetical_protein RG49_17240 APK72238 3455306 3455578 - phosphohistidinoprotein-hexose phosphotransferase RG49_17245 APK72239 3455575 3456429 - glmZ(sRNA)-inactivating_NTPase RG49_17250 APK72240 3456475 3456966 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG49_17255 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APK72227 90 684 107.449856734 0.0 PJR32597.1 APK72224 99 456 100.0 1e-160 PJR32598.1 APK72223 99 990 100.0 0.0 PJR32599.1 APK72222 100 611 100.0 0.0 PJR32600.1 APK72221 99 536 100.0 0.0 >> 169. CP010152_0 Source: Escherichia coli strain D9, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3277 Table of genes, locations, strands and annotations of subject cluster: APK40726 3944288 3945142 + glmZ(sRNA)-inactivating_NTPase RG42_19465 APK40727 3945139 3945411 + phosphohistidinoprotein-hexose phosphotransferase RG42_19470 APK40728 3945625 3946257 + hypothetical_protein RG42_19475 APK40729 3946254 3946982 - peptidoglycan_transglycosylase mtgA APK40730 3946979 3947632 - isoprenoid_biosynthesis_protein RG42_19485 APK40731 3947862 3950198 - aerobic_respiration_control_sensor_protein_ArcB RG42_19490 APK41513 3950294 3951223 - hypothetical_protein RG42_19495 APK41514 3951898 3956358 + glutamate_synthase gltB APK40732 3956371 3957789 + glutamate_synthase RG42_19505 APK40733 3958349 3959113 + gltF RG42_19510 APK40734 3959285 3959959 + fimbrial_chaperone_protein RG42_19515 APK40735 3959980 3962361 + fimbrial_protein RG42_19520 APK40736 3962358 3962903 + hypothetical_protein RG42_19525 APK40737 3962900 3963616 + hypothetical_protein RG42_19530 APK40738 3963801 3964928 + hypothetical_protein RG42_19535 APK40739 3964988 3965452 - hypothetical_protein RG42_19540 APK40740 3965449 3966324 - N-acetylmannosamine_kinase RG42_19545 APK40741 3966321 3967010 - N-acetylmannosamine-6-phosphate_2-epimerase RG42_19550 APK40742 3967058 3968548 - sialic_acid_transporter RG42_19555 APK40743 3968657 3969550 - N-acetylneuraminate_lyase RG42_19560 APK40744 3969672 3970463 - transcriptional_regulator_NanR RG42_19565 APK40745 3970843 3972210 + C4-dicarboxylate_transporter RG42_19570 APK40746 3972253 3972750 - Clp_protease_ClpP RG42_19575 APK40747 3972756 3973394 - stringent_starvation_protein_A sspA APK40748 3973789 3974181 - 30S_ribosomal_protein_S9 RG42_19585 APK40749 3974197 3974625 - 50S_ribosomal_protein_L13 RG42_19590 APK40750 3974844 3975971 - hypothetical_protein RG42_19595 APK40751 3976165 3976563 + hypothetical_protein RG42_19600 APK40752 3976717 3978084 + serine_endoprotease_DegQ RG42_19605 APK40753 3978174 3979241 + serine_endoprotease RG42_19610 APK40754 3979304 3980242 - malate_dehydrogenase RG42_19615 APK40755 3980677 3981147 + arginine_repressor RG42_19620 APK40756 3981512 3981775 + membrane_protein RG42_19625 APK40757 3981831 3982103 - hypothetical_protein RG42_19630 APK40758 3982195 3984162 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG42_19635 APK40759 3984168 3985100 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG42_19640 APK41515 3985108 3985311 - transporter RG42_19645 APK40760 3985494 3986423 + transcriptional_regulator RG42_19650 APK40761 3986557 3988002 - protease_TldD tldD APK40762 3988432 3992232 - hypothetical_protein RG42_19660 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APK40738 90 684 107.449856734 0.0 PJR32597.1 APK40741 99 456 100.0 1e-160 PJR32598.1 APK40742 99 990 100.0 0.0 PJR32599.1 APK40743 100 611 100.0 0.0 PJR32600.1 APK40744 99 536 100.0 0.0 >> 170. CP010143_0 Source: Escherichia coli strain D4, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3277 Table of genes, locations, strands and annotations of subject cluster: APK17154 3776891 3777745 + glmZ(sRNA)-inactivating_NTPase RG37_18645 APK17155 3777742 3778014 + phosphohistidinoprotein-hexose phosphotransferase RG37_18650 APK17156 3778228 3778860 + hypothetical_protein RG37_18655 APK17157 3778857 3779585 - peptidoglycan_transglycosylase mtgA APK17158 3779582 3780235 - isoprenoid_biosynthesis_protein RG37_18665 APK17159 3780465 3782801 - aerobic_respiration_control_sensor_protein_ArcB RG37_18670 APK18243 3782897 3783826 - hypothetical_protein RG37_18675 APK18244 3784501 3788961 + glutamate_synthase gltB APK17160 3788974 3790392 + glutamate_synthase RG37_18685 APK17161 3790952 3791716 + gltF RG37_18690 APK17162 3791888 3792562 + fimbrial_chaperone_protein RG37_18695 APK17163 3792583 3794964 + fimbrial_protein RG37_18700 APK17164 3794961 3795506 + hypothetical_protein RG37_18705 APK17165 3795503 3796219 + hypothetical_protein RG37_18710 APK17166 3796404 3797531 + hypothetical_protein RG37_18715 APK17167 3797591 3798055 - hypothetical_protein RG37_18720 APK17168 3798052 3798927 - N-acetylmannosamine_kinase RG37_18725 APK17169 3798924 3799613 - N-acetylmannosamine-6-phosphate_2-epimerase RG37_18730 APK17170 3799661 3801151 - sialic_acid_transporter RG37_18735 APK17171 3801260 3802153 - N-acetylneuraminate_lyase RG37_18740 APK17172 3802275 3803066 - transcriptional_regulator_NanR RG37_18745 APK17173 3803446 3804813 + C4-dicarboxylate_transporter RG37_18750 APK17174 3804856 3805353 - Clp_protease_ClpP RG37_18755 APK17175 3805359 3805997 - stringent_starvation_protein_A sspA APK17176 3806392 3806784 - 30S_ribosomal_protein_S9 RG37_18765 APK17177 3806800 3807228 - 50S_ribosomal_protein_L13 RG37_18770 APK17178 3807447 3808574 - hypothetical_protein RG37_18775 APK17179 3808768 3809166 + hypothetical_protein RG37_18780 APK17180 3809320 3810687 + serine_endoprotease_DegQ RG37_18785 APK17181 3810777 3811844 + serine_endoprotease RG37_18790 APK17182 3811907 3812845 - malate_dehydrogenase RG37_18795 APK17183 3813280 3813750 + arginine_repressor RG37_18800 APK17184 3814115 3814378 + membrane_protein RG37_18805 APK17185 3814434 3814706 - hypothetical_protein RG37_18810 APK17186 3814798 3816765 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG37_18815 APK17187 3816771 3817703 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG37_18820 APK18245 3817711 3817914 - transporter RG37_18825 APK17188 3818097 3819026 + transcriptional_regulator RG37_18830 APK17189 3819160 3820605 - protease_TldD tldD APK17190 3821035 3824835 - hypothetical_protein RG37_18840 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APK17166 90 684 107.449856734 0.0 PJR32597.1 APK17169 99 456 100.0 1e-160 PJR32598.1 APK17170 99 990 100.0 0.0 PJR32599.1 APK17171 100 611 100.0 0.0 PJR32600.1 APK17172 99 536 100.0 0.0 >> 171. AP021890_0 Source: Escherichia coli 2017.15.01CC DNA, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3265 Table of genes, locations, strands and annotations of subject cluster: BBP14492 4108785 4109771 + arabinose_5-phosphate_isomerase_KdsD kdsD BBP14493 4109792 4110358 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC BBP14494 4110355 4110930 + lipopolysaccharide_export_system_protein_LptC lptC BBP14495 4110899 4111456 + lipopolysaccharide_export_system_protein_LptA lptA BBP14496 4111463 4112188 + lipopolysaccharide_export_system_ATP-binding protein LptB lptB BBP14497 4112236 4113669 + RNA_polymerase_sigma-54_factor rpoN BBP14498 4113692 4113979 + ribosome_hibernation_promoting_factor hpf BBP14499 4114097 4114588 + nitrogen_regulatory_protein ptsN BBP14500 4114634 4115488 + RNase_adapter_protein_RapZ rapZ BBP14501 4115485 4115757 + phosphocarrier_protein_NPr npr BBP14502 4115971 4116603 + hypothetical_protein yrbL BBP14503 4116600 4117328 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA BBP14504 4117325 4117978 - glyoxalase VEGS12_38200 BBP14505 4118208 4120544 - aerobic_respiration_control_sensor_protein_ArcB arcB_2 BBP14506 4120640 4121602 - TIGR01212_family_radical_SAM_protein VEGS12_38220 BBP14507 4122136 4126704 + glutamate_synthase gltB BBP14508 4126717 4128135 + glutamate_synthase_[NADPH]_small_chain gltD BBP14509 4128319 4129446 + hypothetical_protein yhcG BBP14510 4129506 4129970 - hypothetical_protein yhcH BBP14511 4129967 4130842 - N-acetylmannosamine_kinase nanK BBP14512 4130839 4131528 - putative_N-acetylmannosamine-6-phosphate 2-epimerase nanE BBP14513 4131576 4133066 - putative_sialic_acid_transporter nanT BBP14514 4133175 4134068 - N-acetylneuraminate_lyase nanA BBP14515 4134190 4134972 - transcriptional_regulator_NanR nanR BBP14516 4135361 4136728 + C4-dicarboxylate_ABC_transporter VEGS12_38320 BBP14517 4136771 4137268 - stringent_starvation_protein_B sspB BBP14518 4137274 4137912 - stringent_starvation_protein_A sspA BBP14519 4138307 4138699 - 30S_ribosomal_protein_S9 rpsI BBP14520 4138715 4139143 - 50S_ribosomal_protein_L13 rplM BBP14521 4139362 4140333 - cell_division_protein_ZapE zapE BBP14522 4140677 4141081 + hypothetical_protein yhcB BBP14523 4141235 4142602 + periplasmic_pH-dependent_serine_endoprotease DegQ degQ BBP14524 4142692 4143759 + serine_endoprotease_DegS degS BBP14525 4143822 4144760 - malate_dehydrogenase mdh BBP14526 4145195 4145665 + arginine_repressor argR BBP14527 4146030 4146293 + hypothetical_protein VEGS12_38430 BBP14528 4146349 4146621 - hypothetical_protein yhcO BBP14529 4146713 4148680 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB BBP14530 4148686 4149618 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA BBP14531 4149626 4149829 - protein_AaeX aaeX BBP14532 4150012 4150941 + HTH-type_transcriptional_activator_AaeR aaeR BBP14533 4151069 4152514 - metalloprotease_TldD tldD BBP14534 4152670 4156470 - DUF3971_domain-containing_protein VEGS12_38500 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 BBP14509 91 699 107.449856734 0.0 PJR32596.1 BBP14511 97 509 100.0 2e-179 PJR32597.1 BBP14512 99 456 100.0 1e-160 PJR32598.1 BBP14513 99 990 100.0 0.0 PJR32599.1 BBP14514 100 611 100.0 0.0 >> 172. CP048330_0 Source: Escherichia coli strain 10 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3248 Table of genes, locations, strands and annotations of subject cluster: QHW62056 489431 490876 + metalloprotease_TldD tldD QHW62057 491010 491939 - HTH-type_transcriptional_activator_AaeR aaeR QHW62058 492122 492325 + AaeX_family_protein GZS13_02320 QHW62059 492333 493265 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHW62060 493271 495238 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHW62061 495330 495602 + hypothetical_protein GZS13_02335 QHW62062 495658 495921 - peroxide/acid_stress_response_protein_YhcN yhcN QHW62063 496286 496756 - transcriptional_regulator_ArgR argR QHW62064 497191 498129 + malate_dehydrogenase mdh QHW62065 498192 499259 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QHW62066 499349 500716 - serine_endoprotease_DegQ degQ QHW62067 500870 501268 - DUF1043_family_protein GZS13_02365 QHW62068 501462 502589 + cell_division_protein_ZapE GZS13_02370 QHW62069 502808 503236 + 50S_ribosomal_protein_L13 rplM QHW62070 503252 503644 + 30S_ribosomal_protein_S9 rpsI QHW62071 504039 504677 + stringent_starvation_protein_A sspA QHW62072 504683 505180 + ClpXP_protease_specificity-enhancing_factor sspB QHW62073 505223 506590 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHW62074 506970 507761 + transcriptional_regulator_NanR nanR QHW62075 507883 508776 + N-acetylneuraminate_lyase nanA QHW62076 508885 510375 + sialic_acid_transporter_NanT nanT QHW62077 510423 511112 + N-acetylmannosamine-6-phosphate_2-epimerase GZS13_02415 QHW62078 511109 511984 + N-acetylmannosamine_kinase GZS13_02420 QHW62079 511981 512445 + DUF386_domain-containing_protein GZS13_02425 QHW62080 512505 513632 - DUF1016_domain-containing_protein GZS13_02430 QHW62081 513817 514533 - DUF1120_domain-containing_protein GZS13_02435 QHW62082 514530 515075 - hypothetical_protein GZS13_02440 QHW62083 515072 517453 - fimbrial_biogenesis_outer_membrane_usher protein GZS13_02445 QHW62084 517474 518148 - fimbria/pilus_periplasmic_chaperone GZS13_02450 QHW62085 518320 519084 - DUF1120_domain-containing_protein GZS13_02455 QHW62086 519644 521062 - glutamate_synthase GZS13_02460 QHW65860 521075 525535 - glutamate_synthase_large_subunit gltB QHW62087 526210 527139 + TIGR01212_family_radical_SAM_protein GZS13_02470 QHW62088 527235 529571 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHW62089 529801 530454 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHW62090 530451 531179 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHW62091 531176 531808 - PhoP_regulatory_network_protein_YrbL yrbL QHW62092 532022 532294 - PTS_phosphocarrier_protein_NPr npr QHW62093 532291 533145 - RNase_adapter_RapZ rapZ QHW62094 533191 533682 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHW62080 90 684 107.449856734 0.0 PJR32596.1 QHW62078 97 507 100.0 1e-178 PJR32597.1 QHW62077 99 456 100.0 1e-160 PJR32598.1 QHW62076 99 990 100.0 0.0 PJR32599.1 QHW62075 100 611 100.0 0.0 >> 173. CP029057_0 Source: Escherichia coli strain FORC_081 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 3248 Table of genes, locations, strands and annotations of subject cluster: QBP88695 3978905 3980350 + TldD_protein,_part_of_TldE/TldD_proteolytic complex FORC81_3932 QBP88696 3980484 3981395 - LysR_family_transcriptional_regulator_QseA FORC81_3933 QBP88697 3981527 3981799 + membrane_protein FORC81_3934 QBP88698 3981807 3982739 + Membrane_fusion_component_of_tripartite multidrug resistance FORC81_3935 QBP88699 3982745 3984712 + FUSARIC_ACID_RESISTANCE_PROTEIN_FUSB FORC81_3936 QBP88700 3984804 3985076 + ribonuclease_inhibitor FORC81_3937 QBP88701 3985132 3985395 - exported_protein FORC81_3938 QBP88702 3985760 3986230 - Arginine_pathway_regulatory_protein_ArgR FORC81_3939 QBP88703 3986665 3987603 + Malate_dehydrogenase FORC81_3940 QBP88704 3987666 3988733 - Outer_membrane_stress_sensor_protease_DegS FORC81_3941 QBP88705 3988823 3990190 - Outer_membrane_stress_sensor_protease_DegQ, serine protease FORC81_3942 QBP88706 3990344 3990742 - cytochrome_d_ubiquinol_oxidase_subunit_III FORC81_3943 QBP88707 3990936 3992063 + ATPase,_AFG1_family FORC81_3944 QBP88708 3992282 3992710 + LSU_ribosomal_protein_L13p_(L13Ae) FORC81_3945 QBP88709 3992726 3993118 + SSU_ribosomal_protein_S9p_(S16e) FORC81_3946 QBP88710 3993513 3994151 + Stringent_starvation_protein_A FORC81_3947 QBP88711 3994157 3994654 + ClpXP_protease_specificity-enhancing_factor FORC81_3948 QBP88712 3994697 3996064 - cryptic_C4-dicarboxylate_transporter_DcuD FORC81_3949 QBP88713 3996453 3997235 + Transcriptional_regulator_NanR FORC81_3950 QBP88714 3997357 3998250 + N-acetylneuraminate_lyase FORC81_3951 QBP88715 3998359 3999849 + Sialic_acid_transporter_(permease)_NanT FORC81_3952 QBP88716 3999897 4000586 + N-acetylmannosamine-6-phosphate_2-epimerase FORC81_3953 QBP88717 4000583 4001458 + N-acetylmannosamine_kinase FORC81_3954 QBP88718 4001455 4001919 + sugar_isomerase FORC81_3955 QBP88719 4001979 4003106 - protein_YhcG FORC81_3956 QBP88720 4003291 4004007 - Beta-fimbriae_major_subunit FORC81_3957 QBP88721 4004004 4004549 - PTS_system,_mannitol-specific_IIABC_component (EIIABC-Mtl) FORC81_3958 QBP88722 4004546 4006927 - Beta-fimbriae_usher_protein FORC81_3959 QBP88723 4006948 4007622 - Beta-fimbriae_chaperone_protein FORC81_3960 QBP88724 4007794 4008558 - Beta-fimbriae_major_subunit FORC81_3961 QBP88725 4009118 4010536 - Glutamate_synthase_NADPH_small_chain FORC81_3962 QBP88726 4010549 4015102 - Glutamate_synthase_NADPH_large_chain FORC81_3963 QBP88727 4015534 4015638 + hypothetical_protein FORC81_3964 QBP88728 4015684 4016613 + Fe-S_oxidoreductase FORC81_3965 QBP88729 4016709 4019045 + Aerobic_respiration_control_sensor_protein_arcB FORC81_3966 QBP88730 4019275 4019928 + Sigma_cross-reacting_protein_27A FORC81_3967 QBP88731 4019925 4020653 + Monofunctional_biosynthetic_peptidoglycan transglycosylase FORC81_3968 QBP88732 4020650 4021282 - protein_YrbL FORC81_3969 QBP88733 4021496 4021768 - PTS_HPr_component_phosphorylation_site FORC81_3970 QBP88734 4021765 4022619 - ATP-binding_protein FORC81_3971 QBP88735 4022665 4023156 - PTS_system_nitrogen-specific_IIA_component, PtsN FORC81_3972 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QBP88719 90 684 107.449856734 0.0 PJR32596.1 QBP88717 97 507 100.0 1e-178 PJR32597.1 QBP88716 99 456 100.0 1e-160 PJR32598.1 QBP88715 99 990 100.0 0.0 PJR32599.1 QBP88714 100 611 100.0 0.0 >> 174. LR134248_0 Source: Escherichia coli strain NCTC10537 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2960 Table of genes, locations, strands and annotations of subject cluster: VED39067 524172 525617 + TldD_protein tldD VED39068 525745 526674 - LysR_family_transcriptional_regulator aaeR VED39069 526857 527060 + protein_AaeX aaeX VED39070 527068 528000 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VED39071 528006 529973 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VED39072 530065 530337 + barnase_inhibitor yhcO VED39073 530393 530656 - protein_YcfR ycfR VED39074 531021 531491 - arginine_repressor argR VED39075 531926 532864 + malate_dehydrogenase mdh VED39076 532926 533993 - protease degS VED39077 534083 535450 - serine_endoprotease degQ VED39078 535604 536002 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VED39079 536196 537323 + putative_ATP/GTP-binding_protein yhcM VED39080 537542 537970 + 50S_ribosomal_protein_L13 rplM VED39081 537986 538378 + 30S_ribosomal_protein_S9 rpsI VED39082 538773 539411 + stringent_starvation_protein_A sspA VED39083 539417 539914 + stringent_starvation_protein_B sspB VED39084 539957 541324 - C4-dicarboxylate_transporter dcuD VED39085 541704 542495 + GntR_family_transcriptional_regulator nanR VED39086 542617 543510 + N-acetylneuraminate_lyase nanA VED39087 543619 545109 + sialic_acid_transporter nanT_1 VED39088 545157 545846 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VED39089 545843 546718 + putative_transcriptional_regulator nanK VED39090 546715 547179 + beta-galactosidase yhcH VED39091 547255 547560 - IS600_orf-like_protein NCTC10537_00531 VED39092 547577 548056 - protein yhcG VED39093 548240 549658 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VED39094 549671 554224 - glutamate_synthase_subunit_alpha gltB VED39095 554806 555735 + putative_radical_SAM_protein NCTC10537_00535 VED39096 555831 558167 + aerobic_respiration_control_protein arcB VED39097 558397 559050 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VED39098 559047 559775 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VED39099 559772 560404 - protein yrbL VED39100 560618 560890 - phosphocarrier_protein ptsO VED39101 560887 561741 - putative_ATPase yhbJ VED39102 561787 562278 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN VED39103 562396 562683 - putative_sigma(54)_modulation_protein yhbH VED39104 562706 564139 - RNA_polymerase_sigma-54_factor_(sigma-N) rpoN VED39105 564187 564912 - lipopolysaccharide_ABC_transporter lptB VED39106 564919 565476 - lipopolysaccharide_transport_periplasmic_protein LptA yhbN VED39107 565445 566020 - putative_organic_solvent_tolerance_protein lptC VED39108 566017 566583 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC VED39109 566604 567590 - D-arabinose_5-phosphate_isomerase kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 VED39090 98 314 100.0 3e-107 PJR32596.1 VED39089 97 508 100.0 5e-179 PJR32598.1 VED39087 99 990 100.0 0.0 PJR32599.1 VED39086 100 611 100.0 0.0 PJR32600.1 VED39085 100 537 100.0 0.0 >> 175. CP047231_0 Source: Escherichia coli strain BL21-AI chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2960 Table of genes, locations, strands and annotations of subject cluster: QHB87658 3182384 3182950 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHB87659 3182947 3183522 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHB87660 3183491 3184048 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHB87661 3184055 3184780 + LPS_export_ABC_transporter_ATP-binding_protein lptB QHB87662 3184828 3186261 + RNA_polymerase_factor_sigma-54 rpoN QHB87663 3186284 3186571 + ribosome_hibernation_promoting_factor GSU80_15420 QHB87664 3186689 3187180 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHB87665 3187226 3188080 + RNase_adapter_RapZ rapZ QHB87666 3188077 3188349 + PTS_phosphocarrier_protein_NPr npr QHB87667 3188563 3189195 + PhoP_regulatory_network_protein_YrbL yrbL QHB87668 3189192 3189920 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHB87669 3189917 3190570 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHB87670 3190800 3193136 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHB87671 3193232 3194161 - TIGR01212_family_radical_SAM_protein GSU80_15460 QHB88932 3194836 3199296 + glutamate_synthase_large_subunit gltB QHB87672 3199309 3200727 + FAD-dependent_oxidoreductase GSU80_15470 QHB87673 3200911 3201390 + hypothetical_protein GSU80_15475 QHB87674 3201407 3201712 + transposase GSU80_15480 QHB87675 3201788 3202252 - YhcH/YjgK/YiaL_family_protein GSU80_15485 QHB87676 3202249 3203124 - ROK_family_protein GSU80_15490 QHB87677 3203121 3203810 - putative_N-acetylmannosamine-6-phosphate 2-epimerase GSU80_15495 QHB87678 3203858 3205348 - sialic_acid_transporter_NanT nanT QHB87679 3205457 3206350 - N-acetylneuraminate_lyase nanA QHB87680 3206472 3207263 - transcriptional_regulator_NanR nanR QHB87681 3207643 3209010 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHB87682 3209053 3209550 - ClpXP_protease_specificity-enhancing_factor sspB QHB87683 3209556 3210194 - stringent_starvation_protein_A sspA QHB87684 3210589 3210981 - 30S_ribosomal_protein_S9 rpsI QHB87685 3210997 3211425 - 50S_ribosomal_protein_L13 rplM QHB87686 3211644 3212771 - cell_division_protein_ZapE zapE QHB87687 3212965 3213363 + DUF1043_family_protein GSU80_15545 QHB87688 3213517 3214884 + serine_endoprotease_DegQ degQ QHB87689 3214974 3216041 + outer_membrane-stress_sensor_serine endopeptidase DegS degS QHB87690 3216103 3217041 - malate_dehydrogenase mdh QHB87691 3217476 3217946 + transcriptional_regulator_ArgR argR QHB87692 3218311 3218574 + peroxide/acid_stress_response_protein_YhcN yhcN QHB87693 3218630 3218902 - hypothetical_protein GSU80_15575 QHB87694 3218994 3220961 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHB87695 3220967 3221899 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHB87696 3221907 3222110 - DUF1656_domain-containing_protein GSU80_15590 QHB87697 3222293 3223222 + HTH-type_transcriptional_activator_AaeR aaeR QHB87698 3223350 3224795 - metalloprotease_TldD tldD QHB87699 3225225 3229025 - AsmA2_domain-containing_protein GSU80_15605 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QHB87675 98 314 100.0 3e-107 PJR32596.1 QHB87676 97 508 100.0 5e-179 PJR32598.1 QHB87678 99 990 100.0 0.0 PJR32599.1 QHB87679 100 611 100.0 0.0 PJR32600.1 QHB87680 100 537 100.0 0.0 >> 176. CP029371_0 Source: Escherichia coli strain C chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2960 Table of genes, locations, strands and annotations of subject cluster: AWY91176 3389180 3390625 + metalloprotease_TldD DIZ83_17585 AWY91177 3390753 3391682 - HTH-type_transcriptional_activator_AaeR DIZ83_17590 AWY91178 3391865 3392068 + protein_AaeX DIZ83_17595 AWY91179 3392076 3393008 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DIZ83_17600 AWY91180 3393014 3394981 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DIZ83_17605 AWY91181 3395073 3395345 + hypothetical_protein DIZ83_17610 AWY91182 3395401 3395664 - DUF1471_domain-containing_protein DIZ83_17615 AWY91183 3396029 3396499 - transcriptional_regulator_ArgR DIZ83_17620 AWY91184 3396934 3397872 + malate_dehydrogenase DIZ83_17625 AWY91185 3397934 3399001 - serine_endoprotease_DegS DIZ83_17630 AWY91186 3399091 3400458 - periplasmic_pH-dependent_serine_endoprotease DegQ DIZ83_17635 AWY91187 3400612 3401010 - DUF1043_domain-containing_protein DIZ83_17640 AWY91188 3401204 3402331 + cell_division_protein_ZapE DIZ83_17645 AWY91189 3402550 3402978 + 50S_ribosomal_protein_L13 DIZ83_17650 AWY91190 3402994 3403386 + 30S_ribosomal_protein_S9 DIZ83_17655 AWY92444 3403630 3403839 - hypothetical_protein DIZ83_17660 AWY91191 3403781 3404419 + stringent_starvation_protein_A DIZ83_17665 AWY91192 3404425 3404922 + stringent_starvation_protein_B DIZ83_17670 AWY91193 3404965 3406332 - C4-dicarboxylate_transporter_DcuC DIZ83_17675 DIZ83_17680 3406332 3406442 + transposase no_locus_tag AWY91194 3406712 3407503 + transcriptional_regulator_NanR nanR AWY91195 3407625 3408518 + N-acetylneuraminate_lyase nanA AWY91196 3408627 3410117 + MFS_transporter DIZ83_17695 AWY91197 3410165 3410854 + N-acetylmannosamine-6-phosphate_2-epimerase DIZ83_17700 AWY91198 3410851 3411726 + N-acetylmannosamine_kinase DIZ83_17705 AWY91199 3411723 3412187 + YhcH/YjgK/YiaL_family_protein DIZ83_17710 AWY91200 3412263 3412568 - transposase DIZ83_17715 AWY91201 3412585 3413064 - DUF1016_domain-containing_protein DIZ83_17720 AWY91202 3413248 3414666 - glutamate_synthase_small_subunit DIZ83_17725 AWY91203 3414679 3419139 - glutamate_synthase_subunit_alpha DIZ83_17730 DIZ83_17735 3419062 3419288 + hypothetical_protein no_locus_tag AWY91204 3419186 3419392 + hypothetical_protein DIZ83_17740 AWY92445 3419814 3420743 + TIGR01212_family_radical_SAM_protein DIZ83_17745 AWY91205 3420839 3423175 + hybrid_sensor_histidine_kinase/response regulator DIZ83_17750 AWY91206 3423405 3424058 + glutamine_amidotransferase DIZ83_17755 AWY91207 3424055 3424783 + monofunctional_biosynthetic_peptidoglycan transglycosylase DIZ83_17760 AWY91208 3424780 3425412 - protein_YrbL yrbL AWY91209 3425626 3425898 - phosphocarrier_protein_NPr DIZ83_17770 AWY91210 3425895 3426749 - RNase_adaptor_protein_RapZ DIZ83_17775 AWY91211 3426795 3427286 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN DIZ83_17780 AWY91212 3427404 3427691 - ribosome_hibernation_promoting_factor DIZ83_17785 AWY91213 3427714 3429147 - RNA_polymerase_sigma-54_factor DIZ83_17790 AWY91214 3429195 3429920 - ABC_transporter_ATP-binding_protein DIZ83_17795 AWY91215 3429927 3430484 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA DIZ83_17800 AWY91216 3430453 3431028 - LPS_export_ABC_transporter_periplasmic_protein LptC DIZ83_17805 AWY91217 3431025 3431591 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC AWY91218 3431612 3432598 - arabinose_5-phosphate_isomerase_KdsD DIZ83_17815 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AWY91199 98 314 100.0 3e-107 PJR32596.1 AWY91198 97 508 100.0 5e-179 PJR32598.1 AWY91196 99 990 100.0 0.0 PJR32599.1 AWY91195 100 611 100.0 0.0 PJR32600.1 AWY91194 100 537 100.0 0.0 >> 177. CP027430_0 Source: Escherichia coli strain AS19-RrmA- chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2960 Table of genes, locations, strands and annotations of subject cluster: AVM04906 2800161 2801606 + metalloprotease_TldD C6P57_14550 AVM04907 2801734 2802663 - HTH-type_transcriptional_activator_AaeR C6P57_14555 AVM04908 2802846 2803049 + protein_AaeX C6P57_14560 AVM04909 2803057 2803989 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C6P57_14565 AVM04910 2803995 2805962 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C6P57_14570 AVM04911 2806054 2806326 + hypothetical_protein C6P57_14575 AVM04912 2806382 2806645 - DUF1471_domain-containing_protein C6P57_14580 AVM04913 2807010 2807480 - transcriptional_regulator_ArgR C6P57_14585 AVM04914 2807915 2808853 + malate_dehydrogenase C6P57_14590 AVM04915 2808915 2809982 - serine_endoprotease_DegS C6P57_14595 AVM04916 2810072 2811439 - serine_endoprotease_DegQ C6P57_14600 AVM04917 2811593 2811991 - hypothetical_protein C6P57_14605 AVM04918 2812185 2813312 + cell_division_protein_ZapE C6P57_14610 AVM04919 2813531 2813959 + 50S_ribosomal_protein_L13 C6P57_14615 AVM04920 2813975 2814367 + 30S_ribosomal_protein_S9 C6P57_14620 AVM06676 2814611 2814820 - hypothetical_protein C6P57_14625 AVM04921 2814762 2815400 + stringent_starvation_protein_A C6P57_14630 AVM04922 2815406 2815903 + stringent_starvation_protein_B C6P57_14635 AVM04923 2815946 2817313 - C4-dicarboxylate_transporter C6P57_14640 C6P57_14645 2817313 2817423 + transposase no_locus_tag AVM04924 2817693 2818484 + transcriptional_regulator_NanR nanR AVM04925 2818606 2819499 + N-acetylneuraminate_lyase nanA AVM04926 2819608 2821098 + MFS_transporter C6P57_14660 AVM04927 2821146 2821835 + N-acetylmannosamine-6-phosphate_2-epimerase C6P57_14665 AVM04928 2821832 2822707 + N-acetylmannosamine_kinase C6P57_14670 AVM04929 2822704 2823168 + YhcH/YjgK/YiaL_family_protein C6P57_14675 AVM04930 2823244 2823549 - transposase C6P57_14680 AVM04931 2823566 2824045 - DUF1016_domain-containing_protein C6P57_14685 AVM04932 2824229 2825647 - glutamate_synthase_small_subunit C6P57_14690 AVM04933 2825660 2830120 - glutamate_synthase_subunit_alpha C6P57_14695 C6P57_14700 2830043 2830269 + hypothetical_protein no_locus_tag AVM04934 2830167 2830373 + hypothetical_protein C6P57_14705 AVM06677 2830795 2831724 + TIGR01212_family_radical_SAM_protein C6P57_14710 AVM04935 2831820 2834156 + hybrid_sensor_histidine_kinase/response regulator C6P57_14715 AVM04936 2834386 2835039 + glutamine_amidotransferase C6P57_14720 AVM04937 2835036 2835764 + monofunctional_biosynthetic_peptidoglycan transglycosylase C6P57_14725 AVM04938 2835761 2836393 - protein_YrbL yrbL AVM04939 2836607 2836879 - phosphocarrier_protein_NPr C6P57_14735 AVM04940 2836876 2837730 - RNase_adaptor_protein_RapZ C6P57_14740 AVM04941 2837776 2838267 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C6P57_14745 AVM04942 2838385 2838672 - ribosome_hibernation_promoting_factor C6P57_14750 AVM04943 2838695 2840128 - RNA_polymerase_sigma-54_factor C6P57_14755 AVM04944 2840176 2840901 - ABC_transporter_ATP-binding_protein C6P57_14760 AVM04945 2840908 2841465 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C6P57_14765 AVM04946 2841434 2842009 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC AVM04947 2842006 2842572 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC AVM04948 2842593 2843579 - arabinose-5-phosphate_isomerase_KdsD C6P57_14780 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AVM04929 98 314 100.0 3e-107 PJR32596.1 AVM04928 97 508 100.0 5e-179 PJR32598.1 AVM04926 99 990 100.0 0.0 PJR32599.1 AVM04925 100 611 100.0 0.0 PJR32600.1 AVM04924 100 537 100.0 0.0 >> 178. CP019961_0 Source: Escherichia coli strain HKUOPY1 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2960 Table of genes, locations, strands and annotations of subject cluster: AVT71550 2275003 2276448 + metalloprotease_TldD B2J87_11775 AVT71551 2276582 2277511 - HTH-type_transcriptional_activator_AaeR B2J87_11780 AVT71552 2277694 2277897 + protein_AaeX B2J87_11785 AVT71553 2277905 2278837 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA B2J87_11790 AVT71554 2278843 2280810 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB B2J87_11795 AVT71555 2280902 2281174 + hypothetical_protein B2J87_11800 AVT71556 2281230 2281493 - hypothetical_protein B2J87_11805 AVT71557 2281858 2282328 - arginine_repressor B2J87_11810 AVT71558 2282763 2283701 + malate_dehydrogenase B2J87_11815 AVT71559 2283763 2284830 - outer_membrane-stress_sensor_serine endopeptidase DegS B2J87_11820 AVT71560 2284920 2286287 - periplasmic_pH-dependent_serine_endoprotease DegQ B2J87_11825 AVT71561 2286441 2286839 - hypothetical_protein B2J87_11830 AVT71562 2287033 2288160 + cell_division_protein_ZapE B2J87_11835 AVT71563 2288379 2288807 + 50S_ribosomal_protein_L13 B2J87_11840 AVT71564 2288823 2289215 + 30S_ribosomal_protein_S9 B2J87_11845 AVT71565 2289610 2290248 + stringent_starvation_protein_A sspA AVT71566 2290254 2290751 + stringent_starvation_protein_B B2J87_11855 AVT71567 2290794 2292161 - C4-dicarboxylate_transporter B2J87_11860 B2J87_11865 2292161 2292271 + transposase no_locus_tag AVT71568 2292541 2293332 + transcriptional_regulator_NanR B2J87_11870 AVT71569 2293454 2294347 + N-acetylneuraminate_lyase B2J87_11875 AVT71570 2294456 2295946 + MFS_transporter B2J87_11880 AVT71571 2295994 2296683 + N-acetylmannosamine-6-phosphate_2-epimerase B2J87_11885 AVT71572 2296680 2297555 + N-acetylmannosamine_kinase B2J87_11890 AVT71573 2297552 2298016 + hypothetical_protein B2J87_11895 AVT71574 2298092 2298397 - transposase B2J87_11900 AVT71575 2298414 2298893 - hypothetical_protein B2J87_11905 AVT71576 2299077 2300495 - glutamate_synthase_small_subunit B2J87_11910 AVT71577 2300508 2304968 - glutamate_synthase_subunit_alpha B2J87_11915 B2J87_11920 2304891 2305117 + hypothetical_protein no_locus_tag AVT71578 2305015 2305221 + hypothetical_protein B2J87_11925 AVT73952 2305643 2306572 + TIGR01212_family_radical_SAM_protein B2J87_11930 AVT71579 2306668 2309004 + hybrid_sensor_histidine_kinase/response regulator B2J87_11935 AVT71580 2309234 2309887 + glutamine_amidotransferase B2J87_11940 AVT71581 2309884 2310612 + monofunctional_biosynthetic_peptidoglycan transglycosylase B2J87_11945 AVT71582 2310609 2311241 - hypothetical_protein B2J87_11950 AVT71583 2311455 2311727 - phosphocarrier_protein_NPr B2J87_11955 AVT71584 2311724 2312578 - RNase_adaptor_protein_RapZ B2J87_11960 AVT71585 2312624 2313115 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN B2J87_11965 AVT71586 2313233 2313520 - ribosome_hibernation_promoting_factor B2J87_11970 AVT71587 2313543 2314976 - RNA_polymerase_sigma-54_factor B2J87_11975 AVT71588 2315024 2315749 - ABC_transporter_ATP-binding_protein B2J87_11980 AVT71589 2315756 2316313 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA B2J87_11985 AVT71590 2316282 2316857 - LPS_export_ABC_transporter_periplasmic_protein LptC B2J87_11990 AVT71591 2316854 2317420 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC B2J87_11995 AVT71592 2317441 2318427 - arabinose_5-phosphate_isomerase_KdsD B2J87_12000 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AVT71573 98 314 100.0 3e-107 PJR32596.1 AVT71572 97 508 100.0 5e-179 PJR32598.1 AVT71570 99 990 100.0 0.0 PJR32599.1 AVT71569 100 611 100.0 0.0 PJR32600.1 AVT71568 100 537 100.0 0.0 >> 179. CP014269_0 Source: Escherichia coli B strain C3029, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2960 Table of genes, locations, strands and annotations of subject cluster: AMH28156 4007467 4008033 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase C3029_20000 AMH28157 4008030 4008605 + LPS_export_ABC_transporter_periplasmic_protein LptC C3029_20005 AMH28158 4008574 4009131 + lipopolysaccharide_transport_periplasmic_protein LptA C3029_20010 AMH28159 4009138 4009863 + LPS_export_ABC_transporter_ATP-binding_protein C3029_20015 AMH28160 4009911 4011344 + RNA_polymerase_factor_sigma-54 C3029_20020 AMH28161 4011367 4011654 + hypothetical_protein C3029_20025 AMH28162 4011772 4012263 + transcriptional_regulator C3029_20030 AMH28163 4012309 4013163 + RNase_adaptor_protein_RapZ C3029_20035 AMH28164 4013160 4013432 + phosphohistidinoprotein-hexose phosphotransferase C3029_20040 AMH28165 4013646 4014278 + hypothetical_protein C3029_20045 AMH28166 4014275 4015003 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AMH28167 4015000 4015653 - isoprenoid_biosynthesis_protein C3029_20055 AMH28168 4015883 4018219 - aerobic_respiration_two-component_sensor histidine kinase ArcB C3029_20060 AMH28833 4018315 4019244 - radical_SAM_protein C3029_20065 AMH28834 4019919 4024379 + glutamate_synthase_large_subunit gltB AMH28169 4024392 4025810 + glutamate_synthase C3029_20075 C3029_20080 4025994 4026398 + hypothetical_protein no_locus_tag AMH28170 4026490 4026795 + transposase C3029_20085 AMH28171 4026871 4027335 - hypothetical_protein C3029_20090 AMH28172 4027332 4028207 - N-acetylmannosamine_kinase C3029_20095 AMH28173 4028204 4028893 - N-acetylmannosamine-6-phosphate_2-epimerase C3029_20100 AMH28174 4028941 4030431 - sialic_acid_transporter C3029_20105 AMH28175 4030540 4031433 - N-acetylneuraminate_lyase C3029_20110 AMH28176 4031555 4032346 - transcriptional_regulator_NanR C3029_20115 AMH28177 4032726 4034093 + C4-dicarboxylate_transporter C3029_20120 AMH28178 4034136 4034633 - stringent_starvation_protein_B C3029_20125 AMH28179 4034639 4035277 - stringent_starvation_protein_A sspA AMH28180 4035672 4036064 - 30S_ribosomal_protein_S9 C3029_20135 AMH28181 4036080 4036508 - 50S_ribosomal_protein_L13 C3029_20140 AMH28182 4036727 4037854 - hypothetical_protein C3029_20145 AMH28835 4038048 4038446 + hypothetical_protein C3029_20150 AMH28183 4038600 4039967 + serine_endoprotease_DegQ C3029_20155 AMH28184 4040057 4041124 + outer_membrane-stress_sensor_serine endopeptidase DegS C3029_20160 AMH28185 4041186 4042124 - malate_dehydrogenase C3029_20165 AMH28186 4042559 4043029 + arginine_repressor C3029_20170 AMH28187 4043394 4043657 + hypothetical_protein C3029_20175 AMH28188 4043713 4043985 - hypothetical_protein C3029_20180 AMH28189 4044077 4046044 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C3029_20185 AMH28190 4046050 4046982 - efflux_transporter_periplasmic_adaptor_subunit C3029_20190 AMH28836 4046990 4047193 - transporter C3029_20195 AMH28191 4047376 4048305 + transcriptional_regulator C3029_20200 AMH28192 4048433 4049878 - metalloprotease_TldD tldD AMH28193 4050308 4054108 - hypothetical_protein C3029_20210 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AMH28171 98 314 100.0 3e-107 PJR32596.1 AMH28172 97 508 100.0 5e-179 PJR32598.1 AMH28174 99 990 100.0 0.0 PJR32599.1 AMH28175 100 611 100.0 0.0 PJR32600.1 AMH28176 100 537 100.0 0.0 >> 180. CP014268_0 Source: Escherichia coli B strain C2566, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2960 Table of genes, locations, strands and annotations of subject cluster: AMH23839 3917206 3917772 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase C2566_19380 AMH23840 3917769 3918344 + LPS_export_ABC_transporter_periplasmic_protein LptC C2566_19385 AMH23841 3918313 3918870 + lipopolysaccharide_transport_periplasmic_protein LptA C2566_19390 AMH23842 3918877 3919602 + LPS_export_ABC_transporter_ATP-binding_protein C2566_19395 AMH23843 3919650 3921083 + RNA_polymerase_factor_sigma-54 C2566_19400 AMH23844 3921106 3921393 + hypothetical_protein C2566_19405 AMH23845 3921511 3922002 + transcriptional_regulator C2566_19410 AMH23846 3922048 3922902 + RNase_adaptor_protein_RapZ C2566_19415 AMH23847 3922899 3923171 + phosphohistidinoprotein-hexose phosphotransferase C2566_19420 AMH23848 3923385 3924017 + hypothetical_protein C2566_19425 AMH23849 3924014 3924742 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AMH23850 3924739 3925392 - isoprenoid_biosynthesis_protein C2566_19435 AMH23851 3925622 3927958 - aerobic_respiration_two-component_sensor histidine kinase ArcB C2566_19440 AMH24516 3928054 3928983 - radical_SAM_protein C2566_19445 AMH24517 3929658 3934118 + glutamate_synthase_large_subunit gltB AMH23852 3934131 3935549 + glutamate_synthase C2566_19455 C2566_19460 3935733 3936137 + hypothetical_protein no_locus_tag AMH23853 3936229 3936534 + transposase C2566_19465 AMH23854 3936610 3937074 - hypothetical_protein C2566_19470 AMH23855 3937071 3937946 - N-acetylmannosamine_kinase C2566_19475 AMH23856 3937943 3938632 - N-acetylmannosamine-6-phosphate_2-epimerase C2566_19480 AMH23857 3938680 3940170 - sialic_acid_transporter C2566_19485 AMH23858 3940279 3941172 - N-acetylneuraminate_lyase C2566_19490 AMH23859 3941294 3942085 - transcriptional_regulator_NanR C2566_19495 AMH23860 3942465 3943832 + C4-dicarboxylate_transporter C2566_19500 AMH23861 3943875 3944372 - stringent_starvation_protein_B C2566_19505 AMH23862 3944378 3945016 - stringent_starvation_protein_A sspA AMH23863 3945411 3945803 - 30S_ribosomal_protein_S9 C2566_19515 AMH23864 3945819 3946247 - 50S_ribosomal_protein_L13 C2566_19520 AMH23865 3946466 3947593 - hypothetical_protein C2566_19525 AMH24518 3947787 3948185 + hypothetical_protein C2566_19530 AMH23866 3948339 3949706 + serine_endoprotease_DegQ C2566_19535 AMH23867 3949796 3950863 + outer_membrane-stress_sensor_serine endopeptidase DegS C2566_19540 AMH23868 3950925 3951863 - malate_dehydrogenase C2566_19545 AMH23869 3952298 3952768 + arginine_repressor C2566_19550 AMH23870 3953133 3953396 + hypothetical_protein C2566_19555 AMH23871 3953452 3953724 - hypothetical_protein C2566_19560 AMH23872 3953816 3955783 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C2566_19565 AMH23873 3955789 3956721 - efflux_transporter_periplasmic_adaptor_subunit C2566_19570 AMH24519 3956729 3956932 - transporter C2566_19575 AMH23874 3957115 3958044 + transcriptional_regulator C2566_19580 AMH23875 3958172 3959617 - metalloprotease_TldD tldD AMH23876 3960047 3963847 - hypothetical_protein C2566_19590 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AMH23854 98 314 100.0 3e-107 PJR32596.1 AMH23855 97 508 100.0 5e-179 PJR32598.1 AMH23857 99 990 100.0 0.0 PJR32599.1 AMH23858 100 611 100.0 0.0 PJR32600.1 AMH23859 100 537 100.0 0.0 >> 181. CP010816_0 Source: Escherichia coli strain BL21 (TaKaRa), complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2960 Table of genes, locations, strands and annotations of subject cluster: AJH11832 3179938 3180504 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase SR36_15750 AJH11833 3180501 3181076 + lipopolysaccharide_transporter SR36_15755 AJH11834 3181045 3181602 + lipopolysaccharide_transporter SR36_15760 AJH11835 3181609 3182334 + sugar_ABC_transporter_ATP-binding_protein SR36_15765 AJH11836 3182382 3183815 + RNA_polymerase_factor_sigma-54 SR36_15770 AJH11837 3183838 3184125 + ribosome_hibernation_promoting_factor_HPF SR36_15775 AJH11838 3184243 3184734 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) SR36_15780 AJH11839 3184780 3185634 + glmZ(sRNA)-inactivating_NTPase SR36_15785 AJH11840 3185631 3185903 + phosphohistidinoprotein-hexose phosphotransferase SR36_15790 AJH11841 3186117 3186749 + hypothetical_protein SR36_15795 AJH11842 3186746 3187474 - peptidoglycan_transglycosylase mtgA AJH11843 3187471 3188124 - isoprenoid_biosynthesis_protein SR36_15805 AJH11844 3188354 3190690 - aerobic_respiration_control_sensor_protein_ArcB SR36_15810 AJH13171 3190786 3191715 - hypothetical_protein SR36_15815 AJH13172 3192390 3196850 + glutamate_synthase gltB AJH11845 3196863 3198281 + glutamate_synthase SR36_15825 AJH11846 3198961 3199266 + transposase SR36_15835 AJH11847 3199342 3199806 - hypothetical_protein SR36_15840 AJH11848 3199803 3200678 - N-acetylmannosamine_kinase SR36_15845 AJH11849 3200675 3201364 - N-acetylmannosamine-6-phosphate_2-epimerase SR36_15850 AJH11850 3201412 3202902 - sialic_acid_transporter SR36_15855 AJH11851 3203011 3203904 - N-acetylneuraminate_lyase SR36_15860 AJH11852 3204026 3204817 - transcriptional_regulator_NanR SR36_15865 AJH11853 3205197 3206564 + C4-dicarboxylate_transporter SR36_15870 AJH11854 3206607 3207104 - Clp_protease_ClpP SR36_15875 AJH11855 3207110 3207748 - stringent_starvation_protein_A sspA AJH11856 3208143 3208535 - 30S_ribosomal_protein_S9 SR36_15885 AJH11857 3208551 3208979 - 50S_ribosomal_protein_L13 SR36_15890 AJH11858 3209198 3210325 - hypothetical_protein SR36_15895 AJH13173 3210519 3210917 + hypothetical_protein SR36_15900 AJH11859 3211071 3212438 + serine_endoprotease_DegQ SR36_15905 AJH11860 3212528 3213595 + serine_endoprotease SR36_15910 AJH11861 3213657 3214595 - malate_dehydrogenase SR36_15915 AJH11862 3215030 3215500 + arginine_repressor SR36_15920 AJH11863 3215865 3216128 + membrane_protein SR36_15925 AJH11864 3216184 3216456 - hypothetical_protein SR36_15930 AJH11865 3216548 3218515 - p-hydroxybenzoic_acid_efflux_subunit_AaeB SR36_15935 AJH11866 3218521 3219453 - p-hydroxybenzoic_acid_efflux_subunit_AaeA SR36_15940 AJH13174 3219461 3219664 - transporter SR36_15945 AJH11867 3219847 3220776 + transcriptional_regulator SR36_15950 AJH11868 3220904 3222349 - protease_TldD tldD AJH11869 3222779 3226579 - hypothetical_protein SR36_15960 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AJH11847 98 314 100.0 3e-107 PJR32596.1 AJH11848 97 508 100.0 5e-179 PJR32598.1 AJH11850 99 990 100.0 0.0 PJR32599.1 AJH11851 100 611 100.0 0.0 PJR32600.1 AJH11852 100 537 100.0 0.0 >> 182. CP010585_0 Source: Escherichia coli strain C41(DE3), complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2960 Table of genes, locations, strands and annotations of subject cluster: AJF78316 3210773 3211339 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase TH69_15955 AJF78317 3211336 3211911 + lipopolysaccharide_transporter TH69_15960 AJF78318 3211880 3212437 + lipopolysaccharide_transporter TH69_15965 AJF78319 3212444 3213169 + sugar_ABC_transporter_ATP-binding_protein TH69_15970 AJF78320 3213217 3214650 + RNA_polymerase_factor_sigma-54 TH69_15975 AJF78321 3214673 3214960 + ribosome_hibernation_promoting_factor_HPF TH69_15980 AJF78322 3215078 3215569 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) TH69_15985 AJF78323 3215615 3216469 + glmZ(sRNA)-inactivating_NTPase TH69_15990 AJF78324 3216466 3216738 + phosphohistidinoprotein-hexose phosphotransferase TH69_15995 AJF78325 3216952 3217584 + hypothetical_protein TH69_16000 AJF78326 3217581 3218309 - peptidoglycan_transglycosylase mtgA AJF78327 3218306 3218959 - isoprenoid_biosynthesis_protein TH69_16010 AJF78328 3219189 3221525 - aerobic_respiration_control_sensor_protein_ArcB TH69_16015 AJF79652 3221621 3222550 - hypothetical_protein TH69_16020 AJF79653 3223225 3227685 + glutamate_synthase gltB AJF78329 3227698 3229116 + glutamate_synthase TH69_16030 AJF78330 3229796 3230101 + transposase TH69_16040 AJF78331 3230177 3230641 - hypothetical_protein TH69_16045 AJF78332 3230638 3231513 - N-acetylmannosamine_kinase TH69_16050 AJF78333 3231510 3232199 - N-acetylmannosamine-6-phosphate_2-epimerase TH69_16055 AJF78334 3232247 3233737 - sialic_acid_transporter TH69_16060 AJF78335 3233846 3234739 - N-acetylneuraminate_lyase TH69_16065 AJF78336 3234861 3235652 - transcriptional_regulator_NanR TH69_16070 AJF78337 3236032 3237399 + C4-dicarboxylate_transporter TH69_16075 AJF78338 3237442 3237939 - Clp_protease_ClpP TH69_16080 AJF78339 3237945 3238583 - stringent_starvation_protein_A sspA AJF78340 3238978 3239370 - 30S_ribosomal_protein_S9 TH69_16090 AJF78341 3239386 3239814 - 50S_ribosomal_protein_L13 TH69_16095 AJF78342 3240033 3241160 - hypothetical_protein TH69_16100 AJF78343 3241354 3241752 + hypothetical_protein TH69_16105 AJF78344 3241906 3243273 + serine_endoprotease_DegQ TH69_16110 AJF78345 3243363 3244430 + serine_endoprotease TH69_16115 AJF78346 3244492 3245430 - malate_dehydrogenase TH69_16120 AJF78347 3245865 3246335 + arginine_repressor TH69_16125 AJF78348 3246700 3246963 + membrane_protein TH69_16130 AJF78349 3247019 3247291 - hypothetical_protein TH69_16135 AJF78350 3247383 3249350 - p-hydroxybenzoic_acid_efflux_subunit_AaeB TH69_16140 AJF78351 3249356 3250288 - p-hydroxybenzoic_acid_efflux_subunit_AaeA TH69_16145 AJF79654 3250296 3250499 - transporter TH69_16150 AJF78352 3250682 3251611 + transcriptional_regulator TH69_16155 AJF78353 3251739 3253184 - protease_TldD tldD AJF78354 3253614 3257414 - hypothetical_protein TH69_16165 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AJF78331 98 314 100.0 3e-107 PJR32596.1 AJF78332 97 508 100.0 5e-179 PJR32598.1 AJF78334 99 990 100.0 0.0 PJR32599.1 AJF78335 100 611 100.0 0.0 PJR32600.1 AJF78336 100 537 100.0 0.0 >> 183. CP010226_0 Source: Escherichia coli strain S1, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2960 Table of genes, locations, strands and annotations of subject cluster: APL41150 32339 33784 + protease_TldD tldD APL41151 33912 34841 - transcriptional_regulator RG64_00175 APL45369 35024 35227 + transporter RG64_00180 APL41152 35235 36167 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG64_00185 APL41153 36173 38140 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG64_00190 APL41154 38232 38504 + hypothetical_protein RG64_00195 APL41155 38560 38823 - membrane_protein RG64_00200 APL41156 39189 39659 - arginine_repressor RG64_00205 APL41157 40094 41032 + malate_dehydrogenase RG64_00210 APL41158 41094 42161 - serine_endoprotease RG64_00215 APL41159 42251 43618 - serine_endoprotease_DegQ RG64_00220 APL41160 43772 44170 - hypothetical_protein RG64_00225 APL41161 44364 45491 + hypothetical_protein RG64_00230 APL41162 45710 46138 + 50S_ribosomal_protein_L13 RG64_00235 APL41163 46154 46546 + 30S_ribosomal_protein_S9 RG64_00240 APL41164 46941 47579 + stringent_starvation_protein_A sspA APL41165 47585 48082 + Clp_protease_ClpP RG64_00250 APL41166 48125 49492 - C4-dicarboxylate_transporter RG64_00255 APL41167 49872 50663 + transcriptional_regulator_NanR RG64_00260 APL41168 50785 51678 + N-acetylneuraminate_lyase RG64_00265 APL41169 51787 53277 + sialic_acid_transporter RG64_00270 APL41170 53325 54014 + N-acetylmannosamine-6-phosphate_2-epimerase RG64_00275 APL41171 54011 54886 + N-acetylmannosamine_kinase RG64_00280 APL41172 54883 55347 + hypothetical_protein RG64_00285 APL41173 55423 55728 - transposase RG64_00290 APL41174 56408 57826 - glutamate_synthase RG64_00300 APL45370 57839 62299 - glutamate_synthase gltB APL45371 62974 63903 + hypothetical_protein RG64_00310 APL41175 63999 66335 + aerobic_respiration_control_sensor_protein_ArcB RG64_00315 APL41176 66565 67218 + isoprenoid_biosynthesis_protein RG64_00320 APL41177 67215 67943 + peptidoglycan_transglycosylase mtgA APL41178 67940 68572 - hypothetical_protein RG64_00330 APL41179 68785 69057 - phosphohistidinoprotein-hexose phosphotransferase RG64_00335 APL41180 69054 69908 - glmZ(sRNA)-inactivating_NTPase RG64_00340 APL41181 69954 70445 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG64_00345 APL41182 70563 70850 - ribosome_hibernation_promoting_factor_HPF RG64_00350 APL41183 70873 72306 - RNA_polymerase_factor_sigma-54 RG64_00355 APL41184 72354 73079 - sugar_ABC_transporter_ATP-binding_protein RG64_00360 APL41185 73086 73643 - lipopolysaccharide_transporter RG64_00365 APL41186 73612 74187 - lipopolysaccharide_transporter RG64_00370 APL41187 74184 74750 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG64_00375 APL41188 74771 75757 - D-arabinose_5-phosphate_isomerase RG64_00380 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 APL41172 98 314 100.0 3e-107 PJR32596.1 APL41171 97 508 100.0 5e-179 PJR32598.1 APL41169 99 990 100.0 0.0 PJR32599.1 APL41168 100 611 100.0 0.0 PJR32600.1 APL41167 100 537 100.0 0.0 >> 184. CP001665_0 Source: Escherichia coli 'BL21-Gold(DE3)pLysS AG', complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2960 Table of genes, locations, strands and annotations of subject cluster: ACT27572 520620 522065 + protease_TldD ECBD_0502 ACT27573 522193 523122 - putative_DNA-binding_transcriptional_regulator ECBD_0503 ACT27574 523305 523508 + conserved_hypothetical_protein ECBD_0504 ACT27575 523516 524448 + efflux_transporter,_RND_family,_MFP_subunit ECBD_0505 ACT27576 524454 526421 + p-hydroxybenzoic_acid_efflux_subunit_AaeB ECBD_0506 ACT27577 526513 526785 + conserved_hypothetical_protein ECBD_0507 ACT27578 526841 527104 - protein_YcfR ECBD_0508 ACT27579 527469 527939 - arginine_repressor,_ArgR ECBD_0509 ACT27580 527923 528087 - hypothetical_protein ECBD_0510 ACT27581 528374 529312 + malate_dehydrogenase,_NAD-dependent ECBD_0511 ACT27582 529374 530441 - periplasmic_serine_protease_DegS ECBD_0512 ACT27583 530531 531898 - protease_Do ECBD_0513 ACT27584 532052 532450 - protein_of_unknown_function_DUF1043 ECBD_0514 ACT27585 532644 533771 + AFG1-family_ATPase ECBD_0515 ACT27586 533990 534418 + ribosomal_protein_L13 ECBD_0516 ACT27587 534434 534826 + ribosomal_protein_S9 ECBD_0517 ACT27588 535221 535859 + Glutathione_S-transferase_domain_protein ECBD_0518 ACT27589 535865 536362 + Stringent_starvation_protein_B ECBD_0519 ACT27590 536405 537772 - anaerobic_c4-dicarboxylate_antiporter,_DcuC family ECBD_0520 ACT27591 538152 538943 + regulatory_protein_GntR_HTH ECBD_0521 ACT27592 539065 539958 + N-acetylneuraminate_lyase ECBD_0522 ACT27593 540067 541557 + sialic_acid_transporter ECBD_0523 ACT27594 541605 542294 + N-acylglucosamine-6-phosphate_2-epimerase ECBD_0524 ACT27595 542291 543166 + ROK_family_protein ECBD_0525 ACT27596 543163 543627 + conserved_hypothetical_protein ECBD_0526 ACT27597 543703 544008 - IS600_orf ECBD_0527 ACT27598 544025 544504 - protein_of_unknown_function_DUF1016 ECBD_0528 ACT27599 544688 546106 - glutamate_synthase,_small_subunit ECBD_0529 ACT27600 546119 550672 - Glutamate_synthase_(ferredoxin) ECBD_0530 ACT27601 551254 552183 + conserved_hypothetical_protein ECBD_0531 ACT27602 552279 554615 + multi-sensor_hybrid_histidine_kinase ECBD_0532 ACT27603 554845 555498 + ThiJ/PfpI_domain_protein ECBD_0533 ACT27604 555495 556223 + monofunctional_biosynthetic_peptidoglycan transglycosylase ECBD_0534 ACT27605 556220 556852 - conserved_hypothetical_protein ECBD_0535 ACT27606 557066 557338 - Phosphotransferase_system,_phosphocarrier protein HPr ECBD_0536 ACT27607 557335 558189 - conserved_hypothetical_protein ECBD_0537 ACT27608 558235 558726 - PTS_IIA-like_nitrogen-regulatory_protein_PtsN ECBD_0538 ACT27609 558844 559131 - sigma_54_modulation_protein/ribosomal_protein S30EA ECBD_0539 ACT27610 559154 560587 - RNA_polymerase,_sigma_54_subunit,_RpoN ECBD_0540 ACT27611 560635 561360 - ABC_transporter_related ECBD_0541 ACT27612 561367 561924 - lipopolysaccharide_transport_periplasmic_protein LptA ECBD_0542 ACT27613 561893 562468 - protein_of_unknown_function_DUF1239 ECBD_0543 ACT27614 562465 563031 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase, YrbI family ECBD_0544 ACT27615 563052 564038 - KpsF/GutQ_family_protein ECBD_0545 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 ACT27596 98 314 100.0 3e-107 PJR32596.1 ACT27595 97 508 100.0 5e-179 PJR32598.1 ACT27593 99 990 100.0 0.0 PJR32599.1 ACT27592 100 611 100.0 0.0 PJR32600.1 ACT27591 100 537 100.0 0.0 >> 185. CP000819_0 Source: Escherichia coli B str. REL606, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2960 Table of genes, locations, strands and annotations of subject cluster: ACT40712 3277508 3278074 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase yrbI ACT40713 3278071 3278646 + hypothetical_protein yrbK ACT40714 3278615 3279172 + predicted_transporter_subunit: periplasmic-binding component of ABC superfamily yhbN ACT40715 3279179 3279904 + predicted_transporter_subunit:_ATP-binding component of ABC superfamily yhbG ACT40716 3279952 3281385 + DNA-directed_RNA_polymerase_subunit_N rpoN ACT40717 3281408 3281695 + predicted_ribosome-associated,_sigma_54 modulation protein yhbH ACT40718 3281813 3282304 + sugar-specific_enzyme_IIA_component_of_PTS ptsN ACT40719 3282350 3283204 + hypothetical_protein yhbJ ACT40720 3283201 3283473 + phosphohistidinoprotein-hexose ptsO ACT40721 3283687 3284319 + hypothetical_protein yrbL ACT40722 3284316 3285044 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA ACT40723 3285041 3285694 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL ACT40724 3285924 3288260 - hybrid_sensory_histidine_kinase_in_two-component regulatory system with ArcA arcB ACT40725 3288356 3289285 - predicted_Fe-S_oxidoreductase yhcC ACT40726 3289867 3294420 + glutamate_synthase,_large_subunit gltB ACT40727 3294433 3295851 + glutamate_synthase,_4Fe-4S_protein,_small subunit gltD ACT40728 3296035 3296514 + hypothetical_protein yhcG ACT40729 3296495 3296836 + IS600_orf-like_protein ECB_03080 ACT40730 3296912 3297376 - hypothetical_protein yhcH ACT40731 3297373 3298248 - N-acetylmannosamine_kinase nanK ACT40732 3298245 3298934 - predicted_N-acetylmannosamine-6-P_epimerase nanE ACT40733 3298982 3300472 - sialic_acid_transporter nanT ACT40734 3300581 3301474 - N-acetylneuraminate_lyase nanA ACT40735 3301596 3302387 - transcriptional_regulator_NanR nanR ACT40736 3302767 3304134 + predicted_transporter dcuD ACT40737 3304177 3304674 - ClpXP_protease_specificity-enhancing_factor sspB ACT40738 3304680 3305318 - stringent_starvation_protein_A sspA ACT40739 3305713 3306105 - 30S_ribosomal_protein_S9 rpsI ACT40740 3306121 3306549 - 50S_ribosomal_protein_L13 rplM ACT40741 3306768 3307895 - conserved_hypothetical_protein_with_nucleoside triphosphate hydrolase domain yhcM ACT40742 3308089 3308487 + hypothetical_protein yhcB ACT40743 3308641 3310008 + serine_endoprotease,_periplasmic degQ ACT40744 3310098 3311165 + serine_endoprotease,_periplasmic degS ACT40745 3311227 3312165 - malate_dehydrogenase mdh ACT40746 3312600 3313070 + arginine_repressor argR ACT40747 3313435 3313698 + hypothetical_protein yhcN ACT40748 3313754 3314026 - predicted_barnase_inhibitor yhcO ACT40749 3314118 3316085 - p-hydroxybenzoic_acid_efflux_system_component yhcP ACT40750 3316091 3317023 - p-hydroxybenzoic_acid_efflux_system_component yhcQ ACT40751 3317031 3317234 - membrane_protein_of_efflux_system yhcR ACT40752 3317417 3318346 + predicted_DNA-binding_transcriptional_regulator, efflux system yhcS ACT40753 3318474 3319919 - predicted_peptidase tldD ACT40754 3320349 3324149 - conserved_membrane_protein,_predicted transporter yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 ACT40730 98 314 100.0 3e-107 PJR32596.1 ACT40731 97 508 100.0 5e-179 PJR32598.1 ACT40733 99 990 100.0 0.0 PJR32599.1 ACT40734 100 611 100.0 0.0 PJR32600.1 ACT40735 100 537 100.0 0.0 >> 186. LR134236_0 Source: Escherichia coli strain NCTC9008 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2959 Table of genes, locations, strands and annotations of subject cluster: VED00620 495110 496555 + TldD_protein tldD VED00621 496689 497618 - LysR_family_transcriptional_regulator aaeR VED00622 497801 498004 + protein_AaeX aaeX VED00623 498012 498944 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VED00624 498950 500917 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VED00625 501009 501281 + barnase_inhibitor yhcO VED00626 501338 501601 - protein_YcfR ycfR VED00627 501966 502436 - arginine_repressor argR VED00628 502871 503809 + malate_dehydrogenase mdh VED00629 503872 504939 - protease degS VED00630 505029 506396 - serine_endoprotease degQ VED00631 506550 506948 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VED00632 507142 508269 + putative_ATP/GTP-binding_protein yhcM VED00633 508488 508916 + 50S_ribosomal_protein_L13 rplM VED00634 508932 509324 + 30S_ribosomal_protein_S9 rpsI VED00635 509719 510357 + stringent_starvation_protein_A sspA VED00636 510363 510860 + stringent_starvation_protein_B sspB VED00637 510903 512270 - C4-dicarboxylate_transporter dcuD VED00638 512650 513441 + GntR_family_transcriptional_regulator nanR VED00639 513563 514456 + N-acetylneuraminate_lyase nanA VED00640 514565 516055 + sialic_acid_transporter nanT VED00641 516103 516792 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VED00642 516789 517664 + putative_transcriptional_regulator nanK VED00643 517661 518125 + beta-galactosidase yhcH VED00644 518201 518506 - IS600_orf-like_protein NCTC9008_00507 VED00645 518523 519002 - protein yhcG VED00646 519186 520604 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VED00647 520617 525170 - glutamate_synthase_subunit_alpha gltB VED00648 525752 526681 + putative_radical_SAM_protein NCTC9008_00511 VED00649 526777 529113 + aerobic_respiration_control_protein arcB VED00650 529343 529996 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VED00651 529993 530721 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VED00652 530718 531350 - protein yrbL VED00653 531564 531836 - phosphocarrier_protein ptsO VED00654 531833 532687 - putative_ATPase yhbJ VED00655 532733 533224 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN VED00656 533342 533629 - putative_sigma(54)_modulation_protein yhbH VED00657 533652 535085 - RNA_polymerase_sigma-54_factor_(sigma-N) rpoN VED00658 535133 535858 - lipopolysaccharide_ABC_transporter lptB VED00659 535865 536422 - lipopolysaccharide_transport_periplasmic_protein LptA yhbN VED00660 536391 536966 - putative_organic_solvent_tolerance_protein lptC VED00661 536963 537529 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC VED00662 537550 538536 - D-arabinose_5-phosphate_isomerase kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 VED00643 98 314 100.0 3e-107 PJR32596.1 VED00642 97 508 100.0 5e-179 PJR32598.1 VED00640 99 990 100.0 0.0 PJR32599.1 VED00639 100 611 100.0 0.0 PJR32600.1 VED00638 99 536 100.0 0.0 >> 187. LR134191_0 Source: Escherichia coli strain NCTC5934 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2959 Table of genes, locations, strands and annotations of subject cluster: VEB53478 498094 499539 + TldD_protein tldD VEB53480 499673 500602 - LysR_family_transcriptional_regulator aaeR VEB53482 500785 500988 + protein_AaeX aaeX VEB53484 500996 501928 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VEB53486 501934 503901 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VEB53488 503993 504265 + barnase_inhibitor yhcO VEB53490 504321 504584 - protein_YcfR ycfR VEB53491 504949 505419 - arginine_repressor argR VEB53493 505854 506618 + malate_dehydrogenase mdh VEB53495 506856 507923 - protease degS VEB53497 508013 509380 - serine_endoprotease degQ VEB53499 509534 509932 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VEB53501 510126 511253 + putative_ATP/GTP-binding_protein yhcM VEB53503 511472 511900 + 50S_ribosomal_protein_L13 rplM VEB53505 511916 512308 + 30S_ribosomal_protein_S9 rpsI VEB53506 512703 513341 + stringent_starvation_protein_A sspA_1 VEB53507 513347 513844 + stringent_starvation_protein_B sspB VEB53509 513887 515254 - C4-dicarboxylate_transporter dcuD VEB53511 515634 516425 + GntR_family_transcriptional_regulator nanR VEB53513 516547 517440 + N-acetylneuraminate_lyase nanA VEB53516 517549 519039 + sialic_acid_transporter nanT VEB53518 519087 519776 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VEB53520 519773 520648 + putative_transcriptional_regulator nanK VEB53522 520645 521109 + beta-galactosidase yhcH VEB53524 521185 521490 - IS600_orf-like_protein NCTC5934_00508 VEB53526 521507 521986 - protein yhcG VEB53528 522170 523588 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VEB53530 523601 527041 - glutamate_synthase_subunit_alpha gltB_1 VEB53532 527041 528153 - glutamate_synthase_subunit_alpha gltB_2 VEB53534 528735 529664 + putative_radical_SAM_protein NCTC5934_00513 VEB53536 529760 532096 + aerobic_respiration_control_protein arcB VEB53538 532326 532979 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VEB53540 532976 533704 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VEB53542 533701 534333 - protein yrbL VEB53544 534547 534819 - phosphocarrier_protein ptsO VEB53546 534816 535670 - putative_ATPase yhbJ VEB53549 535716 536207 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN VEB53552 536325 536612 - putative_sigma(54)_modulation_protein yhbH VEB53555 536635 538068 - RNA_polymerase_sigma-54_factor_(sigma-N) rpoN VEB53557 538116 538841 - lipopolysaccharide_ABC_transporter lptB VEB53559 538848 539405 - lipopolysaccharide_transport_periplasmic_protein LptA yhbN VEB53561 539374 539949 - putative_organic_solvent_tolerance_protein lptC VEB53563 539942 540514 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC VEB53565 540535 541521 - D-arabinose_5-phosphate_isomerase kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 VEB53522 98 314 100.0 3e-107 PJR32596.1 VEB53520 97 508 100.0 5e-179 PJR32598.1 VEB53516 99 990 100.0 0.0 PJR32599.1 VEB53513 100 611 100.0 0.0 PJR32600.1 VEB53511 99 536 100.0 0.0 >> 188. CP034787_0 Source: Escherichia coli strain ECCNB20-2 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2959 Table of genes, locations, strands and annotations of subject cluster: AZW02941 493414 494859 + metalloprotease_TldD tldD AZW02942 494993 495922 - HTH-type_transcriptional_activator_AaeR aaeR AZW02943 496105 496308 + DUF1656_domain-containing_protein CRG85_02390 AZW02944 496316 497248 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AZW02945 497254 499221 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AZW02946 499313 499585 + hypothetical_protein CRG85_02405 AZW02947 499641 499904 - DUF1471_domain-containing_protein CRG85_02410 AZW02948 500269 500739 - transcriptional_regulator_ArgR argR AZW02949 501174 502112 + malate_dehydrogenase CRG85_02420 AZW02950 502174 503241 - serine_endoprotease_DegS degS AZW02951 503331 504698 - serine_endoprotease_DegQ degQ AZW02952 504852 505250 - DUF1043_family_protein CRG85_02435 AZW02953 505444 506571 + cell_division_protein_ZapE zapE AZW02954 506790 507218 + 50S_ribosomal_protein_L13 CRG85_02445 AZW02955 507234 507626 + 30S_ribosomal_protein_S9 CRG85_02450 AZW02956 507544 507765 - hypothetical_protein CRG85_02455 AZW02957 508021 508659 + stringent_starvation_protein_A CRG85_02460 AZW02958 508665 509162 + ClpXP_protease_specificity-enhancing_factor CRG85_02465 AZW02959 509205 510572 - C4-dicarboxylate_transporter_DcuC dcuC AZW02960 510952 511743 + transcriptional_regulator_NanR CRG85_02475 AZW02961 511865 512758 + N-acetylneuraminate_lyase nanA AZW02962 512867 514357 + MFS_transporter CRG85_02485 AZW02963 514405 515094 + N-acetylmannosamine-6-phosphate_2-epimerase CRG85_02490 AZW02964 515091 515966 + N-acetylmannosamine_kinase CRG85_02495 AZW02965 515963 516427 + YhcH/YjgK/YiaL_family_protein CRG85_02500 AZW02966 516503 516808 - transposase CRG85_02505 AZW02967 516825 517304 - DUF1016_family_protein CRG85_02510 AZW02968 517488 518906 - glutamate_synthase_small_subunit CRG85_02515 AZW02969 518919 523379 - glutamate_synthase_subunit_alpha CRG85_02520 AZW02970 524054 524983 + TIGR01212_family_radical_SAM_protein CRG85_02525 AZW02971 525079 527415 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB AZW02972 527645 528298 + isoprenoid_biosynthesis_protein_ElbB elbB AZW02973 528295 529023 + monofunctional_biosynthetic_peptidoglycan transglycosylase CRG85_02540 AZW02974 529020 529652 - PhoP_regulatory_network_protein_YrbL yrbL AZW02975 529865 530137 - PTS_phosphocarrier_protein_NPr CRG85_02550 AZW02976 530134 530988 - RNase_adaptor_protein_RapZ CRG85_02555 AZW02977 531034 531525 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN AZW02978 531643 531930 - ribosome_hibernation_promoting_factor CRG85_02565 AZW02979 531953 533386 - RNA_polymerase_factor_sigma-54 CRG85_02570 AZW02980 533434 534159 - lipopolysaccharide_ABC_transporter_ATP-binding protein CRG85_02575 AZW02981 534166 534723 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA AZW02982 534692 535267 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC AZW02983 535264 535830 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC AZW02984 535851 536837 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AZW02965 98 314 100.0 3e-107 PJR32596.1 AZW02964 97 508 100.0 5e-179 PJR32598.1 AZW02962 99 990 100.0 0.0 PJR32599.1 AZW02961 100 611 100.0 0.0 PJR32600.1 AZW02960 99 536 100.0 0.0 >> 189. CP010170_0 Source: Escherichia coli strain H6, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2959 Table of genes, locations, strands and annotations of subject cluster: APK65177 686021 687466 + protease_TldD tldD APK65178 687600 688529 - transcriptional_regulator RG48_03395 APK68904 688712 688915 + transporter RG48_03400 APK65179 688923 689855 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG48_03405 APK65180 689861 691828 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG48_03410 APK65181 691920 692192 + hypothetical_protein RG48_03415 APK65182 692248 692511 - membrane_protein RG48_03420 APK65183 692876 693346 - arginine_repressor RG48_03425 APK65184 693781 694719 + malate_dehydrogenase RG48_03430 APK65185 694782 695849 - serine_endoprotease RG48_03435 APK65186 695939 697306 - serine_endoprotease_DegQ RG48_03440 APK65187 697460 697858 - hypothetical_protein RG48_03445 APK65188 698052 699179 + hypothetical_protein RG48_03450 APK65189 699398 699826 + 50S_ribosomal_protein_L13 RG48_03455 APK65190 699842 700234 + 30S_ribosomal_protein_S9 RG48_03460 APK65191 700629 701267 + stringent_starvation_protein_A sspA APK65192 701273 701770 + Clp_protease_ClpP RG48_03470 APK65193 701813 703180 - C4-dicarboxylate_transporter RG48_03475 APK65194 703561 704352 + transcriptional_regulator_NanR RG48_03480 APK65195 704474 705367 + N-acetylneuraminate_lyase RG48_03485 APK65196 705476 706966 + sialic_acid_transporter RG48_03490 APK65197 707014 707703 + N-acetylmannosamine-6-phosphate_2-epimerase RG48_03495 APK65198 707700 708575 + N-acetylmannosamine_kinase RG48_03500 APK65199 708572 709036 + hypothetical_protein RG48_03505 APK65200 709112 709417 - transposase RG48_03510 APK65201 710097 711515 - glutamate_synthase RG48_03520 APK68905 711528 715988 - glutamate_synthase gltB APK68906 716663 717592 + hypothetical_protein RG48_03530 APK65202 717688 720024 + aerobic_respiration_control_sensor_protein_ArcB RG48_03535 APK65203 720254 720907 + isoprenoid_biosynthesis_protein RG48_03540 APK65204 720904 721632 + peptidoglycan_transglycosylase mtgA APK65205 721629 722261 - hypothetical_protein RG48_03550 APK65206 722474 722746 - phosphohistidinoprotein-hexose phosphotransferase RG48_03555 APK65207 722743 723597 - glmZ(sRNA)-inactivating_NTPase RG48_03560 APK65208 723643 724134 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG48_03565 APK65209 724252 724539 - ribosome_hibernation_promoting_factor_HPF RG48_03570 APK65210 724562 725995 - RNA_polymerase_factor_sigma-54 RG48_03575 APK65211 726043 726768 - sugar_ABC_transporter_ATP-binding_protein RG48_03580 APK65212 726775 727332 - lipopolysaccharide_transporter RG48_03585 APK65213 727301 727876 - lipopolysaccharide_transporter RG48_03590 APK65214 727873 728439 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG48_03595 APK65215 728460 729446 - D-arabinose_5-phosphate_isomerase RG48_03600 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 APK65199 98 314 100.0 3e-107 PJR32596.1 APK65198 97 508 100.0 5e-179 PJR32598.1 APK65196 99 990 100.0 0.0 PJR32599.1 APK65195 100 611 100.0 0.0 PJR32600.1 APK65194 99 536 100.0 0.0 >> 190. CP010169_0 Source: Escherichia coli strain H5, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2959 Table of genes, locations, strands and annotations of subject cluster: APK60579 628922 629488 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG47_03135 APK60580 629485 630060 + lipopolysaccharide_transporter RG47_03140 APK60581 630029 630586 + lipopolysaccharide_transporter RG47_03145 APK60582 630593 631318 + sugar_ABC_transporter_ATP-binding_protein RG47_03150 APK60583 631366 632799 + RNA_polymerase_factor_sigma-54 RG47_03155 APK60584 632822 633109 + ribosome_hibernation_promoting_factor_HPF RG47_03160 APK60585 633227 633718 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG47_03165 APK60586 633764 634618 + glmZ(sRNA)-inactivating_NTPase RG47_03170 APK60587 634615 634887 + phosphohistidinoprotein-hexose phosphotransferase RG47_03175 APK60588 635100 635732 + hypothetical_protein RG47_03180 APK60589 635729 636457 - peptidoglycan_transglycosylase mtgA APK60590 636454 637107 - isoprenoid_biosynthesis_protein RG47_03190 APK60591 637337 639673 - aerobic_respiration_control_sensor_protein_ArcB RG47_03195 APK64389 639769 640698 - hypothetical_protein RG47_03200 APK64390 641373 645833 + glutamate_synthase gltB APK60592 645846 647264 + glutamate_synthase RG47_03210 APK60593 647944 648249 + transposase RG47_03220 APK60594 648325 648789 - hypothetical_protein RG47_03225 APK60595 648786 649661 - N-acetylmannosamine_kinase RG47_03230 APK60596 649658 650347 - N-acetylmannosamine-6-phosphate_2-epimerase RG47_03235 APK60597 650395 651885 - sialic_acid_transporter RG47_03240 APK60598 651994 652887 - N-acetylneuraminate_lyase RG47_03245 APK60599 653009 653800 - transcriptional_regulator_NanR RG47_03250 APK60600 654181 655548 + C4-dicarboxylate_transporter RG47_03255 APK60601 655591 656088 - Clp_protease_ClpP RG47_03260 APK60602 656094 656732 - stringent_starvation_protein_A sspA APK60603 657127 657519 - 30S_ribosomal_protein_S9 RG47_03270 APK60604 657535 657963 - 50S_ribosomal_protein_L13 RG47_03275 APK60605 658182 659309 - hypothetical_protein RG47_03280 APK60606 659503 659901 + hypothetical_protein RG47_03285 APK60607 660055 661422 + serine_endoprotease_DegQ RG47_03290 APK60608 661512 662579 + serine_endoprotease RG47_03295 APK60609 662642 663580 - malate_dehydrogenase RG47_03300 APK60610 664015 664485 + arginine_repressor RG47_03305 APK60611 664850 665113 + membrane_protein RG47_03310 APK60612 665169 665441 - hypothetical_protein RG47_03315 APK60613 665533 667500 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG47_03320 APK60614 667506 668438 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG47_03325 APK64391 668446 668649 - transporter RG47_03330 APK60615 668832 669761 + transcriptional_regulator RG47_03335 APK60616 669895 671340 - protease_TldD tldD APK60617 671770 675570 - hypothetical_protein RG47_03345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 APK60594 98 314 100.0 3e-107 PJR32596.1 APK60595 97 508 100.0 5e-179 PJR32598.1 APK60597 99 990 100.0 0.0 PJR32599.1 APK60598 100 611 100.0 0.0 PJR32600.1 APK60599 99 536 100.0 0.0 >> 191. CP014583_0 Source: Escherichia coli strain CFSAN004176, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2956 Table of genes, locations, strands and annotations of subject cluster: AOM56139 3415468 3416913 + metalloprotease_TldD BCV59_17415 AOM56140 3417041 3417970 - transcriptional_regulator BCV59_17420 AOM57890 3418153 3418356 + transporter BCV59_17425 AOM56141 3418364 3419296 + efflux_transporter_periplasmic_adaptor_subunit BCV59_17430 AOM56142 3419302 3421269 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BCV59_17435 AOM56143 3421361 3421633 + hypothetical_protein BCV59_17440 AOM56144 3421689 3421952 - hypothetical_protein BCV59_17445 AOM56145 3422316 3422786 - arginine_repressor BCV59_17450 AOM56146 3423221 3424159 + malate_dehydrogenase BCV59_17455 AOM56147 3424221 3425288 - outer_membrane-stress_sensor_serine endopeptidase DegS BCV59_17460 AOM56148 3425378 3426745 - serine_endoprotease_DegQ BCV59_17465 AOM56149 3426899 3427297 - hypothetical_protein BCV59_17470 AOM56150 3427491 3428618 + hypothetical_protein BCV59_17475 AOM56151 3428837 3429265 + 50S_ribosomal_protein_L13 BCV59_17480 AOM56152 3429281 3429673 + 30S_ribosomal_protein_S9 BCV59_17485 AOM56153 3430067 3430705 + stringent_starvation_protein_A sspA AOM56154 3430711 3431208 + ClpXP_protease_specificity-enhancing_factor BCV59_17495 AOM56155 3431252 3432619 - C4-dicarboxylate_transporter BCV59_17500 AOM56156 3432999 3433790 + transcriptional_regulator_NanR BCV59_17505 AOM56157 3433912 3434805 + N-acetylneuraminate_lyase BCV59_17510 AOM56158 3434914 3436404 + sialic_acid_transporter BCV59_17515 AOM56159 3436452 3437141 + N-acetylmannosamine-6-phosphate_2-epimerase BCV59_17520 AOM56160 3437138 3438013 + N-acetylmannosamine_kinase BCV59_17525 AOM56161 3438010 3438474 + hypothetical_protein BCV59_17530 AOM56162 3438550 3438855 - transposase BCV59_17535 BCV59_17540 3438947 3439351 - hypothetical_protein no_locus_tag AOM56163 3439535 3440953 - glutamate_synthase BCV59_17545 AOM57891 3440966 3445426 - glutamate_synthase_large_subunit BCV59_17550 AOM57892 3446101 3447030 + TIGR01212_family_radical_SAM_protein BCV59_17555 AOM56164 3447126 3449462 + aerobic_respiration_two-component_sensor histidine kinase ArcB BCV59_17560 AOM56165 3449692 3450345 + isoprenoid_biosynthesis_protein_ElbB BCV59_17565 AOM56166 3450342 3451070 + monofunctional_biosynthetic_peptidoglycan transglycosylase BCV59_17570 AOM56167 3451067 3451699 - hypothetical_protein BCV59_17575 AOM56168 3451913 3452185 - phosphohistidinoprotein-hexose phosphotransferase BCV59_17580 AOM56169 3452182 3453036 - RNase_adaptor_protein_RapZ BCV59_17585 AOM56170 3453082 3453573 - PTS_IIA-like_nitrogen-regulatory_protein_PtsN BCV59_17590 AOM56171 3453691 3453978 - ribosomal_subunit_interface_protein BCV59_17595 AOM56172 3454001 3455434 - RNA_polymerase_factor_sigma-54 BCV59_17600 AOM56173 3455482 3456207 - LPS_export_ABC_transporter_ATP-binding_protein BCV59_17605 AOM56174 3456214 3456771 - lipopolysaccharide_transport_periplasmic_protein LptA BCV59_17610 AOM56175 3456740 3457315 - LPS_export_ABC_transporter_periplasmic_protein LptC BCV59_17615 AOM56176 3457312 3457878 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BCV59_17620 AOM56177 3457899 3458885 - D-arabinose_5-phosphate_isomerase BCV59_17625 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AOM56161 98 311 100.0 7e-106 PJR32596.1 AOM56160 97 508 100.0 3e-179 PJR32598.1 AOM56158 99 990 100.0 0.0 PJR32599.1 AOM56157 100 611 100.0 0.0 PJR32600.1 AOM56156 99 536 100.0 0.0 >> 192. LR134209_0 Source: Escherichia coli strain NCTC11476 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2905 Table of genes, locations, strands and annotations of subject cluster: VEC07703 494455 495900 + TldD_protein tldD VEC07705 496028 496957 - LysR_family_transcriptional_regulator aaeR VEC07707 497140 497343 + protein_AaeX aaeX VEC07709 497351 498283 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VEC07711 498289 500256 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VEC07713 500348 500620 + barnase_inhibitor yhcO VEC07715 500676 500939 - protein_YcfR ycfR VEC07717 501304 501774 - arginine_repressor argR VEC07719 502209 503147 + malate_dehydrogenase mdh VEC07721 503210 504277 - protease degS VEC07723 504367 505734 - serine_endoprotease degQ VEC07726 505888 506286 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VEC07728 506480 507607 + putative_ATP/GTP-binding_protein yhcM VEC07730 507826 508254 + 50S_ribosomal_protein_L13 rplM VEC07732 508270 508662 + 30S_ribosomal_protein_S9 rpsI VEC07734 509057 509695 + stringent_starvation_protein_A sspA VEC07736 509701 510198 + stringent_starvation_protein_B sspB VEC07738 510241 511608 - C4-dicarboxylate_transporter dcuD_1 VEC07740 511988 512779 + GntR_family_transcriptional_regulator nanR VEC07742 512901 513794 + N-acetylneuraminate_lyase nanA VEC07744 513903 515393 + sialic_acid_transporter nanT VEC07746 515441 516130 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VEC07748 516127 517002 + putative_transcriptional_regulator nanK VEC07750 516999 517463 + beta-galactosidase yhcH VEC07752 517539 517844 - IS600_orf-like_protein NCTC11476_00507 VEC07754 517861 518340 - protein yhcG VEC07756 518524 519942 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VEC07758 519955 524508 - glutamate_synthase_subunit_alpha gltB VEC07760 525090 526019 + putative_radical_SAM_protein NCTC11476_00511 VEC07762 526115 528451 + aerobic_respiration_control_protein arcB VEC07764 528681 529334 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VEC07766 529331 530059 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VEC07768 530056 530688 - protein yrbL VEC07770 530902 531174 - phosphocarrier_protein ptsO VEC07772 531171 532025 - putative_ATPase yhbJ VEC07774 532071 532562 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN VEC07776 532680 532967 - putative_sigma(54)_modulation_protein yhbH VEC07778 532990 534423 - RNA_polymerase_sigma-54_factor_(sigma-N) rpoN VEC07780 534471 535196 - lipopolysaccharide_ABC_transporter lptB VEC07782 535203 535760 - lipopolysaccharide_transport_periplasmic_protein LptA yhbN VEC07784 535729 536304 - putative_organic_solvent_tolerance_protein lptC VEC07786 536301 536867 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC VEC07788 536888 537874 - D-arabinose_5-phosphate_isomerase kdsD_1 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 VEC07750 98 311 100.0 7e-106 PJR32597.1 VEC07746 99 456 100.0 1e-160 PJR32598.1 VEC07744 99 990 100.0 0.0 PJR32599.1 VEC07742 100 611 100.0 0.0 PJR32600.1 VEC07740 100 537 100.0 0.0 >> 193. CP027394_0 Source: Escherichia coli O104:H4 strain FDAARGOS_349 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2905 Table of genes, locations, strands and annotations of subject cluster: AVL31183 2434748 2435314 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC AVL31184 2435311 2435886 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AVL31185 2435855 2436412 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA CEQ27_13575 AVL31186 2436419 2437144 + ABC_transporter_ATP-binding_protein CEQ27_13580 AVL31187 2437192 2438625 + RNA_polymerase_sigma-54_factor CEQ27_13585 AVL31188 2438648 2438935 + ribosome_hibernation_promoting_factor CEQ27_13590 AVL31189 2439053 2439544 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN CEQ27_13595 AVL31190 2439590 2440444 + RNase_adaptor_protein_RapZ CEQ27_13600 AVL31191 2440441 2440713 + phosphocarrier_protein_NPr CEQ27_13605 AVL31192 2440926 2441558 + protein_YrbL yrbL AVL31193 2441555 2442283 - monofunctional_biosynthetic_peptidoglycan transglycosylase CEQ27_13615 AVL31194 2442280 2442933 - glutamine_amidotransferase CEQ27_13620 AVL31195 2443163 2445499 - hybrid_sensor_histidine_kinase/response regulator CEQ27_13625 AVL33917 2445595 2446524 - TIGR01212_family_radical_SAM_protein CEQ27_13630 AVL31196 2446916 2447152 - hypothetical_protein CEQ27_13635 CEQ27_13640 2447050 2447276 - hypothetical_protein no_locus_tag AVL31197 2447199 2451659 + glutamate_synthase_large_subunit CEQ27_13645 AVL31198 2451672 2453090 + glutamate_synthase CEQ27_13650 AVL31199 2453274 2453753 + DUF1016_domain-containing_protein CEQ27_13655 AVL31200 2453770 2454075 + transposase CEQ27_13660 AVL31201 2454151 2454615 - YhcH/YjgK/YiaL_family_protein CEQ27_13665 AVL31202 2454612 2455487 - N-acetylmannosamine_kinase CEQ27_13670 AVL31203 2455484 2456173 - N-acetylmannosamine-6-phosphate_2-epimerase CEQ27_13675 AVL31204 2456221 2457711 - MFS_transporter CEQ27_13680 AVL31205 2457820 2458713 - N-acetylneuraminate_lyase nanA AVL31206 2458835 2459626 - transcriptional_regulator_NanR nanR CEQ27_13695 2459896 2460006 - transposase no_locus_tag AVL31207 2460006 2461373 + C4-dicarboxylate_transporter CEQ27_13700 AVL31208 2461416 2461913 - stringent_starvation_protein_B CEQ27_13705 AVL31209 2461919 2462557 - stringent_starvation_protein_A CEQ27_13710 AVL31210 2462499 2462708 + hypothetical_protein CEQ27_13715 AVL33918 2462660 2462839 - hypothetical_protein CEQ27_13720 AVL31211 2462813 2463034 + hypothetical_protein CEQ27_13725 AVL31212 2462952 2463344 - 30S_ribosomal_protein_S9 CEQ27_13730 AVL31213 2463360 2463788 - 50S_ribosomal_protein_L13 CEQ27_13735 AVL31214 2464007 2465134 - cell_division_protein_ZapE CEQ27_13740 AVL31215 2465328 2465726 + hypothetical_protein CEQ27_13745 AVL31216 2465880 2467247 + periplasmic_pH-dependent_serine_endoprotease DegQ CEQ27_13750 AVL31217 2467337 2468404 + serine_endoprotease_DegS CEQ27_13755 AVL31218 2468467 2469405 - malate_dehydrogenase CEQ27_13760 AVL31219 2469840 2470310 + arginine_repressor CEQ27_13765 AVL31220 2470675 2470938 + DUF1471_domain-containing_protein CEQ27_13770 AVL31221 2470994 2471266 - hypothetical_protein CEQ27_13775 AVL31222 2471358 2473325 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CEQ27_13780 AVL31223 2473331 2474263 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CEQ27_13785 AVL31224 2474271 2474474 - protein_AaeX CEQ27_13790 AVL31225 2474657 2475586 + HTH-type_transcriptional_activator_AaeR CEQ27_13795 AVL31226 2475714 2477159 - metalloprotease_TldD CEQ27_13800 AVL31227 2477315 2481115 - AsmA2_domain-containing_protein CEQ27_13805 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AVL31201 98 311 100.0 7e-106 PJR32597.1 AVL31203 99 456 100.0 1e-160 PJR32598.1 AVL31204 99 990 100.0 0.0 PJR32599.1 AVL31205 100 611 100.0 0.0 PJR32600.1 AVL31206 100 537 100.0 0.0 >> 194. CP011331_0 Source: Escherichia coli O104:H4 str. C227-11, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2905 Table of genes, locations, strands and annotations of subject cluster: AKE87348 5144905 5146350 + protease_TldD tldD AKE87349 5146478 5147407 - transcriptional_regulator AAF13_25920 AKE87721 5147590 5147793 + transporter AAF13_25925 AKE87350 5147801 5148733 + p-hydroxybenzoic_acid_efflux_subunit_AaeA AAF13_25930 AKE87351 5148739 5150706 + p-hydroxybenzoic_acid_efflux_subunit_AaeB AAF13_25935 AKE87352 5150798 5151070 + hypothetical_protein AAF13_25940 AKE87353 5151126 5151389 - membrane_protein AAF13_25945 AKE87354 5151754 5152224 - arginine_repressor AAF13_25950 AKE87355 5152659 5153597 + malate_dehydrogenase AAF13_25955 AKE87356 5153660 5154727 - serine_endoprotease AAF13_25960 AKE87357 5154817 5156184 - serine_endoprotease_DegQ AAF13_25965 AKE87358 5156338 5156736 - hypothetical_protein AAF13_25970 AKE87359 5156930 5158057 + hypothetical_protein AAF13_25975 AKE87360 5158276 5158704 + 50S_ribosomal_protein_L13 AAF13_25980 AKE87361 5158720 5159112 + 30S_ribosomal_protein_S9 AAF13_25985 AKE87362 5159507 5160145 + stringent_starvation_protein_A sspA AKE87363 5160151 5160648 + Clp_protease_ClpP AAF13_25995 AKE87364 5160691 5162058 - C4-dicarboxylate_transporter AAF13_26000 AKE87365 5162438 5163229 + transcriptional_regulator_NanR AAF13_26005 AKE87366 5163351 5164244 + N-acetylneuraminate_lyase AAF13_26010 AKE87367 5164353 5165843 + sialic_acid_transporter AAF13_26015 AKE87368 5165891 5166580 + N-acetylmannosamine-6-phosphate_2-epimerase AAF13_26020 AKE87369 5166577 5167452 + N-acetylmannosamine_kinase AAF13_26025 AKE87370 5167449 5167913 + hypothetical_protein AAF13_26030 AKE87371 5167989 5168294 - transposase AAF13_26035 AKE87372 5168974 5170392 - glutamate_synthase AAF13_26045 AKE87722 5170405 5174865 - glutamate_synthase gltB AKE87723 5175540 5176469 + hypothetical_protein AAF13_26055 AKE87373 5176565 5178901 + aerobic_respiration_control_sensor_protein_ArcB AAF13_26060 AKE87374 5179131 5179784 + isoprenoid_biosynthesis_protein AAF13_26065 AKE87375 5179781 5180509 + peptidoglycan_transglycosylase mtgA AKE87376 5180506 5181138 - hypothetical_protein AAF13_26075 AKE87377 5181351 5181623 - phosphohistidinoprotein-hexose phosphotransferase AAF13_26080 AKE87378 5181620 5182474 - glmZ(sRNA)-inactivating_NTPase AAF13_26085 AKE87379 5182520 5183011 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) AAF13_26090 AKE87380 5183129 5183416 - ribosome_hibernation_promoting_factor_HPF AAF13_26095 AKE87381 5183439 5184872 - RNA_polymerase_factor_sigma-54 AAF13_26100 AKE87382 5184920 5185645 - sugar_ABC_transporter_ATP-binding_protein AAF13_26105 AKE87383 5185652 5186209 - lipopolysaccharide_transporter AAF13_26110 AKE87384 5186178 5186753 - lipopolysaccharide_transporter AAF13_26115 AKE87385 5186750 5187316 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase AAF13_26120 AKE87386 5187337 5188323 - D-arabinose_5-phosphate_isomerase AAF13_26125 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AKE87370 98 311 100.0 7e-106 PJR32597.1 AKE87368 99 456 100.0 1e-160 PJR32598.1 AKE87367 99 990 100.0 0.0 PJR32599.1 AKE87366 100 611 100.0 0.0 PJR32600.1 AKE87365 100 537 100.0 0.0 >> 195. CP010176_0 Source: Escherichia coli strain H10, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2905 Table of genes, locations, strands and annotations of subject cluster: APK81470 3292123 3292689 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG51_16285 APK81471 3292686 3293261 + lipopolysaccharide_transporter RG51_16290 APK81472 3293230 3293787 + lipopolysaccharide_transporter RG51_16295 APK81473 3293794 3294519 + sugar_ABC_transporter_ATP-binding_protein RG51_16300 APK81474 3294567 3296000 + RNA_polymerase_factor_sigma-54 RG51_16305 APK81475 3296023 3296310 + ribosome_hibernation_promoting_factor_HPF RG51_16310 APK81476 3296428 3296919 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG51_16315 APK81477 3296965 3297819 + glmZ(sRNA)-inactivating_NTPase RG51_16320 APK81478 3297816 3298088 + phosphohistidinoprotein-hexose phosphotransferase RG51_16325 APK81479 3298302 3298934 + hypothetical_protein RG51_16330 APK81480 3298931 3299659 - peptidoglycan_transglycosylase mtgA APK81481 3299656 3300309 - isoprenoid_biosynthesis_protein RG51_16340 APK81482 3300539 3302875 - aerobic_respiration_control_sensor_protein_ArcB RG51_16345 APK82982 3302971 3303900 - hypothetical_protein RG51_16350 APK82983 3304575 3309035 + glutamate_synthase gltB APK81483 3309048 3310466 + glutamate_synthase RG51_16360 APK81484 3311146 3311451 + transposase RG51_16370 APK81485 3311527 3311991 - hypothetical_protein RG51_16375 APK81486 3311988 3312863 - N-acetylmannosamine_kinase RG51_16380 APK81487 3312860 3313549 - N-acetylmannosamine-6-phosphate_2-epimerase RG51_16385 APK81488 3313597 3315087 - sialic_acid_transporter RG51_16390 APK81489 3315196 3316089 - N-acetylneuraminate_lyase RG51_16395 APK81490 3316211 3317002 - transcriptional_regulator_NanR RG51_16400 APK81491 3317382 3318749 + C4-dicarboxylate_transporter RG51_16405 APK81492 3318792 3319289 - Clp_protease_ClpP RG51_16410 APK81493 3319295 3319933 - stringent_starvation_protein_A sspA APK81494 3320328 3320720 - 30S_ribosomal_protein_S9 RG51_16420 APK81495 3320736 3321164 - 50S_ribosomal_protein_L13 RG51_16425 APK81496 3321383 3322510 - hypothetical_protein RG51_16430 APK81497 3322704 3323102 + hypothetical_protein RG51_16435 APK81498 3323256 3324623 + serine_endoprotease_DegQ RG51_16440 APK81499 3324713 3325780 + serine_endoprotease RG51_16445 APK81500 3325843 3326781 - malate_dehydrogenase RG51_16450 APK81501 3327216 3327686 + arginine_repressor RG51_16455 APK81502 3328051 3328314 + membrane_protein RG51_16460 APK81503 3328370 3328642 - hypothetical_protein RG51_16465 APK81504 3328734 3330701 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG51_16470 APK81505 3330707 3331639 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG51_16475 APK82984 3331647 3331850 - transporter RG51_16480 APK81506 3332033 3332962 + transcriptional_regulator RG51_16485 APK81507 3333090 3334535 - protease_TldD tldD APK81508 3334691 3338491 - hypothetical_protein RG51_16495 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 APK81485 98 311 100.0 7e-106 PJR32597.1 APK81487 99 456 100.0 1e-160 PJR32598.1 APK81488 99 990 100.0 0.0 PJR32599.1 APK81489 100 611 100.0 0.0 PJR32600.1 APK81490 100 537 100.0 0.0 >> 196. CP003301_0 Source: Escherichia coli O104:H4 str. 2009EL-2071, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2905 Table of genes, locations, strands and annotations of subject cluster: AFS88295 554551 555996 + protease_TldD tldD AFS88294 556124 557053 - transcriptional_regulator O3O_22895 AFS88293 557236 557439 + efflux_system_membrane_protein O3O_22890 AFS88292 557447 558379 + p-hydroxybenzoic_acid_efflux_subunit_AaeA O3O_22885 AFS88291 558385 560352 + p-hydroxybenzoic_acid_efflux_subunit_AaeB O3O_22880 AFS88290 560444 560716 + putative_barnase_inhibitor O3O_22875 AFS88289 560772 561035 - hypothetical_protein O3O_22870 AFS88288 561400 561870 - arginine_repressor O3O_22865 AFS88287 562305 563243 + malate_dehydrogenase O3O_22860 AFS88286 563306 564373 - serine_endoprotease O3O_22855 AFS88285 564463 565830 - serine_endoprotease O3O_22850 AFS88284 565984 566382 - hypothetical_protein O3O_22845 AFS88283 566576 567703 + ATPase,_AFG1_family O3O_22840 AFS88282 567922 568350 + 50S_ribosomal_protein_L13 rplM AFS88281 568366 568758 + 30S_ribosomal_protein_S9 rpsI AFS88280 569153 569791 + stringent_starvation_protein_A sspA AFS88279 569797 570294 + ClpXP_protease_specificity-enhancing_factor O3O_22820 AFS88278 570337 571704 - putative_cryptic_C4-dicarboxylate_transporter DcuD O3O_22815 AFS88277 572084 572875 + transcriptional_regulator_NanR O3O_22810 AFS88276 572997 573890 + N-acetylneuraminate_lyase O3O_22805 AFS88275 573999 575489 + putative_sialic_acid_transporter O3O_22800 AFS88274 575537 576226 + N-acetylmannosamine-6-phosphate_2-epimerase O3O_22795 AFS88273 576223 577098 + N-acetylmannosamine_kinase O3O_22790 AFS88272 577095 577559 + hypothetical_protein O3O_22785 AFS88271 577635 577940 - IS600_orf O3O_22780 AFS88270 577957 578436 - hypothetical_protein O3O_22775 AFS88269 578620 580038 - glutamate_synthase_subunit_beta gltD AFS88268 580051 584511 - glutamate_synthase_subunit_alpha gltB AFS88267 585186 586115 + putative_Fe-S_oxidoreductase O3O_22760 AFS88266 586211 588547 + aerobic_respiration_control_sensor_protein_ArcB O3O_22755 AFS88265 588777 589430 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain O3O_22750 AFS88264 589427 590155 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AFS88263 590152 590784 - hypothetical_protein O3O_22740 AFS88262 590997 591269 - phosphohistidinoprotein-hexose O3O_22735 AFS88261 591266 592120 - glmZ(sRNA)-inactivating_NTPase O3O_22730 AFS88260 592166 592657 - PTS_system_sugar_transporter_subunit_IIA O3O_22725 AFS88259 592775 593062 - ribosome_hibernation_promoting_factor_HPF O3O_22720 AFS88258 593085 594518 - RNA_polymerase_factor_sigma-54 O3O_22715 AFS88257 594566 595291 - lipopolysaccharide_ABC_transporter_ATP-binding protein O3O_22710 AFS88256 595298 595855 - lipopolysaccharide_transport_periplasmic_protein LptA O3O_22705 AFS88255 595824 596399 - lipopolysaccharide_exporter_periplasmic_protein O3O_22700 AFS88254 596396 596962 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase O3O_22695 AFS88253 596983 597969 - D-arabinose_5-phosphate_isomerase O3O_22690 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AFS88272 98 311 100.0 7e-106 PJR32597.1 AFS88274 99 456 100.0 1e-160 PJR32598.1 AFS88275 99 990 100.0 0.0 PJR32599.1 AFS88276 100 611 100.0 0.0 PJR32600.1 AFS88277 100 537 100.0 0.0 >> 197. CP003297_0 Source: Escherichia coli O104:H4 str. 2009EL-2050, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2905 Table of genes, locations, strands and annotations of subject cluster: AFS55277 565881 567326 + protease_TldD tldD AFS55278 567454 568383 - transcriptional_regulator O3M_02795 AFS55279 568566 568769 + efflux_system_membrane_protein O3M_02800 AFS55280 568777 569709 + p-hydroxybenzoic_acid_efflux_subunit_AaeA O3M_02805 AFS55281 569715 571682 + p-hydroxybenzoic_acid_efflux_subunit_AaeB O3M_02810 AFS55282 571774 572046 + putative_barnase_inhibitor O3M_02815 AFS55283 572102 572365 - hypothetical_protein O3M_02820 AFS55284 572730 573200 - arginine_repressor O3M_02825 AFS55285 573635 574573 + malate_dehydrogenase O3M_02830 AFS55286 574636 575703 - serine_endoprotease O3M_02835 AFS55287 575793 577160 - serine_endoprotease O3M_02840 AFS55288 577314 577712 - hypothetical_protein O3M_02845 AFS55289 577906 579033 + nucleoside_triphosphate_hydrolase_domain protein O3M_02850 AFS55290 579252 579680 + 50S_ribosomal_protein_L13 rplM AFS55291 579696 580088 + 30S_ribosomal_protein_S9 rpsI AFS55292 580483 581121 + stringent_starvation_protein_A sspA AFS55293 581127 581624 + ClpXP_protease_specificity-enhancing_factor O3M_02870 AFS55294 581667 583034 - putative_cryptic_C4-dicarboxylate_transporter DcuD O3M_02875 AFS55295 583414 584205 + transcriptional_regulator_NanR O3M_02880 AFS55296 584327 585220 + N-acetylneuraminate_lyase O3M_02885 AFS55297 585329 586819 + putative_sialic_acid_transporter O3M_02890 AFS55298 586867 587556 + N-acetylmannosamine-6-phosphate_2-epimerase O3M_02895 AFS55299 587553 588428 + N-acetylmannosamine_kinase O3M_02900 AFS55300 588425 588889 + hypothetical_protein O3M_02905 AFS55301 588965 589270 - IS600_orf O3M_02910 AFS55302 589287 589766 - hypothetical_protein O3M_02915 AFS55303 589950 591368 - glutamate_synthase_subunit_beta gltD AFS55304 591381 595841 - glutamate_synthase_subunit_alpha gltB AFS55305 596516 597445 + putative_Fe-S_oxidoreductase O3M_02930 AFS55306 597541 599877 + aerobic_respiration_control_sensor_protein_ArcB O3M_02935 AFS55307 600107 600760 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain O3M_02940 AFS55308 600757 601485 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AFS55309 601482 602114 - hypothetical_protein O3M_02950 AFS55310 602327 602599 - phosphohistidinoprotein-hexose O3M_02955 AFS55311 602596 603450 - glmZ(sRNA)-inactivating_NTPase O3M_02960 AFS55312 603496 603987 - PTS_system_sugar_transporter_subunit_IIA O3M_02965 AFS55313 604105 604392 - ribosome_hibernation_promoting_factor_HPF O3M_02970 AFS55314 604415 605848 - RNA_polymerase_factor_sigma-54 O3M_02975 AFS55315 605896 606621 - lipopolysaccharide_ABC_transporter_ATP-binding protein O3M_02980 AFS55316 606628 607185 - lipopolysaccharide_transport_periplasmic_protein LptA O3M_02985 AFS55317 607154 607729 - lipopolysaccharide_exporter_periplasmic_protein O3M_02990 AFS55318 607726 608292 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase O3M_02995 AFS55319 608313 609299 - D-arabinose_5-phosphate_isomerase O3M_03000 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AFS55300 98 311 100.0 7e-106 PJR32597.1 AFS55298 99 456 100.0 1e-160 PJR32598.1 AFS55297 99 990 100.0 0.0 PJR32599.1 AFS55296 100 611 100.0 0.0 PJR32600.1 AFS55295 100 537 100.0 0.0 >> 198. CP003289_0 Source: Escherichia coli O104:H4 str. 2011C-3493, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2905 Table of genes, locations, strands and annotations of subject cluster: AFS72478 561253 562698 + protease_TldD tldD AFS72479 562826 563755 - transcriptional_regulator O3K_02750 AFS72480 563938 564141 + efflux_system_membrane_protein O3K_02755 AFS72481 564149 565081 + p-hydroxybenzoic_acid_efflux_subunit_AaeA O3K_02760 AFS72482 565087 567054 + p-hydroxybenzoic_acid_efflux_subunit_AaeB O3K_02765 AFS72483 567146 567418 + putative_barnase_inhibitor O3K_02770 AFS72484 567474 567737 - hypothetical_protein O3K_02775 AFS72485 568102 568572 - arginine_repressor O3K_02780 AFS72486 569007 569945 + malate_dehydrogenase O3K_02785 AFS72487 570008 571075 - serine_endoprotease O3K_02790 AFS72488 571165 572532 - serine_endoprotease O3K_02795 AFS72489 572686 573084 - hypothetical_protein O3K_02800 AFS72490 573278 574405 + ATPase,_AFG1_family O3K_02805 AFS72491 574624 575052 + 50S_ribosomal_protein_L13 rplM AFS72492 575068 575460 + 30S_ribosomal_protein_S9 rpsI AFS72493 575855 576493 + stringent_starvation_protein_A sspA AFS72494 576499 576996 + ClpXP_protease_specificity-enhancing_factor O3K_02825 AFS72495 577039 578406 - putative_cryptic_C4-dicarboxylate_transporter DcuD O3K_02830 AFS72496 578786 579577 + transcriptional_regulator_NanR O3K_02835 AFS72497 579699 580592 + N-acetylneuraminate_lyase O3K_02840 AFS72498 580701 582191 + putative_sialic_acid_transporter O3K_02845 AFS72499 582239 582928 + N-acetylmannosamine-6-phosphate_2-epimerase O3K_02850 AFS72500 582925 583800 + N-acetylmannosamine_kinase O3K_02855 AFS72501 583797 584261 + hypothetical_protein O3K_02860 AFS72502 584337 584642 - IS600_orf O3K_02865 AFS72503 584659 585138 - hypothetical_protein O3K_02870 AFS72504 585322 586740 - glutamate_synthase_subunit_beta gltD AFS72505 586753 591213 - glutamate_synthase_subunit_alpha gltB AFS72506 591888 592817 + putative_Fe-S_oxidoreductase O3K_02885 AFS72507 592913 595249 + aerobic_respiration_control_sensor_protein_ArcB O3K_02890 AFS72508 595479 596132 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain O3K_02895 AFS72509 596129 596857 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AFS72510 596854 597486 - hypothetical_protein O3K_02905 AFS72511 597699 597971 - phosphohistidinoprotein-hexose O3K_02910 AFS72512 597968 598822 - glmZ(sRNA)-inactivating_NTPase O3K_02915 AFS72513 598868 599359 - PTS_system_sugar_transporter_subunit_IIA O3K_02920 AFS72514 599477 599764 - ribosome_hibernation_promoting_factor_HPF O3K_02925 AFS72515 599787 601220 - RNA_polymerase_factor_sigma-54 O3K_02930 AFS72516 601268 601993 - lipopolysaccharide_ABC_transporter_ATP-binding protein O3K_02935 AFS72517 602000 602557 - lipopolysaccharide_transport_periplasmic_protein LptA O3K_02940 AFS72518 602526 603101 - lipopolysaccharide_exporter_periplasmic_protein O3K_02945 AFS72519 603098 603664 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase O3K_02950 AFS72520 603685 604671 - D-arabinose_5-phosphate_isomerase O3K_02955 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AFS72501 98 311 100.0 7e-106 PJR32597.1 AFS72499 99 456 100.0 1e-160 PJR32598.1 AFS72498 99 990 100.0 0.0 PJR32599.1 AFS72497 100 611 100.0 0.0 PJR32600.1 AFS72496 100 537 100.0 0.0 >> 199. CP013662_0 Source: Escherichia coli strain 08-00022, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2904 Table of genes, locations, strands and annotations of subject cluster: ANP09209 3851300 3851866 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase CP48_19535 ANP09210 3851863 3852438 + LPS_export_ABC_transporter_periplasmic_protein LptC CP48_19540 ANP09211 3852407 3852964 + lipopolysaccharide_transport_periplasmic_protein LptA CP48_19545 ANP09212 3852971 3853696 + LPS_export_ABC_transporter_ATP-binding_protein CP48_19550 ANP09213 3853744 3855177 + RNA_polymerase_sigma-54_factor CP48_19555 ANP09214 3855200 3855487 + hypothetical_protein CP48_19560 ANP09215 3855605 3856096 + transcriptional_regulator CP48_19565 ANP09216 3856142 3856996 + RNase_adaptor_protein_RapZ CP48_19570 ANP09217 3856993 3857265 + phosphohistidinoprotein-hexose phosphotransferase CP48_19575 ANP09218 3857479 3858111 + hypothetical_protein CP48_19580 ANP09219 3858108 3858836 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA ANP09220 3858833 3859486 - isoprenoid_biosynthesis_protein CP48_19590 ANP09221 3859716 3862052 - aerobic_respiration_two-component_sensor histidine kinase ArcB CP48_19595 ANP09222 3862148 3863077 - radical_SAM_protein CP48_19600 ANP09223 3863752 3868212 + glutamate_synthase_large_subunit gltB ANP09224 3868225 3869643 + glutamate_synthase CP48_19610 CP48_19615 3869827 3870231 + hypothetical_protein no_locus_tag ANP09225 3870323 3870628 + transposase CP48_19620 ANP09226 3870704 3871168 - hypothetical_protein CP48_19625 ANP09227 3871165 3872040 - N-acetylmannosamine_kinase CP48_19630 ANP09228 3872037 3872726 - N-acetylmannosamine-6-phosphate_2-epimerase CP48_19635 ANP09229 3872774 3874264 - sialic_acid_transporter CP48_19640 ANP09230 3874373 3875266 - N-acetylneuraminate_lyase CP48_19645 ANP09231 3875388 3876179 - transcriptional_regulator_NanR CP48_19650 ANP09232 3876559 3877926 + C4-dicarboxylate_transporter CP48_19655 ANP09233 3877969 3878466 - stringent_starvation_protein_B CP48_19660 ANP09234 3878472 3879110 - stringent_starvation_protein_A sspA ANP09235 3879505 3879897 - 30S_ribosomal_protein_S9 CP48_19670 ANP09236 3879913 3880341 - 50S_ribosomal_protein_L13 CP48_19675 ANP09237 3880560 3881687 - hypothetical_protein CP48_19680 ANP09238 3881881 3882279 + hypothetical_protein CP48_19685 ANP09239 3882564 3883799 + serine_endoprotease_DegQ CP48_19690 ANP09240 3883889 3884956 + outer_membrane-stress_sensor_serine endopeptidase DegS CP48_19695 ANP09241 3885019 3885957 - malate_dehydrogenase CP48_19700 ANP09242 3886392 3886862 + arginine_repressor CP48_19705 ANP09243 3887229 3887492 + hypothetical_protein CP48_19710 ANP09244 3887548 3887820 - hypothetical_protein CP48_19715 ANP09245 3887912 3889879 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CP48_19720 ANP09246 3889885 3890817 - efflux_transporter_periplasmic_adaptor_subunit CP48_19725 ANP09247 3890825 3891028 - transporter CP48_19730 ANP09248 3891211 3892140 + transcriptional_regulator CP48_19735 ANP09249 3892274 3893719 - metalloprotease_TldD tldD ANP09250 3893875 3897675 - hypothetical_protein CP48_19745 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 ANP09226 98 311 100.0 7e-106 PJR32597.1 ANP09228 99 456 100.0 1e-160 PJR32598.1 ANP09229 99 990 100.0 0.0 PJR32599.1 ANP09230 100 611 100.0 0.0 PJR32600.1 ANP09231 99 536 100.0 0.0 >> 200. CP010344_0 Source: Escherichia coli ECC-1470, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2904 Table of genes, locations, strands and annotations of subject cluster: AJG10230 3515327 3515893 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC AJG10231 3515890 3516465 + lipopolysaccharide_export,_IM-tethered periplasmic protein of the LptBFGC export complex lptC AJG10232 3516434 3516991 + periplasmic_LPS-binding_protein lptA AJG10233 3516998 3517723 + lipopolysaccharide_export_ABC_transporter ATP-binding protein of the LptBFGC export complex lptB AJG10234 3517771 3519204 + RNA_polymerase,_sigma_54_(sigma_N)_factor rpoN AJG10235 3519227 3519514 + ribosome_hibernation_promoting_factor_HPF hpf AJG10236 3519632 3520123 + sugar-specific_enzyme_IIA_component_of_PTS ptsN AJG10237 3520169 3521023 + adaptor_protein_RapZ_for_GlmZ/GlmY_sRNA_decay yhbJ AJG10238 3521020 3521292 + phosphohistidinoprotein-hexose npr AJG10239 3521506 3522138 + Mg(2+)-starvation-stimulated_protein yrbL AJG10240 3522135 3522863 - biosynthetic_peptidoglycan_transglycosylase mtgA AJG10241 3522860 3523513 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain protein elbB AJG10242 3523743 3526079 - aerobic_respiration_control_sensor_histidine arcB AJG10243 3526175 3527104 - putative_Fe-S_oxidoreductase,_radical_SAM superfamily protein yhcC AJG10244 3527779 3532239 + glutamate_synthase,_large_subunit gltB AJG10245 3532252 3533670 + glutamate_synthase,_4Fe-4S_protein,_small subunit gltD AJG10246 3533854 3534333 + hypothetical_protein E1470_c33580 AJG10247 3534350 3534655 + IS600_orf-like_protein E1470_c33590 AJG10248 3534731 3535195 - hypothetical_protein E1470_c33600 AJG10249 3535192 3536067 - N-acetylmannosamine_kinase nanK AJG10250 3536064 3536753 - putative_N-acetylmannosamine-6-P_epimerase nanE AJG10251 3536801 3538291 - sialic_acid_transporter nanT AJG10252 3538400 3539293 - N-acetylneuraminate_lyase nanA AJG10253 3539415 3540206 - transcriptional_repressor_of_the_nan_operon, induced by sialic acid nanR AJG10254 3540586 3541953 + putative_transporter dcuD AJG10255 3541996 3542493 - ClpXP_protease_specificity_enhancing_factor sspB AJG10256 3542499 3543137 - stringent_starvation_protein_A sspA AJG10257 3543532 3543924 - 30S_ribosomal_subunit_protein_S9 rpsI AJG10258 3543940 3544368 - 50S_ribosomal_subunit_protein_L13 rplM AJG10259 3544587 3545714 - putative_AFG1-like_family_P-loop_ATPase yhcM AJG10260 3545908 3546306 + putative_inner_membrane-anchored_protein yhcB AJG10261 3546460 3547827 + serine_endoprotease,_periplasmic degQ AJG10262 3547917 3548984 + serine_endoprotease,_periplasmic degS AJG10263 3549046 3549984 - malate_dehydrogenase,_NAD(P)-binding mdh AJG10264 3550419 3550889 + l-arginine-responsive_arginine_metabolism regulon transcriptional regulator argR AJG10265 3551254 3551517 + cadmium_and_peroxide_resistance_protein, stress-induced yhcN AJG10266 3551573 3551845 - putative_barnase_inhibitor yhcO AJG10267 3551937 3553904 - p-hydroxybenzoic_acid_efflux_system_component aaeB AJG10268 3553910 3554842 - p-hydroxybenzoic_acid_efflux_system_component aaeA AJG10269 3554850 3555053 - putative_inner_membrane_efflux_pump_associated protein aaeX AJG10270 3555236 3556165 + transcriptional_regulator_for_aaeXAB_operon aaeR AJG10271 3556293 3557738 - putative_peptidase tldD AJG10272 3557894 3561694 - putative_transporter yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AJG10248 98 311 100.0 7e-106 PJR32597.1 AJG10250 99 456 100.0 1e-160 PJR32598.1 AJG10251 99 990 100.0 0.0 PJR32599.1 AJG10252 100 611 100.0 0.0 PJR32600.1 AJG10253 99 536 100.0 0.0 >> 201. CP010236_0 Source: Escherichia coli strain S42, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2886 Table of genes, locations, strands and annotations of subject cluster: APL71952 3270990 3271556 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG70_16190 APL71953 3271553 3272128 + lipopolysaccharide_transporter RG70_16195 APL71954 3272097 3272654 + lipopolysaccharide_transporter RG70_16200 APL71955 3272661 3273386 + sugar_ABC_transporter_ATP-binding_protein RG70_16205 APL71956 3273434 3274867 + RNA_polymerase_factor_sigma-54 RG70_16210 APL71957 3274890 3275177 + ribosome_hibernation_promoting_factor_HPF RG70_16215 APL71958 3275295 3275786 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG70_16220 APL71959 3275832 3276686 + glmZ(sRNA)-inactivating_NTPase RG70_16225 APL71960 3276683 3276955 + phosphohistidinoprotein-hexose phosphotransferase RG70_16230 APL71961 3277169 3277801 + hypothetical_protein RG70_16235 APL71962 3277798 3278526 - peptidoglycan_transglycosylase mtgA APL71963 3278523 3279176 - isoprenoid_biosynthesis_protein RG70_16245 APL71964 3279406 3281742 - aerobic_respiration_control_sensor_protein_ArcB RG70_16250 APL73516 3281838 3282767 - hypothetical_protein RG70_16255 APL73517 3283442 3287902 + glutamate_synthase gltB APL71965 3287915 3289333 + glutamate_synthase RG70_16265 APL71966 3290013 3290318 + transposase RG70_16275 APL71967 3290394 3290858 - hypothetical_protein RG70_16280 APL71968 3290855 3291730 - N-acetylmannosamine_kinase RG70_16285 APL71969 3291727 3292416 - N-acetylmannosamine-6-phosphate_2-epimerase RG70_16290 APL71970 3292464 3293954 - sialic_acid_transporter RG70_16295 APL71971 3294063 3294956 - N-acetylneuraminate_lyase RG70_16300 APL71972 3295078 3295869 - transcriptional_regulator_NanR RG70_16305 APL71973 3296249 3297616 + C4-dicarboxylate_transporter RG70_16310 APL71974 3297659 3298156 - Clp_protease_ClpP RG70_16315 APL71975 3298162 3298800 - stringent_starvation_protein_A sspA APL71976 3299195 3299587 - 30S_ribosomal_protein_S9 RG70_16325 APL71977 3299603 3300031 - 50S_ribosomal_protein_L13 RG70_16330 APL71978 3300250 3301377 - hypothetical_protein RG70_16335 APL71979 3301571 3301969 + hypothetical_protein RG70_16340 APL71980 3302123 3303490 + serine_endoprotease_DegQ RG70_16345 APL71981 3303580 3304647 + serine_endoprotease RG70_16350 APL71982 3304710 3305648 - malate_dehydrogenase RG70_16355 APL71983 3306083 3306553 + arginine_repressor RG70_16360 APL71984 3306918 3307181 + membrane_protein RG70_16365 APL71985 3307237 3307509 - hypothetical_protein RG70_16370 APL71986 3307601 3309568 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG70_16375 APL71987 3309574 3310506 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG70_16380 APL73518 3310514 3310717 - transporter RG70_16385 APL71988 3310900 3311829 + transcriptional_regulator RG70_16390 APL71989 3311963 3313408 - protease_TldD tldD APL71990 3313838 3317638 - hypothetical_protein RG70_16400 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 APL71967 97 292 100.0 1e-98 PJR32597.1 APL71969 99 456 100.0 1e-160 PJR32598.1 APL71970 99 990 100.0 0.0 PJR32599.1 APL71971 100 611 100.0 0.0 PJR32600.1 APL71972 100 537 100.0 0.0 >> 202. CP045975_0 Source: Escherichia coli strain AUSMDU00002545 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2879 Table of genes, locations, strands and annotations of subject cluster: QGJ98208 542696 544141 + metalloprotease_TldD tldD QGJ98209 544275 545204 - HTH-type_transcriptional_activator_AaeR aaeR QGJ98210 545387 545590 + DUF1656_domain-containing_protein GJD97_02660 QGJ98211 545598 546527 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QGJ98212 546533 548500 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QGJ98213 548592 548864 + hypothetical_protein GJD97_02675 QGJ98214 548920 549183 - peroxide/acid_stress_response_protein_YhcN yhcN QGJ98215 549548 550018 - transcriptional_regulator_ArgR argR QGJ98216 550453 551391 + malate_dehydrogenase mdh QGJ98217 551455 552522 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QGJ98218 552612 553979 - serine_endoprotease_DegQ degQ QGJ98219 554133 554531 - DUF1043_family_protein GJD97_02705 QGJ98220 554725 555852 + cell_division_protein_ZapE zapE QGJ98221 556071 556499 + 50S_ribosomal_protein_L13 rplM QGJ98222 556515 556907 + 30S_ribosomal_protein_S9 rpsI QGJ98223 557302 557940 + stringent_starvation_protein_A sspA QGJ98224 557946 558443 + ClpXP_protease_specificity-enhancing_factor sspB QGJ98225 558478 559842 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QGJ98226 560222 561013 + transcriptional_regulator_NanR nanR QGJ98227 561135 562028 + N-acetylneuraminate_lyase nanA QGJ98228 562137 563627 + sialic_acid_transporter_NanT nanT QGJ98229 563675 564364 + putative_N-acetylmannosamine-6-phosphate 2-epimerase GJD97_02755 QGJ98230 564361 565236 + ROK_family_protein GJD97_02760 QGJ98231 565233 565697 + YhcH/YjgK/YiaL_family_protein GJD97_02765 GJD97_02770 565757 566804 - DUF1016_family_protein no_locus_tag QGJ98232 566988 568406 - NAD(P)-binding_protein GJD97_02775 QGK02619 568419 572879 - glutamate_synthase_large_subunit gltB QGJ98233 573553 574482 + TIGR01212_family_radical_SAM_protein GJD97_02785 QGJ98234 574578 576914 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QGJ98235 577144 577797 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QGJ98236 577794 578522 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QGJ98237 578519 579151 - PhoP_regulatory_network_protein_YrbL yrbL QGJ98238 579365 579637 - PTS_phosphocarrier_protein_NPr npr QGJ98239 579634 580488 - RNase_adapter_RapZ rapZ QGJ98240 580534 581025 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QGJ98241 581143 581430 - ribosome_hibernation_promoting_factor GJD97_02825 QGJ98242 581453 582886 - RNA_polymerase_factor_sigma-54 rpoN QGJ98243 582934 583659 - LPS_export_ABC_transporter_ATP-binding_protein lptB QGJ98244 583666 584223 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QGJ98245 584192 584767 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QGJ98246 584764 585330 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QGJ98247 585351 586337 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QGJ98231 100 318 100.0 6e-109 PJR32596.1 QGJ98230 100 570 100.0 0.0 PJR32597.1 QGJ98229 100 461 100.0 2e-162 PJR32598.1 QGJ98228 100 993 100.0 0.0 PJR32600.1 QGJ98226 100 537 100.0 0.0 >> 203. CP032808_0 Source: Escherichia coli strain ERL04-3476 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2879 Table of genes, locations, strands and annotations of subject cluster: QFH23622 593518 594963 + metalloprotease_TldD tldD QFH23623 595097 596026 - HTH-type_transcriptional_activator_AaeR aaeR QFH23624 596209 596412 + DUF1656_domain-containing_protein D8Z68_03050 QFH23625 596420 597349 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFH23626 597355 599322 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFH23627 599414 599686 + hypothetical_protein D8Z68_03065 QFH23628 599742 600005 - DUF1471_domain-containing_protein D8Z68_03070 QFH23629 600370 600840 - transcriptional_regulator_ArgR argR QFH23630 601275 602213 + malate_dehydrogenase D8Z68_03080 QFH23631 602277 603344 - outer_membrane-stress_sensor_serine endopeptidase DegS D8Z68_03085 QFH23632 603434 604801 - serine_endoprotease_DegQ degQ QFH23633 604955 605353 - DUF1043_family_protein D8Z68_03095 QFH23634 605547 606674 + cell_division_protein_ZapE zapE QFH23635 606893 607321 + 50S_ribosomal_protein_L13 D8Z68_03105 QFH23636 607337 607729 + 30S_ribosomal_protein_S9 D8Z68_03110 QFH23637 607647 607868 - hypothetical_protein D8Z68_03115 QFH23638 608124 608762 + stringent_starvation_protein_A D8Z68_03120 QFH23639 608768 609265 + stringent_starvation_protein_B D8Z68_03125 QFH23640 609300 610664 - C4-dicarboxylate_transporter_DcuC dcuC QFH23641 611044 611835 + transcriptional_regulator_NanR D8Z68_03135 QFH23642 611957 612850 + N-acetylneuraminate_lyase nanA QFH23643 612959 614449 + MFS_transporter D8Z68_03145 QFH23644 614497 615186 + N-acetylmannosamine-6-phosphate_2-epimerase D8Z68_03150 QFH23645 615183 616058 + ROK_family_protein D8Z68_03155 QFH23646 616055 616519 + YhcH/YjgK/YiaL_family_protein D8Z68_03160 D8Z68_03165 616579 617626 - DUF1016_domain-containing_protein no_locus_tag QFH23647 617810 619228 - glutamate_synthase_small_subunit D8Z68_03170 QFH23648 619241 623701 - glutamate_synthase_large_subunit D8Z68_03175 QFH28196 624375 625304 + TIGR01212_family_radical_SAM_protein D8Z68_03180 QFH23649 625400 627736 + hybrid_sensor_histidine_kinase/response regulator D8Z68_03185 QFH23650 627966 628619 + isoprenoid_biosynthesis_protein_ElbB elbB QFH23651 628616 629344 + monofunctional_biosynthetic_peptidoglycan transglycosylase D8Z68_03195 QFH23652 629341 629973 - PhoP_regulatory_network_protein_YrbL yrbL QFH23653 630187 630459 - phosphocarrier_protein_NPr D8Z68_03205 QFH23654 630456 631310 - RNase_adaptor_protein_RapZ D8Z68_03210 QFH23655 631356 631847 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFH23656 631965 632252 - ribosome_hibernation_promoting_factor D8Z68_03220 QFH23657 632275 633708 - RNA_polymerase_sigma-54_factor D8Z68_03225 QFH23658 633756 634481 - ABC_transporter_ATP-binding_protein D8Z68_03230 QFH23659 634488 635045 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFH23660 635014 635589 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFH23661 635586 636152 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC D8Z68_03245 QFH23662 636173 637159 - arabinose_5-phosphate_isomerase_KdsD D8Z68_03250 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QFH23646 100 318 100.0 6e-109 PJR32596.1 QFH23645 100 570 100.0 0.0 PJR32597.1 QFH23644 100 461 100.0 2e-162 PJR32598.1 QFH23643 100 993 100.0 0.0 PJR32600.1 QFH23641 100 537 100.0 0.0 >> 204. CP032803_0 Source: Escherichia coli strain ERL05-1306 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2879 Table of genes, locations, strands and annotations of subject cluster: QFH12903 593514 594959 + metalloprotease_TldD tldD QFH12904 595093 596022 - HTH-type_transcriptional_activator_AaeR aaeR QFH12905 596205 596408 + DUF1656_domain-containing_protein D8Z70_03050 QFH12906 596416 597345 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFH12907 597351 599318 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFH12908 599410 599682 + hypothetical_protein D8Z70_03065 QFH12909 599738 600001 - DUF1471_domain-containing_protein D8Z70_03070 QFH12910 600366 600836 - transcriptional_regulator_ArgR argR QFH12911 601271 602209 + malate_dehydrogenase D8Z70_03080 QFH12912 602273 603340 - outer_membrane-stress_sensor_serine endopeptidase DegS D8Z70_03085 QFH12913 603430 604797 - serine_endoprotease_DegQ degQ QFH12914 604951 605349 - DUF1043_family_protein D8Z70_03095 QFH12915 605543 606670 + cell_division_protein_ZapE zapE QFH12916 606889 607317 + 50S_ribosomal_protein_L13 D8Z70_03105 QFH12917 607333 607725 + 30S_ribosomal_protein_S9 D8Z70_03110 QFH12918 607643 607864 - hypothetical_protein D8Z70_03115 QFH12919 608120 608758 + stringent_starvation_protein_A D8Z70_03120 QFH12920 608764 609261 + stringent_starvation_protein_B D8Z70_03125 QFH12921 609296 610660 - C4-dicarboxylate_transporter_DcuC dcuC QFH12922 611040 611831 + transcriptional_regulator_NanR D8Z70_03135 QFH12923 611953 612846 + N-acetylneuraminate_lyase nanA QFH12924 612955 614445 + MFS_transporter D8Z70_03145 QFH12925 614493 615182 + N-acetylmannosamine-6-phosphate_2-epimerase D8Z70_03150 QFH12926 615179 616054 + ROK_family_protein D8Z70_03155 QFH12927 616051 616515 + YhcH/YjgK/YiaL_family_protein D8Z70_03160 D8Z70_03165 616575 617622 - DUF1016_domain-containing_protein no_locus_tag QFH12928 617806 619224 - glutamate_synthase_small_subunit D8Z70_03170 QFH12929 619237 623697 - glutamate_synthase_large_subunit D8Z70_03175 QFH17475 624371 625300 + TIGR01212_family_radical_SAM_protein D8Z70_03180 QFH12930 625396 627732 + hybrid_sensor_histidine_kinase/response regulator D8Z70_03185 QFH12931 627962 628615 + isoprenoid_biosynthesis_protein_ElbB elbB QFH12932 628612 629340 + monofunctional_biosynthetic_peptidoglycan transglycosylase D8Z70_03195 QFH12933 629337 629969 - PhoP_regulatory_network_protein_YrbL yrbL QFH12934 630183 630455 - phosphocarrier_protein_NPr D8Z70_03205 QFH12935 630452 631306 - RNase_adaptor_protein_RapZ D8Z70_03210 QFH12936 631352 631843 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFH12937 631961 632248 - ribosome_hibernation_promoting_factor D8Z70_03220 QFH12938 632271 633704 - RNA_polymerase_sigma-54_factor D8Z70_03225 QFH12939 633752 634477 - ABC_transporter_ATP-binding_protein D8Z70_03230 QFH12940 634484 635041 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFH12941 635010 635585 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFH12942 635582 636148 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC D8Z70_03245 QFH12943 636169 637155 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QFH12927 100 318 100.0 6e-109 PJR32596.1 QFH12926 100 570 100.0 0.0 PJR32597.1 QFH12925 100 461 100.0 2e-162 PJR32598.1 QFH12924 100 993 100.0 0.0 PJR32600.1 QFH12922 100 537 100.0 0.0 >> 205. CP032793_0 Source: Escherichia coli strain NZRM3614 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2879 Table of genes, locations, strands and annotations of subject cluster: QFG91263 592208 593653 + metalloprotease_TldD tldD QFG91264 593787 594716 - HTH-type_transcriptional_activator_AaeR aaeR QFG91265 594899 595102 + DUF1656_domain-containing_protein D8Z74_03045 QFG91266 595110 596039 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFG91267 596045 598012 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFG91268 598104 598376 + hypothetical_protein D8Z74_03060 QFG91269 598432 598695 - DUF1471_domain-containing_protein D8Z74_03065 QFG91270 599060 599530 - transcriptional_regulator_ArgR argR QFG91271 599965 600903 + malate_dehydrogenase D8Z74_03075 QFG91272 600967 602034 - outer_membrane-stress_sensor_serine endopeptidase DegS D8Z74_03080 QFG91273 602124 603491 - serine_endoprotease_DegQ degQ QFG91274 603645 604043 - DUF1043_family_protein D8Z74_03090 QFG91275 604237 605364 + cell_division_protein_ZapE zapE QFG91276 605583 606011 + 50S_ribosomal_protein_L13 D8Z74_03100 QFG91277 606027 606419 + 30S_ribosomal_protein_S9 D8Z74_03105 QFG91278 606337 606558 - hypothetical_protein D8Z74_03110 QFG91279 606814 607452 + stringent_starvation_protein_A D8Z74_03115 QFG91280 607458 607955 + stringent_starvation_protein_B D8Z74_03120 QFG91281 607990 609354 - C4-dicarboxylate_transporter_DcuC dcuC QFG91282 609734 610525 + transcriptional_regulator_NanR D8Z74_03130 QFG91283 610647 611540 + N-acetylneuraminate_lyase nanA QFG91284 611649 613139 + MFS_transporter D8Z74_03140 QFG91285 613187 613876 + N-acetylmannosamine-6-phosphate_2-epimerase D8Z74_03145 QFG91286 613873 614748 + ROK_family_protein D8Z74_03150 QFG91287 614745 615209 + YhcH/YjgK/YiaL_family_protein D8Z74_03155 D8Z74_03160 615269 616316 - DUF1016_domain-containing_protein no_locus_tag QFG91288 616500 617918 - glutamate_synthase_small_subunit D8Z74_03165 QFG91289 617931 622391 - glutamate_synthase_large_subunit D8Z74_03170 QFG95659 623065 623994 + TIGR01212_family_radical_SAM_protein D8Z74_03175 QFG91290 624090 626426 + hybrid_sensor_histidine_kinase/response regulator D8Z74_03180 QFG91291 626656 627309 + isoprenoid_biosynthesis_protein_ElbB elbB QFG91292 627306 628034 + monofunctional_biosynthetic_peptidoglycan transglycosylase D8Z74_03190 QFG91293 628031 628663 - PhoP_regulatory_network_protein_YrbL yrbL QFG91294 628877 629149 - phosphocarrier_protein_NPr D8Z74_03200 QFG91295 629146 630000 - RNase_adaptor_protein_RapZ D8Z74_03205 QFG91296 630046 630537 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFG91297 630655 630942 - ribosome_hibernation_promoting_factor D8Z74_03215 QFG91298 630965 632398 - RNA_polymerase_factor_sigma-54 D8Z74_03220 QFG91299 632446 633171 - ABC_transporter_ATP-binding_protein D8Z74_03225 QFG91300 633178 633735 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFG91301 633704 634279 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFG91302 634276 634842 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC D8Z74_03240 QFG91303 634863 635849 - arabinose_5-phosphate_isomerase_KdsD D8Z74_03245 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QFG91287 100 318 100.0 6e-109 PJR32596.1 QFG91286 100 570 100.0 0.0 PJR32597.1 QFG91285 100 461 100.0 2e-162 PJR32598.1 QFG91284 100 993 100.0 0.0 PJR32600.1 QFG91282 100 537 100.0 0.0 >> 206. CP032791_0 Source: Escherichia coli strain NZRM4165 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2879 Table of genes, locations, strands and annotations of subject cluster: QFG86001 593514 594959 + metalloprotease_TldD tldD QFG86002 595093 596022 - HTH-type_transcriptional_activator_AaeR aaeR QFG86003 596205 596408 + DUF1656_domain-containing_protein D8Z75_03055 QFG86004 596416 597345 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFG86005 597351 599318 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFG86006 599410 599682 + hypothetical_protein D8Z75_03070 QFG86007 599738 600001 - DUF1471_domain-containing_protein D8Z75_03075 QFG86008 600366 600836 - transcriptional_regulator_ArgR argR QFG86009 601271 602209 + malate_dehydrogenase D8Z75_03085 QFG86010 602273 603340 - outer_membrane-stress_sensor_serine endopeptidase DegS D8Z75_03090 QFG86011 603430 604797 - serine_endoprotease_DegQ degQ QFG86012 604951 605349 - DUF1043_family_protein D8Z75_03100 QFG86013 605543 606670 + cell_division_protein_ZapE zapE QFG86014 606889 607317 + 50S_ribosomal_protein_L13 D8Z75_03110 QFG86015 607333 607725 + 30S_ribosomal_protein_S9 D8Z75_03115 QFG86016 607643 607864 - hypothetical_protein D8Z75_03120 QFG86017 608120 608758 + stringent_starvation_protein_A D8Z75_03125 QFG86018 608764 609261 + stringent_starvation_protein_B D8Z75_03130 QFG86019 609296 610660 - C4-dicarboxylate_transporter_DcuC dcuC QFG86020 611040 611831 + transcriptional_regulator_NanR D8Z75_03140 QFG86021 611953 612846 + N-acetylneuraminate_lyase nanA QFG86022 612955 614445 + MFS_transporter D8Z75_03150 QFG86023 614493 615182 + N-acetylmannosamine-6-phosphate_2-epimerase D8Z75_03155 QFG86024 615179 616054 + ROK_family_protein D8Z75_03160 QFG86025 616051 616515 + YhcH/YjgK/YiaL_family_protein D8Z75_03165 D8Z75_03170 616575 617622 - DUF1016_domain-containing_protein no_locus_tag QFG86026 617806 619224 - glutamate_synthase_small_subunit D8Z75_03175 QFG86027 619237 623697 - glutamate_synthase_large_subunit D8Z75_03180 QFG90410 624371 625300 + TIGR01212_family_radical_SAM_protein D8Z75_03185 QFG86028 625396 627732 + hybrid_sensor_histidine_kinase/response regulator D8Z75_03190 QFG86029 627962 628615 + isoprenoid_biosynthesis_protein_ElbB elbB QFG86030 628612 629340 + monofunctional_biosynthetic_peptidoglycan transglycosylase D8Z75_03200 QFG86031 629337 629969 - PhoP_regulatory_network_protein_YrbL yrbL QFG86032 630183 630455 - phosphocarrier_protein_NPr D8Z75_03210 QFG86033 630452 631306 - RNase_adaptor_protein_RapZ D8Z75_03215 QFG86034 631352 631843 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFG86035 631961 632248 - ribosome_hibernation_promoting_factor D8Z75_03225 QFG86036 632271 633704 - RNA_polymerase_sigma-54_factor D8Z75_03230 QFG86037 633752 634477 - ABC_transporter_ATP-binding_protein D8Z75_03235 QFG86038 634484 635041 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFG86039 635010 635585 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFG86040 635582 636148 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC D8Z75_03250 QFG86041 636169 637155 - arabinose_5-phosphate_isomerase_KdsD D8Z75_03255 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QFG86025 100 318 100.0 6e-109 PJR32596.1 QFG86024 100 570 100.0 0.0 PJR32597.1 QFG86023 100 461 100.0 2e-162 PJR32598.1 QFG86022 100 993 100.0 0.0 PJR32600.1 QFG86020 100 537 100.0 0.0 >> 207. CP032789_0 Source: Escherichia coli strain NZRM4169 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2879 Table of genes, locations, strands and annotations of subject cluster: QFG80590 592210 593655 + metalloprotease_TldD tldD QFG80591 593789 594718 - HTH-type_transcriptional_activator_AaeR aaeR QFG80592 594901 595104 + DUF1656_domain-containing_protein D8Z76_03045 QFG80593 595112 596041 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QFG80594 596047 598014 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QFG80595 598106 598378 + hypothetical_protein D8Z76_03060 QFG80596 598434 598697 - DUF1471_domain-containing_protein D8Z76_03065 QFG80597 599062 599532 - transcriptional_regulator_ArgR argR QFG80598 599967 600905 + malate_dehydrogenase D8Z76_03075 QFG80599 600969 602036 - outer_membrane-stress_sensor_serine endopeptidase DegS D8Z76_03080 QFG80600 602126 603493 - serine_endoprotease_DegQ degQ QFG80601 603647 604045 - DUF1043_family_protein D8Z76_03090 QFG80602 604239 605366 + cell_division_protein_ZapE zapE QFG80603 605585 606013 + 50S_ribosomal_protein_L13 D8Z76_03100 QFG80604 606029 606421 + 30S_ribosomal_protein_S9 D8Z76_03105 QFG80605 606339 606560 - hypothetical_protein D8Z76_03110 QFG80606 606816 607454 + stringent_starvation_protein_A D8Z76_03115 QFG80607 607460 607957 + stringent_starvation_protein_B D8Z76_03120 QFG80608 607992 609356 - C4-dicarboxylate_transporter_DcuC dcuC QFG80609 609736 610527 + transcriptional_regulator_NanR D8Z76_03130 QFG80610 610649 611542 + N-acetylneuraminate_lyase nanA QFG80611 611651 613141 + MFS_transporter D8Z76_03140 QFG80612 613189 613878 + N-acetylmannosamine-6-phosphate_2-epimerase D8Z76_03145 QFG80613 613875 614750 + ROK_family_protein D8Z76_03150 QFG80614 614747 615211 + YhcH/YjgK/YiaL_family_protein D8Z76_03155 D8Z76_03160 615271 616319 - DUF1016_domain-containing_protein no_locus_tag QFG80615 616503 617921 - glutamate_synthase_small_subunit D8Z76_03165 QFG80616 617934 622394 - glutamate_synthase_large_subunit D8Z76_03170 QFG85121 623068 623997 + TIGR01212_family_radical_SAM_protein D8Z76_03175 QFG80617 624093 626429 + hybrid_sensor_histidine_kinase/response regulator D8Z76_03180 QFG80618 626659 627312 + isoprenoid_biosynthesis_protein_ElbB elbB QFG80619 627309 628037 + monofunctional_biosynthetic_peptidoglycan transglycosylase D8Z76_03190 QFG80620 628034 628666 - PhoP_regulatory_network_protein_YrbL yrbL QFG80621 628880 629152 - phosphocarrier_protein_NPr D8Z76_03200 QFG80622 629149 630003 - RNase_adaptor_protein_RapZ D8Z76_03205 QFG80623 630049 630540 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QFG80624 630658 630945 - ribosome_hibernation_promoting_factor D8Z76_03215 QFG80625 630968 632401 - RNA_polymerase_sigma-54_factor D8Z76_03220 QFG80626 632449 633174 - ABC_transporter_ATP-binding_protein D8Z76_03225 QFG80627 633181 633738 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QFG80628 633707 634282 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QFG80629 634279 634845 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC D8Z76_03240 QFG80630 634866 635852 - arabinose_5-phosphate_isomerase_KdsD D8Z76_03245 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QFG80614 100 318 100.0 6e-109 PJR32596.1 QFG80613 100 570 100.0 0.0 PJR32597.1 QFG80612 100 461 100.0 2e-162 PJR32598.1 QFG80611 100 993 100.0 0.0 PJR32600.1 QFG80609 100 537 100.0 0.0 >> 208. AP018488_0 Source: Escherichia coli O157:H7 pv15-279 DNA, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2877 Table of genes, locations, strands and annotations of subject cluster: BBC52347 4185043 4185609 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC BBC52348 4185606 4186181 + periplasmic_membrane-anchored_LPS-binding protein lptC BBC52349 4186150 4186707 + lipopolysaccharide_export_system_protein_LptA lptA BBC52350 4186714 4187439 + lipopolysaccharide_export_ABC_transporter ATPase lptB BBC52351 4187487 4188920 + RNA_polymerase_sigma_54_factor_RpoN rpoN BBC52352 4188943 4189230 + ribosome_hibernation_promoting_factor_HPF hpf BBC52353 4189348 4189839 + sugar-specific_enzyme_IIA_component_of_PTS ptsN BBC52354 4189885 4190739 + nucleotide-binding_protein yhbJ BBC52355 4190736 4191008 + phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system npr BBC52356 4191222 4191854 + Mg(2+)-starvation-stimulated_protein yrbL BBC52357 4191851 4192579 - biosynthetic_peptidoglycan_transglycosylase mtgA BBC52358 4192576 4193229 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB BBC52359 4193459 4195795 - aerobic_respiration_control_sensor_histidine protein kinase arcB BBC52360 4195891 4196820 - Fe-S_oxidoreductase yhcC BBC52361 4197401 4201954 + glutamate_synthase_large_subunit gltB BBC52362 4201967 4203385 + glutamate_synthase_small_subunit gltD BBC52363 4204677 4205141 - hypothetical_protein yhcH BBC52364 4205138 4206013 - N-acetylmannosamine_kinase nanK BBC52365 4206010 4206699 - N-acetylmannosamine-6-P_epimerase nanE BBC52366 4206747 4208237 - sialic_acid_transporter nanT BBC52367 4208346 4209239 - N-acetylneuraminate_lyase nanA BBC52368 4209361 4210152 - sialic_acid-inducible_nan_operon_repressor nanR BBC52369 4210664 4211551 - IS629_transposase_OrfB ECpv15279_4055 BBC52370 4211551 4211877 - transposase ECpv15279_4056 dcuD 4211950 4213212 + transporter,_interapted_by_IS_insertion, pseudogene no_locus_tag BBC52371 4213247 4213744 - ClpXP_protease_specificity_enhancing_factor sspB BBC52372 4213750 4214388 - stringent_starvation_protein_A sspA BBC52373 4214783 4215175 - 30S_ribosomal_subunit_protein_S9 rpsI BBC52374 4215191 4215619 - 50S_ribosomal_subunit_protein_L13 rplM BBC52375 4215838 4216965 - cell_division_protein_ZapE zapE BBC52376 4217159 4217557 + inner_membrane-anchored_protein yhcB BBC52377 4217711 4219078 + serine_endoprotease degQ BBC52378 4219168 4220235 + serine_endoprotease degS BBC52379 4220299 4221237 - malate_dehydrogenase mdh BBC52380 4221672 4222142 + l-arginine-responsive_arginine_metabolism regulon transcriptional regulator argR BBC52381 4222507 4222770 + cadmium_and_peroxide_resistance_protein yhcN BBC52382 4222826 4223098 - barnase_inhibitor yhcO BBC52383 4223190 4225157 - p-hydroxybenzoic_acid_efflux_system_component aaeB BBC52384 4225163 4226095 - p-hydroxybenzoic_acid_efflux_system_component aaeA BBC52385 4226103 4226306 - hypothetical_protein yhcR BBC52386 4226489 4227418 + transcriptional_regulator aaeR BBC52387 4227552 4228997 - protease_TldD tldD BBC52388 4229153 4232953 - hypothetical_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 BBC52363 100 318 100.0 6e-109 PJR32596.1 BBC52364 99 568 100.0 0.0 PJR32597.1 BBC52365 100 461 100.0 2e-162 PJR32598.1 BBC52366 100 993 100.0 0.0 PJR32600.1 BBC52368 100 537 100.0 0.0 >> 209. CP043414_0 Source: Escherichia coli strain EC42405 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2713 Table of genes, locations, strands and annotations of subject cluster: QHP97950 598475 599920 + metalloprotease_TldD tldD QHP97951 600048 600977 - HTH-type_transcriptional_activator_AaeR aaeR QHP97952 601160 601363 + DUF1656_domain-containing_protein FZN31_02965 QHP97953 601371 602303 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHP97954 602309 604276 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHP97955 604368 604640 + hypothetical_protein FZN31_02980 QHP97956 604696 604959 - peroxide/acid_stress_response_protein_YhcN yhcN QHP97957 605324 605794 - transcriptional_regulator_ArgR argR QHP97958 606229 607167 + malate_dehydrogenase mdh QHP97959 607230 608297 - serine_endoprotease_DegS FZN31_03000 QHP97960 608387 609754 - serine_endoprotease_DegQ degQ QHP97961 609908 610306 - DUF1043_family_protein FZN31_03010 QHP97962 610500 611627 + cell_division_protein_ZapE FZN31_03015 QHP97963 611846 612274 + 50S_ribosomal_protein_L13 rplM QHP97964 612290 612682 + 30S_ribosomal_protein_S9 rpsI QHP97965 612838 613632 + DUF695_domain-containing_protein FZN31_03030 QHP97966 613902 614540 + stringent_starvation_protein_A sspA QHP97967 614546 615043 + ClpXP_protease_specificity-enhancing_factor sspB QHP97968 615087 616454 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHP97969 616834 617625 + transcriptional_regulator_NanR nanR QHP97970 617747 618640 + N-acetylneuraminate_lyase nanA QHP97971 618749 620239 + sialic_acid_transporter_NanT nanT QHP97972 620286 620975 + N-acetylmannosamine-6-phosphate_2-epimerase FZN31_03065 QHP97973 620972 621847 + N-acetylmannosamine_kinase FZN31_03070 QHP97974 621844 622308 + DUF386_domain-containing_protein FZN31_03075 QHP97975 622368 623495 - DUF1016_domain-containing_protein FZN31_03080 QHP97976 623679 625097 - NAD(P)-binding_protein FZN31_03085 QHQ01894 625110 629570 - glutamate_synthase_large_subunit gltB QHP97977 630245 631174 + TIGR01212_family_radical_SAM_protein FZN31_03095 QHP97978 631270 633606 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHP97979 633836 634489 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHP97980 634486 635214 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHP97981 635211 635843 - PhoP_regulatory_network_protein_YrbL yrbL QHP97982 636056 636328 - PTS_phosphocarrier_protein_NPr npr QHP97983 636325 637179 - RNase_adapter_RapZ rapZ QHP97984 637225 637716 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHP97985 637834 638121 - ribosome_hibernation_promoting_factor FZN31_03135 QHP97986 638144 639577 - RNA_polymerase_factor_sigma-54 rpoN QHP97987 639625 640350 - LPS_export_ABC_transporter_ATP-binding_protein lptB QHP97988 640357 640914 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHP97989 640883 641458 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHP97990 641455 642021 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHP97991 642042 643028 - arabinose-5-phosphate_isomerase_KdsD kdsD QHP97992 643042 644019 - calcium/sodium_antiporter FZN31_03170 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHP97975 91 694 107.449856734 0.0 PJR32595.1 QHP97974 98 311 100.0 7e-106 PJR32596.1 QHP97973 98 560 100.0 0.0 PJR32599.1 QHP97970 100 611 100.0 0.0 PJR32600.1 QHP97969 100 537 100.0 0.0 >> 210. CP021844_0 Source: Escherichia coli strain EC1515 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2581 Table of genes, locations, strands and annotations of subject cluster: ASA64052 532422 533867 + metalloprotease_TldD CDH89_02660 ASA64053 533994 534923 - HTH-type_transcriptional_activator_AaeR CDH89_02665 ASA64054 535106 535309 + protein_AaeX CDH89_02670 ASA64055 535317 536249 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CDH89_02675 ASA64056 536255 538222 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CDH89_02680 ASA64057 538314 538586 + hypothetical_protein CDH89_02685 ASA64058 538642 538905 - hypothetical_protein CDH89_02690 ASA64059 539270 539740 - arginine_repressor CDH89_02695 ASA64060 540175 541113 + malate_dehydrogenase CDH89_02700 ASA64061 541176 542243 - outer_membrane-stress_sensor_serine endopeptidase DegS CDH89_02705 ASA64062 542333 543700 - periplasmic_pH-dependent_serine_endoprotease DegQ CDH89_02710 ASA64063 543854 544252 - hypothetical_protein CDH89_02715 ASA64064 544446 545573 + cell_division_protein_ZapE CDH89_02720 ASA64065 545792 546220 + 50S_ribosomal_protein_L13 CDH89_02725 ASA64066 546236 546628 + 30S_ribosomal_protein_S9 CDH89_02730 ASA64067 546546 546767 - hypothetical_protein CDH89_02735 ASA68235 546741 546920 + hypothetical_protein CDH89_02740 ASA68234 546872 547081 - hypothetical_protein CDH89_02745 ASA64068 547023 547661 + stringent_starvation_protein_A CDH89_02750 ASA64069 547667 548164 + stringent_starvation_protein_B CDH89_02755 ASA64070 548206 549573 - C4-dicarboxylate_transporter CDH89_02760 CDH89_02765 549573 549683 + transposase no_locus_tag ASA64071 549952 550743 + transcriptional_regulator_NanR CDH89_02770 ASA64072 550865 551758 + N-acetylneuraminate_lyase nanA ASA64073 551867 553357 + MFS_transporter CDH89_02780 ASA64074 553405 554094 + N-acetylmannosamine-6-phosphate_2-epimerase CDH89_02785 ASA64075 554091 554966 + N-acetylmannosamine_kinase CDH89_02790 ASA64076 554963 555427 + YhcH/YjgK/YiaL_family_protein CDH89_02795 ASA64077 555487 556614 - hypothetical_protein CDH89_02800 ASA64078 556798 558216 - glutamate_synthase_small_subunit CDH89_02805 ASA64079 558229 562689 - glutamate_synthase CDH89_02810 CDH89_02815 562612 562838 + hypothetical_protein no_locus_tag ASA64080 562736 562972 + hypothetical_protein CDH89_02820 ASA68236 563364 564293 + TIGR01212_family_radical_SAM_protein CDH89_02825 ASA64081 564389 566725 + hybrid_sensor_histidine_kinase/response regulator CDH89_02830 ASA64082 566955 567608 + glutamine_amidotransferase CDH89_02835 ASA64083 567605 568333 + monofunctional_biosynthetic_peptidoglycan transglycosylase CDH89_02840 ASA64084 568330 568962 - hypothetical_protein CDH89_02845 ASA64085 569175 569447 - phosphocarrier_protein_NPr CDH89_02850 ASA64086 569444 570298 - RNase_adaptor_protein_RapZ CDH89_02855 ASA64087 570344 570835 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN CDH89_02860 ASA64088 570953 571240 - ribosome_hibernation_promoting_factor raiA ASA64089 571263 572696 - RNA_polymerase_sigma-54_factor CDH89_02870 ASA64090 572744 573469 - ABC_transporter_ATP-binding_protein lptB ASA64091 573476 574033 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA CDH89_02880 ASA64092 574002 574577 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC ASA64093 574574 575140 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC CDH89_02890 ASA64094 575161 576147 - arabinose_5-phosphate_isomerase_KdsD CDH89_02895 ASA64095 576161 577138 - calcium/sodium_antiporter CDH89_02900 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ASA64077 92 704 107.449856734 0.0 PJR32595.1 ASA64076 99 317 100.0 2e-108 PJR32596.1 ASA64075 98 564 100.0 0.0 PJR32597.1 ASA64074 99 459 100.0 8e-162 PJR32600.1 ASA64071 100 537 100.0 0.0 >> 211. CP021840_0 Source: Escherichia coli strain EC974 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2581 Table of genes, locations, strands and annotations of subject cluster: ASA59166 861543 862529 + arabinose_5-phosphate_isomerase_KdsD CDH88_04395 ASA59167 862550 863116 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC CDH88_04400 ASA59168 863113 863688 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC ASA59169 863657 864214 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA CDH88_04410 ASA59170 864221 864946 + ABC_transporter_ATP-binding_protein lptB ASA59171 864994 866427 + RNA_polymerase_sigma-54_factor CDH88_04420 ASA59172 866450 866737 + ribosome_hibernation_promoting_factor raiA ASA59173 866855 867346 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN CDH88_04430 ASA59174 867392 868246 + RNase_adaptor_protein_RapZ CDH88_04435 ASA59175 868243 868515 + phosphocarrier_protein_NPr CDH88_04440 ASA59176 868728 869360 + hypothetical_protein CDH88_04445 ASA59177 869357 870085 - monofunctional_biosynthetic_peptidoglycan transglycosylase CDH88_04450 ASA59178 870082 870735 - glutamine_amidotransferase CDH88_04455 ASA59179 870965 873301 - hybrid_sensor_histidine_kinase/response regulator CDH88_04460 ASA63087 873397 874326 - TIGR01212_family_radical_SAM_protein CDH88_04465 ASA59180 874718 874954 - hypothetical_protein CDH88_04470 CDH88_04475 874852 875078 - hypothetical_protein no_locus_tag ASA59181 875001 879461 + glutamate_synthase CDH88_04480 ASA59182 879474 880892 + glutamate_synthase_small_subunit CDH88_04485 ASA59183 881076 882203 + hypothetical_protein CDH88_04490 ASA59184 882263 882727 - YhcH/YjgK/YiaL_family_protein CDH88_04495 ASA59185 882724 883599 - N-acetylmannosamine_kinase CDH88_04500 ASA59186 883596 884285 - N-acetylmannosamine-6-phosphate_2-epimerase CDH88_04505 ASA59187 884333 885823 - MFS_transporter CDH88_04510 ASA59188 885932 886825 - N-acetylneuraminate_lyase nanA ASA59189 886947 887738 - transcriptional_regulator_NanR CDH88_04520 CDH88_04525 888007 888117 - transposase no_locus_tag ASA59190 888117 889484 + C4-dicarboxylate_transporter CDH88_04530 ASA59191 889526 890023 - stringent_starvation_protein_B CDH88_04535 ASA59192 890029 890667 - stringent_starvation_protein_A CDH88_04540 ASA59193 890609 890818 + hypothetical_protein CDH88_04545 ASA63088 890770 890949 - hypothetical_protein CDH88_04550 ASA59194 890923 891144 + hypothetical_protein CDH88_04555 ASA59195 891062 891454 - 30S_ribosomal_protein_S9 CDH88_04560 ASA59196 891470 891898 - 50S_ribosomal_protein_L13 CDH88_04565 ASA59197 892117 893244 - cell_division_protein_ZapE CDH88_04570 ASA59198 893438 893836 + hypothetical_protein CDH88_04575 ASA59199 893990 895357 + periplasmic_pH-dependent_serine_endoprotease DegQ CDH88_04580 ASA59200 895447 896514 + outer_membrane-stress_sensor_serine endopeptidase DegS CDH88_04585 ASA59201 896577 897515 - malate_dehydrogenase CDH88_04590 ASA59202 897950 898420 + arginine_repressor CDH88_04595 ASA59203 898785 899048 + hypothetical_protein CDH88_04600 ASA59204 899104 899376 - hypothetical_protein CDH88_04605 ASA59205 899468 901435 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CDH88_04610 ASA59206 901441 902373 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CDH88_04615 ASA59207 902381 902584 - protein_AaeX CDH88_04620 ASA59208 902767 903696 + HTH-type_transcriptional_activator_AaeR CDH88_04625 ASA59209 903823 905268 - metalloprotease_TldD CDH88_04630 ASA59210 905607 909407 - TIGR02099_family_protein CDH88_04635 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ASA59183 92 704 107.449856734 0.0 PJR32595.1 ASA59184 99 317 100.0 2e-108 PJR32596.1 ASA59185 98 564 100.0 0.0 PJR32597.1 ASA59186 99 459 100.0 8e-162 PJR32600.1 ASA59189 100 537 100.0 0.0 >> 212. CP049201_0 Source: Escherichia coli strain PapRG-04-4 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2534 Table of genes, locations, strands and annotations of subject cluster: QIF11872 493546 494991 + metalloprotease_TldD tldD QIF11873 495119 496048 - HTH-type_transcriptional_activator_AaeR aaeR QIF11874 496231 496434 + AaeX_family_protein G6Z99_02380 QIF11875 496442 497374 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QIF11876 497380 499347 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIF11877 499438 499710 + hypothetical_protein G6Z99_02395 QIF11878 499766 500029 - peroxide/acid_stress_response_protein_YhcN yhcN QIF11879 500394 500864 - transcriptional_regulator_ArgR argR QIF11880 501299 502237 + malate_dehydrogenase mdh QIF11881 502300 503367 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QIF11882 503457 504824 - serine_endoprotease_DegQ degQ QIF11883 504978 505376 - DUF1043_family_protein G6Z99_02425 QIF11884 505570 506697 + cell_division_protein_ZapE G6Z99_02430 QIF11885 506916 507344 + 50S_ribosomal_protein_L13 rplM QIF11886 507360 507752 + 30S_ribosomal_protein_S9 rpsI QIF11887 508147 508785 + stringent_starvation_protein_A sspA QIF11888 508791 509288 + ClpXP_protease_specificity-enhancing_factor sspB QIF11889 509330 510697 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIF11890 511077 511868 + transcriptional_regulator_NanR nanR QIF11891 511990 512883 + N-acetylneuraminate_lyase nanA QIF11892 512992 514482 + sialic_acid_transporter_NanT nanT QIF11893 514530 515219 + N-acetylmannosamine-6-phosphate_2-epimerase G6Z99_02475 QIF11894 515216 516091 + N-acetylmannosamine_kinase nanK QIF11895 516088 516552 + DUF386_domain-containing_protein G6Z99_02485 QIF11896 516612 517739 - DUF1016_domain-containing_protein G6Z99_02490 QIF11897 517923 519341 - glutamate_synthase_subunit_GltD gltD QIF16160 519354 523814 - glutamate_synthase_large_subunit gltB QIF11898 524489 525418 + TIGR01212_family_radical_SAM_protein G6Z99_02505 QIF11899 525514 527850 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIF11900 528080 528733 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIF11901 528730 529458 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QIF11902 529455 530087 - PhoP_regulatory_network_protein_YrbL yrbL QIF11903 530301 530573 - PTS_phosphocarrier_protein_NPr npr QIF11904 530570 531424 - RNase_adapter_RapZ rapZ QIF11905 531470 531961 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QIF11906 532079 532366 - ribosome_hibernation_promoting_factor hpf QIF11907 532389 533822 - RNA_polymerase_factor_sigma-54 rpoN QIF11908 533870 534595 - LPS_export_ABC_transporter_ATP-binding_protein lptB QIF11909 534602 535159 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QIF11910 535128 535703 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QIF11911 535700 536266 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QIF11912 536287 537273 - arabinose-5-phosphate_isomerase_KdsD kdsD QIF11913 537287 538264 - calcium/sodium_antiporter G6Z99_02580 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QIF11896 92 707 107.449856734 0.0 PJR32595.1 QIF11895 100 318 100.0 6e-109 PJR32596.1 QIF11894 97 511 100.0 3e-180 PJR32597.1 QIF11893 100 461 100.0 2e-162 PJR32600.1 QIF11890 100 537 100.0 0.0 >> 213. LR134222_0 Source: Escherichia coli strain NCTC11129 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2511 Table of genes, locations, strands and annotations of subject cluster: VEC42001 482476 483921 + TldD_protein tldD VEC42002 484049 484978 - LysR_family_transcriptional_regulator aaeR VEC42003 485161 485364 + protein_AaeX aaeX VEC42004 485372 486304 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VEC42005 486310 488277 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VEC42006 488369 488641 + barnase_inhibitor yhcO VEC42007 488697 488960 - protein_YcfR ycfR VEC42008 489325 489795 - arginine_repressor argR VEC42009 490230 491168 + malate_dehydrogenase mdh VEC42010 491230 492297 - protease degS VEC42011 492387 493754 - serine_endoprotease degQ VEC42012 493908 494306 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VEC42013 494500 495627 + putative_ATP/GTP-binding_protein yhcM VEC42014 495846 496274 + 50S_ribosomal_protein_L13 rplM VEC42015 496290 496682 + 30S_ribosomal_protein_S9 rpsI VEC42016 497077 497715 + stringent_starvation_protein_A sspA VEC42017 497721 498218 + stringent_starvation_protein_B sspB VEC42018 498261 499628 - C4-dicarboxylate_transporter dcuD VEC42019 500008 500799 + GntR_family_transcriptional_regulator nanR VEC42020 500921 501814 + N-acetylneuraminate_lyase nanA VEC42021 501923 503413 + sialic_acid_transporter nanT VEC42022 503461 504150 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VEC42023 504147 505022 + putative_transcriptional_regulator nanK VEC42024 505019 505483 + beta-galactosidase yhcH VEC42025 505543 506670 - protein yhcG VEC42026 506854 508272 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VEC42027 508285 512838 - glutamate_synthase_subunit_alpha gltB VEC42028 513420 514349 + putative_radical_SAM_protein NCTC11129_00497 VEC42029 514445 516781 + aerobic_respiration_control_protein arcB_1 VEC42030 517011 517664 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VEC42031 517661 518389 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VEC42032 518386 519018 - protein yrbL VEC42033 519231 519503 - phosphocarrier_protein ptsO VEC42034 519500 520354 - putative_ATPase yhbJ VEC42035 520400 520891 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN VEC42036 521009 521296 - putative_sigma(54)_modulation_protein yhbH VEC42037 521319 522752 - RNA_polymerase_sigma-54_factor_(sigma-N) rpoN VEC42038 522800 523525 - lipopolysaccharide_ABC_transporter lptB_1 VEC42039 523532 524089 - lipopolysaccharide_transport_periplasmic_protein LptA yhbN VEC42040 524058 524633 - putative_organic_solvent_tolerance_protein lptC VEC42041 524630 525196 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC VEC42042 525217 526203 - D-arabinose_5-phosphate_isomerase kdsD VEC42043 526217 527194 - calcium/sodium:proton_antiporter yrbG Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VEC42025 91 698 107.449856734 0.0 PJR32595.1 VEC42024 98 311 100.0 7e-106 PJR32596.1 VEC42023 97 510 100.0 6e-180 PJR32597.1 VEC42022 99 456 100.0 1e-160 PJR32600.1 VEC42019 99 536 100.0 0.0 >> 214. CP043744_0 Source: Escherichia coli strain CVM N16EC0879 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2511 Table of genes, locations, strands and annotations of subject cluster: QEP73517 497549 498994 + metalloprotease_TldD tldD QEP73518 499122 500051 - HTH-type_transcriptional_activator_AaeR aaeR QEP73519 500234 500437 + DUF1656_domain-containing_protein F1L21_02455 QEP73520 500445 501377 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QEP73521 501383 503350 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QEP73522 503442 503714 + hypothetical_protein F1L21_02470 QEP73523 503770 504033 - peroxide/acid_stress_response_protein_YhcN yhcN QEP73524 504398 504868 - transcriptional_regulator_ArgR argR QEP73525 505303 506241 + malate_dehydrogenase mdh QEP73526 506303 507370 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QEP73527 507460 508827 - serine_endoprotease_DegQ degQ QEP73528 508981 509379 - DUF1043_family_protein F1L21_02500 QEP73529 509573 510700 + cell_division_protein_ZapE F1L21_02505 QEP73530 510919 511347 + 50S_ribosomal_protein_L13 rplM QEP73531 511363 511755 + 30S_ribosomal_protein_S9 rpsI QEP73532 511673 511894 - hypothetical_protein F1L21_02520 QEP73533 512150 512788 + stringent_starvation_protein_A sspA QEP73534 512794 513291 + ClpXP_protease_specificity-enhancing_factor sspB QEP73535 513334 514701 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QEP73536 515081 515872 + transcriptional_regulator_NanR nanR QEP73537 515994 516887 + N-acetylneuraminate_lyase nanA QEP73538 516996 518486 + sialic_acid_transporter_NanT nanT QEP73539 518534 519223 + N-acetylmannosamine-6-phosphate_2-epimerase F1L21_02555 QEP73540 519220 520095 + N-acetylmannosamine_kinase F1L21_02560 QEP73541 520092 520556 + DUF386_domain-containing_protein F1L21_02565 QEP73542 520616 521743 - DUF1016_domain-containing_protein F1L21_02570 QEP73543 521927 523345 - glutamate_synthase F1L21_02575 QEP77394 523358 527818 - glutamate_synthase_large_subunit gltB QEP73544 528493 529422 + TIGR01212_family_radical_SAM_protein F1L21_02585 QEP73545 529518 531854 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QEP73546 532084 532737 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QEP73547 532734 533462 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QEP73548 533459 534091 - PhoP_regulatory_network_protein_YrbL yrbL QEP73549 534304 534576 - PTS_phosphocarrier_protein_NPr npr QEP73550 534573 535427 - RNase_adapter_RapZ rapZ QEP73551 535473 535964 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QEP73552 536082 536369 - ribosome_hibernation_promoting_factor F1L21_02625 QEP73553 536392 537825 - RNA_polymerase_factor_sigma-54 rpoN QEP73554 537873 538598 - LPS_export_ABC_transporter_ATP-binding_protein lptB QEP73555 538605 539162 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QEP73556 539131 539706 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QEP73557 539703 540269 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QEP73558 540290 541276 - arabinose-5-phosphate_isomerase_KdsD kdsD QEP73559 541290 542267 - calcium/sodium_antiporter F1L21_02660 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QEP73542 91 698 107.449856734 0.0 PJR32595.1 QEP73541 98 311 100.0 7e-106 PJR32596.1 QEP73540 97 510 100.0 6e-180 PJR32597.1 QEP73539 99 456 100.0 1e-160 PJR32600.1 QEP73536 99 536 100.0 0.0 >> 215. CP043478_0 Source: Escherichia coli strain ST130 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2511 Table of genes, locations, strands and annotations of subject cluster: QEM52561 4426642 4427628 + arabinose-5-phosphate_isomerase_KdsD kdsD QEM52562 4427649 4428215 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QEM52563 4428212 4428787 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QEM52564 4428756 4429313 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QEM52565 4429320 4430045 + LPS_export_ABC_transporter_ATP-binding_protein lptB QEM52566 4430093 4431526 + RNA_polymerase_factor_sigma-54 rpoN QEM52567 4431549 4431836 + ribosome_hibernation_promoting_factor FZ043_22095 QEM52568 4431954 4432445 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QEM52569 4432491 4433345 + RNase_adapter_RapZ rapZ QEM52570 4433342 4433614 + PTS_phosphocarrier_protein_NPr npr QEM52571 4433827 4434459 + PhoP_regulatory_network_protein_YrbL yrbL QEM52572 4434456 4435184 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QEM52573 4435181 4435834 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QEM52574 4436064 4438400 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QEM52575 4438496 4439425 - TIGR01212_family_radical_SAM_protein FZ043_22135 QEM53363 4440100 4444560 + glutamate_synthase_large_subunit gltB QEM52576 4444573 4445991 + glutamate_synthase FZ043_22145 QEM52577 4446175 4447302 + DUF1016_domain-containing_protein FZ043_22150 QEM52578 4447362 4447826 - DUF386_domain-containing_protein FZ043_22155 QEM52579 4447823 4448698 - N-acetylmannosamine_kinase FZ043_22160 QEM52580 4448695 4449384 - N-acetylmannosamine-6-phosphate_2-epimerase FZ043_22165 QEM52581 4449432 4450922 - sialic_acid_transporter_NanT nanT QEM52582 4451031 4451924 - N-acetylneuraminate_lyase nanA QEM52583 4452046 4452837 - transcriptional_regulator_NanR nanR QEM52584 4453217 4454584 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QEM52585 4454627 4455124 - ClpXP_protease_specificity-enhancing_factor sspB QEM52586 4455130 4455768 - stringent_starvation_protein_A sspA QEM52587 4456024 4456245 + hypothetical_protein FZ043_22200 QEM52588 4456163 4456555 - 30S_ribosomal_protein_S9 rpsI QEM52589 4456571 4456999 - 50S_ribosomal_protein_L13 rplM QEM52590 4457218 4458345 - cell_division_protein_ZapE FZ043_22215 QEM52591 4458539 4458937 + DUF1043_family_protein FZ043_22220 QEM52592 4459091 4460458 + serine_endoprotease_DegQ degQ QEM52593 4460548 4461615 + outer_membrane-stress_sensor_serine endopeptidase DegS degS QEM52594 4461677 4462615 - malate_dehydrogenase mdh QEM52595 4463050 4463520 + transcriptional_regulator_ArgR argR QEM52596 4463885 4464148 + peroxide/acid_stress_response_protein_YhcN yhcN QEM52597 4464204 4464476 - hypothetical_protein FZ043_22250 QEM52598 4464568 4466535 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QEM52599 4466541 4467473 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QEM52600 4467481 4467684 - DUF1656_domain-containing_protein FZ043_22265 QEM52601 4467867 4468796 + HTH-type_transcriptional_activator_AaeR aaeR QEM52602 4468924 4470369 - metalloprotease_TldD tldD QEM52603 4470525 4474325 - AsmA2_domain-containing_protein FZ043_22280 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QEM52577 91 698 107.449856734 0.0 PJR32595.1 QEM52578 98 311 100.0 7e-106 PJR32596.1 QEM52579 97 510 100.0 6e-180 PJR32597.1 QEM52580 99 456 100.0 1e-160 PJR32600.1 QEM52583 99 536 100.0 0.0 >> 216. CP028381_0 Source: Escherichia coli strain RM10466 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2511 Table of genes, locations, strands and annotations of subject cluster: AWN70729 3767071 3768057 + arabinose_5-phosphate_isomerase_KdsD C7R96_19940 AWN70730 3768078 3768644 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC AWN70731 3768641 3769216 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AWN70732 3769185 3769742 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA C7R96_19955 AWN70733 3769749 3770474 + ABC_transporter_ATP-binding_protein C7R96_19960 AWN70734 3770522 3771955 + RNA_polymerase_sigma-54_factor C7R96_19965 AWN70735 3771978 3772265 + ribosome_hibernation_promoting_factor C7R96_19970 AWN70736 3772383 3772874 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN C7R96_19975 AWN70737 3772920 3773774 + RNase_adaptor_protein_RapZ C7R96_19980 AWN70738 3773771 3774043 + phosphocarrier_protein_NPr C7R96_19985 AWN70739 3774256 3774888 + protein_YrbL yrbL AWN70740 3774885 3775613 - monofunctional_biosynthetic_peptidoglycan transglycosylase C7R96_19995 AWN70741 3775610 3776263 - glutamine_amidotransferase C7R96_20000 AWN70742 3776493 3778829 - aerobic_respiration_two-component_sensor histidine kinase ArcB C7R96_20005 AWN72070 3778880 3779854 - TIGR01212_family_radical_SAM_protein C7R96_20010 AWN70743 3780246 3780482 - hypothetical_protein C7R96_20015 C7R96_20020 3780380 3780606 - hypothetical_protein no_locus_tag AWN70744 3780529 3784989 + glutamate_synthase_large_subunit C7R96_20025 AWN70745 3785002 3786420 + glutamate_synthase C7R96_20030 AWN70746 3786604 3787731 + DUF1016_domain-containing_protein C7R96_20035 AWN70747 3787791 3788255 - YhcH/YjgK/YiaL_family_protein C7R96_20040 AWN70748 3788252 3789127 - N-acetylmannosamine_kinase C7R96_20045 AWN70749 3789124 3789813 - N-acetylmannosamine-6-phosphate_2-epimerase C7R96_20050 AWN70750 3789861 3791351 - MFS_transporter C7R96_20055 AWN70751 3791460 3792353 - N-acetylneuraminate_lyase nanA AWN70752 3792475 3793266 - transcriptional_regulator_NanR nanR C7R96_20070 3793536 3793646 - transposase no_locus_tag AWN70753 3793646 3795013 + C4-dicarboxylate_transporter C7R96_20075 AWN70754 3795056 3795553 - stringent_starvation_protein_B C7R96_20080 AWN70755 3795559 3796197 - stringent_starvation_protein_A C7R96_20085 AWN70756 3796139 3796348 + hypothetical_protein C7R96_20090 AWN72071 3796300 3796479 - hypothetical_protein C7R96_20095 AWN70757 3796453 3796674 + hypothetical_protein C7R96_20100 AWN70758 3796592 3796984 - 30S_ribosomal_protein_S9 C7R96_20105 AWN70759 3797000 3797428 - 50S_ribosomal_protein_L13 C7R96_20110 AWN70760 3797647 3798774 - cell_division_protein_ZapE C7R96_20115 AWN70761 3798968 3799366 + hypothetical_protein C7R96_20120 AWN70762 3799520 3800887 + periplasmic_pH-dependent_serine_endoprotease DegQ C7R96_20125 AWN70763 3800977 3802044 + serine_endoprotease_DegS C7R96_20130 AWN70764 3802106 3803044 - malate_dehydrogenase C7R96_20135 AWN70765 3803479 3803949 + arginine_repressor C7R96_20140 AWN70766 3804314 3804577 + DUF1471_domain-containing_protein C7R96_20145 AWN70767 3804633 3804905 - hypothetical_protein C7R96_20150 AWN70768 3804997 3806964 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C7R96_20155 AWN70769 3806970 3807902 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C7R96_20160 AWN70770 3807910 3808113 - protein_AaeX C7R96_20165 AWN70771 3808296 3809225 + HTH-type_transcriptional_activator_AaeR C7R96_20170 AWN70772 3809353 3810798 - metalloprotease_TldD C7R96_20175 AWN70773 3810954 3814754 - AsmA2_domain-containing_protein C7R96_20180 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AWN70746 91 698 107.449856734 0.0 PJR32595.1 AWN70747 98 311 100.0 7e-106 PJR32596.1 AWN70748 97 510 100.0 6e-180 PJR32597.1 AWN70749 99 456 100.0 1e-160 PJR32600.1 AWN70752 99 536 100.0 0.0 >> 217. CP026939_0 Source: Escherichia coli strain CFS3313 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2511 Table of genes, locations, strands and annotations of subject cluster: QHF82219 546340 547785 + metalloprotease_TldD C5F74_02845 QHF82220 547913 548842 - HTH-type_transcriptional_activator_AaeR C5F74_02850 QHF82221 549025 549228 + protein_AaeX C5F74_02855 QHF82222 549236 550168 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C5F74_02860 QHF82223 550174 552141 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C5F74_02865 QHF82224 552233 552505 + hypothetical_protein C5F74_02870 QHF82225 552561 552824 - DUF1471_domain-containing_protein C5F74_02875 QHF82226 553189 553659 - arginine_repressor C5F74_02880 QHF82227 554094 555032 + malate_dehydrogenase C5F74_02885 QHF82228 555094 556161 - serine_endoprotease_DegS C5F74_02890 QHF82229 556251 557618 - periplasmic_pH-dependent_serine_endoprotease DegQ C5F74_02895 QHF82230 557772 558170 - hypothetical_protein C5F74_02900 QHF82231 558364 559491 + cell_division_protein_ZapE C5F74_02905 QHF82232 559710 560138 + 50S_ribosomal_protein_L13 C5F74_02910 QHF82233 560154 560546 + 30S_ribosomal_protein_S9 C5F74_02915 QHF82234 560464 560685 - hypothetical_protein C5F74_02920 QHF86218 560659 560838 + hypothetical_protein C5F74_02925 QHF86217 560790 560999 - hypothetical_protein C5F74_02930 QHF82235 560941 561579 + stringent_starvation_protein_A C5F74_02935 QHF82236 561585 562082 + ClpXP_protease_specificity-enhancing_factor C5F74_02940 QHF82237 562125 563492 - C4-dicarboxylate_transporter C5F74_02945 C5F74_02950 563492 563602 + transposase no_locus_tag QHF82238 563872 564663 + transcriptional_regulator_NanR nanR QHF82239 564785 565678 + N-acetylneuraminate_lyase nanA QHF82240 565787 567277 + MFS_transporter C5F74_02965 QHF82241 567325 568014 + N-acetylmannosamine-6-phosphate_2-epimerase C5F74_02970 QHF82242 568011 568886 + N-acetylmannosamine_kinase C5F74_02975 QHF82243 568883 569347 + YhcH/YjgK/YiaL_family_protein C5F74_02980 QHF82244 569407 570534 - DUF1016_domain-containing_protein C5F74_02985 QHF82245 570718 572136 - glutamate_synthase C5F74_02990 QHF82246 572149 576609 - glutamate_synthase_large_subunit C5F74_02995 C5F74_03000 576532 576758 + hypothetical_protein no_locus_tag QHF82247 576656 576892 + hypothetical_protein C5F74_03005 QHF86219 577284 578213 + TIGR01212_family_radical_SAM_protein C5F74_03010 QHF82248 578309 580645 + hybrid_sensor_histidine_kinase/response regulator C5F74_03015 QHF82249 580875 581528 + glutamine_amidotransferase C5F74_03020 QHF82250 581525 582253 + monofunctional_biosynthetic_peptidoglycan transglycosylase C5F74_03025 QHF82251 582250 582882 - protein_YrbL yrbL QHF82252 583095 583367 - phosphocarrier_protein_NPr C5F74_03035 QHF82253 583364 584218 - RNase_adapter_RapZ C5F74_03040 QHF82254 584264 584755 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C5F74_03045 QHF82255 584873 585160 - ribosome_hibernation_promoting_factor C5F74_03050 QHF82256 585183 586616 - RNA_polymerase_sigma-54_factor C5F74_03055 QHF82257 586664 587389 - ABC_transporter_ATP-binding_protein C5F74_03060 QHF82258 587396 587953 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C5F74_03065 QHF82259 587922 588497 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHF82260 588494 589060 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QHF82261 589081 590067 - arabinose_5-phosphate_isomerase_KdsD C5F74_03080 QHF82262 590081 591058 - calcium/sodium_antiporter C5F74_03085 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHF82244 91 698 107.449856734 0.0 PJR32595.1 QHF82243 98 311 100.0 7e-106 PJR32596.1 QHF82242 97 510 100.0 6e-180 PJR32597.1 QHF82241 99 456 100.0 1e-160 PJR32600.1 QHF82238 99 536 100.0 0.0 >> 218. CP010145_0 Source: Escherichia coli strain D5, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.5 Cumulative Blast bit score: 2511 Table of genes, locations, strands and annotations of subject cluster: APK20885 2736215 2737201 + D-arabinose_5-phosphate_isomerase RG38_13580 APK20886 2737222 2737788 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG38_13585 APK20887 2737785 2738360 + lipopolysaccharide_transporter RG38_13590 APK20888 2738329 2738886 + lipopolysaccharide_transporter RG38_13595 APK20889 2738893 2739618 + sugar_ABC_transporter_ATP-binding_protein RG38_13600 APK20890 2739666 2741099 + RNA_polymerase_factor_sigma-54 RG38_13605 APK20891 2741122 2741409 + ribosome_hibernation_promoting_factor_HPF RG38_13610 APK20892 2742063 2742917 + glmZ(sRNA)-inactivating_NTPase RG38_13620 APK20893 2742914 2743186 + phosphohistidinoprotein-hexose phosphotransferase RG38_13625 APK20894 2743399 2744031 + hypothetical_protein RG38_13630 APK20895 2744028 2744756 - peptidoglycan_transglycosylase mtgA APK20896 2744753 2745406 - isoprenoid_biosynthesis_protein RG38_13640 APK20897 2745636 2747972 - aerobic_respiration_control_sensor_protein_ArcB RG38_13645 APK22893 2748068 2748997 - hypothetical_protein RG38_13650 APK22894 2749672 2754132 + glutamate_synthase gltB APK20898 2754145 2755563 + glutamate_synthase RG38_13660 APK20899 2755747 2756874 + hypothetical_protein RG38_13665 APK20900 2756934 2757398 - hypothetical_protein RG38_13670 APK20901 2757395 2758270 - N-acetylmannosamine_kinase RG38_13675 APK20902 2758267 2758956 - N-acetylmannosamine-6-phosphate_2-epimerase RG38_13680 APK20903 2759004 2760494 - sialic_acid_transporter RG38_13685 APK20904 2760603 2761496 - N-acetylneuraminate_lyase RG38_13690 APK20905 2761618 2762409 - transcriptional_regulator_NanR RG38_13695 APK20906 2762789 2764156 + C4-dicarboxylate_transporter RG38_13700 APK20907 2764199 2764696 - Clp_protease_ClpP RG38_13705 APK20908 2764702 2765340 - stringent_starvation_protein_A sspA APK20909 2765735 2766127 - 30S_ribosomal_protein_S9 RG38_13715 APK20910 2766143 2766571 - 50S_ribosomal_protein_L13 RG38_13720 APK20911 2766790 2767917 - hypothetical_protein RG38_13725 APK20912 2768111 2768509 + hypothetical_protein RG38_13730 APK20913 2768663 2770030 + serine_endoprotease_DegQ RG38_13735 APK20914 2770120 2771187 + serine_endoprotease RG38_13740 APK20915 2771249 2772187 - malate_dehydrogenase RG38_13745 APK20916 2772622 2773092 + arginine_repressor RG38_13750 APK20917 2773457 2773720 + membrane_protein RG38_13755 APK20918 2773776 2774048 - hypothetical_protein RG38_13760 APK20919 2774140 2776107 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG38_13765 APK20920 2776113 2777045 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG38_13770 APK22895 2777053 2777256 - transporter RG38_13775 APK20921 2777439 2778368 + transcriptional_regulator RG38_13780 APK20922 2778496 2779941 - protease_TldD tldD APK20923 2780097 2783897 - hypothetical_protein RG38_13790 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APK20899 91 698 107.449856734 0.0 PJR32595.1 APK20900 98 311 100.0 7e-106 PJR32596.1 APK20901 97 510 100.0 6e-180 PJR32597.1 APK20902 99 456 100.0 1e-160 PJR32600.1 APK20905 99 536 100.0 0.0 >> 219. LR134227_0 Source: Escherichia coli strain NCTC9102 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3327 Table of genes, locations, strands and annotations of subject cluster: VEC62396 484346 485791 + TldD_protein tldD VEC62397 485925 486854 - LysR_family_transcriptional_regulator aaeR VEC62398 487037 487240 + protein_AaeX aaeX VEC62399 487248 488180 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VEC62400 488186 490153 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VEC62401 490245 490517 + barnase_inhibitor yhcO VEC62402 490573 490836 - protein_YcfR ycfR VEC62403 491201 491671 - arginine_repressor argR VEC62404 492106 493044 + malate_dehydrogenase mdh VEC62405 493107 494174 - protease degS VEC62406 494264 495631 - serine_endoprotease degQ VEC62407 495785 496183 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VEC62408 496377 497504 + putative_ATP/GTP-binding_protein yhcM VEC62409 497723 498151 + 50S_ribosomal_protein_L13 rplM VEC62410 498167 498559 + 30S_ribosomal_protein_S9 rpsI VEC62411 498954 499592 + stringent_starvation_protein_A sspA VEC62412 499598 500095 + stringent_starvation_protein_B sspB VEC62413 500138 501505 - C4-dicarboxylate_transporter dcuD VEC62414 501885 502676 + GntR_family_transcriptional_regulator nanR VEC62415 502798 503691 + N-acetylneuraminate_lyase nanA VEC62416 503800 505290 + sialic_acid_transporter nanT VEC62417 505338 506027 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VEC62418 506024 506899 + putative_transcriptional_regulator nanK VEC62419 506896 507360 + beta-galactosidase yhcH VEC62420 507420 508547 - protein yhcG VEC62421 508732 509448 - putative_transcriptional_regulator yhcF VEC62422 509445 509990 - Uncharacterised_protein NCTC9102_00502 VEC62423 509987 512368 - putative_outer_membrane_protein yhcD VEC62424 512389 513063 - putative_periplasmic_chaperone_protein yhcA VEC62425 513069 513173 - Uncharacterised_protein NCTC9102_00505 VEC62426 513235 513999 - periplasmic_protein gltF VEC62427 514559 515977 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VEC62428 515990 520543 - glutamate_synthase_subunit_alpha gltB VEC62429 521125 522054 + putative_radical_SAM_protein NCTC9102_00509 VEC62430 522150 524486 + aerobic_respiration_control_protein arcB VEC62431 524716 525369 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VEC62432 525366 526094 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VEC62433 526091 526723 - protein yrbL VEC62434 526937 527209 - phosphocarrier_protein ptsO VEC62435 527206 528060 - putative_ATPase yhbJ VEC62436 528106 528597 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VEC62420 90 684 107.449856734 0.0 PJR32596.1 VEC62418 97 507 100.0 1e-178 PJR32598.1 VEC62416 99 990 100.0 0.0 PJR32599.1 VEC62415 100 611 100.0 0.0 PJR32600.1 VEC62414 99 536 100.0 0.0 >> 220. CP050646_0 Source: Escherichia coli strain PapM-36-2 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3193 Table of genes, locations, strands and annotations of subject cluster: QIT52399 3527584 3529029 + metalloprotease_TldD tldD QIT52400 3529157 3530086 - HTH-type_transcriptional_activator_AaeR aaeR QIT52401 3530269 3530472 + AaeX_family_protein G6008_16860 QIT52402 3530480 3531412 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QIT52403 3531418 3533385 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIT52404 3533477 3533749 + hypothetical_protein G6008_16875 QIT52405 3533805 3534068 - peroxide/acid_stress_response_protein_YhcN yhcN QIT52406 3534433 3534903 - transcriptional_regulator_ArgR argR QIT52407 3535338 3536276 + malate_dehydrogenase mdh QIT52408 3536339 3537406 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QIT52409 3537496 3538863 - serine_endoprotease_DegQ degQ QIT52410 3539017 3539415 - DUF1043_family_protein G6008_16905 QIT52411 3539609 3540736 + cell_division_protein_ZapE zapE QIT52412 3540955 3541383 + 50S_ribosomal_protein_L13 rplM QIT52413 3541399 3541791 + 30S_ribosomal_protein_S9 rpsI QIT52414 3542186 3542824 + stringent_starvation_protein_A sspA QIT52415 3542830 3543327 + ClpXP_protease_specificity-enhancing_factor sspB QIT52416 3543370 3544737 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIT52417 3545117 3545908 + transcriptional_regulator_NanR nanR QIT52418 3546030 3546923 + N-acetylneuraminate_lyase nanA QIT52419 3547032 3548522 + sialic_acid_transporter_NanT nanT QIT52420 3548570 3549259 + N-acetylmannosamine-6-phosphate_2-epimerase G6008_16955 QIT53590 3549256 3550131 + N-acetylmannosamine_kinase nanK QIT52421 3550128 3550592 + DUF386_domain-containing_protein G6008_16965 QIT52422 3550652 3551779 - DUF1016_domain-containing_protein G6008_16970 QIT52423 3551963 3553381 - glutamate_synthase_subunit_GltD gltD QIT53591 3553394 3557854 - glutamate_synthase_large_subunit gltB QIT52424 3558529 3559458 + TIGR01212_family_radical_SAM_protein G6008_16985 QIT52425 3559554 3561890 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIT52426 3562120 3562773 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIT52427 3562770 3563498 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QIT52428 3563495 3564127 - PhoP_regulatory_network_protein_YrbL yrbL QIT52429 3564341 3564613 - PTS_phosphocarrier_protein_NPr npr QIT52430 3564610 3565464 - RNase_adapter_RapZ rapZ QIT52431 3565510 3566001 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QIT52432 3566119 3566406 - ribosome_hibernation_promoting_factor hpf QIT52433 3566429 3567862 - RNA_polymerase_factor_sigma-54 rpoN QIT52434 3567910 3568635 - LPS_export_ABC_transporter_ATP-binding_protein lptB QIT52435 3568642 3569199 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QIT52436 3569168 3569743 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QIT52437 3569740 3570306 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QIT52438 3570327 3571313 - arabinose-5-phosphate_isomerase_KdsD kdsD QIT52439 3571327 3572304 - calcium/sodium_antiporter G6008_17060 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QIT52422 92 701 107.449856734 0.0 PJR32596.1 QIT53590 97 509 100.0 2e-179 PJR32597.1 QIT52420 99 456 100.0 1e-160 PJR32598.1 QIT52419 99 990 100.0 0.0 PJR32600.1 QIT52417 100 537 100.0 0.0 >> 221. CP041302_0 Source: Escherichia coli strain MSHS 472 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3193 Table of genes, locations, strands and annotations of subject cluster: QDJ65065 476021 477466 + metalloprotease_TldD tldD QDJ65066 477594 478523 - HTH-type_transcriptional_activator_AaeR aaeR QDJ65067 478706 478909 + DUF1656_domain-containing_protein FK543_03310 QDJ65068 478917 479849 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QDJ65069 479855 481822 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QDJ65070 481914 482186 + hypothetical_protein FK543_03325 QDJ65071 482242 482505 - peroxide/acid_stress_response_protein_YhcN yhcN QDJ65072 482869 483339 - transcriptional_regulator_ArgR argR QDJ65073 483774 484712 + malate_dehydrogenase mdh QDJ65074 484775 485842 - serine_endoprotease_DegS FK543_03345 QDJ65075 485932 487299 - serine_endoprotease_DegQ degQ QDJ65076 487453 487851 - DUF1043_family_protein FK543_03355 QDJ65077 488045 489172 + cell_division_protein_ZapE FK543_03360 QDJ65078 489391 489819 + 50S_ribosomal_protein_L13 rplM QDJ65079 489835 490227 + 30S_ribosomal_protein_S9 rpsI QDJ65080 490145 490366 - hypothetical_protein FK543_03375 QDJ65081 490622 491260 + stringent_starvation_protein_A sspA QDJ65082 491266 491763 + ClpXP_protease_specificity-enhancing_factor sspB QDJ65083 491806 493173 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QDJ65084 493553 494344 + transcriptional_regulator_NanR nanR QDJ65085 494466 495359 + N-acetylneuraminate_lyase nanA QDJ65086 495468 496958 + sialic_acid_transporter_NanT nanT QDJ65087 497006 497695 + N-acetylmannosamine-6-phosphate_2-epimerase FK543_03410 QDJ68857 497692 498567 + N-acetylmannosamine_kinase FK543_03415 QDJ65088 498564 499028 + DUF386_domain-containing_protein FK543_03420 QDJ65089 499088 500215 - DUF1016_domain-containing_protein FK543_03425 QDJ65090 500399 501817 - glutamate_synthase FK543_03430 QDJ68858 501830 506290 - glutamate_synthase_large_subunit gltB QDJ65091 506965 507894 + TIGR01212_family_radical_SAM_protein FK543_03440 QDJ65092 507990 510326 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QDJ65093 510556 511209 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QDJ65094 511206 511934 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QDJ65095 511931 512563 - PhoP_regulatory_network_protein_YrbL yrbL QDJ65096 512777 513049 - PTS_phosphocarrier_protein_NPr npr QDJ65097 513046 513900 - RNase_adapter_RapZ rapZ QDJ65098 513946 514437 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QDJ65099 514555 514842 - ribosome_hibernation_promoting_factor FK543_03480 QDJ65100 514865 516298 - RNA_polymerase_factor_sigma-54 rpoN QDJ65101 516346 517071 - LPS_export_ABC_transporter_ATP-binding_protein lptB QDJ65102 517078 517635 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QDJ65103 517604 518179 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QDJ65104 518176 518742 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QDJ65105 518763 519749 - arabinose-5-phosphate_isomerase_KdsD kdsD QDJ65106 519763 520740 - calcium/sodium_antiporter FK543_03515 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QDJ65089 92 701 107.449856734 0.0 PJR32596.1 QDJ68857 97 509 100.0 2e-179 PJR32597.1 QDJ65087 99 456 100.0 1e-160 PJR32598.1 QDJ65086 99 990 100.0 0.0 PJR32600.1 QDJ65084 100 537 100.0 0.0 >> 222. CP029212_0 Source: Escherichia coli strain H8Ecoli chromosome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3193 Table of genes, locations, strands and annotations of subject cluster: AWJ03341 478994 480439 + metalloprotease_TldD DEP49_02485 AWJ03342 480567 481496 - HTH-type_transcriptional_activator_AaeR DEP49_02490 AWJ03343 481679 481882 + protein_AaeX DEP49_02495 AWJ03344 481890 482822 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DEP49_02500 AWJ03345 482828 484795 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DEP49_02505 AWJ03346 484887 485159 + hypothetical_protein DEP49_02510 AWJ03347 485215 485478 - DUF1471_domain-containing_protein DEP49_02515 AWJ03348 485843 486313 - arginine_repressor DEP49_02520 AWJ03349 486748 487686 + malate_dehydrogenase DEP49_02525 AWJ03350 487749 488816 - outer_membrane-stress_sensor_serine endopeptidase DegS DEP49_02530 AWJ03351 488906 490273 - periplasmic_pH-dependent_serine_endoprotease DegQ DEP49_02535 AWJ03352 490427 490825 - DUF1043_domain-containing_protein DEP49_02540 AWJ03353 491019 492146 + cell_division_protein_ZapE DEP49_02545 AWJ03354 492365 492793 + 50S_ribosomal_protein_L13 DEP49_02550 AWJ03355 492809 493201 + 30S_ribosomal_protein_S9 DEP49_02555 AWJ03356 493119 493340 - hypothetical_protein DEP49_02560 AWJ07259 493314 493493 + hypothetical_protein DEP49_02565 AWJ07258 493445 493654 - hypothetical_protein DEP49_02570 AWJ03357 493596 494234 + stringent_starvation_protein_A DEP49_02575 AWJ03358 494240 494737 + stringent_starvation_protein_B DEP49_02580 AWJ03359 494780 496147 - C4-dicarboxylate_transporter_DcuC DEP49_02585 DEP49_02590 496147 496257 + transposase no_locus_tag AWJ03360 496527 497318 + transcriptional_regulator_NanR nanR AWJ03361 497440 498333 + N-acetylneuraminate_lyase nanA AWJ03362 498442 499932 + MFS_transporter DEP49_02605 AWJ03363 499980 500669 + N-acetylmannosamine-6-phosphate_2-epimerase DEP49_02610 AWJ03364 500666 501541 + N-acetylmannosamine_kinase DEP49_02615 AWJ03365 501538 502002 + YhcH/YjgK/YiaL_family_protein DEP49_02620 AWJ03366 502062 503189 - DUF1016_domain-containing_protein DEP49_02625 AWJ03367 503373 504791 - glutamate_synthase DEP49_02630 AWJ03368 504804 509264 - glutamate_synthase_large_subunit DEP49_02635 DEP49_02640 509187 509413 + hypothetical_protein no_locus_tag AWJ03369 509311 509547 + hypothetical_protein DEP49_02645 AWJ07260 509939 510868 + TIGR01212_family_radical_SAM_protein DEP49_02650 AWJ03370 510964 513300 + hybrid_sensor_histidine_kinase/response regulator DEP49_02655 AWJ03371 513530 514183 + glutamine_amidotransferase DEP49_02660 AWJ03372 514180 514908 + monofunctional_biosynthetic_peptidoglycan transglycosylase DEP49_02665 AWJ03373 514905 515537 - protein_YrbL yrbL AWJ03374 515751 516023 - phosphocarrier_protein_NPr DEP49_02675 AWJ03375 516020 516874 - RNase_adapter_RapZ DEP49_02680 AWJ03376 516920 517411 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN DEP49_02685 AWJ03377 517529 517816 - ribosome_hibernation_promoting_factor DEP49_02690 AWJ03378 517839 519272 - RNA_polymerase_sigma-54_factor DEP49_02695 AWJ03379 519320 520045 - ABC_transporter_ATP-binding_protein DEP49_02700 AWJ03380 520052 520609 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA DEP49_02705 AWJ03381 520578 521153 - LPS_export_ABC_transporter_periplasmic_protein LptC DEP49_02710 AWJ03382 521150 521716 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC AWJ03383 521737 522723 - arabinose_5-phosphate_isomerase_KdsD DEP49_02720 AWJ03384 522737 523714 - calcium/sodium_antiporter DEP49_02725 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AWJ03366 92 701 107.449856734 0.0 PJR32596.1 AWJ03364 97 509 100.0 2e-179 PJR32597.1 AWJ03363 99 456 100.0 1e-160 PJR32598.1 AWJ03362 99 990 100.0 0.0 PJR32600.1 AWJ03360 100 537 100.0 0.0 >> 223. CP020048_0 Source: Escherichia coli strain AR_0118, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3193 Table of genes, locations, strands and annotations of subject cluster: ARA18426 3155390 3156835 + metalloprotease_TldD AM365_16695 ARA18427 3156963 3157892 - HTH-type_transcriptional_activator_AaeR AM365_16700 ARA18428 3158075 3158278 + protein_AaeX AM365_16705 ARA18429 3158286 3159218 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA AM365_16710 ARA18430 3159224 3161191 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB AM365_16715 ARA18431 3161283 3161555 + hypothetical_protein AM365_16720 ARA18432 3161611 3161874 - hypothetical_protein AM365_16725 ARA18433 3162239 3162709 - arginine_repressor AM365_16730 ARA18434 3163144 3164082 + malate_dehydrogenase AM365_16735 ARA18435 3164145 3165212 - outer_membrane-stress_sensor_serine endopeptidase DegS AM365_16740 ARA18436 3165302 3166669 - periplasmic_pH-dependent_serine_endoprotease DegQ AM365_16745 ARA18437 3166823 3167221 - hypothetical_protein AM365_16750 ARA18438 3167415 3168542 + cell_division_protein_ZapE AM365_16755 ARA18439 3168761 3169189 + 50S_ribosomal_protein_L13 AM365_16760 ARA18440 3169205 3169597 + 30S_ribosomal_protein_S9 AM365_16765 ARA18441 3169992 3170630 + stringent_starvation_protein_A sspA ARA18442 3170636 3171133 + stringent_starvation_protein_B AM365_16775 ARA18443 3171176 3172543 - C4-dicarboxylate_transporter AM365_16780 AM365_16785 3172543 3172653 + transposase no_locus_tag ARA18444 3172923 3173714 + transcriptional_regulator_NanR AM365_16790 ARA18445 3173836 3174729 + N-acetylneuraminate_lyase AM365_16795 ARA18446 3174838 3176328 + MFS_transporter AM365_16800 ARA18447 3176376 3177065 + N-acetylmannosamine-6-phosphate_2-epimerase AM365_16805 ARA18448 3177062 3177937 + N-acetylmannosamine_kinase AM365_16810 ARA18449 3177934 3178398 + hypothetical_protein AM365_16815 ARA18450 3178458 3179585 - hypothetical_protein AM365_16820 ARA18451 3179769 3181187 - glutamate_synthase AM365_16825 ARA18452 3181200 3185660 - glutamate_synthase AM365_16830 AM365_16835 3185583 3185809 + hypothetical_protein no_locus_tag ARA18453 3185707 3185943 + hypothetical_protein AM365_16840 ARA20332 3186335 3187264 + TIGR01212_family_radical_SAM_protein AM365_16845 ARA18454 3187360 3189696 + hybrid_sensor_histidine_kinase/response regulator AM365_16850 ARA18455 3189926 3190579 + glutamine_amidotransferase AM365_16855 ARA18456 3190576 3191304 + monofunctional_biosynthetic_peptidoglycan transglycosylase AM365_16860 ARA18457 3191301 3191933 - hypothetical_protein AM365_16865 ARA18458 3192147 3192419 - phosphocarrier_protein_NPr AM365_16870 ARA18459 3192416 3193270 - RNase_adaptor_protein_RapZ AM365_16875 ARA18460 3193316 3193807 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN AM365_16880 ARA18461 3193925 3194212 - ribosome_hibernation_promoting_factor AM365_16885 ARA18462 3194235 3195668 - RNA_polymerase_sigma-54_factor AM365_16890 ARA18463 3195716 3196441 - ABC_transporter_ATP-binding_protein AM365_16895 ARA18464 3196448 3197005 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA AM365_16900 ARA18465 3196974 3197549 - LPS_export_ABC_transporter_periplasmic_protein LptC AM365_16905 ARA18466 3197546 3198112 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC AM365_16910 ARA18467 3198133 3199119 - arabinose_5-phosphate_isomerase_KdsD AM365_16915 ARA18468 3199133 3200110 - calcium/sodium_antiporter AM365_16920 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ARA18450 92 701 107.449856734 0.0 PJR32596.1 ARA18448 97 509 100.0 2e-179 PJR32597.1 ARA18447 99 456 100.0 1e-160 PJR32598.1 ARA18446 99 990 100.0 0.0 PJR32600.1 ARA18444 100 537 100.0 0.0 >> 224. CP018948_0 Source: Escherichia coli strain Ecol_224 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3193 Table of genes, locations, strands and annotations of subject cluster: AQV18772 720917 722362 + metalloprotease_TldD BE957_06130 AQV18773 722490 723419 - HTH-type_transcriptional_activator_AaeR BE957_06135 AQV18774 723602 723805 + protein_AaeX BE957_06140 AQV18775 723813 724745 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA BE957_06145 AQV18776 724751 726718 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BE957_06150 AQV18777 726810 727082 + hypothetical_protein BE957_06155 AQV18778 727138 727401 - hypothetical_protein BE957_06160 AQV18779 727766 728236 - arginine_repressor BE957_06165 AQV18780 728671 729609 + malate_dehydrogenase BE957_06170 AQV18781 729672 730739 - outer_membrane-stress_sensor_serine endopeptidase DegS BE957_06175 AQV18782 730829 732196 - periplasmic_pH-dependent_serine_endoprotease DegQ BE957_06180 AQV18783 732350 732748 - hypothetical_protein BE957_06185 AQV18784 732942 734069 + cell_division_protein_ZapE BE957_06190 AQV18785 734288 734716 + 50S_ribosomal_protein_L13 BE957_06195 AQV18786 734732 735124 + 30S_ribosomal_protein_S9 BE957_06200 AQV18787 735519 736157 + stringent_starvation_protein_A sspA AQV18788 736163 736660 + stringent_starvation_protein_B BE957_06210 AQV18789 736703 738070 - C4-dicarboxylate_transporter BE957_06215 BE957_06220 738070 738180 + transposase no_locus_tag AQV18790 738450 739241 + transcriptional_regulator_NanR BE957_06225 AQV18791 739363 740256 + N-acetylneuraminate_lyase BE957_06230 AQV18792 740365 741855 + MFS_transporter BE957_06235 AQV18793 741903 742592 + N-acetylmannosamine-6-phosphate_2-epimerase BE957_06240 AQV18794 742589 743464 + N-acetylmannosamine_kinase BE957_06245 AQV18795 743461 743925 + hypothetical_protein BE957_06250 AQV18796 743985 745112 - hypothetical_protein BE957_06255 AQV18797 745296 746714 - glutamate_synthase BE957_06260 AQV18798 746727 751295 - glutamate_synthase BE957_06265 AQV18799 751234 751470 + hypothetical_protein BE957_06270 AQV22764 751862 752791 + TIGR01212_family_radical_SAM_protein BE957_06275 AQV18800 752887 755223 + hybrid_sensor_histidine_kinase/response regulator BE957_06280 AQV18801 755453 756106 + glutamine_amidotransferase BE957_06285 AQV18802 756103 756831 + monofunctional_biosynthetic_peptidoglycan transglycosylase BE957_06290 AQV18803 756828 757460 - hypothetical_protein BE957_06295 AQV18804 757674 757946 - phosphocarrier_protein_NPr BE957_06300 AQV18805 757943 758797 - RNase_adaptor_protein_RapZ BE957_06305 AQV18806 758843 759334 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN BE957_06310 AQV18807 759452 759739 - ribosome_hibernation_promoting_factor BE957_06315 AQV18808 759762 761195 - RNA_polymerase_sigma-54_factor BE957_06320 AQV18809 761243 761968 - ABC_transporter_ATP-binding_protein BE957_06325 AQV18810 761975 762532 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA BE957_06330 AQV18811 762501 763076 - LPS_export_ABC_transporter_periplasmic_protein LptC BE957_06335 AQV18812 763073 763639 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC BE957_06340 AQV18813 763660 764646 - arabinose_5-phosphate_isomerase_KdsD BE957_06345 AQV18814 764660 765637 - calcium/sodium_antiporter BE957_06350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AQV18796 92 701 107.449856734 0.0 PJR32596.1 AQV18794 97 509 100.0 2e-179 PJR32597.1 AQV18793 99 456 100.0 1e-160 PJR32598.1 AQV18792 99 990 100.0 0.0 PJR32600.1 AQV18790 100 537 100.0 0.0 >> 225. CP018323_0 Source: Escherichia coli strain KSC9 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3193 Table of genes, locations, strands and annotations of subject cluster: ARV29235 958795 959781 + D-arabinose_5-phosphate_isomerase BS635_05015 ARV29236 959802 960368 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BS635_05020 ARV29237 960365 960940 + LPS_export_ABC_transporter_periplasmic_protein LptC BS635_05025 ARV29238 960909 961466 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA BS635_05030 ARV29239 961473 962198 + LPS_export_ABC_transporter_ATP-binding_protein BS635_05035 ARV29240 962246 963679 + RNA_polymerase_factor_sigma-54 BS635_05040 ARV29241 963702 963989 + ribosomal_subunit_interface_protein BS635_05045 ARV29242 964107 964598 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN BS635_05050 ARV29243 964644 965498 + RNase_adaptor_protein_RapZ BS635_05055 ARV29244 965495 965767 + phosphohistidinoprotein-hexose phosphotransferase BS635_05060 ARV29245 965981 966613 + hypothetical_protein BS635_05065 ARV29246 966610 967338 - monofunctional_biosynthetic_peptidoglycan transglycosylase BS635_05070 ARV29247 967335 967988 - isoprenoid_biosynthesis_protein_ElbB BS635_05075 ARV29248 968218 970554 - aerobic_respiration_two-component_sensor histidine kinase ArcB BS635_05080 ARV32959 970650 971579 - TIGR01212_family_radical_SAM_protein BS635_05085 ARV29249 971971 972207 - hypothetical_protein BS635_05090 BS635_05095 972105 972331 - hypothetical_protein no_locus_tag ARV29250 972254 976714 + glutamate_synthase_large_subunit BS635_05100 ARV29251 976727 978145 + glutamate_synthase BS635_05105 ARV29252 978329 979456 + hypothetical_protein BS635_05110 ARV29253 979516 979980 - hypothetical_protein BS635_05115 ARV29254 979977 980852 - N-acetylmannosamine_kinase BS635_05120 ARV29255 980849 981538 - N-acetylmannosamine-6-phosphate_2-epimerase BS635_05125 ARV29256 981586 983076 - MFS_transporter BS635_05130 ARV29257 983185 984078 - N-acetylneuraminate_lyase BS635_05135 ARV29258 984200 984991 - transcriptional_regulator_NanR BS635_05140 BS635_05145 985261 985371 - transposase no_locus_tag ARV29259 985371 986738 + C4-dicarboxylate_transporter BS635_05150 ARV29260 986781 987278 - ClpXP_protease_specificity-enhancing_factor BS635_05155 ARV29261 987284 987922 - stringent_starvation_protein_A sspA ARV29262 988317 988709 - 30S_ribosomal_protein_S9 BS635_05165 ARV29263 988725 989153 - 50S_ribosomal_protein_L13 BS635_05170 ARV29264 989372 990499 - cell_division_protein_ZapE BS635_05175 ARV29265 990693 991091 + hypothetical_protein BS635_05180 ARV29266 991245 992612 + serine_endoprotease_DegQ BS635_05185 ARV29267 992702 993769 + outer_membrane-stress_sensor_serine endopeptidase DegS BS635_05190 ARV29268 993832 994770 - malate_dehydrogenase BS635_05195 ARV29269 995205 995675 + arginine_repressor BS635_05200 ARV29270 996040 996303 + hypothetical_protein BS635_05205 ARV29271 996359 996631 - hypothetical_protein BS635_05210 ARV29272 996723 998690 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BS635_05215 ARV29273 998696 999628 - efflux_transporter_periplasmic_adaptor_subunit BS635_05220 ARV29274 999636 999839 - transporter BS635_05225 ARV29275 1000022 1000951 + transcriptional_regulator BS635_05230 ARV29276 1001079 1002524 - metalloprotease_TldD BS635_05235 ARV29277 1002680 1006480 - TIGR02099_family_protein BS635_05240 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ARV29252 92 701 107.449856734 0.0 PJR32596.1 ARV29254 97 509 100.0 2e-179 PJR32597.1 ARV29255 99 456 100.0 1e-160 PJR32598.1 ARV29256 99 990 100.0 0.0 PJR32600.1 ARV29258 100 537 100.0 0.0 >> 226. CP016546_0 Source: Escherichia coli strain O177:H21 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3193 Table of genes, locations, strands and annotations of subject cluster: ANW30053 2900028 2901473 + metalloprotease_TldD BB405_14565 ANW30054 2901601 2902530 - transcriptional_regulator BB405_14570 ANW32196 2902713 2902916 + transporter BB405_14575 ANW30055 2902924 2903856 + efflux_transporter_periplasmic_adaptor_subunit BB405_14580 ANW30056 2903862 2905829 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BB405_14585 ANW30057 2905921 2906193 + hypothetical_protein BB405_14590 ANW30058 2906249 2906512 - hypothetical_protein BB405_14595 ANW30059 2906877 2907347 - arginine_repressor BB405_14600 ANW30060 2907782 2908720 + malate_dehydrogenase BB405_14605 ANW30061 2908783 2909850 - outer_membrane-stress_sensor_serine endopeptidase DegS BB405_14610 ANW30062 2909940 2911307 - serine_endoprotease_DegQ BB405_14615 ANW30063 2911461 2911859 - hypothetical_protein BB405_14620 ANW30064 2912053 2913180 + hypothetical_protein BB405_14625 ANW30065 2913399 2913827 + 50S_ribosomal_protein_L13 BB405_14630 ANW30066 2913843 2914235 + 30S_ribosomal_protein_S9 BB405_14635 ANW30067 2914630 2915268 + stringent_starvation_protein_A sspA ANW30068 2915274 2915771 + ClpXP_protease_specificity-enhancing_factor BB405_14645 ANW30069 2915814 2917181 - C4-dicarboxylate_transporter BB405_14650 ANW30070 2917561 2918352 + transcriptional_regulator_NanR BB405_14655 ANW30071 2918474 2919367 + N-acetylneuraminate_lyase BB405_14660 ANW30072 2919476 2920966 + sialic_acid_transporter BB405_14665 ANW30073 2921014 2921703 + N-acetylmannosamine-6-phosphate_2-epimerase BB405_14670 ANW30074 2921700 2922575 + N-acetylmannosamine_kinase BB405_14675 ANW30075 2922572 2923036 + hypothetical_protein BB405_14680 ANW30076 2923096 2924223 - hypothetical_protein BB405_14685 ANW30077 2924407 2925825 - glutamate_synthase BB405_14690 ANW32197 2925838 2930298 - glutamate_synthase_large_subunit BB405_14695 ANW32198 2930973 2931902 + TIGR01212_family_radical_SAM_protein BB405_14700 ANW30078 2931998 2934334 + aerobic_respiration_two-component_sensor histidine kinase ArcB BB405_14705 ANW30079 2934564 2935217 + isoprenoid_biosynthesis_protein_ElbB BB405_14710 ANW30080 2935214 2935942 + monofunctional_biosynthetic_peptidoglycan transglycosylase BB405_14715 ANW30081 2935939 2936571 - hypothetical_protein BB405_14720 ANW30082 2936785 2937057 - phosphohistidinoprotein-hexose phosphotransferase BB405_14725 ANW30083 2937054 2937908 - RNase_adaptor_protein_RapZ BB405_14730 ANW30084 2937954 2938445 - PTS_IIA-like_nitrogen-regulatory_protein_PtsN BB405_14735 ANW30085 2938563 2938850 - ribosomal_subunit_interface_protein BB405_14740 ANW30086 2938873 2940306 - RNA_polymerase_factor_sigma-54 BB405_14745 ANW30087 2940354 2941079 - LPS_export_ABC_transporter_ATP-binding_protein BB405_14750 ANW30088 2941086 2941643 - lipopolysaccharide_transport_periplasmic_protein LptA BB405_14755 ANW30089 2941612 2942187 - LPS_export_ABC_transporter_periplasmic_protein LptC BB405_14760 ANW30090 2942184 2942750 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BB405_14765 ANW30091 2942771 2943757 - D-arabinose_5-phosphate_isomerase BB405_14770 ANW30092 2943771 2944748 - calcium/sodium_antiporter BB405_14775 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ANW30076 92 701 107.449856734 0.0 PJR32596.1 ANW30074 97 509 100.0 2e-179 PJR32597.1 ANW30073 99 456 100.0 1e-160 PJR32598.1 ANW30072 99 990 100.0 0.0 PJR32600.1 ANW30070 100 537 100.0 0.0 >> 227. CP010230_0 Source: Escherichia coli strain S21, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3193 Table of genes, locations, strands and annotations of subject cluster: APL57199 2841904 2842890 + D-arabinose_5-phosphate_isomerase RG67_14000 APL57200 2842911 2843477 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG67_14005 APL57201 2843474 2844049 + lipopolysaccharide_transporter RG67_14010 APL57202 2844018 2844575 + lipopolysaccharide_transporter RG67_14015 APL57203 2844582 2845307 + sugar_ABC_transporter_ATP-binding_protein RG67_14020 APL57204 2845355 2846788 + RNA_polymerase_factor_sigma-54 RG67_14025 APL57205 2846811 2847098 + ribosome_hibernation_promoting_factor_HPF RG67_14030 APL57206 2847216 2847707 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG67_14035 APL57207 2847753 2848607 + glmZ(sRNA)-inactivating_NTPase RG67_14040 APL57208 2848604 2848876 + phosphohistidinoprotein-hexose phosphotransferase RG67_14045 APL57209 2849090 2849722 + hypothetical_protein RG67_14050 APL57210 2849719 2850447 - peptidoglycan_transglycosylase mtgA APL57211 2850444 2851097 - isoprenoid_biosynthesis_protein RG67_14060 APL57212 2851327 2853663 - aerobic_respiration_control_sensor_protein_ArcB RG67_14065 APL59023 2853759 2854688 - hypothetical_protein RG67_14070 APL59024 2855363 2859823 + glutamate_synthase gltB APL57213 2859836 2861254 + glutamate_synthase RG67_14080 APL57214 2861438 2862565 + hypothetical_protein RG67_14085 APL57215 2862625 2863089 - hypothetical_protein RG67_14090 APL57216 2863086 2863961 - N-acetylmannosamine_kinase RG67_14095 APL57217 2863958 2864647 - N-acetylmannosamine-6-phosphate_2-epimerase RG67_14100 APL57218 2864695 2866185 - sialic_acid_transporter RG67_14105 APL57219 2866294 2867187 - N-acetylneuraminate_lyase RG67_14110 APL57220 2867309 2868100 - transcriptional_regulator_NanR RG67_14115 APL57221 2868480 2869847 + C4-dicarboxylate_transporter RG67_14120 APL57222 2869890 2870387 - Clp_protease_ClpP RG67_14125 APL57223 2870393 2871031 - stringent_starvation_protein_A sspA APL57224 2871426 2871818 - 30S_ribosomal_protein_S9 RG67_14135 APL57225 2871834 2872262 - 50S_ribosomal_protein_L13 RG67_14140 APL57226 2872481 2873608 - hypothetical_protein RG67_14145 APL57227 2873802 2874200 + hypothetical_protein RG67_14150 APL57228 2874354 2875721 + serine_endoprotease_DegQ RG67_14155 APL57229 2875811 2876878 + serine_endoprotease RG67_14160 APL57230 2876941 2877879 - malate_dehydrogenase RG67_14165 APL57231 2878314 2878784 + arginine_repressor RG67_14170 APL57232 2879149 2879412 + membrane_protein RG67_14175 APL57233 2879468 2879740 - hypothetical_protein RG67_14180 APL57234 2879832 2881799 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG67_14185 APL57235 2881805 2882737 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG67_14190 APL59025 2882745 2882948 - transporter RG67_14195 APL57236 2883131 2884060 + transcriptional_regulator RG67_14200 APL57237 2884188 2885633 - protease_TldD tldD APL57238 2885789 2889589 - hypothetical_protein RG67_14210 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APL57214 92 701 107.449856734 0.0 PJR32596.1 APL57216 97 509 100.0 2e-179 PJR32597.1 APL57217 99 456 100.0 1e-160 PJR32598.1 APL57218 99 990 100.0 0.0 PJR32600.1 APL57220 100 537 100.0 0.0 >> 228. CP010177_0 Source: Escherichia coli strain H14, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3193 Table of genes, locations, strands and annotations of subject cluster: APK84690 1842730 1844175 + protease_TldD tldD APK84691 1844303 1845232 - transcriptional_regulator RG52_08985 APK87389 1845415 1845618 + transporter RG52_08990 APK84692 1845626 1846558 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG52_08995 APK84693 1846564 1848531 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG52_09000 APK84694 1848623 1848895 + hypothetical_protein RG52_09005 APK84695 1848951 1849214 - membrane_protein RG52_09010 APK84696 1849579 1850049 - arginine_repressor RG52_09015 APK84697 1850484 1851422 + malate_dehydrogenase RG52_09020 APK84698 1851485 1852552 - serine_endoprotease RG52_09025 APK84699 1852642 1854009 - serine_endoprotease_DegQ RG52_09030 APK84700 1854163 1854561 - hypothetical_protein RG52_09035 APK84701 1854755 1855882 + hypothetical_protein RG52_09040 APK84702 1856101 1856529 + 50S_ribosomal_protein_L13 RG52_09045 APK84703 1856545 1856937 + 30S_ribosomal_protein_S9 RG52_09050 APK84704 1857332 1857970 + stringent_starvation_protein_A sspA APK84705 1857976 1858473 + Clp_protease_ClpP RG52_09060 APK84706 1858516 1859883 - C4-dicarboxylate_transporter RG52_09065 APK84707 1860263 1861054 + transcriptional_regulator_NanR RG52_09070 APK84708 1861176 1862069 + N-acetylneuraminate_lyase RG52_09075 APK84709 1862178 1863668 + sialic_acid_transporter RG52_09080 APK84710 1863716 1864405 + N-acetylmannosamine-6-phosphate_2-epimerase RG52_09085 APK84711 1864402 1865277 + N-acetylmannosamine_kinase RG52_09090 APK84712 1865274 1865738 + hypothetical_protein RG52_09095 APK84713 1865798 1866925 - hypothetical_protein RG52_09100 APK84714 1867109 1868527 - glutamate_synthase RG52_09105 APK87390 1868540 1873000 - glutamate_synthase gltB APK87391 1873675 1874604 + hypothetical_protein RG52_09115 APK84715 1874700 1877036 + aerobic_respiration_control_sensor_protein_ArcB RG52_09120 APK84716 1877266 1877919 + isoprenoid_biosynthesis_protein RG52_09125 APK84717 1877916 1878644 + peptidoglycan_transglycosylase mtgA APK84718 1878641 1879273 - hypothetical_protein RG52_09135 APK84719 1879487 1879759 - phosphohistidinoprotein-hexose phosphotransferase RG52_09140 APK84720 1879756 1880610 - glmZ(sRNA)-inactivating_NTPase RG52_09145 APK84721 1880656 1881147 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG52_09150 APK84722 1881265 1881552 - ribosome_hibernation_promoting_factor_HPF RG52_09155 APK84723 1881575 1883008 - RNA_polymerase_factor_sigma-54 RG52_09160 APK84724 1883056 1883781 - sugar_ABC_transporter_ATP-binding_protein RG52_09165 APK84725 1883788 1884345 - lipopolysaccharide_transporter RG52_09170 APK84726 1884314 1884889 - lipopolysaccharide_transporter RG52_09175 APK84727 1884886 1885452 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG52_09180 APK84728 1885473 1886459 - D-arabinose_5-phosphate_isomerase RG52_09185 APK84729 1886473 1887450 - calcium/sodium:proton_antiporter RG52_09190 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APK84713 92 701 107.449856734 0.0 PJR32596.1 APK84711 97 509 100.0 2e-179 PJR32597.1 APK84710 99 456 100.0 1e-160 PJR32598.1 APK84709 99 990 100.0 0.0 PJR32600.1 APK84707 100 537 100.0 0.0 >> 229. CP010167_0 Source: Escherichia coli strain H3, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3193 Table of genes, locations, strands and annotations of subject cluster: APK59716 4550664 4551650 + D-arabinose_5-phosphate_isomerase RG46_22420 APK59717 4551671 4552237 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG46_22425 APK59718 4552234 4552809 + lipopolysaccharide_transporter RG46_22430 APK59719 4552778 4553335 + lipopolysaccharide_transporter RG46_22435 APK59720 4553342 4554067 + sugar_ABC_transporter_ATP-binding_protein RG46_22440 APK59721 4554115 4555548 + RNA_polymerase_factor_sigma-54 RG46_22445 APK59722 4555571 4555858 + ribosome_hibernation_promoting_factor_HPF RG46_22450 APK59723 4555976 4556467 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG46_22455 APK59724 4556513 4557367 + glmZ(sRNA)-inactivating_NTPase RG46_22460 APK59725 4557364 4557636 + phosphohistidinoprotein-hexose phosphotransferase RG46_22465 APK59726 4557850 4558482 + hypothetical_protein RG46_22470 APK59727 4558479 4559207 - peptidoglycan_transglycosylase mtgA APK59728 4559204 4559857 - isoprenoid_biosynthesis_protein RG46_22480 APK59729 4560087 4562423 - aerobic_respiration_control_sensor_protein_ArcB RG46_22485 APK59961 4562519 4563448 - hypothetical_protein RG46_22490 APK59962 4564123 4568583 + glutamate_synthase gltB APK59730 4568596 4570014 + glutamate_synthase RG46_22500 APK59731 4570198 4571325 + hypothetical_protein RG46_22505 APK59732 4571385 4571849 - hypothetical_protein RG46_22510 APK59733 4571846 4572721 - N-acetylmannosamine_kinase RG46_22515 APK59734 4572718 4573407 - N-acetylmannosamine-6-phosphate_2-epimerase RG46_22520 APK59735 4573455 4574945 - sialic_acid_transporter RG46_22525 APK59736 4575054 4575947 - N-acetylneuraminate_lyase RG46_22530 APK59737 4576069 4576860 - transcriptional_regulator_NanR RG46_22535 APK59738 4577240 4578607 + C4-dicarboxylate_transporter RG46_22540 APK59739 4578650 4579147 - Clp_protease_ClpP RG46_22545 APK59740 4579153 4579791 - stringent_starvation_protein_A sspA APK59741 4580186 4580578 - 30S_ribosomal_protein_S9 RG46_22555 APK59742 4580594 4581022 - 50S_ribosomal_protein_L13 RG46_22560 APK59743 4581241 4582368 - hypothetical_protein RG46_22565 APK59744 4582562 4582960 + hypothetical_protein RG46_22570 APK59745 4583114 4584481 + serine_endoprotease_DegQ RG46_22575 APK59746 4584571 4585638 + serine_endoprotease RG46_22580 APK59747 4585701 4586639 - malate_dehydrogenase RG46_22585 APK59748 4587074 4587544 + arginine_repressor RG46_22590 APK59749 4587909 4588172 + membrane_protein RG46_22595 APK59750 4588228 4588500 - hypothetical_protein RG46_22600 APK59751 4588592 4590559 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG46_22605 APK59752 4590565 4591497 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG46_22610 APK59963 4591505 4591708 - transporter RG46_22615 APK59753 4591891 4592820 + transcriptional_regulator RG46_22620 APK59754 4592948 4594393 - protease_TldD tldD APK59755 4594549 4598349 - hypothetical_protein RG46_22630 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APK59731 92 701 107.449856734 0.0 PJR32596.1 APK59733 97 509 100.0 2e-179 PJR32597.1 APK59734 99 456 100.0 1e-160 PJR32598.1 APK59735 99 990 100.0 0.0 PJR32600.1 APK59737 100 537 100.0 0.0 >> 230. CP023165_0 Source: Escherichia coli O22:H8 strain RM10809-3 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3191 Table of genes, locations, strands and annotations of subject cluster: QGQ67657 3845321 3846307 + arabinose-5-phosphate_isomerase_KdsD kdsD QGQ67658 3846328 3846894 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QGQ67659 3846891 3847466 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QGQ67660 3847435 3847992 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QGQ67661 3847999 3848724 + LPS_export_ABC_transporter_ATP-binding_protein lptB QGQ67662 3848772 3850205 + RNA_polymerase_factor_sigma-54 rpoN QGQ67663 3850228 3850515 + ribosome_hibernation_promoting_factor CLC88_20060 QGQ67664 3850633 3851124 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QGQ67665 3851170 3852024 + RNase_adapter_RapZ rapZ QGQ67666 3852021 3852293 + PTS_phosphocarrier_protein_NPr npr QGQ67667 3852507 3853139 + PhoP_regulatory_network_protein_YrbL yrbL QGQ67668 3853136 3853864 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QGQ67669 3853861 3854514 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QGQ67670 3854744 3857080 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QGQ67671 3857176 3858105 - TIGR01212_family_radical_SAM_protein CLC88_20100 QGQ68920 3858780 3863240 + glutamate_synthase_large_subunit gltB QGQ67672 3863253 3864671 + glutamate_synthase CLC88_20110 QGQ67673 3864855 3865982 + DUF1016_domain-containing_protein CLC88_20115 QGQ67674 3866042 3866506 - DUF386_domain-containing_protein CLC88_20120 QGQ67675 3866503 3867378 - N-acetylmannosamine_kinase CLC88_20125 QGQ67676 3867375 3868064 - N-acetylmannosamine-6-phosphate_2-epimerase CLC88_20130 QGQ67677 3868112 3869602 - sialic_acid_transporter_NanT nanT QGQ67678 3869711 3870604 - N-acetylneuraminate_lyase nanA QGQ67679 3870726 3871517 - transcriptional_regulator_NanR nanR QGQ67680 3871897 3873264 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QGQ67681 3873307 3873804 - ClpXP_protease_specificity-enhancing_factor sspB QGQ67682 3873810 3874448 - stringent_starvation_protein_A sspA QGQ67683 3874704 3874925 + hypothetical_protein CLC88_20165 QGQ67684 3874843 3875235 - 30S_ribosomal_protein_S9 rpsI QGQ67685 3875251 3875679 - 50S_ribosomal_protein_L13 rplM QGQ67686 3875898 3877025 - cell_division_protein_ZapE CLC88_20180 QGQ67687 3877219 3877617 + DUF1043_family_protein CLC88_20185 QGQ67688 3877771 3879138 + serine_endoprotease_DegQ degQ QGQ67689 3879228 3880295 + serine_endoprotease_DegS CLC88_20195 QGQ67690 3880358 3881296 - malate_dehydrogenase mdh QGQ67691 3881731 3882201 + transcriptional_regulator_ArgR argR QGQ67692 3882566 3882829 + peroxide/acid_stress_response_protein_YhcN yhcN QGQ67693 3882885 3883157 - hypothetical_protein CLC88_20215 QGQ67694 3883249 3885216 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QGQ67695 3885222 3886154 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QGQ67696 3886162 3886365 - DUF1656_domain-containing_protein CLC88_20230 QGQ67697 3886548 3887477 + HTH-type_transcriptional_activator_AaeR aaeR QGQ67698 3887605 3889050 - metalloprotease_TldD tldD QGQ67699 3889206 3893006 - AsmA2_domain-containing_protein CLC88_20245 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QGQ67673 91 700 107.449856734 0.0 PJR32596.1 QGQ67675 97 509 100.0 2e-179 PJR32597.1 QGQ67676 99 456 100.0 1e-160 PJR32598.1 QGQ67677 99 990 100.0 0.0 PJR32600.1 QGQ67679 100 537 100.0 0.0 >> 231. CP020509_0 Source: Escherichia coli strain 165 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3191 Table of genes, locations, strands and annotations of subject cluster: AVU43776 494977 496422 + metalloprotease_TldD AWB10_02585 AVU43777 496550 497479 - HTH-type_transcriptional_activator_AaeR AWB10_02590 AVU43778 497662 497865 + protein_AaeX AWB10_02595 AVU43779 497873 498805 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA AWB10_02600 AVU43780 498811 500778 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB AWB10_02605 AVU43781 500870 501142 + hypothetical_protein AWB10_02610 AVU43782 501198 501461 - hypothetical_protein AWB10_02615 AVU43783 501826 502296 - arginine_repressor AWB10_02620 AVU43784 502731 503669 + malate_dehydrogenase AWB10_02625 AVU43785 503732 504799 - outer_membrane-stress_sensor_serine endopeptidase DegS AWB10_02630 AVU43786 504889 506256 - periplasmic_pH-dependent_serine_endoprotease DegQ AWB10_02635 AVU43787 506410 506808 - hypothetical_protein AWB10_02640 AVU43788 507002 508129 + cell_division_protein_ZapE AWB10_02645 AVU43789 508348 508776 + 50S_ribosomal_protein_L13 AWB10_02650 AVU43790 508792 509184 + 30S_ribosomal_protein_S9 AWB10_02655 AVU43791 509102 509323 - hypothetical_protein AWB10_02660 AVU48018 509297 509476 + hypothetical_protein AWB10_02665 AVU48017 509428 509637 - hypothetical_protein AWB10_02670 AVU43792 509579 510217 + stringent_starvation_protein_A AWB10_02675 AVU43793 510223 510720 + stringent_starvation_protein_B AWB10_02680 AVU43794 510763 512130 - C4-dicarboxylate_transporter AWB10_02685 AWB10_02690 512130 512240 + transposase no_locus_tag AVU43795 512510 513301 + transcriptional_regulator_NanR AWB10_02695 AVU43796 513423 514316 + N-acetylneuraminate_lyase nanA AVU43797 514425 515915 + MFS_transporter AWB10_02705 AVU43798 515963 516652 + N-acetylmannosamine-6-phosphate_2-epimerase AWB10_02710 AVU43799 516649 517524 + N-acetylmannosamine_kinase AWB10_02715 AVU43800 517521 517985 + YhcH/YjgK/YiaL_family_protein AWB10_02720 AVU43801 518045 519172 - DUF1016_domain-containing_protein AWB10_02725 AVU43802 519356 520774 - glutamate_synthase AWB10_02730 AVU43803 520787 525247 - glutamate_synthase_large_subunit AWB10_02735 AWB10_02740 525170 525396 + hypothetical_protein no_locus_tag AVU43804 525294 525530 + hypothetical_protein AWB10_02745 AVU48019 525922 526851 + TIGR01212_family_radical_SAM_protein AWB10_02750 AVU43805 526947 529283 + hybrid_sensor_histidine_kinase/response regulator AWB10_02755 AVU43806 529513 530166 + glutamine_amidotransferase AWB10_02760 AVU43807 530163 530891 + monofunctional_biosynthetic_peptidoglycan transglycosylase AWB10_02765 AVU43808 530888 531520 - protein_YrbL AWB10_02770 AVU43809 531734 532006 - phosphocarrier_protein_NPr AWB10_02775 AVU43810 532003 532857 - RNase_adaptor_protein_RapZ AWB10_02780 AVU43811 532903 533394 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN AWB10_02785 AVU43812 533512 533799 - ribosome_hibernation_promoting_factor AWB10_02790 AVU43813 533822 535255 - RNA_polymerase_sigma-54_factor AWB10_02795 AVU43814 535303 536028 - ABC_transporter_ATP-binding_protein lptB AVU43815 536035 536592 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA AWB10_02805 AVU43816 536561 537136 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC AVU43817 537133 537699 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC AWB10_02815 AVU43818 537720 538706 - arabinose_5-phosphate_isomerase_KdsD AWB10_02820 AVU43819 538720 539697 - calcium/sodium_antiporter AWB10_02825 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AVU43801 92 701 107.449856734 0.0 PJR32596.1 AVU43799 97 508 100.0 6e-179 PJR32597.1 AVU43798 99 456 100.0 1e-160 PJR32598.1 AVU43797 99 990 100.0 0.0 PJR32600.1 AVU43795 100 537 100.0 0.0 >> 232. CP031105_0 Source: Escherichia coli strain AMSCJX02 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3188 Table of genes, locations, strands and annotations of subject cluster: AXF69693 1778294 1779280 + arabinose_5-phosphate_isomerase_KdsD DUT84_09240 AXF69694 1779301 1779867 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC DUT84_09245 AXF69695 1779864 1780439 + LPS_export_ABC_transporter_periplasmic_protein LptC DUT84_09250 AXF69696 1780408 1780965 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA DUT84_09255 AXF69697 1780972 1781697 + ABC_transporter_ATP-binding_protein DUT84_09260 AXF69698 1781745 1783178 + RNA_polymerase_sigma-54_factor DUT84_09265 AXF69699 1783201 1783488 + ribosome_hibernation_promoting_factor DUT84_09270 AXF69700 1783606 1784097 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN DUT84_09275 AXF69701 1784143 1784997 + RNase_adaptor_protein_RapZ DUT84_09280 AXF69702 1784994 1785266 + phosphocarrier_protein_NPr DUT84_09285 AXF69703 1785480 1786112 + PhoP_regulatory_network_protein_YrbL DUT84_09290 AXF69704 1786109 1786837 - monofunctional_biosynthetic_peptidoglycan transglycosylase DUT84_09295 AXF69705 1786834 1787487 - glutamine_amidotransferase DUT84_09300 AXF69706 1787717 1790053 - hybrid_sensor_histidine_kinase/response regulator DUT84_09305 AXF72510 1790149 1791078 - TIGR01212_family_radical_SAM_protein DUT84_09310 AXF69707 1791470 1791706 - hypothetical_protein DUT84_09315 DUT84_09320 1791604 1791830 - hypothetical_protein no_locus_tag AXF69708 1791753 1796213 + glutamate_synthase_large_subunit DUT84_09325 AXF69709 1796226 1797644 + glutamate_synthase_small_subunit DUT84_09330 AXF69710 1797828 1798955 + DUF1016_domain-containing_protein DUT84_09335 AXF69711 1799015 1799479 - YhcH/YjgK/YiaL_family_protein DUT84_09340 AXF69712 1799476 1800351 - ROK_family_protein DUT84_09345 AXF69713 1800348 1801037 - N-acetylmannosamine-6-phosphate_2-epimerase DUT84_09350 AXF69714 1801085 1802575 - MFS_transporter DUT84_09355 AXF69715 1802685 1803578 - N-acetylneuraminate_lyase nanA AXF69716 1803700 1804491 - transcriptional_regulator_NanR DUT84_09365 DUT84_09370 1804761 1804871 - transposase no_locus_tag AXF69717 1804871 1806193 + C4-dicarboxylate_transporter_DcuC DUT84_09375 AXF69718 1806236 1806733 - stringent_starvation_protein_B DUT84_09380 AXF69719 1806739 1807377 - stringent_starvation_protein_A DUT84_09385 AXF69720 1807319 1807528 + hypothetical_protein DUT84_09390 AXF72511 1807480 1807659 - hypothetical_protein DUT84_09395 AXF69721 1807633 1807854 + hypothetical_protein DUT84_09400 AXF69722 1807772 1808164 - 30S_ribosomal_protein_S9 DUT84_09405 AXF69723 1808180 1808608 - 50S_ribosomal_protein_L13 DUT84_09410 AXF69724 1808827 1809954 - cell_division_protein_ZapE DUT84_09415 AXF69725 1810148 1810546 + DUF1043_family_protein DUT84_09420 AXF69726 1810700 1812067 + periplasmic_pH-dependent_serine_endoprotease DegQ DUT84_09425 AXF69727 1812157 1813224 + serine_endoprotease_DegS DUT84_09430 AXF69728 1813286 1814224 - malate_dehydrogenase DUT84_09435 AXF69729 1814659 1815129 + transcriptional_regulator_ArgR DUT84_09440 AXF69730 1815494 1815757 + DUF1471_domain-containing_protein DUT84_09445 AXF69731 1815813 1816085 - hypothetical_protein DUT84_09450 AXF69732 1816177 1818144 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DUT84_09455 AXF69733 1818150 1819082 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DUT84_09460 AXF69734 1819090 1819293 - protein_AaeX DUT84_09465 AXF69735 1819476 1820405 + HTH-type_transcriptional_activator_AaeR DUT84_09470 AXF69736 1820533 1821978 - metalloprotease_TldD DUT84_09475 AXF69737 1822134 1825934 - AsmA2_domain-containing_protein DUT84_09480 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AXF69710 91 697 107.449856734 0.0 PJR32596.1 AXF69712 97 509 100.0 2e-179 PJR32597.1 AXF69713 99 456 100.0 1e-160 PJR32598.1 AXF69714 99 990 100.0 0.0 PJR32600.1 AXF69716 99 536 100.0 0.0 >> 233. CP034784_0 Source: Escherichia coli strain ECZP248 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3173 Table of genes, locations, strands and annotations of subject cluster: AZV98658 495377 496822 + metalloprotease_TldD tldD AZV98659 496956 497885 - HTH-type_transcriptional_activator_AaeR aaeR AZV98660 498068 498271 + DUF1656_domain-containing_protein ENE68_02400 AZV98661 498279 499211 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AZV98662 499217 501184 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AZV98663 501276 501548 + hypothetical_protein ENE68_02415 AZV98664 501604 501867 - DUF1471_domain-containing_protein ENE68_02420 AZV98665 502232 502702 - transcriptional_regulator_ArgR argR AZV98666 503137 504075 + malate_dehydrogenase ENE68_02430 AZV98667 504138 505205 - serine_endoprotease_DegS degS AZV98668 505295 506662 - serine_endoprotease_DegQ degQ AZV98669 506816 507214 - DUF1043_family_protein ENE68_02445 AZV98670 507408 508535 + cell_division_protein_ZapE zapE AZV98671 508754 509182 + 50S_ribosomal_protein_L13 ENE68_02455 AZV98672 509198 509590 + 30S_ribosomal_protein_S9 ENE68_02460 AZV98673 509985 510623 + stringent_starvation_protein_A ENE68_02465 AZV98674 510629 511126 + ClpXP_protease_specificity-enhancing_factor ENE68_02470 AZV98675 511168 512535 - C4-dicarboxylate_transporter_DcuC dcuC AZV98676 512915 513706 + transcriptional_regulator_NanR ENE68_02480 AZV98677 513828 514721 + N-acetylneuraminate_lyase nanA AZV98678 514831 516321 + MFS_transporter ENE68_02490 AZV98679 516369 517058 + N-acetylmannosamine-6-phosphate_2-epimerase ENE68_02495 AZV98680 517055 517930 + N-acetylmannosamine_kinase ENE68_02500 AZV98681 517927 518391 + YhcH/YjgK/YiaL_family_protein ENE68_02505 AZV98682 518451 519578 - DUF1016_domain-containing_protein ENE68_02510 ENE68_02515 519763 520191 - DUF1120_domain-containing_protein no_locus_tag ENE68_02520 520249 520946 + IS1-like_element_IS1A_family_transposase no_locus_tag AZV98683 521590 523008 - glutamate_synthase ENE68_02525 AZV98684 523021 527481 - glutamate_synthase_subunit_alpha ENE68_02530 AZV98685 528156 529085 + TIGR01212_family_radical_SAM_protein ENE68_02535 AZV98686 529181 531517 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB AZV98687 531747 532400 + isoprenoid_biosynthesis_protein_ElbB elbB AZV98688 532397 533125 + monofunctional_biosynthetic_peptidoglycan transglycosylase ENE68_02550 AZV98689 533122 533754 - PhoP_regulatory_network_protein_YrbL yrbL AZV98690 533968 534240 - PTS_phosphocarrier_protein_NPr ENE68_02560 AZV98691 534237 535091 - RNase_adaptor_protein_RapZ ENE68_02565 AZV98692 535137 535628 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN AZV98693 535746 536033 - ribosome_hibernation_promoting_factor ENE68_02575 AZV98694 536056 537489 - RNA_polymerase_factor_sigma-54 ENE68_02580 AZV98695 537537 538262 - lipopolysaccharide_ABC_transporter_ATP-binding protein ENE68_02585 AZV98696 538269 538826 - LPS_ABC_transporter_substrate-binding_protein LptA ENE68_02590 AZV98697 538795 539370 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC AZV98698 539367 539933 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AZV98682 90 684 107.449856734 0.0 PJR32596.1 AZV98680 97 507 100.0 1e-178 PJR32597.1 AZV98679 99 456 100.0 1e-160 PJR32598.1 AZV98678 99 990 100.0 0.0 PJR32600.1 AZV98676 99 536 100.0 0.0 >> 234. CP041747_0 Source: Escherichia coli strain NCCP 15739 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 3141 Table of genes, locations, strands and annotations of subject cluster: QHG44240 2497560 2498546 + arabinose-5-phosphate_isomerase_KdsD kdsD QHG44241 2498567 2499133 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHG44242 2499130 2499705 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHG44243 2499674 2500231 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHG44244 2500238 2500963 + LPS_export_ABC_transporter_ATP-binding_protein lptB QHG44245 2501011 2502444 + RNA_polymerase_factor_sigma-54 rpoN QHG44246 2502467 2502754 + ribosome_hibernation_promoting_factor FOV74_13120 QHG44247 2502872 2503363 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHG44248 2503409 2504263 + RNase_adapter_RapZ rapZ QHG44249 2504260 2504532 + PTS_phosphocarrier_protein_NPr npr QHG44250 2504746 2505378 + PhoP_regulatory_network_protein_YrbL yrbL QHG44251 2505375 2506103 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHG44252 2506100 2506753 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHG44253 2506983 2509319 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHG44254 2509415 2510344 - TIGR01212_family_radical_SAM_protein FOV74_13160 QHG46855 2511018 2515478 + glutamate_synthase_large_subunit gltB QHG44255 2515491 2516909 + glutamate_synthase_small_subunit FOV74_13170 QHG44256 2517093 2518142 + DUF1016_domain-containing_protein FOV74_13175 QHG44257 2518202 2518666 - DUF386_domain-containing_protein FOV74_13180 QHG44258 2518663 2519538 - N-acetylmannosamine_kinase FOV74_13185 FOV74_13190 2519535 2520223 - N-acetylmannosamine-6-phosphate_2-epimerase no_locus_tag QHG44259 2520271 2521761 - sialic_acid_transporter_NanT nanT QHG44260 2521870 2522763 - N-acetylneuraminate_lyase nanA QHG44261 2522885 2523676 - transcriptional_regulator_NanR nanR QHG44262 2524056 2525420 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHG44263 2525455 2525952 - ClpXP_protease_specificity-enhancing_factor sspB QHG44264 2525958 2526596 - stringent_starvation_protein_A sspA QHG44265 2526852 2527073 + hypothetical_protein FOV74_13225 QHG44266 2526991 2527383 - 30S_ribosomal_protein_S9 rpsI QHG44267 2527399 2527827 - 50S_ribosomal_protein_L13 rplM QHG44268 2528045 2529172 - cell_division_protein_ZapE FOV74_13240 QHG44269 2529366 2529764 + DUF1043_family_protein FOV74_13245 QHG44270 2531374 2532441 + serine_endoprotease_DegS FOV74_13255 QHG44271 2532505 2533443 - malate_dehydrogenase mdh QHG44272 2533878 2534348 + transcriptional_regulator_ArgR argR QHG44273 2534712 2534975 + peroxide/acid_stress_response_protein_YhcN yhcN QHG44274 2535031 2535303 - hypothetical_protein FOV74_13275 QHG44275 2535395 2537362 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHG44276 2537368 2538297 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHG44277 2538305 2538508 - DUF1656_domain-containing_protein FOV74_13290 QHG44278 2538691 2539620 + HTH-type_transcriptional_activator_AaeR aaeR QHG44279 2539754 2541199 - metalloprotease_TldD tldD QHG44280 2541355 2545155 - AsmA2_domain-containing_protein FOV74_13305 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHG44256 100 723 100.0 0.0 PJR32595.1 QHG44257 100 318 100.0 6e-109 PJR32596.1 QHG44258 100 570 100.0 0.0 PJR32598.1 QHG44259 100 993 100.0 0.0 PJR32600.1 QHG44261 100 537 100.0 0.0 >> 235. CP043754_0 Source: Escherichia coli strain CVM N56338 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2995 Table of genes, locations, strands and annotations of subject cluster: QEP64092 533251 534696 + metalloprotease_TldD tldD QEP64093 534830 535759 - HTH-type_transcriptional_activator_AaeR aaeR QEP64094 535942 536145 + DUF1656_domain-containing_protein F1L17_02610 QEP64095 536153 537085 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QEP64096 537091 539058 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QEP64097 539150 539422 + hypothetical_protein F1L17_02625 QEP64098 539478 539741 - peroxide/acid_stress_response_protein_YhcN yhcN QEP64099 540106 540576 - transcriptional_regulator_ArgR argR QEP64100 541011 541949 + malate_dehydrogenase mdh QEP64101 542012 543079 - serine_endoprotease_DegS F1L17_02645 QEP64102 543169 544536 - serine_endoprotease_DegQ degQ QEP64103 544690 545088 - DUF1043_family_protein F1L17_02655 QEP64104 545282 546409 + cell_division_protein_ZapE F1L17_02660 QEP64105 546628 547056 + 50S_ribosomal_protein_L13 rplM QEP64106 547072 547464 + 30S_ribosomal_protein_S9 rpsI QEP64107 547382 547603 - hypothetical_protein F1L17_02675 QEP64108 547859 548497 + stringent_starvation_protein_A sspA QEP64109 548503 549000 + ClpXP_protease_specificity-enhancing_factor sspB QEP64110 549043 550410 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QEP64111 550790 551581 + transcriptional_regulator_NanR nanR QEP64112 551703 552596 + N-acetylneuraminate_lyase nanA QEP64113 552705 554195 + sialic_acid_transporter_NanT nanT QEP64114 554243 554932 + N-acetylmannosamine-6-phosphate_2-epimerase F1L17_02710 QEP64115 554929 555804 + N-acetylmannosamine_kinase F1L17_02715 QEP64116 555801 556265 + DUF386_domain-containing_protein F1L17_02720 QEP64117 556325 557452 - DUF1016_domain-containing_protein F1L17_02725 QEP64118 557636 559054 - glutamate_synthase F1L17_02730 QEP67933 559067 563527 - glutamate_synthase_large_subunit gltB QEP64119 564202 565131 + TIGR01212_family_radical_SAM_protein F1L17_02740 QEP64120 565227 567563 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QEP64121 567793 568446 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QEP64122 568443 569171 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QEP64123 569168 569800 - PhoP_regulatory_network_protein_YrbL yrbL QEP64124 570014 570286 - PTS_phosphocarrier_protein_NPr npr QEP64125 570283 571137 - RNase_adapter_RapZ rapZ QEP64126 571183 571674 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QEP64127 571792 572079 - ribosome_hibernation_promoting_factor F1L17_02780 QEP64128 572102 573535 - RNA_polymerase_factor_sigma-54 rpoN QEP64129 573583 574308 - LPS_export_ABC_transporter_ATP-binding_protein lptB QEP64130 574315 574872 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QEP64131 574841 575416 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QEP64132 575413 575979 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QEP64133 576000 576986 - arabinose-5-phosphate_isomerase_KdsD kdsD QEP64134 577000 577977 - calcium/sodium_antiporter F1L17_02815 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QEP64117 92 701 107.449856734 0.0 PJR32595.1 QEP64116 98 311 100.0 7e-106 PJR32597.1 QEP64114 99 456 100.0 1e-160 PJR32598.1 QEP64113 99 990 100.0 0.0 PJR32600.1 QEP64111 100 537 100.0 0.0 >> 236. CP043487_0 Source: Escherichia coli strain AQ15 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2995 Table of genes, locations, strands and annotations of subject cluster: QGJ57629 3439009 3439995 + arabinose-5-phosphate_isomerase_KdsD kdsD QGJ57630 3440016 3440582 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QGJ57631 3440579 3441154 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QGJ57632 3441123 3441680 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QGJ57633 3441687 3442412 + LPS_export_ABC_transporter_ATP-binding_protein lptB QGJ57634 3442460 3443893 + RNA_polymerase_factor_sigma-54 rpoN QGJ57635 3443916 3444203 + ribosome_hibernation_promoting_factor FQT78_16865 QGJ57636 3444321 3444812 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QGJ57637 3444858 3445712 + RNase_adapter_RapZ rapZ QGJ57638 3445709 3445981 + PTS_phosphocarrier_protein_NPr npr QGJ57639 3446195 3446827 + PhoP_regulatory_network_protein_YrbL yrbL QGJ57640 3446824 3447552 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QGJ57641 3447549 3448202 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QGJ57642 3448432 3450768 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QGJ58895 3450864 3451793 - TIGR01212_family_radical_SAM_protein FQT78_16905 QGJ58896 3452468 3456928 + glutamate_synthase_large_subunit gltB QGJ57643 3456941 3458359 + glutamate_synthase FQT78_16915 QGJ57644 3458543 3459670 + DUF1016_domain-containing_protein FQT78_16920 QGJ57645 3459730 3460194 - DUF386_domain-containing_protein FQT78_16925 QGJ57646 3460191 3461066 - N-acetylmannosamine_kinase FQT78_16930 QGJ57647 3461063 3461752 - N-acetylmannosamine-6-phosphate_2-epimerase FQT78_16935 QGJ57648 3461800 3463290 - sialic_acid_transporter_NanT nanT QGJ57649 3463399 3464292 - N-acetylneuraminate_lyase nanA QGJ57650 3464414 3465205 - transcriptional_regulator_NanR nanR QGJ57651 3465585 3466952 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QGJ57652 3466995 3467492 - ClpXP_protease_specificity-enhancing_factor sspB QGJ57653 3467498 3468136 - stringent_starvation_protein_A sspA QGJ57654 3468392 3468613 + hypothetical_protein FQT78_16970 QGJ57655 3468531 3468923 - 30S_ribosomal_protein_S9 rpsI QGJ57656 3468939 3469367 - 50S_ribosomal_protein_L13 rplM QGJ57657 3469586 3470713 - cell_division_protein_ZapE FQT78_16985 QGJ57658 3470907 3471305 + DUF1043_family_protein FQT78_16990 QGJ57659 3471459 3472826 + serine_endoprotease_DegQ degQ QGJ57660 3472916 3473983 + serine_endoprotease_DegS FQT78_17000 QGJ57661 3474046 3474984 - malate_dehydrogenase mdh QGJ57662 3475419 3475889 + transcriptional_regulator_ArgR argR QGJ57663 3476254 3476517 + peroxide/acid_stress_response_protein_YhcN yhcN QGJ57664 3476573 3476845 - hypothetical_protein FQT78_17020 QGJ57665 3476937 3478904 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QGJ57666 3478910 3479842 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QGJ57667 3479850 3480053 - DUF1656_domain-containing_protein FQT78_17035 QGJ57668 3480236 3481165 + HTH-type_transcriptional_activator_AaeR aaeR QGJ57669 3481299 3482744 - metalloprotease_TldD tldD QGJ57670 3483083 3486883 - AsmA2_domain-containing_protein FQT78_17050 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QGJ57644 92 701 107.449856734 0.0 PJR32595.1 QGJ57645 98 311 100.0 7e-106 PJR32597.1 QGJ57647 99 456 100.0 1e-160 PJR32598.1 QGJ57648 99 990 100.0 0.0 PJR32600.1 QGJ57650 100 537 100.0 0.0 >> 237. CP043486_0 Source: Escherichia coli strain SL112 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2995 Table of genes, locations, strands and annotations of subject cluster: QGJ61976 3424643 3425629 + arabinose-5-phosphate_isomerase_KdsD kdsD QGJ61977 3425650 3426216 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QGJ61978 3426213 3426788 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QGJ61979 3426757 3427314 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QGJ61980 3427321 3428046 + LPS_export_ABC_transporter_ATP-binding_protein lptB QGJ61981 3428094 3429527 + RNA_polymerase_factor_sigma-54 rpoN QGJ61982 3429550 3429837 + ribosome_hibernation_promoting_factor FQT94_16815 QGJ61983 3429955 3430446 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QGJ61984 3430492 3431346 + RNase_adapter_RapZ rapZ QGJ61985 3431343 3431615 + PTS_phosphocarrier_protein_NPr npr QGJ61986 3431829 3432461 + PhoP_regulatory_network_protein_YrbL yrbL QGJ61987 3432458 3433186 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QGJ61988 3433183 3433836 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QGJ61989 3434066 3436402 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QGJ61990 3436498 3437427 - TIGR01212_family_radical_SAM_protein FQT94_16855 QGJ63286 3438102 3442562 + glutamate_synthase_large_subunit gltB QGJ61991 3442575 3443993 + glutamate_synthase FQT94_16865 QGJ61992 3444177 3445304 + DUF1016_domain-containing_protein FQT94_16870 QGJ61993 3445364 3445828 - DUF386_domain-containing_protein FQT94_16875 QGJ61994 3445825 3446700 - N-acetylmannosamine_kinase FQT94_16880 QGJ61995 3446697 3447386 - N-acetylmannosamine-6-phosphate_2-epimerase FQT94_16885 QGJ61996 3447434 3448924 - sialic_acid_transporter_NanT nanT QGJ61997 3449033 3449926 - N-acetylneuraminate_lyase nanA QGJ61998 3450048 3450839 - transcriptional_regulator_NanR nanR QGJ61999 3451219 3452586 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QGJ62000 3452629 3453126 - ClpXP_protease_specificity-enhancing_factor sspB QGJ62001 3453132 3453770 - stringent_starvation_protein_A sspA QGJ62002 3454026 3454247 + hypothetical_protein FQT94_16920 QGJ62003 3454165 3454557 - 30S_ribosomal_protein_S9 rpsI QGJ62004 3454573 3455001 - 50S_ribosomal_protein_L13 rplM QGJ62005 3455220 3456347 - cell_division_protein_ZapE FQT94_16935 QGJ62006 3456541 3456939 + DUF1043_family_protein FQT94_16940 QGJ62007 3457093 3458460 + serine_endoprotease_DegQ degQ QGJ62008 3458550 3459617 + serine_endoprotease_DegS FQT94_16950 QGJ62009 3459680 3460618 - malate_dehydrogenase mdh QGJ62010 3461053 3461523 + transcriptional_regulator_ArgR argR QGJ62011 3461888 3462151 + peroxide/acid_stress_response_protein_YhcN yhcN QGJ62012 3462207 3462479 - hypothetical_protein FQT94_16970 QGJ62013 3462571 3464538 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QGJ62014 3464544 3465476 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QGJ62015 3465484 3465687 - DUF1656_domain-containing_protein FQT94_16985 QGJ62016 3465870 3466799 + HTH-type_transcriptional_activator_AaeR aaeR QGJ62017 3466933 3468378 - metalloprotease_TldD tldD QGJ62018 3468717 3472517 - AsmA2_domain-containing_protein FQT94_17000 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QGJ61992 92 701 107.449856734 0.0 PJR32595.1 QGJ61993 98 311 100.0 7e-106 PJR32597.1 QGJ61995 99 456 100.0 1e-160 PJR32598.1 QGJ61996 99 990 100.0 0.0 PJR32600.1 QGJ61998 100 537 100.0 0.0 >> 238. CP002185_0 Source: Escherichia coli W, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2995 Table of genes, locations, strands and annotations of subject cluster: ADT76830 3561252 3562238 + D-arabinose_5-phosphate_isomerase kdsD ADT76831 3562259 3562825 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC ADT76832 3562822 3563397 + transporter_subunit lptC ADT76833 3563366 3563923 + periplasmic_LPS-binding_protein lptA ADT76834 3563930 3564655 + transporter_subunit:_ATP-binding_component_of ABC superfamily lptB ADT76835 3564703 3566136 + RNA_polymerase,_sigma_54_(sigma_N)_factor rpoN ADT76836 3566159 3566446 + predicted_ribosome-associated,_sigma_54 modulation protein hpf ADT76837 3566564 3567055 + sugar-specific_enzyme_IIA_component_of_PTS ptsN ADT76838 3567101 3567955 + predicted_protein_with_nucleoside_triphosphate hydrolase domain yhbJ ADT76839 3567952 3568224 + phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system npr ADT76840 3568438 3569070 + hypothetical_protein yrbL ADT76841 3569067 3569795 - biosynthetic_peptidoglycan_transglycosylase mtgA ADT76842 3569792 3570445 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB ADT76843 3570675 3573011 - hybrid_sensory_histidine_kinase_in_two-component regulatory system with ArcA arcB ADT76844 3573107 3574036 - predicted_Fe-S_oxidoreductase yhcC ADT76845 3574618 3579171 + glutamate_synthase,_large_subunit gltB ADT76846 3579184 3580602 + glutamate_synthase,_4Fe-4S_protein,_small subunit gltD ADT76847 3580786 3581913 + conserved_protein yhcG ADT76848 3581973 3582437 - Beta-galactosidase,_beta_subunit yhcH ADT76849 3582434 3583309 - predicted_N-acetylmannosamine_kinase nanK ADT76850 3583306 3583995 - predicted_N-acetylmannosamine-6-P_epimerase nanE ADT76851 3584043 3585533 - sialic_acid_transporter nanT ADT76852 3585642 3586535 - N-acetylneuraminate_lyase nanA ADT76853 3586657 3587448 - DNA-binding_transcriptional_dual_regulator nanR ADT76854 3587828 3589195 + predicted_transporter dcuD ADT76855 3589238 3589735 - ClpXP_protease_specificity-enhancing_factor sspB ADT76856 3589741 3590379 - stringent_starvation_protein_A sspA ADT76857 3590774 3591166 - 30S_ribosomal_subunit_protein_S9 rpsI ADT76858 3591182 3591610 - 50S_ribosomal_subunit_protein_L13 rplM ADT76859 3591829 3592956 - conserved_protein_with_nucleoside_triphosphate hydrolase domain yhcM ADT76860 3593150 3593548 + conserved_protein yhcB ADT76861 3593702 3595069 + serine_endoprotease,_periplasmic degQ ADT76862 3595159 3596226 + serine_endoprotease,_periplasmic degS ADT76863 3596289 3597227 - malate_dehydrogenase,_NAD(P)-binding_protein mdh ADT76864 3597662 3598132 + DNA-binding_protein_transcriptional_dual regulator, L-arginine-binding protein argR ADT76865 3598497 3598760 + conserved_protein yhcN ADT76866 3598816 3599088 - predicted_barnase_inhibitor yhcO ADT76867 3599180 3601147 - p-hydroxybenzoic_acid_efflux_system_component aaeB ADT76868 3601153 3602085 - p-hydroxybenzoic_acid_efflux_system_component aaeA ADT76869 3602093 3602296 - membrane_protein_of_efflux_system aaeX ADT76870 3602479 3603408 + predicted_DNA-binding_transcriptional_regulator, efflux system aaeR ADT76871 3603542 3604987 - predicted_peptidase tldD ADT76872 3605417 3609217 - conserved_membrane_protein,_predicted transporter yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ADT76847 92 701 107.449856734 0.0 PJR32595.1 ADT76848 98 311 100.0 7e-106 PJR32597.1 ADT76850 99 456 100.0 1e-160 PJR32598.1 ADT76851 99 990 100.0 0.0 PJR32600.1 ADT76853 100 537 100.0 0.0 >> 239. CP035312_0 Source: Escherichia coli strain D72 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2908 Table of genes, locations, strands and annotations of subject cluster: QBJ99360 506813 508258 + metalloprotease_TldD tldD QBJ99361 508392 509321 - HTH-type_transcriptional_activator_AaeR aaeR QBJ99362 509504 509707 + DUF1656_domain-containing_protein ERL60_02470 QBJ99363 509715 510647 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QBJ99364 510653 512620 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QBJ99365 512712 512984 + hypothetical_protein ERL60_02485 QBJ99366 513040 513303 - peroxide/acid_stress_response_protein_YhcN yhcN QBJ99367 513668 514138 - transcriptional_regulator_ArgR argR QBJ99368 514573 515511 + malate_dehydrogenase ERL60_02500 QBJ99369 515574 516641 - serine_endoprotease_DegS degS QBJ99370 516731 518098 - serine_endoprotease_DegQ degQ QBJ99371 518252 518650 - DUF1043_family_protein ERL60_02515 QBJ99372 518844 519971 + cell_division_protein_ZapE zapE QBJ99373 520190 520618 + 50S_ribosomal_protein_L13 ERL60_02525 QBJ99374 520634 521026 + 30S_ribosomal_protein_S9 ERL60_02530 QBJ99375 521421 522059 + stringent_starvation_protein_A ERL60_02535 QBJ99376 522065 522562 + ClpXP_protease_specificity-enhancing_factor sspB QBJ99377 522604 523971 - C4-dicarboxylate_transporter_DcuC dcuC QBJ99378 524351 525142 + transcriptional_regulator_NanR ERL60_02550 nanR 525162 525659 + transcriptional_regulator_NanR no_locus_tag QBJ99379 525781 526674 + N-acetylneuraminate_lyase nanA QBJ99380 526783 528273 + MFS_transporter ERL60_02565 QBJ99381 528321 529010 + N-acetylmannosamine-6-phosphate_2-epimerase ERL60_02570 QBJ99382 529007 529882 + ROK_family_protein ERL60_02575 QBJ99383 529879 530343 + YhcH/YjgK/YiaL_family_protein ERL60_02580 QBJ99384 530419 530724 - transposase ERL60_02585 QBJ99385 530741 531220 - DUF1016_family_protein ERL60_02590 QBJ99386 531404 532822 - glutamate_synthase ERL60_02595 QBJ99387 532835 537295 - glutamate_synthase_large_subunit gltB QBJ99388 537970 538899 + TIGR01212_family_radical_SAM_protein ERL60_02605 QBJ99389 538995 541331 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QBJ99390 541561 542214 + isoprenoid_biosynthesis_protein_ElbB elbB QBJ99391 542211 542939 + monofunctional_biosynthetic_peptidoglycan transglycosylase ERL60_02620 QBJ99392 542936 543568 - PhoP_regulatory_network_protein_YrbL yrbL QBJ99393 543781 544053 - PTS_phosphocarrier_protein_NPr ERL60_02630 QBJ99394 544050 544904 - RNase_adapter_RapZ rapZ QBJ99395 544950 545441 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QBJ99396 545559 545846 - ribosome_hibernation_promoting_factor ERL60_02645 QBJ99397 545869 547302 - RNA_polymerase_factor_sigma-54 ERL60_02650 QBJ99398 547350 548075 - lipopolysaccharide_ABC_transporter_ATP-binding protein ERL60_02655 QBJ99399 548082 548639 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QBJ99400 548608 549183 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QBJ99401 549180 549746 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QBJ99402 549767 550753 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QBJ99383 98 314 100.0 3e-107 PJR32597.1 QBJ99381 99 456 100.0 1e-160 PJR32598.1 QBJ99380 99 990 100.0 0.0 PJR32599.1 QBJ99379 100 611 100.0 0.0 PJR32600.1 QBJ99378 100 537 100.0 0.0 >> 240. LR134226_0 Source: Escherichia coli strain NCTC9088 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2814 Table of genes, locations, strands and annotations of subject cluster: VEC50847 484201 485646 + TldD_protein tldD VEC50850 485774 486703 - LysR_family_transcriptional_regulator aaeR VEC50853 486886 487089 + protein_AaeX aaeX VEC50856 487097 488029 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VEC50859 488035 490002 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VEC50861 490094 490366 + barnase_inhibitor yhcO VEC50864 490422 490685 - protein_YcfR ycfR VEC50867 491050 491520 - arginine_repressor argR VEC50869 491955 492893 + malate_dehydrogenase mdh VEC50871 492955 494022 - protease degS VEC50874 494112 495479 - serine_endoprotease degQ VEC50876 495633 496031 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VEC50878 496225 497352 + putative_ATP/GTP-binding_protein yhcM VEC50882 497571 497999 + 50S_ribosomal_protein_L13 rplM VEC50885 498015 498407 + 30S_ribosomal_protein_S9 rpsI VEC50888 498802 499440 + stringent_starvation_protein_A sspA VEC50891 499446 499943 + stringent_starvation_protein_B sspB VEC50894 499986 501353 - C4-dicarboxylate_transporter dcuD VEC50897 501733 502524 + GntR_family_transcriptional_regulator nanR VEC50900 502646 503539 + N-acetylneuraminate_lyase nanA VEC50903 503648 505138 + sialic_acid_transporter nanT VEC50906 505186 505875 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VEC50909 505872 506747 + putative_transcriptional_regulator nanK VEC50912 506744 507208 + beta-galactosidase yhcH VEC50915 507268 508395 - protein yhcG VEC50918 508579 509997 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VEC50921 510010 514563 - glutamate_synthase_subunit_alpha gltB VEC50926 515145 516074 + putative_radical_SAM_protein NCTC9088_00505 VEC50929 516170 518506 + aerobic_respiration_control_protein arcB VEC50932 518736 519389 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VEC50935 519386 520114 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VEC50938 520111 520743 - protein yrbL VEC50941 520957 521229 - phosphocarrier_protein ptsO VEC50944 521226 522080 - putative_ATPase yhbJ VEC50947 522126 522617 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN VEC50950 522735 523022 - putative_sigma(54)_modulation_protein yhbH VEC50953 523045 524478 - RNA_polymerase_sigma-54_factor_(sigma-N) rpoN VEC50956 524526 525251 - lipopolysaccharide_ABC_transporter lptB VEC50959 525258 525815 - lipopolysaccharide_transport_periplasmic_protein LptA yhbN VEC50960 525784 526359 - putative_organic_solvent_tolerance_protein lptC VEC50963 526356 526922 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC VEC50966 526943 527929 - D-arabinose_5-phosphate_isomerase kdsD VEC50969 527943 528920 - calcium/sodium:proton_antiporter yrbG Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VEC50915 92 701 107.449856734 0.0 PJR32596.1 VEC50909 97 509 100.0 2e-179 PJR32597.1 VEC50906 99 456 100.0 1e-160 PJR32599.1 VEC50900 100 611 100.0 0.0 PJR32600.1 VEC50897 100 537 100.0 0.0 >> 241. CP048326_0 Source: Escherichia coli strain 61 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2813 Table of genes, locations, strands and annotations of subject cluster: QHW57709 514849 516294 + metalloprotease_TldD tldD QHW57710 516422 517351 - HTH-type_transcriptional_activator_AaeR aaeR QHW57711 517534 517737 + AaeX_family_protein GZS14_02465 QHW57712 517745 518677 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHW57713 518683 520650 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHW57714 520742 521014 + hypothetical_protein GZS14_02480 QHW57715 521070 521333 - peroxide/acid_stress_response_protein_YhcN yhcN QHW57716 521698 522168 - transcriptional_regulator_ArgR argR QHW57717 522603 523541 + malate_dehydrogenase mdh QHW57718 523604 524671 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QHW57719 524761 526128 - serine_endoprotease_DegQ degQ QHW57720 526282 526680 - DUF1043_family_protein GZS14_02510 QHW57721 526874 528001 + cell_division_protein_ZapE GZS14_02515 QHW57722 528220 528648 + 50S_ribosomal_protein_L13 rplM QHW57723 528664 529056 + 30S_ribosomal_protein_S9 rpsI QHW57724 529451 530089 + stringent_starvation_protein_A sspA QHW57725 530095 530592 + ClpXP_protease_specificity-enhancing_factor sspB QHW57726 530635 532002 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHW57727 532382 533173 + transcriptional_regulator_NanR nanR QHW57728 533295 534188 + N-acetylneuraminate_lyase nanA QHW57729 534297 535787 + sialic_acid_transporter_NanT nanT QHW57730 535835 536524 + N-acetylmannosamine-6-phosphate_2-epimerase GZS14_02560 QHW61378 536521 537396 + N-acetylmannosamine_kinase GZS14_02565 QHW57731 537393 537857 + DUF386_domain-containing_protein GZS14_02570 QHW57732 537917 539044 - DUF1016_domain-containing_protein GZS14_02575 QHW57733 539228 540646 - glutamate_synthase GZS14_02580 QHW61379 540659 545119 - glutamate_synthase_large_subunit gltB QHW57734 545794 546723 + TIGR01212_family_radical_SAM_protein GZS14_02590 QHW57735 546819 549155 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHW57736 549385 550038 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHW57737 550035 550763 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHW57738 550760 551392 - PhoP_regulatory_network_protein_YrbL yrbL QHW57739 551606 551878 - PTS_phosphocarrier_protein_NPr npr QHW57740 551875 552729 - RNase_adapter_RapZ rapZ QHW57741 552775 553266 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHW57742 553384 553671 - ribosome_hibernation_promoting_factor hpf QHW57743 553694 555127 - RNA_polymerase_factor_sigma-54 rpoN QHW57744 555175 555900 - LPS_export_ABC_transporter_ATP-binding_protein lptB QHW57745 555907 556464 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHW57746 556433 557008 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHW57747 557005 557571 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHW57748 557592 558578 - arabinose-5-phosphate_isomerase_KdsD kdsD QHW57749 558592 559569 - calcium/sodium_antiporter GZS14_02665 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHW57732 92 701 107.449856734 0.0 PJR32596.1 QHW61378 97 509 100.0 2e-179 PJR32597.1 QHW57730 99 456 100.0 1e-160 PJR32599.1 QHW57728 100 611 100.0 0.0 PJR32600.1 QHW57727 99 536 100.0 0.0 >> 242. CP048322_0 Source: Escherichia coli strain 64 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2813 Table of genes, locations, strands and annotations of subject cluster: QHW48425 514849 516294 + metalloprotease_TldD tldD QHW48426 516422 517351 - HTH-type_transcriptional_activator_AaeR aaeR QHW48427 517534 517737 + AaeX_family_protein GZS15_02465 QHW48428 517745 518677 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHW48429 518683 520650 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHW48430 520742 521014 + hypothetical_protein GZS15_02480 QHW48431 521070 521333 - peroxide/acid_stress_response_protein_YhcN yhcN QHW48432 521698 522168 - transcriptional_regulator_ArgR argR QHW48433 522603 523541 + malate_dehydrogenase mdh QHW48434 523604 524671 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QHW48435 524761 526128 - serine_endoprotease_DegQ degQ QHW48436 526282 526680 - DUF1043_family_protein GZS15_02510 QHW48437 526874 528001 + cell_division_protein_ZapE GZS15_02515 QHW48438 528220 528648 + 50S_ribosomal_protein_L13 rplM QHW48439 528664 529056 + 30S_ribosomal_protein_S9 rpsI QHW48440 529451 530089 + stringent_starvation_protein_A sspA QHW48441 530095 530592 + ClpXP_protease_specificity-enhancing_factor sspB QHW48442 530635 532002 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHW48443 532382 533173 + transcriptional_regulator_NanR nanR QHW48444 533295 534188 + N-acetylneuraminate_lyase nanA QHW48445 534297 535787 + sialic_acid_transporter_NanT nanT QHW48446 535835 536524 + N-acetylmannosamine-6-phosphate_2-epimerase GZS15_02560 QHW52096 536521 537396 + N-acetylmannosamine_kinase GZS15_02565 QHW48447 537393 537857 + DUF386_domain-containing_protein GZS15_02570 QHW48448 537917 539044 - DUF1016_domain-containing_protein GZS15_02575 QHW48449 539228 540646 - glutamate_synthase GZS15_02580 QHW52097 540659 545119 - glutamate_synthase_large_subunit gltB QHW48450 545794 546723 + TIGR01212_family_radical_SAM_protein GZS15_02590 QHW48451 546819 549155 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHW48452 549385 550038 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHW48453 550035 550763 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHW48454 550760 551392 - PhoP_regulatory_network_protein_YrbL yrbL QHW48455 551606 551878 - PTS_phosphocarrier_protein_NPr npr QHW48456 551875 552729 - RNase_adapter_RapZ rapZ QHW48457 552775 553266 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHW48458 553384 553671 - ribosome_hibernation_promoting_factor hpf QHW48459 553694 555127 - RNA_polymerase_factor_sigma-54 rpoN QHW48460 555175 555900 - LPS_export_ABC_transporter_ATP-binding_protein lptB QHW48461 555907 556464 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHW48462 556433 557008 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHW48463 557005 557571 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHW48464 557592 558578 - arabinose-5-phosphate_isomerase_KdsD kdsD QHW48465 558592 559569 - calcium/sodium_antiporter GZS15_02665 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHW48448 92 701 107.449856734 0.0 PJR32596.1 QHW52096 97 509 100.0 2e-179 PJR32597.1 QHW48446 99 456 100.0 1e-160 PJR32599.1 QHW48444 100 611 100.0 0.0 PJR32600.1 QHW48443 99 536 100.0 0.0 >> 243. CP031546_0 Source: Escherichia coli strain cq9 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2812 Table of genes, locations, strands and annotations of subject cluster: AXO09110 4588312 4589298 + arabinose_5-phosphate_isomerase_KdsD DS732_23725 AXO09111 4589319 4589885 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC DS732_23730 AXO09112 4589882 4590457 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AXO09113 4590426 4590983 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA AXO09114 4590990 4591715 + ABC_transporter_ATP-binding_protein DS732_23745 AXO09115 4591763 4593196 + RNA_polymerase_sigma-54_factor DS732_23750 AXO09116 4593219 4593506 + ribosome_hibernation_promoting_factor DS732_23755 AXO09117 4593624 4594115 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN AXO09118 4594161 4595015 + RNase_adaptor_protein_RapZ DS732_23765 AXO09119 4595012 4595284 + phosphocarrier_protein_NPr DS732_23770 AXO09120 4596117 4596845 - monofunctional_biosynthetic_peptidoglycan transglycosylase DS732_23780 AXO09121 4596842 4597495 - glutamine_amidotransferase DS732_23785 AXO09122 4597725 4600061 - hybrid_sensor_histidine_kinase/response regulator DS732_23790 AXO09850 4600157 4601086 - TIGR01212_family_radical_SAM_protein DS732_23795 AXO09123 4601478 4601714 - hypothetical_protein DS732_23800 DS732_23805 4601612 4601838 - hypothetical_protein no_locus_tag AXO09124 4601761 4606221 + glutamate_synthase_large_subunit DS732_23810 AXO09125 4606234 4607652 + glutamate_synthase DS732_23815 AXO09126 4607836 4608963 + DUF1016_domain-containing_protein DS732_23820 AXO09127 4609023 4609487 - YhcH/YjgK/YiaL_family_protein DS732_23825 AXO09128 4609484 4610359 - ROK_family_protein DS732_23830 AXO09129 4610356 4611045 - N-acetylmannosamine-6-phosphate_2-epimerase DS732_23835 AXO09130 4611093 4612583 - MFS_transporter DS732_23840 AXO09131 4612692 4613585 - N-acetylneuraminate_lyase nanA AXO09132 4613707 4614498 - transcriptional_regulator_NanR DS732_23850 DS732_23855 4614768 4614878 - transposase no_locus_tag AXO09133 4614878 4616245 + C4-dicarboxylate_transporter_DcuC dcuC AXO09134 4616288 4616785 - stringent_starvation_protein_B DS732_23865 AXO09135 4616791 4617429 - stringent_starvation_protein_A DS732_23870 AXO09136 4617371 4617580 + hypothetical_protein DS732_23875 AXO09851 4617532 4617711 - hypothetical_protein DS732_23880 AXO09137 4617685 4617906 + hypothetical_protein DS732_23885 AXO09138 4617824 4618216 - 30S_ribosomal_protein_S9 DS732_23890 AXO09139 4618232 4618660 - 50S_ribosomal_protein_L13 DS732_23895 AXO09140 4618879 4620006 - cell_division_protein_ZapE zapE AXO09141 4620200 4620598 + DUF1043_family_protein DS732_23905 AXO09142 4620752 4622119 + periplasmic_pH-dependent_serine_endoprotease DegQ DS732_23910 AXO09143 4622209 4623276 + outer_membrane-stress_sensor_serine endopeptidase DegS DS732_23915 AXO09144 4623338 4624276 - malate_dehydrogenase DS732_23920 AXO09145 4624711 4625181 + transcriptional_regulator_ArgR argR AXO09146 4625546 4625809 + DUF1471_domain-containing_protein DS732_23930 AXO09147 4625865 4626137 - hypothetical_protein DS732_23935 AXO09148 4626229 4628196 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AXO09149 4628202 4629134 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AXO09150 4629142 4629345 - protein_AaeX DS732_23950 AXO09151 4629528 4630457 + HTH-type_transcriptional_activator_AaeR aaeR AXO09152 4630585 4632030 - metalloprotease_TldD tldD AXO09153 4632186 4635986 - AsmA2_domain-containing_protein DS732_23965 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AXO09126 92 701 107.449856734 0.0 PJR32596.1 AXO09128 97 508 100.0 6e-179 PJR32597.1 AXO09129 99 456 100.0 1e-160 PJR32599.1 AXO09131 100 611 100.0 0.0 PJR32600.1 AXO09132 99 536 100.0 0.0 >> 244. CP020520_0 Source: Escherichia coli strain 190 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2812 Table of genes, locations, strands and annotations of subject cluster: AVU64217 490904 492349 + metalloprotease_TldD A9X72_02570 AVU64218 492477 493406 - HTH-type_transcriptional_activator_AaeR A9X72_02575 AVU64219 493589 493792 + protein_AaeX A9X72_02580 AVU64220 493800 494732 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA A9X72_02585 AVU64221 494738 496705 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB A9X72_02590 AVU64222 496797 497069 + hypothetical_protein A9X72_02595 AVU64223 497125 497388 - hypothetical_protein A9X72_02600 AVU64224 497752 498222 - arginine_repressor A9X72_02605 AVU64225 498657 499595 + malate_dehydrogenase A9X72_02610 AVU64226 499657 500724 - outer_membrane-stress_sensor_serine endopeptidase DegS A9X72_02615 AVU64227 500814 502181 - periplasmic_pH-dependent_serine_endoprotease DegQ A9X72_02620 AVU64228 502335 502733 - hypothetical_protein A9X72_02625 AVU64229 502927 504054 + cell_division_protein_ZapE A9X72_02630 AVU64230 504273 504701 + 50S_ribosomal_protein_L13 A9X72_02635 AVU64231 504717 505109 + 30S_ribosomal_protein_S9 A9X72_02640 AVU64232 505027 505248 - hypothetical_protein A9X72_02645 AVU68314 505222 505401 + hypothetical_protein A9X72_02650 AVU68313 505353 505562 - hypothetical_protein A9X72_02655 AVU64233 505504 506142 + stringent_starvation_protein_A A9X72_02660 AVU64234 506148 506645 + stringent_starvation_protein_B A9X72_02665 AVU64235 506688 508055 - C4-dicarboxylate_transporter A9X72_02670 A9X72_02675 508055 508165 + transposase no_locus_tag AVU64236 508435 509226 + transcriptional_regulator_NanR A9X72_02680 AVU64237 509348 510241 + N-acetylneuraminate_lyase nanA AVU64238 510350 511840 + MFS_transporter A9X72_02690 AVU64239 511888 512577 + N-acetylmannosamine-6-phosphate_2-epimerase A9X72_02695 AVU64240 512574 513449 + N-acetylmannosamine_kinase A9X72_02700 AVU64241 513446 513910 + YhcH/YjgK/YiaL_family_protein A9X72_02705 AVU64242 513970 515097 - DUF1016_domain-containing_protein A9X72_02710 AVU64243 515281 516699 - glutamate_synthase A9X72_02715 AVU64244 516712 521172 - glutamate_synthase_large_subunit A9X72_02720 A9X72_02725 521095 521321 + hypothetical_protein no_locus_tag AVU64245 521219 521455 + hypothetical_protein A9X72_02730 AVU68315 521847 522776 + TIGR01212_family_radical_SAM_protein A9X72_02735 AVU64246 522872 525208 + hybrid_sensor_histidine_kinase/response regulator A9X72_02740 AVU64247 525438 526091 + glutamine_amidotransferase A9X72_02745 AVU64248 526088 526816 + monofunctional_biosynthetic_peptidoglycan transglycosylase A9X72_02750 AVU64249 526813 527445 - hypothetical_protein A9X72_02755 AVU64250 527659 527931 - phosphocarrier_protein_NPr A9X72_02760 AVU64251 527928 528782 - RNase_adaptor_protein_RapZ A9X72_02765 AVU64252 528828 529319 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN A9X72_02770 AVU64253 529437 529724 - ribosome_hibernation_promoting_factor A9X72_02775 AVU64254 529747 531180 - RNA_polymerase_sigma-54_factor A9X72_02780 AVU64255 531228 531953 - ABC_transporter_ATP-binding_protein lptB AVU64256 531960 532517 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA A9X72_02790 AVU64257 532486 533061 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC AVU64258 533058 533624 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC A9X72_02800 AVU64259 533645 534631 - arabinose_5-phosphate_isomerase_KdsD A9X72_02805 AVU64260 534645 535622 - calcium/sodium_antiporter A9X72_02810 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AVU64242 92 701 107.449856734 0.0 PJR32596.1 AVU64240 97 508 100.0 6e-179 PJR32597.1 AVU64239 99 456 100.0 1e-160 PJR32599.1 AVU64237 100 611 100.0 0.0 PJR32600.1 AVU64236 99 536 100.0 0.0 >> 245. CP010315_0 Source: Escherichia coli strain 789, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2812 Table of genes, locations, strands and annotations of subject cluster: AJE57769 3656608 3657594 + D-arabinose_5-phosphate_isomerase kdsD AJE57770 3657615 3658181 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC AJE57771 3658178 3658753 + protein_YrbK yrbK AJE57772 3658758 3659279 + protein_YhbN yhbN AJE57773 3659286 3660011 + ATP-binding_component_of_a_transport_system yhbG AJE57774 3660059 3661492 + RNA_polymerase_sigma-54_factor rpoN AJE57775 3661515 3661802 + sigma-54_modulation_protein yhbH AJE57776 3661920 3662411 + sugar-specific_enzyme_IIA_component_of_PTS ptsN AJE57777 3662457 3663311 + P-loop-containing_kinase yhbJ AJE57778 3663308 3663580 + phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system ptsO AJE57779 3663794 3664426 + protein_YrbL yrbL AJE57780 3664423 3665151 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AJE57781 3665148 3665801 - enhancing_lycopene_biosynthesis_protein_2 yhbL AJE57782 3666031 3668367 - aerobic_respiration_control_sensor_protein_ArcB arcB AJE57783 3668463 3669392 - FeS_oxidoreductase yhcC AJE57784 3669959 3674527 + glutamate_synthase_[NADPH]_large_chain precursor gltB AJE57785 3674540 3675958 + glutamate_synthase,_small_subunit gltD AJE57786 3676142 3677269 + protein_YhcG yhcG AJE57787 3677329 3677793 - protein_YhcH yhcH AJE57788 3677790 3678665 - N-acetylmannosamine_kinase_1 nanK AJE57789 3678662 3679351 - N-acetylmannosamine-6-P_epimerase nanE AJE57790 3679399 3680889 - sialic_acid_transporter nanT AJE57791 3680998 3681891 - N-acetylneuraminate_lyase_subunit nanA AJE57792 3682013 3682804 - transcriptional_regulator_NanR nanR AJE57793 3683184 3684551 + cryptic_C4-dicarboxylate_carrier dcuD AJE57794 3684594 3685091 - stringent_starvation_protein_B sspB AJE57795 3685097 3685735 - stringent_starvation_protein_A sspA AJE57796 3686130 3686522 - 30S_ribosomal,_subunit_protein_S9 rpsI AJE57797 3686538 3686966 - 50S_ribosomal,_subunit_protein_L13 rplM AJE57798 3687185 3688312 - ATPase yhcM AJE57799 3688506 3688904 + protein_YhcB yhcB AJE57800 3689058 3690425 + serine_endoprotease_DegQ_precursor degQ AJE57801 3690515 3691582 + periplasmic_serine_endoprotease degS AJE57802 3691644 3692582 - malate_dehydrogenase mdh AJE57803 3693017 3693487 + repressor_of_arg_regulon;_cer-mediated_site specific recombination argR AJE57804 3693852 3694115 + protein_YhcN yhcN AJE57805 3694171 3694443 - barnase_inhibitor yhcO AJE57806 3694535 3696502 - p-hydroxybenzoic_acid_efflux_system_component yhcP AJE57807 3696508 3697440 - p-hydroxybenzoic_acid_efflux_system_component aaeA AJE57808 3697448 3697651 - membrane_protein_of_efflux_system aaeX AJE57809 3697834 3698763 + transcriptional_regulator,_LysR_family aaeR AJE57810 3698891 3700336 - suppresses_inhibitory_activity_of_CsrA,_TldD protein tldD AJE57811 3700492 3704292 - membrane_protein,_transporter yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AJE57786 92 701 107.449856734 0.0 PJR32596.1 AJE57788 97 508 100.0 6e-179 PJR32597.1 AJE57789 99 456 100.0 1e-160 PJR32599.1 AJE57791 100 611 100.0 0.0 PJR32600.1 AJE57792 99 536 100.0 0.0 >> 246. CP010140_0 Source: Escherichia coli strain D3, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2812 Table of genes, locations, strands and annotations of subject cluster: APK12500 4100781 4101767 + D-arabinose_5-phosphate_isomerase RG36_20445 APK12501 4101788 4102354 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG36_20450 APK12502 4102351 4102926 + lipopolysaccharide_transporter RG36_20455 APK12503 4102895 4103452 + lipopolysaccharide_transporter RG36_20460 APK12504 4103459 4104184 + sugar_ABC_transporter_ATP-binding_protein RG36_20465 APK12505 4104232 4105665 + RNA_polymerase_factor_sigma-54 RG36_20470 APK12506 4105688 4105975 + ribosome_hibernation_promoting_factor_HPF RG36_20475 APK12507 4106093 4106584 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG36_20480 APK12508 4106630 4107484 + glmZ(sRNA)-inactivating_NTPase RG36_20485 APK12509 4107481 4107753 + phosphohistidinoprotein-hexose phosphotransferase RG36_20490 APK12510 4107967 4108599 + hypothetical_protein RG36_20495 APK12511 4108596 4109324 - peptidoglycan_transglycosylase mtgA APK12512 4109321 4109974 - isoprenoid_biosynthesis_protein RG36_20505 APK12513 4110204 4112540 - aerobic_respiration_control_sensor_protein_ArcB RG36_20510 APK13449 4112636 4113565 - hypothetical_protein RG36_20515 APK13450 4114240 4118700 + glutamate_synthase gltB APK12514 4118713 4120131 + glutamate_synthase RG36_20525 APK12515 4120315 4121442 + hypothetical_protein RG36_20530 APK12516 4121502 4121966 - hypothetical_protein RG36_20535 APK12517 4121963 4122838 - N-acetylmannosamine_kinase RG36_20540 APK12518 4122835 4123524 - N-acetylmannosamine-6-phosphate_2-epimerase RG36_20545 APK12519 4123572 4125062 - sialic_acid_transporter RG36_20550 APK12520 4125171 4126064 - N-acetylneuraminate_lyase RG36_20555 APK12521 4126186 4126977 - transcriptional_regulator_NanR RG36_20560 APK12522 4127357 4128724 + C4-dicarboxylate_transporter RG36_20565 APK12523 4128767 4129264 - Clp_protease_ClpP RG36_20570 APK12524 4129270 4129908 - stringent_starvation_protein_A sspA APK12525 4130303 4130695 - 30S_ribosomal_protein_S9 RG36_20580 APK12526 4130711 4131139 - 50S_ribosomal_protein_L13 RG36_20585 APK12527 4131358 4132485 - hypothetical_protein RG36_20590 APK12528 4132679 4133077 + hypothetical_protein RG36_20595 APK12529 4133231 4134598 + serine_endoprotease_DegQ RG36_20600 APK12530 4134688 4135755 + serine_endoprotease RG36_20605 APK12531 4135817 4136755 - malate_dehydrogenase RG36_20610 APK12532 4137190 4137660 + arginine_repressor RG36_20615 APK12533 4138025 4138288 + membrane_protein RG36_20620 APK12534 4138344 4138616 - hypothetical_protein RG36_20625 APK12535 4138708 4140675 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG36_20630 APK12536 4140681 4141613 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG36_20635 APK13451 4141621 4141824 - transporter RG36_20640 APK12537 4142007 4142936 + transcriptional_regulator RG36_20645 APK12538 4143064 4144509 - protease_TldD tldD APK12539 4144665 4148465 - hypothetical_protein RG36_20655 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APK12515 92 701 107.449856734 0.0 PJR32596.1 APK12517 97 508 100.0 6e-179 PJR32597.1 APK12518 99 456 100.0 1e-160 PJR32599.1 APK12520 100 611 100.0 0.0 PJR32600.1 APK12521 99 536 100.0 0.0 >> 247. CP047576_0 Source: Escherichia coli strain 94EC chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2811 Table of genes, locations, strands and annotations of subject cluster: QHI53938 3313174 3314619 + metalloprotease_TldD tldD QHI53939 3314753 3315682 - HTH-type_transcriptional_activator_AaeR aaeR QHI53940 3315865 3316068 + DUF1656_domain-containing_protein GUJ28_15810 QHI53941 3316076 3317008 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHI53942 3317014 3318981 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHI53943 3319073 3319345 + hypothetical_protein GUJ28_15825 QHI53944 3319401 3319664 - peroxide/acid_stress_response_protein_YhcN yhcN QHI53945 3320029 3320499 - transcriptional_regulator_ArgR argR QHI53946 3320934 3321872 + malate_dehydrogenase mdh QHI53947 3321935 3323002 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QHI53948 3323092 3324459 - serine_endoprotease_DegQ degQ QHI53949 3324613 3325011 - DUF1043_family_protein GUJ28_15855 QHI53950 3325205 3326332 + cell_division_protein_ZapE zapE QHI53951 3326551 3326979 + 50S_ribosomal_protein_L13 rplM QHI53952 3326995 3327387 + 30S_ribosomal_protein_S9 rpsI QHI53953 3327782 3328420 + stringent_starvation_protein_A sspA QHI53954 3328426 3328923 + ClpXP_protease_specificity-enhancing_factor sspB QHI53955 3328966 3330333 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHI53956 3330713 3331504 + transcriptional_regulator_NanR nanR QHI53957 3331626 3332519 + N-acetylneuraminate_lyase nanA QHI53958 3332628 3334118 + sialic_acid_transporter_NanT nanT QHI53959 3334166 3334855 + putative_N-acetylmannosamine-6-phosphate 2-epimerase GUJ28_15905 QHI55389 3334852 3335727 + ROK_family_protein GUJ28_15910 QHI53960 3335724 3336188 + YhcH/YjgK/YiaL_family_protein GUJ28_15915 QHI53961 3336248 3337375 - DUF1016_family_protein GUJ28_15920 QHI53962 3337559 3338977 - glutamate_synthase GUJ28_15925 QHI55390 3338990 3343450 - glutamate_synthase_large_subunit gltB QHI53963 3344125 3345054 + TIGR01212_family_radical_SAM_protein GUJ28_15935 QHI53964 3345150 3347486 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHI53965 3347716 3348369 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHI53966 3348366 3349094 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHI53967 3349091 3349723 - PhoP_regulatory_network_protein_YrbL yrbL QHI53968 3349937 3350209 - PTS_phosphocarrier_protein_NPr npr QHI53969 3350206 3351060 - RNase_adapter_RapZ rapZ QHI53970 3351106 3351597 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHI53971 3351715 3352002 - ribosome_hibernation_promoting_factor GUJ28_15975 QHI53972 3352025 3353458 - RNA_polymerase_factor_sigma-54 rpoN QHI53973 3353506 3354231 - LPS_export_ABC_transporter_ATP-binding_protein lptB QHI53974 3354238 3354795 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHI53975 3354764 3355339 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHI53976 3355336 3355902 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHI53977 3355923 3356909 - arabinose-5-phosphate_isomerase_KdsD kdsD QHI53978 3356923 3357900 - calcium/sodium_antiporter GUJ28_16010 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHI53961 91 699 107.449856734 0.0 PJR32596.1 QHI55389 97 509 100.0 2e-179 PJR32597.1 QHI53959 99 456 100.0 1e-160 PJR32599.1 QHI53957 100 611 100.0 0.0 PJR32600.1 QHI53956 99 536 100.0 0.0 >> 248. CP029242_0 Source: Escherichia coli strain ECCRA-119 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2811 Table of genes, locations, strands and annotations of subject cluster: AWJ97713 546555 548000 + metalloprotease_TldD C7235_02960 AWJ97714 548134 549063 - HTH-type_transcriptional_activator_AaeR C7235_02965 AWJ97715 549246 549449 + protein_AaeX C7235_02970 AWJ97716 549457 550389 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C7235_02975 AWJ97717 550395 552362 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C7235_02980 AWJ97718 552454 552726 + hypothetical_protein C7235_02985 AWJ97719 552782 553045 - DUF1471_domain-containing_protein C7235_02990 AWJ97720 553410 553880 - arginine_repressor C7235_02995 AWJ97721 554315 555253 + malate_dehydrogenase C7235_03000 AWJ97722 555316 556383 - outer_membrane-stress_sensor_serine endopeptidase DegS C7235_03005 AWJ97723 556473 557840 - periplasmic_pH-dependent_serine_endoprotease DegQ C7235_03010 AWJ97724 557994 558392 - DUF1043_domain-containing_protein C7235_03015 AWJ97725 558586 559713 + cell_division_protein_ZapE C7235_03020 AWJ97726 559932 560360 + 50S_ribosomal_protein_L13 C7235_03025 AWJ97727 560376 560768 + 30S_ribosomal_protein_S9 C7235_03030 AWJ97728 560686 560907 - hypothetical_protein C7235_03035 AWK01714 560881 561060 + hypothetical_protein C7235_03040 AWK01713 561012 561221 - hypothetical_protein C7235_03045 AWJ97729 561163 561801 + stringent_starvation_protein_A C7235_03050 AWJ97730 561807 562304 + stringent_starvation_protein_B C7235_03055 AWJ97731 562347 563714 - C4-dicarboxylate_transporter_DcuC C7235_03060 C7235_03065 563714 563824 + transposase no_locus_tag AWJ97732 564094 564885 + transcriptional_regulator_NanR nanR AWJ97733 565007 565900 + N-acetylneuraminate_lyase nanA AWJ97734 566009 567499 + MFS_transporter C7235_03080 AWJ97735 567547 568236 + N-acetylmannosamine-6-phosphate_2-epimerase C7235_03085 AWJ97736 568233 569108 + N-acetylmannosamine_kinase C7235_03090 AWJ97737 569105 569569 + YhcH/YjgK/YiaL_family_protein C7235_03095 AWJ97738 569629 570756 - DUF1016_domain-containing_protein C7235_03100 AWJ97739 570940 572358 - glutamate_synthase C7235_03105 AWJ97740 572371 576831 - glutamate_synthase_large_subunit C7235_03110 C7235_03115 576754 576980 + hypothetical_protein no_locus_tag AWJ97741 576878 577114 + hypothetical_protein C7235_03120 AWK01715 577506 578435 + TIGR01212_family_radical_SAM_protein C7235_03125 AWJ97742 578531 580867 + aerobic_respiration_two-component_sensor histidine kinase ArcB C7235_03130 AWJ97743 581097 581750 + glutamine_amidotransferase C7235_03135 AWJ97744 581747 582475 + monofunctional_biosynthetic_peptidoglycan transglycosylase C7235_03140 AWJ97745 582472 583104 - protein_YrbL yrbL AWJ97746 583318 583590 - phosphocarrier_protein_NPr C7235_03150 AWJ97747 583587 584441 - RNase_adaptor_protein_RapZ C7235_03155 AWJ97748 584487 584978 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C7235_03160 AWJ97749 585096 585383 - ribosome_hibernation_promoting_factor C7235_03165 AWJ97750 585406 586839 - RNA_polymerase_sigma-54_factor C7235_03170 AWJ97751 586887 587612 - ABC_transporter_ATP-binding_protein C7235_03175 AWJ97752 587619 588176 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C7235_03180 AWJ97753 588145 588720 - LPS_export_ABC_transporter_periplasmic_protein LptC C7235_03185 AWJ97754 588717 589283 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC AWJ97755 589304 590290 - arabinose_5-phosphate_isomerase_KdsD C7235_03195 AWJ97756 590304 591281 - calcium/sodium_antiporter C7235_03200 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AWJ97738 91 699 107.449856734 0.0 PJR32596.1 AWJ97736 97 509 100.0 2e-179 PJR32597.1 AWJ97735 99 456 100.0 1e-160 PJR32599.1 AWJ97733 100 611 100.0 0.0 PJR32600.1 AWJ97732 99 536 100.0 0.0 >> 249. CP028122_0 Source: Escherichia coli O43 str. RM10042 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2811 Table of genes, locations, strands and annotations of subject cluster: AWJ50680 3683375 3684361 + arabinose_5-phosphate_isomerase_KdsD I3W_20390 AWJ50681 3684382 3684948 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC AWJ50682 3684945 3685520 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AWJ50683 3685489 3686046 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA I3W_20405 AWJ50684 3686053 3686778 + ABC_transporter_ATP-binding_protein I3W_20410 AWJ50685 3686826 3688259 + RNA_polymerase_sigma-54_factor I3W_20415 AWJ50686 3688282 3688569 + ribosome_hibernation_promoting_factor I3W_20420 AWJ50687 3688687 3689178 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN I3W_20425 AWJ50688 3689224 3690078 + RNase_adaptor_protein_RapZ I3W_20430 AWJ50689 3690075 3690347 + phosphocarrier_protein_NPr I3W_20435 AWJ50690 3690561 3691193 + protein_YrbL yrbL AWJ50691 3691190 3691918 - monofunctional_biosynthetic_peptidoglycan transglycosylase I3W_20445 AWJ50692 3691915 3692568 - glutamine_amidotransferase I3W_20450 AWJ50693 3692798 3695134 - hybrid_sensor_histidine_kinase/response regulator I3W_20455 AWJ52083 3695230 3696159 - TIGR01212_family_radical_SAM_protein I3W_20460 AWJ50694 3696551 3696787 - hypothetical_protein I3W_20465 I3W_20470 3696685 3696911 - hypothetical_protein no_locus_tag AWJ50695 3696834 3701294 + glutamate_synthase_large_subunit I3W_20475 AWJ50696 3701307 3702725 + glutamate_synthase I3W_20480 AWJ50697 3702909 3704036 + DUF1016_domain-containing_protein I3W_20485 AWJ50698 3704096 3704560 - YhcH/YjgK/YiaL_family_protein I3W_20490 AWJ50699 3704557 3705432 - N-acetylmannosamine_kinase I3W_20495 AWJ50700 3705429 3706118 - N-acetylmannosamine-6-phosphate_2-epimerase I3W_20500 AWJ50701 3706166 3707656 - MFS_transporter I3W_20505 AWJ50702 3707765 3708658 - N-acetylneuraminate_lyase nanA AWJ50703 3708780 3709571 - transcriptional_regulator_NanR nanR I3W_20520 3709841 3709951 - transposase no_locus_tag AWJ50704 3709951 3711318 + C4-dicarboxylate_transporter I3W_20525 AWJ50705 3711361 3711858 - stringent_starvation_protein_B I3W_20530 AWJ50706 3711864 3712502 - stringent_starvation_protein_A I3W_20535 AWJ50707 3712444 3712653 + hypothetical_protein I3W_20540 AWJ52084 3712605 3712784 - hypothetical_protein I3W_20545 AWJ50708 3712758 3712979 + hypothetical_protein I3W_20550 AWJ50709 3712897 3713289 - 30S_ribosomal_protein_S9 I3W_20555 AWJ50710 3713305 3713733 - 50S_ribosomal_protein_L13 I3W_20560 AWJ50711 3713952 3715079 - cell_division_protein_ZapE I3W_20565 AWJ50712 3715273 3715671 + hypothetical_protein I3W_20570 AWJ50713 3715825 3717192 + periplasmic_pH-dependent_serine_endoprotease DegQ I3W_20575 AWJ50714 3717282 3718349 + outer_membrane-stress_sensor_serine endopeptidase DegS I3W_20580 AWJ50715 3718411 3719349 - malate_dehydrogenase I3W_20585 AWJ50716 3719784 3720254 + arginine_repressor I3W_20590 AWJ50717 3720619 3720882 + DUF1471_domain-containing_protein I3W_20595 AWJ50718 3720938 3721210 - hypothetical_protein I3W_20600 AWJ50719 3721302 3723269 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB I3W_20605 AWJ50720 3723275 3724207 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA I3W_20610 AWJ50721 3724215 3724418 - protein_AaeX I3W_20615 AWJ50722 3724601 3725530 + HTH-type_transcriptional_activator_AaeR I3W_20620 AWJ50723 3725658 3727103 - metalloprotease_TldD I3W_20625 AWJ50724 3727259 3731059 - AsmA2_domain-containing_protein I3W_20630 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AWJ50697 91 699 107.449856734 0.0 PJR32596.1 AWJ50699 97 509 100.0 2e-179 PJR32597.1 AWJ50700 99 456 100.0 1e-160 PJR32599.1 AWJ50702 100 611 100.0 0.0 PJR32600.1 AWJ50703 99 536 100.0 0.0 >> 250. CP018840_0 Source: Escherichia coli strain KSC64 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2811 Table of genes, locations, strands and annotations of subject cluster: ARV34107 1067278 1068264 + D-arabinose_5-phosphate_isomerase BUQ71_05585 ARV34108 1068285 1068851 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BUQ71_05590 ARV34109 1068848 1069423 + LPS_export_ABC_transporter_periplasmic_protein LptC BUQ71_05595 ARV34110 1069392 1069949 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA BUQ71_05600 ARV34111 1069956 1070681 + LPS_export_ABC_transporter_ATP-binding_protein BUQ71_05605 ARV34112 1070729 1072162 + RNA_polymerase_factor_sigma-54 BUQ71_05610 ARV34113 1072185 1072472 + ribosomal_subunit_interface_protein BUQ71_05615 ARV34114 1072590 1073081 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN BUQ71_05620 ARV34115 1073127 1073981 + RNase_adaptor_protein_RapZ BUQ71_05625 ARV34116 1073978 1074250 + phosphohistidinoprotein-hexose phosphotransferase BUQ71_05630 ARV34117 1074464 1075096 + hypothetical_protein BUQ71_05635 ARV34118 1075093 1075821 - monofunctional_biosynthetic_peptidoglycan transglycosylase BUQ71_05640 ARV34119 1075818 1076471 - isoprenoid_biosynthesis_protein_ElbB BUQ71_05645 ARV34120 1076701 1079037 - aerobic_respiration_two-component_sensor histidine kinase ArcB BUQ71_05650 ARV37525 1079133 1080062 - TIGR01212_family_radical_SAM_protein BUQ71_05655 ARV34121 1080081 1080263 + hypothetical_protein BUQ71_05660 ARV34122 1080445 1080681 - hypothetical_protein BUQ71_05665 BUQ71_05670 1080579 1080805 - hypothetical_protein no_locus_tag ARV34123 1080728 1085188 + glutamate_synthase_large_subunit BUQ71_05675 ARV34124 1085201 1086619 + glutamate_synthase BUQ71_05680 ARV34125 1086803 1087930 + hypothetical_protein BUQ71_05685 ARV34126 1087990 1088454 - hypothetical_protein BUQ71_05690 ARV34127 1088451 1089326 - N-acetylmannosamine_kinase BUQ71_05695 ARV34128 1089323 1090012 - N-acetylmannosamine-6-phosphate_2-epimerase BUQ71_05700 ARV34129 1090060 1091550 - MFS_transporter BUQ71_05705 ARV34130 1091659 1092552 - N-acetylneuraminate_lyase BUQ71_05710 ARV34131 1092674 1093465 - transcriptional_regulator_NanR BUQ71_05715 BUQ71_05720 1093735 1093845 - transposase no_locus_tag ARV34132 1093845 1095212 + C4-dicarboxylate_transporter BUQ71_05725 ARV34133 1095255 1095752 - ClpXP_protease_specificity-enhancing_factor BUQ71_05730 ARV34134 1095758 1096396 - stringent_starvation_protein_A sspA ARV34135 1096791 1097183 - 30S_ribosomal_protein_S9 BUQ71_05740 ARV34136 1097199 1097627 - 50S_ribosomal_protein_L13 BUQ71_05745 ARV34137 1097846 1098973 - cell_division_protein_ZapE BUQ71_05750 ARV34138 1099167 1099565 + hypothetical_protein BUQ71_05755 ARV34139 1099719 1101086 + serine_endoprotease_DegQ BUQ71_05760 ARV34140 1101176 1102243 + outer_membrane-stress_sensor_serine endopeptidase DegS BUQ71_05765 ARV34141 1102306 1103244 - malate_dehydrogenase BUQ71_05770 ARV34142 1103679 1104149 + arginine_repressor BUQ71_05775 ARV34143 1104514 1104777 + hypothetical_protein BUQ71_05780 ARV34144 1104833 1105105 - hypothetical_protein BUQ71_05785 ARV34145 1105197 1107164 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BUQ71_05790 ARV34146 1107170 1108102 - efflux_transporter_periplasmic_adaptor_subunit BUQ71_05795 ARV34147 1108110 1108313 - transporter BUQ71_05800 ARV34148 1108496 1109425 + transcriptional_regulator BUQ71_05805 ARV34149 1109553 1110998 - metalloprotease_TldD BUQ71_05810 ARV34150 1111154 1114954 - TIGR02099_family_protein BUQ71_05815 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ARV34125 91 699 107.449856734 0.0 PJR32596.1 ARV34127 97 509 100.0 2e-179 PJR32597.1 ARV34128 99 456 100.0 1e-160 PJR32599.1 ARV34130 100 611 100.0 0.0 PJR32600.1 ARV34131 99 536 100.0 0.0 >> 251. CP048376_0 Source: Escherichia coli strain 38 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2807 Table of genes, locations, strands and annotations of subject cluster: QHW91030 521963 523408 + metalloprotease_TldD tldD QHW91031 523536 524465 - HTH-type_transcriptional_activator_AaeR aaeR QHW91032 524648 524851 + AaeX_family_protein GZS06_02500 QHW91033 524859 525791 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHW91034 525797 527764 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHW91035 527856 528128 + hypothetical_protein GZS06_02515 QHW91036 528184 528447 - peroxide/acid_stress_response_protein_YhcN yhcN QHW91037 528812 529282 - transcriptional_regulator_ArgR argR QHW91038 529717 530655 + malate_dehydrogenase mdh QHW91039 530717 531784 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QHW91040 531874 533241 - serine_endoprotease_DegQ degQ QHW91041 533395 533793 - DUF1043_family_protein GZS06_02545 QHW91042 533987 535114 + cell_division_protein_ZapE GZS06_02550 QHW91043 535333 535761 + 50S_ribosomal_protein_L13 rplM QHW91044 535777 536169 + 30S_ribosomal_protein_S9 rpsI QHW91045 536564 537202 + stringent_starvation_protein_A sspA QHW91046 537208 537705 + ClpXP_protease_specificity-enhancing_factor sspB QHW91047 537748 539115 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHW91048 539495 540286 + transcriptional_regulator_NanR nanR QHW91049 540408 541301 + N-acetylneuraminate_lyase nanA QHW91050 541410 542900 + sialic_acid_transporter_NanT nanT QHW91051 542948 543637 + N-acetylmannosamine-6-phosphate_2-epimerase GZS06_02595 QHW94646 543634 544509 + N-acetylmannosamine_kinase GZS06_02600 QHW91052 544506 544970 + DUF386_domain-containing_protein GZS06_02605 QHW91053 545030 546157 - DUF1016_domain-containing_protein GZS06_02610 QHW91054 546341 547759 - glutamate_synthase GZS06_02615 QHW94647 547772 552232 - glutamate_synthase_large_subunit gltB QHW91055 552907 553836 + TIGR01212_family_radical_SAM_protein GZS06_02625 QHW91056 553932 556268 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHW91057 556498 557151 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHW91058 557148 557876 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHW91059 557873 558505 - PhoP_regulatory_network_protein_YrbL yrbL QHW91060 558719 558991 - PTS_phosphocarrier_protein_NPr npr QHW91061 558988 559842 - RNase_adapter_RapZ rapZ QHW91062 559888 560379 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHW91063 560497 560784 - ribosome_hibernation_promoting_factor hpf QHW91064 560807 562240 - RNA_polymerase_factor_sigma-54 rpoN QHW91065 562288 563013 - LPS_export_ABC_transporter_ATP-binding_protein lptB QHW91066 563020 563577 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHW91067 563546 564121 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHW91068 564118 564684 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHW91069 564705 565691 - arabinose-5-phosphate_isomerase_KdsD kdsD QHW91070 565705 566682 - calcium/sodium_antiporter GZS06_02700 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHW91053 91 696 107.449856734 0.0 PJR32596.1 QHW94646 97 508 100.0 6e-179 PJR32597.1 QHW91051 99 456 100.0 1e-160 PJR32599.1 QHW91049 100 611 100.0 0.0 PJR32600.1 QHW91048 99 536 100.0 0.0 >> 252. CP048344_0 Source: Escherichia coli strain 124 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2807 Table of genes, locations, strands and annotations of subject cluster: QHW72724 523157 524602 + metalloprotease_TldD tldD QHW72725 524730 525659 - HTH-type_transcriptional_activator_AaeR aaeR QHW72726 525842 526045 + AaeX_family_protein GZS11_02505 QHW72727 526053 526985 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHW72728 526991 528958 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHW72729 529050 529322 + hypothetical_protein GZS11_02520 QHW72730 529378 529641 - peroxide/acid_stress_response_protein_YhcN yhcN QHW72731 530006 530476 - transcriptional_regulator_ArgR argR QHW72732 530911 531849 + malate_dehydrogenase mdh QHW72733 531911 532978 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QHW72734 533068 534435 - serine_endoprotease_DegQ degQ QHW72735 534589 534987 - DUF1043_family_protein GZS11_02550 QHW72736 535181 536308 + cell_division_protein_ZapE GZS11_02555 QHW72737 536527 536955 + 50S_ribosomal_protein_L13 rplM QHW72738 536971 537363 + 30S_ribosomal_protein_S9 rpsI QHW72739 537758 538396 + stringent_starvation_protein_A sspA QHW72740 538402 538899 + ClpXP_protease_specificity-enhancing_factor sspB QHW72741 538942 540309 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHW72742 540689 541480 + transcriptional_regulator_NanR nanR QHW72743 541602 542495 + N-acetylneuraminate_lyase nanA QHW72744 542604 544094 + sialic_acid_transporter_NanT nanT QHW72745 544142 544831 + N-acetylmannosamine-6-phosphate_2-epimerase GZS11_02600 QHW76339 544828 545703 + N-acetylmannosamine_kinase GZS11_02605 QHW72746 545700 546164 + DUF386_domain-containing_protein GZS11_02610 QHW72747 546224 547351 - DUF1016_domain-containing_protein GZS11_02615 QHW72748 547535 548953 - glutamate_synthase GZS11_02620 QHW76340 548966 553426 - glutamate_synthase_large_subunit gltB QHW72749 554101 555030 + TIGR01212_family_radical_SAM_protein GZS11_02630 QHW72750 555126 557462 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHW72751 557692 558345 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHW72752 558342 559070 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHW72753 559067 559699 - PhoP_regulatory_network_protein_YrbL yrbL QHW72754 559913 560185 - PTS_phosphocarrier_protein_NPr npr QHW72755 560182 561036 - RNase_adapter_RapZ rapZ QHW72756 561082 561573 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHW72757 561691 561978 - ribosome_hibernation_promoting_factor hpf QHW72758 562001 563434 - RNA_polymerase_factor_sigma-54 rpoN QHW72759 563482 564207 - LPS_export_ABC_transporter_ATP-binding_protein lptB QHW72760 564214 564771 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHW72761 564740 565315 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHW72762 565312 565878 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHW72763 565899 566885 - arabinose-5-phosphate_isomerase_KdsD kdsD QHW72764 566899 567876 - calcium/sodium_antiporter GZS11_02705 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHW72747 91 696 107.449856734 0.0 PJR32596.1 QHW76339 97 508 100.0 6e-179 PJR32597.1 QHW72745 99 456 100.0 1e-160 PJR32599.1 QHW72743 100 611 100.0 0.0 PJR32600.1 QHW72742 99 536 100.0 0.0 >> 253. CP040397_0 Source: Escherichia coli strain BA22372 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2807 Table of genes, locations, strands and annotations of subject cluster: QCT09884 45674 46660 + arabinose-5-phosphate_isomerase_KdsD kdsD QCT09885 46681 47247 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QCT09886 47244 47819 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCT09887 47788 48345 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QCT09888 48352 49077 + LPS_export_ABC_transporter_ATP-binding_protein lptB QCT09889 49125 50558 + RNA_polymerase_factor_sigma-54 rpoN QCT09890 50581 50868 + ribosome_hibernation_promoting_factor FEV15_00280 QCT09891 50986 51477 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QCT09892 51523 52377 + RNase_adapter_RapZ rapZ QCT09893 52374 52646 + PTS_phosphocarrier_protein_NPr npr QCT09894 52860 53492 + PhoP_regulatory_network_protein_YrbL yrbL QCT09895 53489 54217 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QCT09896 54214 54867 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QCT09897 55097 57433 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QCT09898 57529 58458 - TIGR01212_family_radical_SAM_protein FEV15_00320 QCT13937 59133 63593 + glutamate_synthase_large_subunit gltB QCT09899 63606 65024 + glutamate_synthase FEV15_00330 QCT09900 65208 66335 + DUF1016_domain-containing_protein FEV15_00335 QCT09901 66395 66859 - DUF386_domain-containing_protein FEV15_00340 QCT09902 66856 67731 - ROK_family_protein FEV15_00345 QCT09903 67728 68417 - N-acetylmannosamine-6-phosphate_2-epimerase FEV15_00350 QCT09904 68465 69955 - sialic_acid_transporter_NanT nanT QCT09905 70064 70957 - N-acetylneuraminate_lyase nanA QCT09906 71079 71870 - transcriptional_regulator_NanR nanR QCT09907 72250 73617 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QCT09908 73660 74157 - ClpXP_protease_specificity-enhancing_factor sspB QCT09909 74163 74801 - stringent_starvation_protein_A sspA QCT09910 75057 75278 + hypothetical_protein FEV15_00385 QCT09911 75196 75588 - 30S_ribosomal_protein_S9 rpsI QCT09912 75604 76032 - 50S_ribosomal_protein_L13 rplM QCT09913 76251 77378 - cell_division_protein_ZapE FEV15_00400 QCT09914 77572 77970 + DUF1043_family_protein FEV15_00405 QCT09915 78124 79491 + serine_endoprotease_DegQ degQ QCT09916 79581 80648 + serine_endoprotease_DegS FEV15_00415 QCT09917 80710 81648 - malate_dehydrogenase mdh QCT09918 82083 82553 + transcriptional_regulator_ArgR argR QCT09919 82918 83181 + peroxide/acid_stress_response_protein_YhcN yhcN QCT09920 83237 83509 - hypothetical_protein FEV15_00435 QCT09921 83601 85568 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCT09922 85574 86506 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCT09923 86514 86717 - DUF1656_domain-containing_protein FEV15_00450 QCT09924 86900 87829 + HTH-type_transcriptional_activator_AaeR aaeR QCT09925 87957 89402 - metalloprotease_TldD tldD QCT09926 89558 93358 - AsmA2_domain-containing_protein FEV15_00465 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCT09900 91 696 107.449856734 0.0 PJR32596.1 QCT09902 97 508 100.0 6e-179 PJR32597.1 QCT09903 99 456 100.0 1e-160 PJR32599.1 QCT09905 100 611 100.0 0.0 PJR32600.1 QCT09906 99 536 100.0 0.0 >> 254. CP040381_0 Source: Escherichia coli strain A1_180 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2807 Table of genes, locations, strands and annotations of subject cluster: QCV32731 548819 550264 + metalloprotease_TldD tldD QCV32732 550392 551321 - HTH-type_transcriptional_activator_AaeR aaeR QCV32733 551504 551707 + DUF1656_domain-containing_protein FE172_02730 QCV32734 551715 552647 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCV32735 552653 554620 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCV32736 554712 554984 + hypothetical_protein FE172_02745 QCV32737 555040 555303 - peroxide/acid_stress_response_protein_YhcN yhcN QCV32738 555668 556138 - transcriptional_regulator_ArgR argR QCV32739 556573 557511 + malate_dehydrogenase mdh QCV32740 557573 558640 - serine_endoprotease_DegS FE172_02765 QCV32741 558730 560097 - serine_endoprotease_DegQ degQ QCV32742 560251 560649 - DUF1043_family_protein FE172_02775 QCV32743 560843 561970 + cell_division_protein_ZapE FE172_02780 QCV32744 562189 562617 + 50S_ribosomal_protein_L13 rplM QCV32745 562633 563025 + 30S_ribosomal_protein_S9 rpsI QCV32746 562943 563164 - hypothetical_protein FE172_02795 QCV32747 563420 564058 + stringent_starvation_protein_A sspA QCV32748 564064 564561 + ClpXP_protease_specificity-enhancing_factor sspB QCV32749 564604 565971 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QCV32750 566351 567142 + transcriptional_regulator_NanR nanR QCV32751 567264 568157 + N-acetylneuraminate_lyase nanA QCV32752 568266 569756 + sialic_acid_transporter_NanT nanT QCV32753 569804 570493 + N-acetylmannosamine-6-phosphate_2-epimerase FE172_02830 QCV32754 570490 571365 + ROK_family_protein FE172_02835 QCV32755 571362 571826 + DUF386_domain-containing_protein FE172_02840 QCV32756 571886 573013 - DUF1016_domain-containing_protein FE172_02845 QCV32757 573197 574615 - glutamate_synthase FE172_02850 QCV36400 574628 579088 - glutamate_synthase_large_subunit gltB QCV32758 579763 580692 + TIGR01212_family_radical_SAM_protein FE172_02860 QCV32759 580788 583124 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QCV32760 583354 584007 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QCV32761 584004 584732 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QCV32762 584729 585361 - PhoP_regulatory_network_protein_YrbL yrbL QCV32763 585575 585847 - PTS_phosphocarrier_protein_NPr npr QCV32764 585844 586698 - RNase_adapter_RapZ rapZ QCV32765 586744 587235 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QCV32766 587353 587640 - ribosome_hibernation_promoting_factor FE172_02900 QCV32767 587663 589096 - RNA_polymerase_factor_sigma-54 rpoN QCV32768 589144 589869 - LPS_export_ABC_transporter_ATP-binding_protein lptB QCV32769 589876 590433 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QCV32770 590402 590977 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCV32771 590974 591540 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QCV32772 591561 592547 - arabinose-5-phosphate_isomerase_KdsD kdsD QCV32773 592561 593538 - calcium/sodium_antiporter FE172_02935 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCV32756 91 696 107.449856734 0.0 PJR32596.1 QCV32754 97 508 100.0 6e-179 PJR32597.1 QCV32753 99 456 100.0 1e-160 PJR32599.1 QCV32751 100 611 100.0 0.0 PJR32600.1 QCV32750 99 536 100.0 0.0 >> 255. CP035944_0 Source: Escherichia coli strain AR24.2b chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2807 Table of genes, locations, strands and annotations of subject cluster: QCR10913 544518 545963 + metalloprotease_TldD tldD QCR10914 546091 547020 - HTH-type_transcriptional_activator_AaeR aaeR QCR10915 547203 547406 + DUF1656_domain-containing_protein EXT04_02680 QCR10916 547414 548346 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCR10917 548352 550319 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCR10918 550411 550683 + hypothetical_protein EXT04_02695 QCR10919 550739 551002 - peroxide/acid_stress_response_protein_YhcN yhcN QCR10920 551367 551837 - transcriptional_regulator_ArgR argR QCR10921 552272 553210 + malate_dehydrogenase EXT04_02710 QCR10922 553272 554339 - serine_endoprotease_DegS degS QCR10923 554429 555796 - serine_endoprotease_DegQ degQ QCR10924 555950 556348 - DUF1043_family_protein EXT04_02725 QCR10925 556542 557669 + cell_division_protein_ZapE EXT04_02730 QCR10926 557888 558316 + 50S_ribosomal_protein_L13 EXT04_02735 QCR10927 558332 558724 + 30S_ribosomal_protein_S9 EXT04_02740 QCR10928 558642 558863 - hypothetical_protein EXT04_02745 QCR10929 559119 559757 + stringent_starvation_protein_A EXT04_02750 QCR10930 559763 560260 + ClpXP_protease_specificity-enhancing_factor sspB QCR10931 560303 561670 - C4-dicarboxylate_transporter_DcuC dcuC EXT04_02765 561994 562691 - IS1_family_transposase no_locus_tag QCR10932 562826 563617 + transcriptional_regulator_NanR nanR QCR10933 563739 564632 + N-acetylneuraminate_lyase nanA QCR10934 564741 566231 + sialic_acid_transporter_NanT nanT QCR10935 566279 566968 + N-acetylmannosamine-6-phosphate_2-epimerase EXT04_02785 QCR10936 566965 567840 + ROK_family_protein EXT04_02790 QCR10937 567837 568301 + YhcH/YjgK/YiaL_family_protein EXT04_02795 QCR10938 568361 569488 - DUF1016_domain-containing_protein EXT04_02800 QCR10939 569672 571090 - glutamate_synthase EXT04_02805 QCR10940 571103 575563 - glutamate_synthase_large_subunit gltB QCR14514 576238 577167 + TIGR01212_family_radical_SAM_protein EXT04_02815 QCR10941 577263 579599 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QCR10942 579829 580482 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QCR10943 580479 581207 + monofunctional_biosynthetic_peptidoglycan transglycosylase EXT04_02830 QCR10944 581204 581836 - PhoP_regulatory_network_protein_YrbL yrbL QCR10945 582050 582322 - PTS_phosphocarrier_protein_NPr EXT04_02840 QCR10946 582319 583173 - RNase_adapter_RapZ rapZ QCR10947 583219 583710 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QCR10948 583828 584115 - ribosome_hibernation_promoting_factor EXT04_02855 QCR10949 584138 585571 - RNA_polymerase_factor_sigma-54 EXT04_02860 QCR10950 585619 586344 - lipopolysaccharide_ABC_transporter_ATP-binding protein EXT04_02865 QCR10951 586351 586908 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QCR10952 586877 587452 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCR10953 587449 588015 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QCR10954 588036 589022 - arabinose-5-phosphate_isomerase_KdsD kdsD QCR10955 589036 590013 - calcium/sodium_antiporter EXT04_02890 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCR10938 91 696 107.449856734 0.0 PJR32596.1 QCR10936 97 508 100.0 6e-179 PJR32597.1 QCR10935 99 456 100.0 1e-160 PJR32599.1 QCR10933 100 611 100.0 0.0 PJR32600.1 QCR10932 99 536 100.0 0.0 >> 256. CP035325_0 Source: Escherichia coli strain BR12-DEC chromosome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2807 Table of genes, locations, strands and annotations of subject cluster: QAU74091 3489336 3490322 + arabinose-5-phosphate_isomerase_KdsD kdsD QAU74092 3490343 3490909 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QAU74093 3490906 3491481 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QAU74094 3491450 3492007 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QAU74095 3492014 3492739 + lipopolysaccharide_ABC_transporter_ATP-binding protein ETE51_17190 QAU74096 3492787 3494220 + RNA_polymerase_factor_sigma-54 ETE51_17195 QAU74097 3494243 3494530 + ribosome_hibernation_promoting_factor ETE51_17200 QAU74098 3494648 3495139 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QAU74099 3495185 3496039 + RNase_adapter_RapZ rapZ QAU74100 3496036 3496308 + PTS_phosphocarrier_protein_NPr ETE51_17215 QAU74101 3496522 3497154 + PhoP_regulatory_network_protein_YrbL yrbL QAU74102 3497151 3497879 - monofunctional_biosynthetic_peptidoglycan transglycosylase ETE51_17225 QAU74103 3497876 3498529 - isoprenoid_biosynthesis_protein_ElbB elbB QAU74104 3498759 3501095 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QAU74105 3501191 3502120 - TIGR01212_family_radical_SAM_protein ETE51_17240 QAU74106 3502795 3507255 + glutamate_synthase_large_subunit gltB QAU74107 3507268 3508686 + glutamate_synthase ETE51_17250 QAU74108 3508870 3509997 + DUF1016_domain-containing_protein ETE51_17255 QAU74109 3510057 3510521 - YhcH/YjgK/YiaL_family_protein ETE51_17260 QAU74110 3510518 3511393 - ROK_family_protein ETE51_17265 QAU74111 3511390 3512079 - N-acetylmannosamine-6-phosphate_2-epimerase ETE51_17270 QAU74112 3512127 3513617 - MFS_transporter ETE51_17275 QAU74113 3513726 3514619 - N-acetylneuraminate_lyase nanA QAU74114 3514741 3515532 - transcriptional_regulator_NanR ETE51_17285 QAU74115 3515912 3517279 + C4-dicarboxylate_transporter_DcuC dcuC QAU74116 3517322 3517819 - ClpXP_protease_specificity-enhancing_factor sspB QAU74117 3517825 3518463 - stringent_starvation_protein_A ETE51_17300 QAU74118 3518719 3518940 + hypothetical_protein ETE51_17305 QAU74119 3518858 3519250 - 30S_ribosomal_protein_S9 ETE51_17310 QAU74120 3519266 3519694 - 50S_ribosomal_protein_L13 ETE51_17315 QAU74121 3519913 3521040 - cell_division_protein_ZapE zapE QAU74122 3521234 3521632 + DUF1043_family_protein ETE51_17325 QAU74123 3521786 3523153 + serine_endoprotease_DegQ degQ QAU74124 3523243 3524310 + serine_endoprotease_DegS degS QAU74125 3524372 3525310 - malate_dehydrogenase ETE51_17340 QAU74126 3525745 3526215 + transcriptional_regulator_ArgR argR QAU74127 3526580 3526843 + peroxide/acid_stress_response_protein_YhcN yhcN QAU74128 3526899 3527171 - hypothetical_protein ETE51_17355 QAU74129 3527263 3529230 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QAU74130 3529236 3530168 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QAU74131 3530176 3530379 - DUF1656_domain-containing_protein ETE51_17370 QAU74132 3530562 3531491 + HTH-type_transcriptional_activator_AaeR aaeR QAU74133 3531619 3533064 - metalloprotease_TldD tldD QAU74134 3533220 3537020 - AsmA2_domain-containing_protein ETE51_17385 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QAU74108 91 696 107.449856734 0.0 PJR32596.1 QAU74110 97 508 100.0 6e-179 PJR32597.1 QAU74111 99 456 100.0 1e-160 PJR32599.1 QAU74113 100 611 100.0 0.0 PJR32600.1 QAU74114 99 536 100.0 0.0 >> 257. CP034966_0 Source: Escherichia coli strain WCHEC020032 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2807 Table of genes, locations, strands and annotations of subject cluster: QAS88586 531441 532886 + metalloprotease_TldD tldD QAS88587 533014 533943 - HTH-type_transcriptional_activator_AaeR aaeR QAS88588 534126 534329 + DUF1656_domain-containing_protein C7V17_04430 QAS88589 534337 535269 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QAS88590 535275 537242 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QAS88591 537334 537606 + hypothetical_protein C7V17_04445 QAS88592 537662 537925 - peroxide/acid_stress_response_protein_YhcN C7V17_04450 QAS88593 538290 538760 - transcriptional_regulator_ArgR argR QAS88594 539195 540133 + malate_dehydrogenase C7V17_04460 QAS88595 540195 541262 - serine_endoprotease_DegS degS QAS88596 541352 542719 - serine_endoprotease_DegQ degQ QAS88597 542873 543271 - DUF1043_family_protein C7V17_04475 QAS88598 543465 544592 + cell_division_protein_ZapE zapE QAS88599 544811 545239 + 50S_ribosomal_protein_L13 C7V17_04485 QAS88600 545255 545647 + 30S_ribosomal_protein_S9 C7V17_04490 QAS88601 545565 545786 - hypothetical_protein C7V17_04495 QAS88602 546042 546680 + stringent_starvation_protein_A C7V17_04500 QAS88603 546686 547183 + ClpXP_protease_specificity-enhancing_factor C7V17_04505 QAS88604 547226 548593 - C4-dicarboxylate_transporter_DcuC dcuC QAS88605 548973 549764 + transcriptional_regulator_NanR C7V17_04515 QAS88606 549886 550779 + N-acetylneuraminate_lyase nanA QAS88607 550888 552378 + MFS_transporter C7V17_04525 QAS88608 552426 553115 + N-acetylmannosamine-6-phosphate_2-epimerase C7V17_04530 QAS92230 553112 553987 + ROK_family_protein C7V17_04535 QAS88609 553984 554448 + YhcH/YjgK/YiaL_family_protein C7V17_04540 QAS88610 554508 555635 - DUF1016_domain-containing_protein C7V17_04545 QAS88611 555819 557237 - glutamate_synthase C7V17_04550 QAS88612 557250 561710 - glutamate_synthase_large_subunit C7V17_04555 QAS88613 562385 563314 + TIGR01212_family_radical_SAM_protein C7V17_04560 QAS88614 563410 565746 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QAS88615 565976 566629 + isoprenoid_biosynthesis_protein_ElbB elbB QAS88616 566626 567354 + monofunctional_biosynthetic_peptidoglycan transglycosylase C7V17_04575 QAS88617 567351 567983 - PhoP_regulatory_network_protein_YrbL yrbL QAS88618 568197 568469 - PTS_phosphocarrier_protein_NPr C7V17_04585 QAS88619 568466 569320 - RNase_adapter_RapZ rapZ QAS88620 569366 569857 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QAS88621 569975 570262 - ribosome_hibernation_promoting_factor C7V17_04600 QAS88622 570285 571718 - RNA_polymerase_factor_sigma-54 C7V17_04605 QAS88623 571766 572491 - lipopolysaccharide_ABC_transporter_ATP-binding protein C7V17_04610 QAS88624 572498 573055 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QAS88625 573024 573599 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QAS88626 573596 574162 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QAS88627 574183 575169 - arabinose-5-phosphate_isomerase_KdsD kdsD QAS88628 575183 576160 - calcium/sodium_antiporter C7V17_04635 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QAS88610 91 696 107.449856734 0.0 PJR32596.1 QAS92230 97 508 100.0 6e-179 PJR32597.1 QAS88608 99 456 100.0 1e-160 PJR32599.1 QAS88606 100 611 100.0 0.0 PJR32600.1 QAS88605 99 536 100.0 0.0 >> 258. CP034958_0 Source: Escherichia coli strain SCEC020026 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2807 Table of genes, locations, strands and annotations of subject cluster: QAS83943 547239 548684 + metalloprotease_TldD tldD QAS83944 548812 549741 - HTH-type_transcriptional_activator_AaeR aaeR QAS83945 549924 550127 + DUF1656_domain-containing_protein C7V14_03710 QAS83946 550135 551067 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QAS83947 551073 553040 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QAS83948 553132 553404 + hypothetical_protein C7V14_03725 QAS83949 553460 553723 - peroxide/acid_stress_response_protein_YhcN C7V14_03730 QAS83950 554088 554558 - transcriptional_regulator_ArgR argR QAS83951 554993 555931 + malate_dehydrogenase C7V14_03740 QAS83952 555993 557060 - serine_endoprotease_DegS degS QAS83953 557150 558517 - serine_endoprotease_DegQ degQ QAS83954 558671 559069 - DUF1043_family_protein C7V14_03755 QAS83955 559263 560390 + cell_division_protein_ZapE zapE QAS83956 560609 561037 + 50S_ribosomal_protein_L13 C7V14_03765 QAS83957 561053 561445 + 30S_ribosomal_protein_S9 C7V14_03770 QAS83958 561363 561584 - hypothetical_protein C7V14_03775 QAS83959 561840 562478 + stringent_starvation_protein_A C7V14_03780 QAS83960 562484 562981 + ClpXP_protease_specificity-enhancing_factor C7V14_03785 QAS83961 563024 564391 - C4-dicarboxylate_transporter_DcuC dcuC QAS83962 564771 565562 + transcriptional_regulator_NanR C7V14_03795 QAS83963 565684 566577 + N-acetylneuraminate_lyase nanA QAS83964 566686 568176 + MFS_transporter C7V14_03805 QAS83965 568224 568913 + N-acetylmannosamine-6-phosphate_2-epimerase C7V14_03810 QAS87614 568910 569785 + ROK_family_protein C7V14_03815 QAS83966 569782 570246 + YhcH/YjgK/YiaL_family_protein C7V14_03820 QAS83967 570306 571433 - DUF1016_domain-containing_protein C7V14_03825 QAS83968 571617 573035 - glutamate_synthase C7V14_03830 QAS83969 573048 577508 - glutamate_synthase_large_subunit C7V14_03835 QAS83970 578183 579112 + TIGR01212_family_radical_SAM_protein C7V14_03840 QAS83971 579208 581544 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QAS83972 581774 582427 + isoprenoid_biosynthesis_protein_ElbB elbB QAS83973 582424 583152 + monofunctional_biosynthetic_peptidoglycan transglycosylase C7V14_03855 QAS83974 583149 583781 - PhoP_regulatory_network_protein_YrbL yrbL QAS83975 583995 584267 - PTS_phosphocarrier_protein_NPr C7V14_03865 QAS83976 584264 585118 - RNase_adapter_RapZ rapZ QAS83977 585164 585655 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QAS83978 585773 586060 - ribosome_hibernation_promoting_factor C7V14_03880 QAS83979 586083 587516 - RNA_polymerase_factor_sigma-54 C7V14_03885 QAS83980 587564 588289 - lipopolysaccharide_ABC_transporter_ATP-binding protein C7V14_03890 QAS83981 588296 588853 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QAS83982 588822 589397 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QAS83983 589394 589960 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QAS83984 589981 590967 - arabinose-5-phosphate_isomerase_KdsD kdsD QAS83985 590981 591958 - calcium/sodium_antiporter C7V14_03915 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QAS83967 91 696 107.449856734 0.0 PJR32596.1 QAS87614 97 508 100.0 6e-179 PJR32597.1 QAS83965 99 456 100.0 1e-160 PJR32599.1 QAS83963 100 611 100.0 0.0 PJR32600.1 QAS83962 99 536 100.0 0.0 >> 259. CP032426_0 Source: Escherichia coli strain SCEC020001 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2807 Table of genes, locations, strands and annotations of subject cluster: AYC45654 553765 555210 + metalloprotease_TldD tldD AYC45655 555338 556267 - HTH-type_transcriptional_activator_AaeR aaeR AYC45656 556450 556653 + protein_AaeX C7V21_03740 AYC45657 556661 557593 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AYC45658 557599 559566 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AYC45659 559658 559930 + hypothetical_protein C7V21_03755 AYC45660 559986 560249 - DUF1471_domain-containing_protein C7V21_03760 AYC45661 560614 561084 - transcriptional_regulator_ArgR argR AYC45662 561519 562457 + malate_dehydrogenase C7V21_03770 AYC45663 562519 563586 - outer_membrane-stress_sensor_serine endopeptidase DegS C7V21_03775 AYC45664 563676 565043 - periplasmic_pH-dependent_serine_endoprotease DegQ C7V21_03780 AYC45665 565197 565595 - DUF1043_family_protein C7V21_03785 AYC45666 565789 566916 + cell_division_protein_ZapE zapE AYC45667 567135 567563 + 50S_ribosomal_protein_L13 C7V21_03795 AYC45668 567579 567971 + 30S_ribosomal_protein_S9 C7V21_03800 AYC45669 567889 568110 - hypothetical_protein C7V21_03805 AYC45670 568366 569004 + stringent_starvation_protein_A C7V21_03810 AYC45671 569010 569507 + stringent_starvation_protein_B C7V21_03815 AYC45672 569550 570917 - C4-dicarboxylate_transporter_DcuC dcuC AYC45673 571297 572088 + transcriptional_regulator_NanR C7V21_03825 AYC45674 572210 573103 + N-acetylneuraminate_lyase nanA AYC45675 573212 574702 + MFS_transporter C7V21_03835 AYC45676 574750 575439 + N-acetylmannosamine-6-phosphate_2-epimerase C7V21_03840 AYC45677 575436 576311 + ROK_family_protein C7V21_03845 AYC45678 576308 576772 + YhcH/YjgK/YiaL_family_protein C7V21_03850 AYC45679 576832 577959 - DUF1016_domain-containing_protein C7V21_03855 AYC45680 578143 579561 - glutamate_synthase C7V21_03860 AYC45681 579574 584034 - glutamate_synthase_large_subunit C7V21_03865 AYC49537 584709 585638 + TIGR01212_family_radical_SAM_protein C7V21_03870 AYC45682 585734 588070 + hybrid_sensor_histidine_kinase/response regulator C7V21_03875 AYC45683 588300 588953 + glutamine_amidotransferase C7V21_03880 AYC45684 588950 589678 + monofunctional_biosynthetic_peptidoglycan transglycosylase C7V21_03885 AYC45685 589675 590307 - PhoP_regulatory_network_protein_YrbL yrbL AYC45686 590521 590793 - phosphocarrier_protein_NPr C7V21_03895 AYC45687 590790 591644 - RNase_adaptor_protein_RapZ C7V21_03900 AYC45688 591690 592181 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN AYC45689 592299 592586 - ribosome_hibernation_promoting_factor C7V21_03910 AYC45690 592609 594042 - RNA_polymerase_sigma-54_factor C7V21_03915 AYC45691 594090 594815 - ABC_transporter_ATP-binding_protein C7V21_03920 AYC45692 594822 595379 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA AYC45693 595348 595923 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC AYC45694 595920 596486 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC C7V21_03935 AYC45695 596507 597493 - arabinose_5-phosphate_isomerase_KdsD C7V21_03940 AYC45696 597507 598484 - calcium/sodium_antiporter C7V21_03945 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AYC45679 91 696 107.449856734 0.0 PJR32596.1 AYC45677 97 508 100.0 6e-179 PJR32597.1 AYC45676 99 456 100.0 1e-160 PJR32599.1 AYC45674 100 611 100.0 0.0 PJR32600.1 AYC45673 99 536 100.0 0.0 >> 260. CP031231_0 Source: Escherichia coli strain Es_ST410_NW1_NDM_09_2017 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2807 Table of genes, locations, strands and annotations of subject cluster: AXH87548 4356243 4357229 + arabinose_5-phosphate_isomerase_KdsD DVH14_22565 AXH87549 4357250 4357816 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC DVH14_22570 AXH87550 4357813 4358388 + LPS_export_ABC_transporter_periplasmic_protein LptC DVH14_22575 AXH87551 4358357 4358914 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA DVH14_22580 AXH87552 4358921 4359646 + ABC_transporter_ATP-binding_protein DVH14_22585 AXH87553 4359694 4361127 + RNA_polymerase_sigma-54_factor DVH14_22590 AXH87554 4361150 4361437 + ribosome_hibernation_promoting_factor DVH14_22595 AXH87555 4361555 4362046 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN DVH14_22600 AXH87556 4362092 4362946 + RNase_adaptor_protein_RapZ DVH14_22605 AXH87557 4362943 4363215 + phosphocarrier_protein_NPr DVH14_22610 AXH87558 4363429 4364061 + PhoP_regulatory_network_protein_YrbL DVH14_22615 AXH87559 4364058 4364786 - monofunctional_biosynthetic_peptidoglycan transglycosylase DVH14_22620 AXH87560 4364783 4365436 - glutamine_amidotransferase DVH14_22625 AXH87561 4365666 4368002 - hybrid_sensor_histidine_kinase/response regulator DVH14_22630 AXH88116 4368098 4369027 - TIGR01212_family_radical_SAM_protein DVH14_22635 AXH87562 4369419 4369655 - hypothetical_protein DVH14_22640 DVH14_22645 4369553 4369779 - hypothetical_protein no_locus_tag AXH87563 4369702 4374162 + glutamate_synthase_large_subunit DVH14_22650 AXH87564 4374175 4375593 + glutamate_synthase DVH14_22655 AXH87565 4375777 4376904 + DUF1016_domain-containing_protein DVH14_22660 DVH14_22665 4376964 4377432 - YhcH/YjgK/YiaL_family_protein no_locus_tag AXH87566 4377429 4378304 - ROK_family_protein DVH14_22670 AXH87567 4378301 4378990 - N-acetylmannosamine-6-phosphate_2-epimerase DVH14_22675 AXH87568 4379038 4380528 - MFS_transporter DVH14_22680 AXH87569 4380637 4381530 - N-acetylneuraminate_lyase nanA AXH87570 4381652 4382443 - transcriptional_regulator_NanR DVH14_22690 DVH14_22695 4382713 4382823 - transposase no_locus_tag AXH87571 4382823 4384190 + C4-dicarboxylate_transporter_DcuC DVH14_22700 AXH87572 4384233 4384730 - stringent_starvation_protein_B DVH14_22705 AXH87573 4384736 4385374 - stringent_starvation_protein_A DVH14_22710 DVH14_22715 4385316 4385526 + hypothetical_protein no_locus_tag AXH88117 4385478 4385657 - hypothetical_protein DVH14_22720 AXH87574 4385631 4385852 + hypothetical_protein DVH14_22725 AXH87575 4385770 4386162 - 30S_ribosomal_protein_S9 DVH14_22730 AXH87576 4386178 4386606 - 50S_ribosomal_protein_L13 DVH14_22735 AXH87577 4386825 4387952 - cell_division_protein_ZapE DVH14_22740 AXH87578 4388146 4388544 + DUF1043_family_protein DVH14_22745 AXH87579 4388698 4390065 + periplasmic_pH-dependent_serine_endoprotease DegQ DVH14_22750 AXH87580 4390155 4391222 + outer_membrane-stress_sensor_serine endopeptidase DegS DVH14_22755 AXH87581 4391284 4392222 - malate_dehydrogenase DVH14_22760 AXH87582 4392657 4393127 + transcriptional_regulator_ArgR DVH14_22765 AXH87583 4393492 4393755 + DUF1471_domain-containing_protein DVH14_22770 AXH87584 4393811 4394083 - hypothetical_protein DVH14_22775 DVH14_22780 4394175 4396141 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB no_locus_tag AXH87585 4396147 4397079 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DVH14_22785 AXH87586 4397087 4397290 - protein_AaeX DVH14_22790 DVH14_22795 4397473 4398401 + HTH-type_transcriptional_activator_AaeR no_locus_tag AXH87587 4398529 4399974 - metalloprotease_TldD DVH14_22800 AXH87588 4400130 4403930 - AsmA2_domain-containing_protein DVH14_22805 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AXH87565 91 696 107.449856734 0.0 PJR32596.1 AXH87566 97 508 100.0 6e-179 PJR32597.1 AXH87567 99 456 100.0 1e-160 PJR32599.1 AXH87569 100 611 100.0 0.0 PJR32600.1 AXH87570 99 536 100.0 0.0 >> 261. CP026473_0 Source: Escherichia coli strain KBN10P04869 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2807 Table of genes, locations, strands and annotations of subject cluster: AUY27731 547642 549087 + Protease_TldD YKEC1_0526 AUY27732 549215 550144 - HTH-type_transcriptional_activator_AaeR YKEC1_0527 AUY27733 550538 551470 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA YKEC1_0529 AUY27734 551476 553443 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB YKEC1_0530 AUY27735 553535 553807 + hypothetical_protein YKEC1_0531 AUY27736 553863 554126 - Membrane_protein YKEC1_0532 AUY27737 554491 554961 - Arginine_repressor YKEC1_0533 AUY27738 555396 556334 + Malate_dehydrogenase YKEC1_0534 AUY27739 556396 557463 - Periplasmic_serine_peptidase_DegS YKEC1_0535 AUY27740 557553 558920 - serine_endoprotease_DegQ YKEC1_0536 AUY27741 559074 559472 - Inner_membrane_protein_YhcB YKEC1_0537 AUY27742 559666 560793 + hypothetical_protein YKEC1_0538 AUY27743 561012 561440 + 50S_ribosomal_protein_L13 YKEC1_0539 AUY27744 561456 561848 + 30S_ribosomal_protein_S9 YKEC1_0540 AUY27745 562243 562881 + Stringent_starvation_protein_A YKEC1_0541 AUY27746 562887 563384 + Stringent_starvation_B_family_protein YKEC1_0542 AUY27747 563427 564794 - Anaerobic_C4-dicarboxylate_uptake_C_family transporter YKEC1_0543 AUY27748 565174 565965 + Transcriptional_regulator_NanR YKEC1_0544 AUY27749 566087 566980 + N-acetylneuraminate_lyase YKEC1_0545 AUY27750 567089 568579 + Putative_sialic_acid_transporter YKEC1_0546 AUY27751 568627 569316 + Putative_N-acetylmannosamine-6-phosphate 2-epimerase YKEC1_0547 AUY27752 569313 570188 + N-acetylmannosamine_kinase YKEC1_0548 AUY27753 570185 570649 + hypothetical_protein YKEC1_0549 AUY27754 570709 571836 - hypothetical_protein YKEC1_0550 AUY27755 572020 573438 - Glutamate_synthase_small_chain YKEC1_0551 AUY27756 573451 578004 - Glutamate_synthase_large_chain YKEC1_0552 AUY27757 578586 579515 + Radical_SAM_superfamily_protein YKEC1_0553 AUY27758 579611 581947 + Aerobic_respiration_control_sensor_protein_ArcB YKEC1_0554 AUY27759 582177 582830 + Sigma_cross-reacting_protein YKEC1_0555 AUY27760 582827 583555 + Monofunctional_biosynthetic_peptidoglycan transglycosylase YKEC1_0556 AUY27761 583552 584184 - PhoP_regulatory_network_YrbL_family_protein YKEC1_0557 AUY27762 584398 584670 - Phosphocarrier_protein_NPr YKEC1_0558 AUY27763 584667 585521 - hypothetical_protein YKEC1_0559 AUY27764 585567 586058 - Nitrogen_regulatory_protein YKEC1_0560 AUY27765 586176 586463 - Ribosome_hibernation_promoting_factor YKEC1_0561 AUY27766 586486 587919 - RNA_polymerase_sigma-54_factor YKEC1_0562 AUY27767 587967 588692 - Lipopolysaccharide_export_system_ATP-binding protein LptB YKEC1_0563 AUY27768 588699 589256 - Lipopolysaccharide_export_system_protein_LptA YKEC1_0564 AUY27769 589225 589800 - Lipopolysaccharide_export_system_protein_LptC YKEC1_0565 AUY27770 589797 590363 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC YKEC1_0566 AUY27771 590384 591370 - Arabinose_5-phosphate_isomerase_KdsD YKEC1_0567 AUY27772 591384 592361 - Inner_membrane_protein_yrbG YKEC1_0568 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AUY27754 91 696 107.449856734 0.0 PJR32596.1 AUY27752 97 508 100.0 6e-179 PJR32597.1 AUY27751 99 456 100.0 1e-160 PJR32599.1 AUY27749 100 611 100.0 0.0 PJR32600.1 AUY27748 99 536 100.0 0.0 >> 262. CP018965_0 Source: Escherichia coli strain Ecol_517 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2807 Table of genes, locations, strands and annotations of subject cluster: AQV40681 1911148 1912593 + metalloprotease_TldD BE959_11205 AQV40682 1912721 1913650 - HTH-type_transcriptional_activator_AaeR BE959_11210 AQV40683 1913833 1914036 + protein_AaeX BE959_11215 AQV40684 1914044 1914976 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA BE959_11220 AQV40685 1914982 1916949 + p-hydroxybenzoic_acid_efflux_subunit_AaeB BE959_11225 AQV40686 1917041 1917313 + hypothetical_protein BE959_11230 AQV40687 1917369 1917632 - hypothetical_protein BE959_11235 AQV40688 1917997 1918467 - arginine_repressor BE959_11240 AQV40689 1918902 1919840 + malate_dehydrogenase BE959_11245 AQV40690 1919902 1920969 - outer_membrane-stress_sensor_serine endopeptidase DegS BE959_11250 AQV40691 1921059 1922426 - periplasmic_pH-dependent_serine_endoprotease DegQ BE959_11255 AQV40692 1922580 1922978 - hypothetical_protein BE959_11260 AQV40693 1923172 1924299 + cell_division_protein_ZapE BE959_11265 AQV40694 1924518 1924946 + 50S_ribosomal_protein_L13 BE959_11270 AQV40695 1924962 1925354 + 30S_ribosomal_protein_S9 BE959_11275 AQV40696 1925749 1926387 + stringent_starvation_protein_A sspA AQV40697 1926393 1926890 + stringent_starvation_protein_B BE959_11285 AQV40698 1926933 1928300 - C4-dicarboxylate_transporter BE959_11290 BE959_11295 1928300 1928410 + transposase no_locus_tag AQV40699 1928680 1929471 + transcriptional_regulator_NanR BE959_11300 AQV40700 1929593 1930486 + N-acetylneuraminate_lyase BE959_11305 AQV40701 1930595 1932085 + MFS_transporter BE959_11310 AQV40702 1932133 1932822 + N-acetylmannosamine-6-phosphate_2-epimerase BE959_11315 AQV40703 1932819 1933694 + N-acetylmannosamine_kinase BE959_11320 AQV40704 1933691 1934155 + hypothetical_protein BE959_11325 AQV40705 1934215 1935342 - hypothetical_protein BE959_11330 AQV40706 1935526 1936944 - glutamate_synthase BE959_11335 AQV40707 1936957 1941525 - glutamate_synthase BE959_11340 AQV40708 1941464 1941700 + hypothetical_protein BE959_11345 AQV43499 1942092 1943021 + TIGR01212_family_radical_SAM_protein BE959_11350 AQV40709 1943117 1945453 + hybrid_sensor_histidine_kinase/response regulator BE959_11355 AQV40710 1945683 1946336 + glutamine_amidotransferase BE959_11360 AQV40711 1946333 1947061 + monofunctional_biosynthetic_peptidoglycan transglycosylase BE959_11365 AQV40712 1947058 1947690 - hypothetical_protein BE959_11370 AQV40713 1947904 1948176 - phosphocarrier_protein_NPr BE959_11375 AQV40714 1948173 1949027 - RNase_adaptor_protein_RapZ BE959_11380 AQV40715 1949073 1949564 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN BE959_11385 AQV40716 1949682 1949969 - ribosome_hibernation_promoting_factor BE959_11390 AQV40717 1949992 1951425 - RNA_polymerase_sigma-54_factor BE959_11395 AQV40718 1951473 1952198 - ABC_transporter_ATP-binding_protein BE959_11400 AQV40719 1952205 1952762 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA BE959_11405 AQV40720 1952731 1953306 - LPS_export_ABC_transporter_periplasmic_protein LptC BE959_11410 AQV40721 1953303 1953869 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC BE959_11415 AQV40722 1953890 1954876 - arabinose_5-phosphate_isomerase_KdsD BE959_11420 AQV40723 1954890 1955867 - calcium/sodium_antiporter BE959_11425 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AQV40705 91 696 107.449856734 0.0 PJR32596.1 AQV40703 97 508 100.0 6e-179 PJR32597.1 AQV40702 99 456 100.0 1e-160 PJR32599.1 AQV40700 100 611 100.0 0.0 PJR32600.1 AQV40699 99 536 100.0 0.0 >> 263. CP048439_0 Source: Escherichia coli strain NBRC 3301 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: QIA37671 486674 488119 + metalloprotease_TldD tldD QIA37672 488253 489182 - HTH-type_transcriptional_activator_AaeR aaeR QIA37673 489365 489568 + AaeX_family_protein GXM24_02335 QIA37674 489576 490508 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QIA37675 490514 492481 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIA37676 492573 492845 + hypothetical_protein GXM24_02350 QIA37677 492901 493164 - peroxide/acid_stress_response_protein_YhcN yhcN QIA37678 493529 493999 - transcriptional_regulator_ArgR argR QIA37679 494434 495372 + malate_dehydrogenase mdh QIA37680 495435 496502 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QIA37681 496592 497959 - serine_endoprotease_DegQ degQ QIA37682 498113 498511 - DUF1043_family_protein GXM24_02380 QIA37683 498705 499832 + cell_division_protein_ZapE GXM24_02385 QIA37684 500051 500479 + 50S_ribosomal_protein_L13 rplM QIA37685 500495 500887 + 30S_ribosomal_protein_S9 rpsI QIA37686 501282 501920 + stringent_starvation_protein_A sspA QIA37687 501926 502423 + ClpXP_protease_specificity-enhancing_factor sspB QIA37688 502466 503833 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIA37689 504213 505004 + transcriptional_regulator_NanR nanR QIA37690 505126 506019 + N-acetylneuraminate_lyase nanA QIA37691 506128 507618 + sialic_acid_transporter_NanT nanT QIA37692 507666 508355 + N-acetylmannosamine-6-phosphate_2-epimerase GXM24_02430 QIA37693 508352 509227 + N-acetylmannosamine_kinase GXM24_02435 QIA37694 509224 509688 + DUF386_domain-containing_protein GXM24_02440 QIA37695 509748 510875 - DUF1016_domain-containing_protein GXM24_02445 QIA37696 511060 511776 - DUF1120_domain-containing_protein GXM24_02450 GXM24_02455 511773 511974 - hypothetical_protein no_locus_tag QIA37697 511984 513000 + IS5-like_element_IS5_family_transposase GXM24_02460 GXM24_02465 513149 513517 - hypothetical_protein no_locus_tag QIA37698 513514 515895 - fimbrial_biogenesis_outer_membrane_usher protein GXM24_02470 QIA37699 515916 516590 - fimbria/pilus_periplasmic_chaperone GXM24_02475 QIA37700 516762 517526 - DUF1120_domain-containing_protein GXM24_02480 QIA37701 518086 519504 - glutamate_synthase GXM24_02485 QIA41342 519517 523977 - glutamate_synthase_large_subunit gltB QIA37702 524652 525581 + TIGR01212_family_radical_SAM_protein GXM24_02495 QIA37703 525677 528013 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIA37704 528243 528896 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIA37705 528893 529621 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QIA37706 529618 530250 - PhoP_regulatory_network_protein_YrbL yrbL QIA37707 530464 530736 - PTS_phosphocarrier_protein_NPr npr QIA37708 530733 531587 - RNase_adapter_RapZ rapZ Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QIA37695 90 682 107.449856734 0.0 PJR32596.1 QIA37693 97 507 100.0 1e-178 PJR32597.1 QIA37692 99 456 100.0 1e-160 PJR32599.1 QIA37690 100 611 100.0 0.0 PJR32600.1 QIA37689 99 536 100.0 0.0 >> 264. CP047594_0 Source: Escherichia coli strain LD27-1 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: QHI94103 3944115 3944969 + RNase_adapter_RapZ rapZ QHI94104 3944966 3945238 + PTS_phosphocarrier_protein_NPr npr QHI94105 3945452 3946084 + PhoP_regulatory_network_protein_YrbL yrbL QHI94106 3946081 3946809 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHI94107 3946806 3947459 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHI94108 3947689 3950025 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHI94109 3950121 3951050 - TIGR01212_family_radical_SAM_protein GUU88_19190 QHI94916 3951725 3956185 + glutamate_synthase_large_subunit gltB QHI94110 3956198 3957616 + glutamate_synthase GUU88_19200 QHI94111 3958176 3958940 + DUF1120_domain-containing_protein GUU88_19205 QHI94112 3959112 3959786 + fimbria/pilus_periplasmic_chaperone GUU88_19210 QHI94917 3959824 3962187 + fimbrial_biogenesis_usher_protein GUU88_19215 QHI94113 3962184 3962729 + hypothetical_protein GUU88_19220 QHI94114 3962726 3963442 + DUF1120_domain-containing_protein GUU88_19225 QHI94115 3963627 3964754 + DUF1016_family_protein GUU88_19230 QHI94116 3964814 3965278 - YhcH/YjgK/YiaL_family_protein GUU88_19235 QHI94117 3965275 3966150 - ROK_family_protein GUU88_19240 QHI94118 3966147 3966836 - putative_N-acetylmannosamine-6-phosphate 2-epimerase GUU88_19245 QHI94119 3966884 3968374 - sialic_acid_transporter_NanT nanT QHI94120 3968483 3969376 - N-acetylneuraminate_lyase nanA QHI94121 3969498 3970289 - transcriptional_regulator_NanR nanR QHI94122 3970669 3972036 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHI94123 3972079 3972576 - ClpXP_protease_specificity-enhancing_factor sspB QHI94124 3972582 3973220 - stringent_starvation_protein_A sspA QHI94125 3973615 3974007 - 30S_ribosomal_protein_S9 rpsI QHI94126 3974023 3974451 - 50S_ribosomal_protein_L13 rplM QHI94127 3974670 3975797 - cell_division_protein_ZapE zapE QHI94128 3975991 3976389 + DUF1043_family_protein GUU88_19295 QHI94129 3976543 3977910 + serine_endoprotease_DegQ degQ QHI94130 3978000 3979067 + outer_membrane-stress_sensor_serine endopeptidase DegS degS QHI94131 3979130 3980068 - malate_dehydrogenase mdh QHI94132 3980503 3980973 + transcriptional_regulator_ArgR argR QHI94133 3981338 3981601 + peroxide/acid_stress_response_protein_YhcN yhcN QHI94134 3981657 3981929 - hypothetical_protein GUU88_19325 QHI94135 3982021 3983988 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHI94136 3983994 3984926 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHI94137 3984934 3985137 - DUF1656_domain-containing_protein GUU88_19340 QHI94138 3985320 3986249 + HTH-type_transcriptional_activator_AaeR aaeR QHI94139 3986383 3987828 - metalloprotease_TldD tldD QHI94140 3988258 3992058 - AsmA2_domain-containing_protein GUU88_19355 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHI94115 90 682 107.449856734 0.0 PJR32596.1 QHI94117 97 507 100.0 1e-178 PJR32597.1 QHI94118 99 456 100.0 1e-160 PJR32599.1 QHI94120 100 611 100.0 0.0 PJR32600.1 QHI94121 99 536 100.0 0.0 >> 265. CP047127_0 Source: Escherichia coli K-12 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: QHB67632 2361593 2363038 + metalloprotease_TldD tldD QHB67633 2363172 2364101 - HTH-type_transcriptional_activator_AaeR aaeR QHB67634 2364284 2364487 + DUF1656_domain-containing_protein GRF62_11270 QHB67635 2364495 2365427 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHB67636 2365433 2367400 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHB67637 2367492 2367764 + hypothetical_protein GRF62_11285 QHB67638 2367820 2368083 - peroxide/acid_stress_response_protein_YhcN yhcN QHB67639 2368448 2368918 - transcriptional_regulator_ArgR argR QHB67640 2369353 2370291 + malate_dehydrogenase mdh QHB67641 2370354 2371421 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QHB67642 2371511 2372878 - serine_endoprotease_DegQ degQ QHB67643 2373032 2373430 - DUF1043_family_protein GRF62_11315 QHB67644 2373624 2374751 + cell_division_protein_ZapE zapE QHB67645 2374970 2375398 + 50S_ribosomal_protein_L13 rplM QHB67646 2375414 2375806 + 30S_ribosomal_protein_S9 rpsI QHB67647 2376201 2376839 + stringent_starvation_protein_A sspA QHB67648 2376845 2377342 + ClpXP_protease_specificity-enhancing_factor sspB QHB67649 2377385 2378752 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHB67650 2379132 2379923 + transcriptional_regulator_NanR nanR QHB67651 2380045 2380938 + N-acetylneuraminate_lyase nanA QHB67652 2381047 2382537 + sialic_acid_transporter_NanT nanT QHB67653 2382585 2383274 + putative_N-acetylmannosamine-6-phosphate 2-epimerase GRF62_11365 QHB67654 2383271 2384146 + ROK_family_protein GRF62_11370 QHB67655 2384143 2384607 + YhcH/YjgK/YiaL_family_protein GRF62_11375 QHB67656 2384667 2385794 - DUF1016_family_protein GRF62_11380 QHB67657 2385979 2386695 - DUF1120_domain-containing_protein GRF62_11385 GRF62_11390 2386692 2386893 - hypothetical_protein no_locus_tag GRF62_11395 2386903 2387918 + IS5-like_element_IS5_family_transposase no_locus_tag GRF62_11400 2388067 2388435 - hypothetical_protein no_locus_tag QHB67658 2388432 2390813 - fimbrial_biogenesis_usher_protein GRF62_11405 QHB67659 2390834 2391508 - fimbria/pilus_periplasmic_chaperone GRF62_11410 QHB67660 2391680 2392444 - DUF1120_domain-containing_protein GRF62_11415 QHB67661 2393004 2394422 - glutamate_synthase GRF62_11420 QHB69637 2394435 2398895 - glutamate_synthase_large_subunit gltB QHB67662 2399570 2400499 + TIGR01212_family_radical_SAM_protein GRF62_11430 QHB67663 2400595 2402931 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHB67664 2403161 2403814 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHB67665 2403811 2404539 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHB67666 2404536 2405168 - PhoP_regulatory_network_protein_YrbL yrbL QHB67667 2405382 2405654 - PTS_phosphocarrier_protein_NPr npr QHB67668 2405651 2406505 - RNase_adapter_RapZ rapZ Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHB67656 90 682 107.449856734 0.0 PJR32596.1 QHB67654 97 507 100.0 1e-178 PJR32597.1 QHB67653 99 456 100.0 1e-160 PJR32599.1 QHB67651 100 611 100.0 0.0 PJR32600.1 QHB67650 99 536 100.0 0.0 >> 266. CP045457_0 Source: Escherichia coli strain ET12567 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: QFU36432 3434919 3435191 + Phosphocarrier_protein_NPr ptsO QFU36433 3435405 3436037 + hypothetical_protein ECET_17270 QFU36434 3436034 3436762 - Penicillin-binding_protein_2D pbpG2 QFU36435 3436759 3437412 - Enhancing_lycopene_biosynthesis_protein_2 elbB QFU36436 3437642 3439978 - Aerobic_respiration_control_sensor_protein_ArcB arcB QFU36437 3440074 3441003 - coproporphyrinogen_III_oxidase ECET_17295 QFU36438 3441585 3446138 + Glutamate_synthase_[NADPH]_large_chain precursor gltB QFU36439 3446151 3447569 + Glutamate_synthase_[NADPH]_small_chain gltD4 QFU36440 3448129 3448893 + hypothetical_protein ECET_17310 QFU36441 3449065 3449739 + putative_fimbrial_chaperone_protein ECET_17315 QFU36442 3449760 3452141 + F1_capsule-anchoring_protein_precursor caf1A QFU36443 3452138 3452617 + hypothetical_protein ECET_17325 QFU36444 3452655 3453635 - Transposase_DDE_domain_protein ECET_17330 QFU36445 3453637 3453882 + hypothetical_protein ECET_17335 QFU36446 3453879 3454595 + hypothetical_protein ECET_17340 QFU36447 3454780 3455907 + hypothetical_protein ECET_17345 QFU36448 3455967 3456431 - Toxin-antitoxin_biofilm_protein_TabA tabA1 QFU36449 3456428 3457303 - N-acetylmannosamine_kinase nanK2 QFU36450 3457300 3457989 - Putative_N-acetylmannosamine-6-phosphate 2-epimerase nanE QFU36451 3458037 3459527 - Putative_sialic_acid_transporter nanT1 QFU36452 3459636 3460529 - N-acetylneuraminate_lyase nanA QFU36453 3460651 3461442 - HTH-type_transcriptional_regulator_LutR lutR1 QFU36454 3461822 3463189 + Putative_cryptic_C4-dicarboxylate_transporter DcuD dcuD2 QFU36455 3463232 3463729 - Stringent_starvation_protein_B sspB QFU36456 3463735 3464067 - Stringent_starvation_protein_A sspA1 QFU36457 3464174 3465382 + Transposase_DDE_domain_protein ECET_17400 QFU36458 3465361 3465711 - Stringent_starvation_protein_A sspA2 QFU36459 3466106 3466498 - 30S_ribosomal_protein_S9 rpsI QFU36460 3466514 3466942 - 50S_ribosomal_protein_L13 rplM QFU36461 3467161 3468288 - AFG1-like_ATPase ECET_17420 QFU36462 3468482 3468880 + Inner_membrane_protein_YhcB yhcB QFU36463 3469034 3470401 + Periplasmic_pH-dependent_serine_endoprotease DegQ precursor degQ QFU36464 3470491 3471558 + Serine_endoprotease_DegS degS QFU36465 3471621 3472559 - Malate_dehydrogenase mdh2 QFU36466 3472994 3473464 + Arginine_repressor argR QFU36467 3473829 3474092 + Multiple_stress_resistance_protein_BhsA precursor bhsA5 QFU36468 3474148 3474420 - Barstar_(barnase_inhibitor) ECET_17455 QFU36469 3474512 3476479 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB2 QFU36470 3476485 3477417 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA2 QFU36471 3477425 3477628 - efflux_system_membrane_protein ECET_17470 QFU36472 3477811 3478740 + HTH-type_transcriptional_regulator_DmlR dmlR6 QFU36473 3478874 3480319 - protease_TldD ECET_17480 QFU36474 3480749 3484549 - hypothetical_protein ECET_17485 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QFU36447 90 682 107.449856734 0.0 PJR32596.1 QFU36449 97 507 100.0 1e-178 PJR32597.1 QFU36450 99 456 100.0 1e-160 PJR32599.1 QFU36452 100 611 100.0 0.0 PJR32600.1 QFU36453 99 536 100.0 0.0 >> 267. CP040667_0 Source: Escherichia coli strain S17-1 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: QCW44841 27001 28446 + metalloprotease_TldD tldD QCW44842 28580 29509 - HTH-type_transcriptional_activator_AaeR aaeR QCW44843 29692 29895 + DUF1656_domain-containing_protein FGH86_00120 QCW44844 29903 30835 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCW44845 30841 32808 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCW44846 32900 33172 + hypothetical_protein FGH86_00135 QCW44847 33228 33491 - peroxide/acid_stress_response_protein_YhcN yhcN QCW44848 33856 34326 - transcriptional_regulator_ArgR argR QCW44849 34761 35699 + malate_dehydrogenase mdh QCW44850 35762 36829 - serine_endoprotease_DegS FGH86_00155 QCW44851 36919 38286 - serine_endoprotease_DegQ degQ QCW44852 38440 38838 - DUF1043_family_protein FGH86_00165 QCW44853 39032 40159 + cell_division_protein_ZapE FGH86_00170 QCW44854 40378 40806 + 50S_ribosomal_protein_L13 rplM QCW44855 40822 41214 + 30S_ribosomal_protein_S9 rpsI QCW44856 41609 42247 + stringent_starvation_protein_A sspA QCW44857 42253 42750 + ClpXP_protease_specificity-enhancing_factor sspB QCW44858 42793 44160 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QCW44859 44540 45331 + transcriptional_regulator_NanR nanR QCW44860 45453 46346 + N-acetylneuraminate_lyase nanA QCW44861 46455 47945 + sialic_acid_transporter_NanT nanT QCW44862 47993 48682 + N-acetylmannosamine-6-phosphate_2-epimerase FGH86_00215 QCW44863 48679 49554 + N-acetylmannosamine_kinase FGH86_00220 QCW44864 49551 50015 + DUF386_domain-containing_protein FGH86_00225 QCW44865 50075 51202 - DUF1016_domain-containing_protein FGH86_00230 QCW44866 51387 52103 - DUF1120_domain-containing_protein FGH86_00235 FGH86_00240 52100 52301 - hypothetical_protein no_locus_tag QCW44867 52311 53327 + IS5-like_element_IS5_family_transposase FGH86_00245 FGH86_00250 53476 53844 - hypothetical_protein no_locus_tag QCW44868 53841 56222 - fimbrial_biogenesis_outer_membrane_usher protein FGH86_00255 QCW44869 56243 56917 - fimbrial_chaperone_protein FGH86_00260 QCW44870 57089 57853 - DUF1120_domain-containing_protein FGH86_00265 QCW44871 58413 59831 - glutamate_synthase FGH86_00270 QCW49034 59844 64304 - glutamate_synthase_large_subunit gltB QCW44872 64979 65908 + TIGR01212_family_radical_SAM_protein FGH86_00280 QCW44873 66004 68340 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QCW44874 68570 69223 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QCW44875 69220 69948 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QCW44876 69945 70577 - PhoP_regulatory_network_protein_YrbL yrbL QCW44877 70791 71063 - PTS_phosphocarrier_protein_NPr npr QCW44878 71060 71914 - RNase_adapter_RapZ rapZ Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCW44865 90 682 107.449856734 0.0 PJR32596.1 QCW44863 97 507 100.0 1e-178 PJR32597.1 QCW44862 99 456 100.0 1e-160 PJR32599.1 QCW44860 100 611 100.0 0.0 PJR32600.1 QCW44859 99 536 100.0 0.0 >> 268. CP040664_0 Source: Escherichia coli strain KR2009 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: QCW31891 3309547 3309819 + PTS_phosphocarrier_protein_NPr npr QCW31892 3310033 3310665 + PhoP_regulatory_network_protein_YrbL yrbL QCW31893 3310662 3311390 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QCW31894 3311387 3312040 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QCW31895 3312270 3314606 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QCW31896 3314702 3315631 - TIGR01212_family_radical_SAM_protein FE384_16225 QCW33121 3316306 3320766 + glutamate_synthase_large_subunit gltB QCW31897 3320779 3322197 + glutamate_synthase FE384_16235 QCW31898 3322757 3323521 + DUF1120_domain-containing_protein FE384_16240 QCW31899 3323693 3324367 + fimbrial_chaperone_protein FE384_16245 QCW31900 3324388 3326769 + fimbrial_biogenesis_outer_membrane_usher protein FE384_16250 FE384_16255 3326766 3327134 + hypothetical_protein no_locus_tag QCW31901 3327283 3328263 - IS5-like_element_IS5_family_transposase FE384_16260 QCW31902 3328439 3329155 + DUF1120_domain-containing_protein FE384_16265 QCW31903 3329340 3330467 + DUF1016_domain-containing_protein FE384_16270 QCW31904 3330527 3330991 - DUF386_domain-containing_protein FE384_16275 QCW31905 3330988 3331863 - N-acetylmannosamine_kinase FE384_16280 QCW31906 3331860 3332549 - N-acetylmannosamine-6-phosphate_2-epimerase FE384_16285 QCW31907 3332597 3334087 - sialic_acid_transporter_NanT nanT QCW31908 3334196 3335089 - N-acetylneuraminate_lyase nanA QCW31909 3335211 3336002 - transcriptional_regulator_NanR nanR QCW31910 3337793 3338290 - ClpXP_protease_specificity-enhancing_factor sspB QCW31911 3338296 3338934 - stringent_starvation_protein_A sspA QCW31912 3339329 3339721 - 30S_ribosomal_protein_S9 rpsI QCW31913 3339737 3340165 - 50S_ribosomal_protein_L13 rplM QCW31914 3340384 3341511 - cell_division_protein_ZapE FE384_16330 QCW31915 3341705 3342103 + DUF1043_family_protein FE384_16335 QCW31916 3342257 3343624 + serine_endoprotease_DegQ degQ QCW31917 3343714 3344781 + serine_endoprotease_DegS FE384_16345 QCW31918 3344844 3345782 - malate_dehydrogenase mdh QCW31919 3346217 3346687 + transcriptional_regulator_ArgR argR QCW31920 3347052 3347315 + peroxide/acid_stress_response_protein_YhcN yhcN QCW31921 3347371 3347643 - hypothetical_protein FE384_16365 QCW31922 3347735 3349702 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCW31923 3349708 3350640 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCW31924 3350648 3350851 - DUF1656_domain-containing_protein FE384_16380 QCW31925 3351034 3351963 + HTH-type_transcriptional_activator_AaeR aaeR QCW31926 3352097 3353542 - metalloprotease_TldD tldD QCW31927 3353972 3357772 - AsmA2_domain-containing_protein FE384_16395 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCW31903 90 682 107.449856734 0.0 PJR32596.1 QCW31905 97 507 100.0 1e-178 PJR32597.1 QCW31906 99 456 100.0 1e-160 PJR32599.1 QCW31908 100 611 100.0 0.0 PJR32600.1 QCW31909 99 536 100.0 0.0 >> 269. CP037857_0 Source: Escherichia coli BW25113 strain AM187 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: QBM95411 3340987 3341259 + PTS_phosphocarrier_protein_NPr E1A98_16365 QBM95412 3341473 3342105 + PhoP_regulatory_network_protein_YrbL yrbL QBM95413 3342102 3342830 - monofunctional_biosynthetic_peptidoglycan transglycosylase E1A98_16375 QBM95414 3342827 3343480 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QBM95415 3343710 3346046 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QBM95416 3346142 3347071 - TIGR01212_family_radical_SAM_protein E1A98_16390 QBM95417 3347746 3352206 + glutamate_synthase_large_subunit gltB QBM95418 3352219 3353637 + glutamate_synthase E1A98_16400 QBM95419 3354197 3354961 + DUF1120_domain-containing_protein E1A98_16405 QBM95420 3355133 3355807 + fimbrial_chaperone_protein E1A98_16410 QBM95421 3355828 3358209 + fimbrial_biogenesis_outer_membrane_usher protein E1A98_16415 E1A98_16420 3358206 3358574 + hypothetical_protein no_locus_tag QBM95422 3358723 3359739 - IS5-like_element_IS5_family_transposase E1A98_16425 E1A98_16430 3359749 3359950 + hypothetical_protein no_locus_tag QBM95423 3359947 3360663 + DUF1120_domain-containing_protein E1A98_16435 QBM95424 3360848 3361975 + DUF1016_domain-containing_protein E1A98_16440 QBM95425 3362035 3362499 - YhcH/YjgK/YiaL_family_protein E1A98_16445 QBM95426 3362496 3363371 - N-acetylmannosamine_kinase E1A98_16450 QBM95427 3363368 3364057 - N-acetylmannosamine-6-phosphate_2-epimerase E1A98_16455 QBM95428 3364105 3365595 - sialic_acid_transporter_NanT nanT QBM95429 3365704 3366597 - N-acetylneuraminate_lyase nanA QBM95430 3366719 3367510 - transcriptional_regulator_NanR nanR QBM95431 3367890 3369257 + C4-dicarboxylate_transporter_DcuC dcuC QBM95432 3369300 3369797 - ClpXP_protease_specificity-enhancing_factor sspB QBM95433 3369803 3370441 - stringent_starvation_protein_A E1A98_16485 QBM95434 3370836 3371228 - 30S_ribosomal_protein_S9 E1A98_16490 QBM95435 3371244 3371672 - 50S_ribosomal_protein_L13 E1A98_16495 QBM95436 3371891 3373018 - cell_division_protein_ZapE E1A98_16500 QBM95437 3373212 3373610 + DUF1043_family_protein E1A98_16505 QBM95438 3373764 3375131 + serine_endoprotease_DegQ degQ QBM95439 3375221 3376288 + serine_endoprotease_DegS degS QBM95440 3376351 3377289 - malate_dehydrogenase E1A98_16520 QBM95441 3377724 3378194 + transcriptional_regulator_ArgR argR QBM95442 3378559 3378822 + peroxide/acid_stress_response_protein_YhcN yhcN QBM95443 3378878 3379150 - hypothetical_protein E1A98_16535 QBM95444 3379242 3381209 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QBM95445 3381215 3382147 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QBM95446 3382155 3382358 - DUF1656_domain-containing_protein E1A98_16550 QBM95447 3382541 3383470 + HTH-type_transcriptional_activator_AaeR aaeR QBM95448 3383604 3385049 - metalloprotease_TldD tldD QBM95449 3385479 3389279 - AsmA2_domain-containing_protein E1A98_16565 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QBM95424 90 682 107.449856734 0.0 PJR32596.1 QBM95426 97 507 100.0 1e-178 PJR32597.1 QBM95427 99 456 100.0 1e-160 PJR32599.1 QBM95429 100 611 100.0 0.0 PJR32600.1 QBM95430 99 536 100.0 0.0 >> 270. CP031214_0 Source: Escherichia coli strain C600 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: AXL16165 535247 536692 + metalloprotease_TldD DK885_02740 AXL16166 536826 537755 - HTH-type_transcriptional_activator_AaeR DK885_02745 AXL16167 537938 538141 + protein_AaeX DK885_02750 AXL16168 538149 539081 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DK885_02755 AXL16169 539087 541054 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DK885_02760 AXL16170 541146 541418 + hypothetical_protein DK885_02765 AXL16171 541474 541737 - DUF1471_domain-containing_protein DK885_02770 AXL16172 542102 542572 - transcriptional_regulator_ArgR DK885_02775 AXL16173 543007 543945 + malate_dehydrogenase DK885_02780 AXL16174 544008 545075 - outer_membrane-stress_sensor_serine endopeptidase DegS DK885_02785 AXL16175 545165 546532 - periplasmic_pH-dependent_serine_endoprotease DegQ DK885_02790 AXL16176 546686 547084 - DUF1043_family_protein DK885_02795 AXL16177 547278 548405 + cell_division_protein_ZapE DK885_02800 AXL16178 548624 549052 + 50S_ribosomal_protein_L13 DK885_02805 AXL16179 549068 549460 + 30S_ribosomal_protein_S9 DK885_02810 AXL19913 549704 549913 - hypothetical_protein DK885_02815 AXL16180 549855 550493 + stringent_starvation_protein_A DK885_02820 AXL16181 550499 550996 + stringent_starvation_protein_B DK885_02825 AXL16182 551039 552406 - C4-dicarboxylate_transporter_DcuC DK885_02830 DK885_02835 552406 552516 + transposase no_locus_tag AXL16183 552786 553577 + transcriptional_regulator_NanR DK885_02840 AXL16184 553699 554592 + N-acetylneuraminate_lyase nanA AXL16185 554701 556191 + MFS_transporter DK885_02850 AXL16186 556239 556928 + N-acetylmannosamine-6-phosphate_2-epimerase DK885_02855 AXL16187 556925 557800 + ROK_family_protein DK885_02860 AXL16188 557797 558261 + YhcH/YjgK/YiaL_family_protein DK885_02865 AXL16189 558321 559448 - DUF1016_domain-containing_protein DK885_02870 AXL16190 559633 560349 - DUF1120_domain-containing_protein DK885_02875 AXL16191 560346 560594 - hypothetical_protein DK885_02880 AXL16192 560557 561573 + IS5-like_element_IS5_family_transposase DK885_02885 DK885_02890 561722 562090 - hypothetical_protein no_locus_tag AXL16193 562087 564468 - fimbrial_biogenesis_outer_membrane_usher protein DK885_02895 AXL16194 564489 565163 - fimbrial_chaperone_protein DK885_02900 AXL16195 565335 566099 - glutamate_synthase_operon_protein_GltF DK885_02905 AXL16196 566220 566504 - hypothetical_protein DK885_02910 AXL16197 566659 568077 - glutamate_synthase DK885_02915 AXL16198 568090 572550 - glutamate_synthase_large_subunit DK885_02920 DK885_02925 572473 572699 + hypothetical_protein no_locus_tag AXL16199 572597 572833 + hypothetical_protein DK885_02930 AXL19914 573225 574154 + TIGR01212_family_radical_SAM_protein DK885_02935 AXL16200 574250 576586 + hybrid_sensor_histidine_kinase/response regulator DK885_02940 DK885_02945 576720 576818 + glycosyltransferase no_locus_tag DK885_02950 576775 577472 + IS1-like_element_IS1A_family_transposase no_locus_tag AXL16201 577592 578245 + glutamine_amidotransferase DK885_02955 AXL16202 578242 578970 + monofunctional_biosynthetic_peptidoglycan transglycosylase DK885_02960 AXL16203 578967 579599 - PhoP_regulatory_network_protein_YrbL DK885_02965 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AXL16189 90 682 107.449856734 0.0 PJR32596.1 AXL16187 97 507 100.0 1e-178 PJR32597.1 AXL16186 99 456 100.0 1e-160 PJR32599.1 AXL16184 100 611 100.0 0.0 PJR32600.1 AXL16183 99 536 100.0 0.0 >> 271. CP029240_0 Source: Escherichia coli strain BH214 chromosome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: QBO94124 3299658 3300386 - monofunctional_biosynthetic_peptidoglycan transglycosylase DF193_17210 QBO94125 3300383 3301036 - glutamine_amidotransferase DF193_17215 QBO94126 3301266 3303602 - hybrid_sensor_histidine_kinase/response regulator DF193_17220 QBO95399 3303698 3304627 - TIGR01212_family_radical_SAM_protein DF193_17225 QBO94127 3305019 3305255 - hypothetical_protein DF193_17230 DF193_17235 3305153 3305379 - hypothetical_protein no_locus_tag QBO94128 3305302 3309762 + glutamate_synthase_large_subunit DF193_17240 QBO94129 3309775 3311193 + glutamate_synthase DF193_17245 QBO94130 3311348 3311632 + hypothetical_protein DF193_17250 QBO94131 3311753 3312517 + glutamate_synthase_operon_protein_GltF DF193_17255 QBO94132 3312689 3313363 + fimbrial_chaperone_protein DF193_17260 QBO94133 3313384 3315765 + fimbrial_protein DF193_17265 DF193_17270 3315762 3316130 + hypothetical_protein no_locus_tag QBO94134 3316279 3317295 - IS5-like_element_IS5_family_transposase DF193_17275 QBO94135 3317258 3317506 + hypothetical_protein DF193_17280 DF193_17285 3317503 3317739 + hypothetical_protein no_locus_tag DF193_17290 3317739 3317837 + glycosyltransferase no_locus_tag DF193_17295 3317794 3318491 + IS1_family_transposase no_locus_tag DF193_17300 3318508 3318996 + hypothetical_protein no_locus_tag QBO94136 3319181 3320308 + DUF1016_domain-containing_protein DF193_17305 QBO94137 3320368 3320832 - YhcH/YjgK/YiaL_family_protein DF193_17310 QBO94138 3320829 3321704 - N-acetylmannosamine_kinase DF193_17315 QBO94139 3321701 3322390 - N-acetylmannosamine-6-phosphate_2-epimerase DF193_17320 QBO94140 3322438 3323928 - MFS_transporter DF193_17325 QBO94141 3324037 3324930 - N-acetylneuraminate_lyase nanA QBO94142 3325052 3325843 - transcriptional_regulator_NanR nanR DF193_17340 3326113 3326223 - transposase no_locus_tag QBO94143 3326223 3327590 + C4-dicarboxylate_transporter_DcuC DF193_17345 QBO94144 3327633 3328130 - stringent_starvation_protein_B DF193_17350 QBO94145 3328136 3328774 - stringent_starvation_protein_A DF193_17355 QBO94146 3328716 3328925 + hypothetical_protein DF193_17360 QBO94147 3329169 3329561 - 30S_ribosomal_protein_S9 DF193_17365 QBO94148 3329577 3330005 - 50S_ribosomal_protein_L13 DF193_17370 QBO94149 3330224 3331351 - cell_division_protein_ZapE DF193_17375 QBO94150 3331545 3331943 + DUF1043_domain-containing_protein DF193_17380 QBO94151 3332097 3333464 + periplasmic_pH-dependent_serine_endoprotease DegQ DF193_17385 QBO94152 3333554 3334621 + outer_membrane-stress_sensor_serine endopeptidase DegS DF193_17390 QBO94153 3334684 3335622 - malate_dehydrogenase DF193_17395 QBO94154 3336057 3336527 + arginine_repressor DF193_17400 QBO94155 3336892 3337155 + DUF1471_domain-containing_protein DF193_17405 QBO94156 3337211 3337483 - hypothetical_protein DF193_17410 QBO94157 3337575 3339542 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DF193_17415 QBO94158 3339548 3340480 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DF193_17420 QBO94159 3340488 3340691 - protein_AaeX DF193_17425 QBO94160 3340874 3341803 + HTH-type_transcriptional_activator_AaeR DF193_17430 QBO94161 3341937 3343382 - metalloprotease_TldD DF193_17435 QBO94162 3343812 3347612 - AsmA2_domain-containing_protein DF193_17440 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QBO94136 90 682 107.449856734 0.0 PJR32596.1 QBO94138 97 507 100.0 1e-178 PJR32597.1 QBO94139 99 456 100.0 1e-160 PJR32599.1 QBO94141 100 611 100.0 0.0 PJR32600.1 QBO94142 99 536 100.0 0.0 >> 272. CP029239_0 Source: Escherichia coli strain BH212 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: QBO98833 3396904 3397632 - monofunctional_biosynthetic_peptidoglycan transglycosylase DF195_17855 QBO98834 3397629 3398282 - glutamine_amidotransferase DF195_17860 QBO98835 3398512 3400848 - hybrid_sensor_histidine_kinase/response regulator DF195_17865 QBP00125 3400944 3401873 - TIGR01212_family_radical_SAM_protein DF195_17870 QBO98836 3402265 3402501 - hypothetical_protein DF195_17875 DF195_17880 3402399 3402625 - hypothetical_protein no_locus_tag QBO98837 3402548 3407008 + glutamate_synthase_large_subunit DF195_17885 QBO98838 3407021 3408439 + glutamate_synthase DF195_17890 QBO98839 3408594 3408878 + hypothetical_protein DF195_17895 QBO98840 3408999 3409763 + glutamate_synthase_operon_protein_GltF DF195_17900 QBO98841 3409935 3410609 + fimbrial_chaperone_protein DF195_17905 QBO98842 3410630 3413011 + fimbrial_protein DF195_17910 DF195_17915 3413008 3413376 + hypothetical_protein no_locus_tag QBO98843 3413525 3414541 - IS5-like_element_IS5_family_transposase DF195_17920 QBO98844 3414504 3414752 + hypothetical_protein DF195_17925 DF195_17930 3414749 3414985 + hypothetical_protein no_locus_tag DF195_17935 3414985 3415083 + glycosyltransferase no_locus_tag DF195_17940 3415040 3415737 + IS1-like_element_IS1A_family_transposase no_locus_tag DF195_17945 3415754 3416242 + hypothetical_protein no_locus_tag QBO98845 3416427 3417554 + DUF1016_domain-containing_protein DF195_17950 QBO98846 3417614 3418078 - YhcH/YjgK/YiaL_family_protein DF195_17955 QBO98847 3418075 3418950 - N-acetylmannosamine_kinase DF195_17960 QBO98848 3418947 3419636 - N-acetylmannosamine-6-phosphate_2-epimerase DF195_17965 QBO98849 3419684 3421174 - MFS_transporter DF195_17970 QBO98850 3421283 3422176 - N-acetylneuraminate_lyase nanA QBO98851 3422298 3423089 - transcriptional_regulator_NanR nanR DF195_17985 3423359 3423469 - transposase no_locus_tag QBO98852 3423469 3424836 + C4-dicarboxylate_transporter_DcuC DF195_17990 QBO98853 3424879 3425376 - stringent_starvation_protein_B DF195_17995 QBO98854 3425382 3426020 - stringent_starvation_protein_A DF195_18000 QBO98855 3425962 3426171 + hypothetical_protein DF195_18005 QBO98856 3426415 3426807 - 30S_ribosomal_protein_S9 DF195_18010 QBO98857 3426823 3427251 - 50S_ribosomal_protein_L13 DF195_18015 QBO98858 3427470 3428597 - cell_division_protein_ZapE DF195_18020 QBP00126 3428791 3429189 + DUF1043_domain-containing_protein DF195_18025 QBO98859 3429343 3430710 + periplasmic_pH-dependent_serine_endoprotease DegQ DF195_18030 QBO98860 3430800 3431867 + outer_membrane-stress_sensor_serine endopeptidase DegS DF195_18035 QBO98861 3431930 3432868 - malate_dehydrogenase DF195_18040 QBO98862 3433303 3433773 + arginine_repressor DF195_18045 QBO98863 3434138 3434401 + DUF1471_domain-containing_protein DF195_18050 QBO98864 3434457 3434729 - hypothetical_protein DF195_18055 QBO98865 3434821 3436788 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DF195_18060 QBO98866 3436794 3437726 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DF195_18065 QBO98867 3437734 3437937 - protein_AaeX DF195_18070 QBO98868 3438120 3439049 + HTH-type_transcriptional_activator_AaeR DF195_18075 QBO98869 3439183 3440628 - metalloprotease_TldD DF195_18080 QBO98870 3441058 3444858 - AsmA2_domain-containing_protein DF195_18085 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QBO98845 90 682 107.449856734 0.0 PJR32596.1 QBO98847 97 507 100.0 1e-178 PJR32597.1 QBO98848 99 456 100.0 1e-160 PJR32599.1 QBO98850 100 611 100.0 0.0 PJR32600.1 QBO98851 99 536 100.0 0.0 >> 273. CP029238_0 Source: Escherichia coli strain CJ236 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: QBP03301 3347966 3348238 + phosphocarrier_protein_NPr DF192_17420 QBP03302 3348452 3349084 + protein_YrbL yrbL QBP03303 3349081 3349809 - monofunctional_biosynthetic_peptidoglycan transglycosylase DF192_17430 QBP03304 3349806 3350459 - glutamine_amidotransferase DF192_17435 QBP03305 3350689 3353025 - hybrid_sensor_histidine_kinase/response regulator DF192_17440 QBP04600 3353121 3354050 - TIGR01212_family_radical_SAM_protein DF192_17445 QBP03306 3354442 3354678 - hypothetical_protein DF192_17450 DF192_17455 3354576 3354802 - hypothetical_protein no_locus_tag QBP03307 3354725 3359185 + glutamate_synthase_large_subunit DF192_17460 QBP03308 3359198 3360616 + glutamate_synthase DF192_17465 QBP03309 3360771 3361055 + hypothetical_protein DF192_17470 QBP03310 3361176 3361940 + glutamate_synthase_operon_protein_GltF DF192_17475 QBP03311 3362112 3362786 + fimbrial_chaperone_protein DF192_17480 QBP03312 3362807 3365188 + fimbrial_protein DF192_17485 DF192_17490 3365185 3365553 + hypothetical_protein no_locus_tag QBP03313 3365702 3366718 - IS5-like_element_IS5_family_transposase DF192_17495 QBP03314 3366681 3366929 + hypothetical_protein DF192_17500 QBP03315 3366926 3367642 + DUF1120_domain-containing_protein DF192_17505 QBP03316 3367827 3368954 + DUF1016_domain-containing_protein DF192_17510 QBP03317 3369014 3369478 - YhcH/YjgK/YiaL_family_protein DF192_17515 QBP03318 3369475 3370350 - N-acetylmannosamine_kinase DF192_17520 QBP03319 3370347 3371036 - N-acetylmannosamine-6-phosphate_2-epimerase DF192_17525 QBP03320 3371084 3372574 - MFS_transporter DF192_17530 QBP03321 3372683 3373576 - N-acetylneuraminate_lyase nanA QBP03322 3373698 3374489 - transcriptional_regulator_NanR nanR DF192_17545 3374759 3374869 - transposase no_locus_tag QBP03323 3374869 3376236 + C4-dicarboxylate_transporter_DcuC DF192_17550 QBP03324 3376279 3376776 - stringent_starvation_protein_B DF192_17555 QBP03325 3376782 3377420 - stringent_starvation_protein_A DF192_17560 QBP03326 3377362 3377571 + hypothetical_protein DF192_17565 QBP03327 3377815 3378207 - 30S_ribosomal_protein_S9 DF192_17570 QBP03328 3378223 3378651 - 50S_ribosomal_protein_L13 DF192_17575 QBP03329 3378870 3379997 - cell_division_protein_ZapE DF192_17580 QBP03330 3380191 3380589 + DUF1043_domain-containing_protein DF192_17585 QBP03331 3380743 3382110 + periplasmic_pH-dependent_serine_endoprotease DegQ DF192_17590 QBP03332 3382200 3383267 + outer_membrane-stress_sensor_serine endopeptidase DegS DF192_17595 QBP03333 3383330 3384268 - malate_dehydrogenase DF192_17600 QBP03334 3384703 3385173 + arginine_repressor DF192_17605 QBP03335 3385538 3385801 + DUF1471_domain-containing_protein DF192_17610 QBP03336 3385857 3386129 - hypothetical_protein DF192_17615 QBP03337 3386221 3388188 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DF192_17620 QBP03338 3388194 3389126 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DF192_17625 QBP03339 3389134 3389337 - protein_AaeX DF192_17630 QBP03340 3389520 3390449 + HTH-type_transcriptional_activator_AaeR DF192_17635 QBP03341 3390583 3392028 - metalloprotease_TldD DF192_17640 QBP03342 3392458 3396258 - AsmA2_domain-containing_protein DF192_17645 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QBP03316 90 682 107.449856734 0.0 PJR32596.1 QBP03318 97 507 100.0 1e-178 PJR32597.1 QBP03319 99 456 100.0 1e-160 PJR32599.1 QBP03321 100 611 100.0 0.0 PJR32600.1 QBP03322 99 536 100.0 0.0 >> 274. CP028704_0 Source: Escherichia coli strain VH1 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: AWM68067 450231 450959 - monofunctional_biosynthetic_peptidoglycan transglycosylase DBK97_02360 AWM68068 450956 451609 - glutamine_amidotransferase DBK97_02365 DBK97_02370 451729 452426 - IS1-like_element_IS1A_family_transposase no_locus_tag DBK97_02375 452383 452481 - glycosyltransferase no_locus_tag AWM68069 452615 454951 - hybrid_sensor_histidine_kinase/response regulator DBK97_02380 AWM71736 455047 455976 - TIGR01212_family_radical_SAM_protein DBK97_02385 AWM68070 456368 456604 - hypothetical_protein DBK97_02390 DBK97_02395 456502 456728 - hypothetical_protein no_locus_tag AWM68071 456651 461111 + glutamate_synthase_large_subunit DBK97_02400 AWM68072 461124 462542 + glutamate_synthase DBK97_02405 AWM68073 462697 462981 + hypothetical_protein DBK97_02410 AWM68074 463102 463866 + glutamate_synthase_operon_protein_GltF DBK97_02415 AWM68075 464038 464712 + fimbrial_chaperone_protein DBK97_02420 AWM68076 464733 467114 + fimbrial_protein DBK97_02425 DBK97_02430 467111 467479 + hypothetical_protein no_locus_tag AWM68077 467628 468644 - IS5-like_element_IS5_family_transposase DBK97_02435 AWM68078 468607 468855 + hypothetical_protein DBK97_02440 AWM68079 468852 469568 + DUF1120_domain-containing_protein DBK97_02445 AWM68080 469753 470880 + DUF1016_domain-containing_protein DBK97_02450 AWM68081 470940 471404 - YhcH/YjgK/YiaL_family_protein DBK97_02455 AWM68082 471401 472276 - N-acetylmannosamine_kinase DBK97_02460 AWM68083 472273 472962 - N-acetylmannosamine-6-phosphate_2-epimerase DBK97_02465 AWM68084 473010 474500 - MFS_transporter DBK97_02470 AWM68085 474609 475502 - N-acetylneuraminate_lyase nanA AWM68086 475624 476415 - transcriptional_regulator_NanR nanR DBK97_02485 476685 476795 - transposase no_locus_tag AWM68087 476795 478162 + C4-dicarboxylate_transporter DBK97_02490 AWM68088 478205 478702 - stringent_starvation_protein_B DBK97_02495 AWM68089 478708 479346 - stringent_starvation_protein_A DBK97_02500 AWM68090 479288 479497 + hypothetical_protein DBK97_02505 AWM68091 479741 480133 - 30S_ribosomal_protein_S9 DBK97_02510 AWM68092 480149 480577 - 50S_ribosomal_protein_L13 DBK97_02515 AWM68093 480796 481923 - cell_division_protein_ZapE DBK97_02520 AWM68094 482117 482515 + DUF1043_domain-containing_protein DBK97_02525 AWM68095 482669 484036 + periplasmic_pH-dependent_serine_endoprotease DegQ DBK97_02530 AWM68096 484126 485193 + outer_membrane-stress_sensor_serine endopeptidase DegS DBK97_02535 AWM68097 485256 486194 - malate_dehydrogenase DBK97_02540 AWM68098 486629 487099 + arginine_repressor DBK97_02545 AWM68099 487464 487727 + DUF1471_domain-containing_protein DBK97_02550 AWM68100 487783 488055 - hypothetical_protein DBK97_02555 DBK97_02560 488147 490113 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB no_locus_tag AWM68101 490119 491051 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DBK97_02565 AWM68102 491059 491262 - protein_AaeX DBK97_02570 AWM68103 491445 492374 + HTH-type_transcriptional_activator_AaeR DBK97_02575 AWM68104 492508 493953 - metalloprotease_TldD DBK97_02580 AWM68105 494474 498274 - AsmA2_domain-containing_protein DBK97_02585 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AWM68080 90 682 107.449856734 0.0 PJR32596.1 AWM68082 97 507 100.0 1e-178 PJR32597.1 AWM68083 99 456 100.0 1e-160 PJR32599.1 AWM68085 100 611 100.0 0.0 PJR32600.1 AWM68086 99 536 100.0 0.0 >> 275. CP028702_0 Source: Escherichia coli strain J53 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: AVZ50751 3782852 3783124 + phosphocarrier_protein_NPr DBB46_19695 AVZ50752 3783338 3783970 + protein_YrbL yrbL AVZ50753 3783967 3784695 - monofunctional_biosynthetic_peptidoglycan transglycosylase DBB46_19705 AVZ50754 3784692 3785345 - glutamine_amidotransferase DBB46_19710 AVZ50755 3785575 3787911 - hybrid_sensor_histidine_kinase/response regulator DBB46_19715 AVZ51716 3788007 3788936 - TIGR01212_family_radical_SAM_protein DBB46_19720 AVZ50756 3789328 3789564 - hypothetical_protein DBB46_19725 DBB46_19730 3789462 3789688 - hypothetical_protein no_locus_tag AVZ50757 3789611 3794071 + glutamate_synthase_large_subunit DBB46_19735 AVZ50758 3794084 3795502 + glutamate_synthase DBB46_19740 AVZ50759 3795657 3795941 + hypothetical_protein DBB46_19745 AVZ50760 3796062 3796826 + glutamate_synthase_operon_protein_GltF DBB46_19750 AVZ50761 3796998 3797672 + fimbrial_chaperone_protein DBB46_19755 AVZ50762 3797693 3800074 + fimbrial_protein DBB46_19760 DBB46_19765 3800071 3800439 + hypothetical_protein no_locus_tag AVZ50763 3800588 3801604 - IS5-like_element_IS5_family_transposase DBB46_19770 AVZ50764 3801567 3801815 + hypothetical_protein DBB46_19775 AVZ50765 3801812 3802528 + DUF1120_domain-containing_protein DBB46_19780 AVZ50766 3802713 3803840 + DUF1016_domain-containing_protein DBB46_19785 AVZ50767 3803900 3804364 - YhcH/YjgK/YiaL_family_protein DBB46_19790 AVZ50768 3804361 3805236 - N-acetylmannosamine_kinase DBB46_19795 AVZ50769 3805233 3805922 - N-acetylmannosamine-6-phosphate_2-epimerase DBB46_19800 AVZ50770 3805970 3807460 - MFS_transporter DBB46_19805 AVZ50771 3807569 3808462 - N-acetylneuraminate_lyase nanA AVZ50772 3808584 3809375 - transcriptional_regulator_NanR nanR DBB46_19820 3809645 3809755 - transposase no_locus_tag AVZ50773 3809755 3811122 + C4-dicarboxylate_transporter DBB46_19825 AVZ50774 3811165 3811662 - stringent_starvation_protein_B DBB46_19830 AVZ50775 3811668 3812306 - stringent_starvation_protein_A DBB46_19835 AVZ50776 3812248 3812457 + hypothetical_protein DBB46_19840 AVZ50777 3812701 3813093 - 30S_ribosomal_protein_S9 DBB46_19845 AVZ50778 3813109 3813537 - 50S_ribosomal_protein_L13 DBB46_19850 AVZ50779 3813756 3814883 - cell_division_protein_ZapE DBB46_19855 AVZ51717 3815077 3815475 + DUF1043_domain-containing_protein DBB46_19860 AVZ50780 3815629 3816996 + periplasmic_pH-dependent_serine_endoprotease DegQ DBB46_19865 AVZ50781 3817086 3818153 + outer_membrane-stress_sensor_serine endopeptidase DegS DBB46_19870 AVZ50782 3818216 3819154 - malate_dehydrogenase DBB46_19875 AVZ50783 3819589 3820059 + arginine_repressor DBB46_19880 AVZ50784 3820424 3820687 + DUF1471_domain-containing_protein DBB46_19885 AVZ50785 3820743 3821015 - hypothetical_protein DBB46_19890 AVZ50786 3821107 3823074 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DBB46_19895 AVZ50787 3823080 3824012 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DBB46_19900 AVZ50788 3824020 3824223 - protein_AaeX DBB46_19905 AVZ50789 3824406 3825335 + HTH-type_transcriptional_activator_AaeR DBB46_19910 AVZ50790 3825469 3826914 - metalloprotease_TldD DBB46_19915 AVZ50791 3827344 3831144 - AsmA2_domain-containing_protein DBB46_19920 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AVZ50766 90 682 107.449856734 0.0 PJR32596.1 AVZ50768 97 507 100.0 1e-178 PJR32597.1 AVZ50769 99 456 100.0 1e-160 PJR32599.1 AVZ50771 100 611 100.0 0.0 PJR32600.1 AVZ50772 99 536 100.0 0.0 >> 276. CP018801_0 Source: Escherichia coli strain tolC- chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: APQ19886 491710 493155 + protease_TldD BTD92_00480 APQ19887 493289 494218 - D-malate_degradation_protein_R dmlR_2 APQ19888 494401 494604 + efflux_system_membrane_protein BTD92_00482 APQ19889 494612 495544 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA_1 APQ19890 495550 497517 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB_1 APQ19891 497609 497881 + Barstar_(barnase_inhibitor) BTD92_00485 APQ19892 497937 498200 - Copper-induced_outer_membrane_component bhsA_1 APQ19893 498565 499035 - Arginine_repressor argR APQ19894 499470 500408 + Malate_dehydrogenase mdh APQ19895 500471 501538 - Serine_endoprotease_DegS_precursor degS APQ19896 501628 502995 - Periplasmic_pH-dependent_serine_endoprotease DegQ precursor degQ APQ19897 503149 503547 - Putative_cytochrome_d_ubiquinol_oxidase_subunit 3 yhcB APQ19898 503741 504868 + AFG1-like_ATPase BTD92_00492 APQ19899 505087 505515 + 50S_ribosomal_protein_L13 rplM APQ19900 505531 505923 + 30S_ribosomal_protein_S9 rpsI APQ19901 506318 506956 + Stringent_starvation_protein_A sspA APQ19902 506962 507459 + Stringent_starvation_protein_B sspB APQ19903 507502 508869 - Putative_cryptic_C4-dicarboxylate_transporter DcuD dcuD_1 APQ19904 509249 510040 + L-lactate_utilization_operon_repressor lutR_2 APQ19905 510162 511055 + N-acetylneuraminate_lyase nanA APQ19906 511164 512654 + Sialic_acid_permease nanT_1 APQ19907 512702 513391 + Putative_N-acetylmannosamine-6-phosphate 2-epimerase nanE APQ19908 513388 514263 + N-acetylmannosamine_kinase nanK APQ19909 514260 514724 + Toxin-antitoxin_biofilm_protein_TabA tabA_2 APQ19910 514784 515911 - hypothetical_protein BTD92_00504 APQ19911 516096 516812 - hypothetical_protein BTD92_00505 APQ19912 516809 517054 - hypothetical_protein BTD92_00506 APQ19913 517056 518036 + Transposase_DDE_domain_protein BTD92_00507 APQ19914 518074 518553 - hypothetical_protein BTD92_00508 APQ19915 518550 520931 - F1_capsule-anchoring_protein_precursor caf1A APQ19916 520952 521626 - putative_fimbrial_chaperone_protein BTD92_00510 APQ19917 521798 522562 - hypothetical_protein BTD92_00511 APQ19918 523122 524540 - Glutamate_synthase_[NADPH]_small_chain gltD_1 APQ19919 524553 529106 - Glutamate_synthase_[NADPH]_large_chain precursor gltB APQ19920 529688 530617 + coproporphyrinogen_III_oxidase BTD92_00514 APQ19921 530713 533049 + Aerobic_respiration_control_sensor_protein_ArcB arcB APQ19922 533279 533932 + Sigma_cross-reacting_protein_27A elbB APQ19923 533929 534657 + Penicillin-binding_protein_2D pbpG_1 APQ19924 534654 535286 - PhoP_regulatory_network_protein_YrbL BTD92_00519 APQ19925 535500 535772 - Phosphocarrier_protein_NPr ptsO APQ19926 535769 536623 - glmZ(sRNA)-inactivating_NTPase BTD92_00521 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APQ19910 90 682 107.449856734 0.0 PJR32596.1 APQ19908 97 507 100.0 1e-178 PJR32597.1 APQ19907 99 456 100.0 1e-160 PJR32599.1 APQ19905 100 611 100.0 0.0 PJR32600.1 APQ19904 99 536 100.0 0.0 >> 277. CP017979_0 Source: Escherichia coli str. K-12 substr. W3110 substrain ZK126 genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: APC53365 3239965 3240237 + phosphohistidinoprotein-hexose phosphotransferase BL257_16125 APC53366 3240451 3241083 + hypothetical_protein BL257_16130 APC53367 3241080 3241808 - monofunctional_biosynthetic_peptidoglycan transglycosylase BL257_16135 APC53368 3241805 3242458 - isoprenoid_biosynthesis_protein_ElbB BL257_16140 APC53369 3242688 3245024 - aerobic_respiration_two-component_sensor histidine kinase ArcB BL257_16145 APC54653 3245120 3246049 - TIGR01212_family_radical_SAM_protein BL257_16150 APC54654 3246724 3251184 + glutamate_synthase_large_subunit BL257_16155 APC53370 3251197 3252615 + glutamate_synthase BL257_16160 APC53371 3253175 3253939 + glutamate_synthase_operon_protein_GltF BL257_16165 APC53372 3254111 3254785 + fimbrial_chaperone_protein BL257_16170 APC53373 3254806 3257187 + fimbrial_protein BL257_16175 BL257_16180 3257184 3257552 + hypothetical_protein no_locus_tag APC53374 3257701 3258681 - IS5_family_transposase BL257_16185 APC53375 3258680 3258928 + hypothetical_protein BL257_16190 APC53376 3258925 3259641 + hypothetical_protein BL257_16195 APC53377 3259826 3260953 + hypothetical_protein BL257_16200 APC53378 3261013 3261477 - hypothetical_protein BL257_16205 APC53379 3261474 3262349 - N-acetylmannosamine_kinase BL257_16210 APC53380 3262346 3263035 - N-acetylmannosamine-6-phosphate_2-epimerase BL257_16215 APC53381 3263083 3264573 - MFS_transporter BL257_16220 APC53382 3264682 3265575 - N-acetylneuraminate_lyase BL257_16225 APC53383 3265697 3266488 - transcriptional_regulator_NanR BL257_16230 APC53384 3266868 3268235 + C4-dicarboxylate_transporter BL257_16235 APC53385 3268278 3268775 - ClpXP_protease_specificity-enhancing_factor BL257_16240 APC53386 3268781 3269419 - stringent_starvation_protein_A sspA APC53387 3269814 3270206 - 30S_ribosomal_protein_S9 BL257_16250 APC53388 3270222 3270650 - 50S_ribosomal_protein_L13 BL257_16255 APC53389 3270869 3271996 - cell_division_protein_ZapE BL257_16260 APC53390 3272190 3272588 + hypothetical_protein BL257_16265 APC53391 3272742 3274109 + serine_endoprotease_DegQ BL257_16270 APC53392 3274199 3275266 + outer_membrane-stress_sensor_serine endopeptidase DegS BL257_16275 APC53393 3275329 3276267 - malate_dehydrogenase BL257_16280 APC53394 3276702 3277172 + arginine_repressor BL257_16285 APC53395 3277537 3277800 + hypothetical_protein BL257_16290 APC53396 3277856 3278128 - hypothetical_protein BL257_16295 APC53397 3278220 3280187 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BL257_16300 APC53398 3280193 3281125 - efflux_transporter_periplasmic_adaptor_subunit BL257_16305 APC54655 3281133 3281336 - transporter BL257_16310 APC53399 3281519 3282448 + transcriptional_regulator BL257_16315 APC53400 3282582 3284027 - metalloprotease_TldD BL257_16320 APC53401 3284457 3288257 - TIGR02099_family_protein BL257_16325 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APC53377 90 682 107.449856734 0.0 PJR32596.1 APC53379 97 507 100.0 1e-178 PJR32597.1 APC53380 99 456 100.0 1e-160 PJR32599.1 APC53382 100 611 100.0 0.0 PJR32600.1 APC53383 99 536 100.0 0.0 >> 278. CP014225_0 Source: Escherichia coli str. K-12 substr. MG1655, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: AMC96101 1545166 1545438 + phosphohistidinoprotein-hexose phosphotransferase AW869_07640 AMC96102 1545652 1546284 + hypothetical_protein AW869_07645 AMC96103 1546281 1547009 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AMC96104 1547006 1547659 - isoprenoid_biosynthesis_protein AW869_07655 AMC96105 1547889 1550225 - aerobic_respiration_two-component_sensor histidine kinase ArcB AW869_07660 AMC98995 1550321 1551250 - radical_SAM_protein AW869_07665 AMC98996 1551925 1556385 + glutamate_synthase_large_subunit gltB AMC96106 1556398 1557816 + glutamate_synthase AW869_07675 AMC96107 1558376 1559140 + glutamate_synthase_operon_protein_GltF AW869_07680 AMC96108 1559312 1559986 + fimbrial_chaperone_protein AW869_07685 AMC96109 1560007 1562388 + fimbrial_protein AW869_07690 AW869_07695 1562385 1562753 + hypothetical_protein no_locus_tag AMC96110 1562902 1563882 - transposase AW869_07700 AMC96111 1563881 1564129 + hypothetical_protein AW869_07705 AMC96112 1564126 1564842 + hypothetical_protein AW869_07710 AMC96113 1565027 1566154 + hypothetical_protein AW869_07715 AMC96114 1566214 1566678 - hypothetical_protein AW869_07720 AMC96115 1566675 1567550 - N-acetylmannosamine_kinase AW869_07725 AMC96116 1567547 1568236 - N-acetylmannosamine-6-phosphate_2-epimerase AW869_07730 AMC96117 1568284 1569774 - sialic_acid_transporter AW869_07735 AMC96118 1569883 1570776 - N-acetylneuraminate_lyase AW869_07740 AMC96119 1570898 1571689 - transcriptional_regulator_NanR AW869_07745 AMC96120 1572069 1573436 + C4-dicarboxylate_transporter AW869_07750 AMC96121 1573479 1573976 - stringent_starvation_protein_B AW869_07755 AMC96122 1573982 1574620 - stringent_starvation_protein_A sspA AMC96123 1575015 1575407 - 30S_ribosomal_protein_S9 AW869_07765 AMC96124 1575423 1575851 - 50S_ribosomal_protein_L13 AW869_07770 AMC96125 1576070 1577197 - hypothetical_protein AW869_07775 AMC96126 1577391 1577789 + hypothetical_protein AW869_07780 AMC96127 1577943 1579310 + serine_endoprotease_DegQ AW869_07785 AMC96128 1579400 1580467 + outer_membrane-stress_sensor_serine endopeptidase DegS AW869_07790 AMC96129 1580530 1581468 - malate_dehydrogenase AW869_07795 AMC96130 1581903 1582373 + arginine_repressor AW869_07800 AMC96131 1582738 1583001 + hypothetical_protein AW869_07805 AMC96132 1583057 1583329 - hypothetical_protein AW869_07810 AMC96133 1583421 1585388 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB AW869_07815 AMC96134 1585394 1586326 - efflux_transporter_periplasmic_adaptor_subunit AW869_07820 AMC98997 1586334 1586537 - transporter AW869_07825 AMC96135 1586720 1587649 + transcriptional_regulator AW869_07830 AMC96136 1587783 1589228 - metalloprotease_TldD tldD AMC96137 1589658 1593458 - hypothetical_protein AW869_07840 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AMC96113 90 682 107.449856734 0.0 PJR32596.1 AMC96115 97 507 100.0 1e-178 PJR32597.1 AMC96116 99 456 100.0 1e-160 PJR32599.1 AMC96118 100 611 100.0 0.0 PJR32600.1 AMC96119 99 536 100.0 0.0 >> 279. CP013253_0 Source: Escherichia coli strain CQSW20, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: ALQ71166 31542 32987 + protease_TldD tldD ALQ71167 33121 34050 - transcriptional_regulator ATL78_00170 ALQ75101 34233 34436 + transporter ATL78_00175 ALQ71168 34444 35376 + p-hydroxybenzoic_acid_efflux_subunit_AaeA ATL78_00180 ALQ71169 35382 37349 + p-hydroxybenzoic_acid_efflux_subunit_AaeB ATL78_00185 ALQ71170 37441 37713 + hypothetical_protein ATL78_00190 ALQ71171 37769 38032 - hypothetical_protein ATL78_00195 ALQ71172 38397 38867 - arginine_repressor ATL78_00200 ALQ71173 39302 40240 + malate_dehydrogenase ATL78_00205 ALQ71174 40303 41370 - serine_endoprotease ATL78_00210 ALQ71175 41460 42827 - serine_endoprotease_DegQ ATL78_00215 ALQ71176 42981 43379 - hypothetical_protein ATL78_00220 ALQ71177 43573 44700 + hypothetical_protein ATL78_00225 ALQ71178 44919 45347 + 50S_ribosomal_protein_L13 ATL78_00230 ALQ71179 45363 45755 + 30S_ribosomal_protein_S9 ATL78_00235 ALQ71180 46150 46788 + stringent_starvation_protein_A sspA ALQ71181 46794 47291 + stringent_starvation_protein_B ATL78_00245 ALQ71182 47334 48701 - C4-dicarboxylate_transporter ATL78_00250 ALQ71183 49081 49872 + transcriptional_regulator_NanR ATL78_00255 ALQ71184 49994 50887 + N-acetylneuraminate_lyase ATL78_00260 ALQ71185 50996 52486 + sialic_acid_transporter ATL78_00265 ALQ71186 52534 53223 + N-acetylmannosamine-6-phosphate_2-epimerase ATL78_00270 ALQ71187 53220 54095 + N-acetylmannosamine_kinase ATL78_00275 ALQ71188 54092 54556 + hypothetical_protein ATL78_00280 ALQ71189 54616 55743 - hypothetical_protein ATL78_00285 ALQ71190 55928 56644 - hypothetical_protein ATL78_00290 ALQ71191 56641 56889 - hypothetical_protein ATL78_00295 ALQ71192 56888 57868 + transposase ATL78_00300 ATL78_00305 58017 58385 - hypothetical_protein no_locus_tag ALQ71193 58382 60763 - fimbrial_protein ATL78_00310 ALQ71194 60784 61458 - fimbrial_chaperone_protein ATL78_00315 ALQ71195 61630 62394 - glutamate_synthase_operon_protein_GltF ATL78_00320 ALQ71196 62954 64372 - glutamate_synthase ATL78_00325 ALQ75102 64385 68845 - glutamate_synthase_subunit_alpha gltB ALQ75103 69520 70449 + radical_SAM_protein ATL78_00335 ALQ71197 70545 72881 + hybrid_sensor_histidine_kinase/response regulator ATL78_00340 ALQ71198 73111 73764 + isoprenoid_biosynthesis_protein ATL78_00345 ALQ71199 73761 74489 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA ALQ71200 74486 75118 - hypothetical_protein ATL78_00355 ALQ71201 75332 75604 - phosphohistidinoprotein-hexose phosphotransferase ATL78_00360 ALQ71202 75601 76455 - glmZ(sRNA)-inactivating_NTPase ATL78_00365 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ALQ71189 90 682 107.449856734 0.0 PJR32596.1 ALQ71187 97 507 100.0 1e-178 PJR32597.1 ALQ71186 99 456 100.0 1e-160 PJR32599.1 ALQ71184 100 611 100.0 0.0 PJR32600.1 ALQ71183 99 536 100.0 0.0 >> 280. CP011343_0 Source: Escherichia coli K-12 GM4792 Lac-, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: AKK18970 3324039 3324767 - biosynthetic_peptidoglycan_transglycosylase protein mtgA AKK18971 3324764 3325417 - isoprenoid_biosynthesis_protein withamidotransferase-like domain protein elbB AKK18972 3326423 3328759 - aerobic_respiration_control_sensor arcB AKK18973 3328855 3329784 - putative_Fe-S_oxidoreductase,_Radical SAMsuperfamily protein yhcC AKK18974 3330366 3334919 + glutamate_synthase,_large_subunit_protein gltB AKK18976 3336910 3337674 + periplasmic_protein gltF AKK18977 3337846 3338520 + putative_periplasmic_chaperone_protein yhcA AKK15750 3338541 3340922 + putative_outer_membrane_fimbrial_subunit usherprotein yhcD AKK18978 3342660 3343376 + putative_transcriptional_regulator_protein yhcF ALJ96321 3343561 3344688 + DUF1016_family_protein_in_the_PD-(D/E)XKnuclease superfamily protein yhcG ALJ96322 3344748 3345212 - DUF386_family_protein,_cupin_superfamily protein yhcH AKK18979 3345209 3346084 - N-acetylmannosamine_kinase_protein nanK AKK18980 3346081 3346770 - putative_N-acetylmannosamine-6-P_epimerase protein nanE AKK18981 3346818 3348308 - sialic_acid_transporter_protein nanT AKK18982 3348417 3349310 - N-acetylneuraminate_lyase_protein nanA AKK18983 3349432 3350223 - transcriptional_repressor_of_the_nan operon,induced by sialic acid protein nanR AKK18984 3350603 3351970 + putative_transporter_protein dcuD AKK18985 3352013 3352510 - ClpXP_protease_specificity_enhancing_factor protein sspB AKK18986 3352516 3353154 - stringent_starvation_protein sspA AKK18987 3353549 3353941 - 30S_ribosomal_subunit_protein_S9_protein rpsI AKK18988 3353957 3354385 - 50S_ribosomal_subunit_protein_L13_protein rplM ALJ96323 3354604 3355731 - putative_AFG1-like_family_P-loop_ATPase_protein yhcM ALJ96324 3355925 3356323 + DUF1043_family_inner_membrane-anchored_protein yhcB AKK18989 3356477 3357844 + serine_endoprotease,_periplasmic_protein degQ AKK18990 3357934 3359001 + serine_endoprotease,_periplasmic_protein degS AKK18991 3359064 3360002 - malate_dehydrogenase,_NAD(P)-binding_protein mdh AKK18992 3360437 3360907 + l-arginine-responsive_arginine_metabolismregulon transcriptional regulator protein argR ALJ96325 3361272 3361535 + cadmium_and_peroxide_resistance protein,stress-induced protein yhcN AKK18993 3361591 3361863 - putative_barnase_inhibitor_protein yhcO AKK18994 3361955 3363922 - p-hydroxybenzoic_acid_efflux_system_component protein aaeB AKK18995 3363928 3364860 - p-hydroxybenzoic_acid_efflux_system_component protein aaeA AKK18996 3364868 3365071 - DUF1656_family_putative_inner_membrane effluxpump associated protein aaeX AKK18997 3365254 3366183 + transcriptional_regulator_for_aaeXAB_operon protein aaeR AKK18998 3366317 3367762 - putative_peptidase_protein tldD AKK18999 3368192 3371992 - DUF3971-AsmA2_domains_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ALJ96321 90 682 107.449856734 0.0 PJR32596.1 AKK18979 97 507 100.0 1e-178 PJR32597.1 AKK18980 99 456 100.0 1e-160 PJR32599.1 AKK18982 100 611 100.0 0.0 PJR32600.1 AKK18983 99 536 100.0 0.0 >> 281. CP011342_0 Source: Escherichia coli K-12 GM4792 Lac+, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: AKK14974 3324784 3325512 - biosynthetic_peptidoglycan_transglycosylase protein mtgA AKK14973 3325509 3326162 - isoprenoid_biosynthesis_protein withamidotransferase-like domain protein elbB AKK14972 3327168 3329504 - aerobic_respiration_control_sensor arcB AKK14971 3329600 3330529 - putative_Fe-S_oxidoreductase,_Radical SAMsuperfamily protein yhcC AKK14970 3331111 3335664 + glutamate_synthase,_large_subunit_protein gltB AKK14968 3337655 3338419 + periplasmic_protein gltF AKK14967 3338591 3339265 + putative_periplasmic_chaperone_protein yhcA AKK14642 3339286 3341667 + putative_outer_membrane_fimbrial_subunit usherprotein yhcD AKK14966 3343405 3344121 + putative_transcriptional_regulator_protein yhcF ALJ95744 3344306 3345433 + DUF1016_family_protein_in_the_PD-(D/E)XKnuclease superfamily protein yhcG ALJ95745 3345493 3345957 - DUF386_family_protein,_cupin_superfamily protein yhcH AKK14965 3345954 3346829 - N-acetylmannosamine_kinase_protein nanK AKK14964 3346826 3347515 - putative_N-acetylmannosamine-6-P_epimerase protein nanE AKK14963 3347563 3349053 - sialic_acid_transporter_protein nanT AKK14962 3349162 3350055 - N-acetylneuraminate_lyase_protein nanA AKK14961 3350177 3350968 - transcriptional_repressor_of_the_nan operon,induced by sialic acid protein nanR AKK14960 3351348 3352715 + putative_transporter_protein dcuD AKK14959 3352758 3353255 - ClpXP_protease_specificity_enhancing_factor protein sspB AKK14958 3353261 3353899 - stringent_starvation_protein sspA AKK14957 3354294 3354686 - 30S_ribosomal_subunit_protein_S9_protein rpsI AKK14956 3354702 3355130 - 50S_ribosomal_subunit_protein_L13_protein rplM ALJ95746 3355349 3356476 - putative_AFG1-like_family_P-loop_ATPase_protein yhcM ALJ95747 3356670 3357068 + DUF1043_family_inner_membrane-anchored_protein yhcB AKK14955 3357222 3358589 + serine_endoprotease,_periplasmic_protein degQ AKK14954 3358679 3359746 + serine_endoprotease,_periplasmic_protein degS AKK14953 3359809 3360747 - malate_dehydrogenase,_NAD(P)-binding_protein mdh AKK14952 3361182 3361652 + l-arginine-responsive_arginine_metabolismregulon transcriptional regulator protein argR ALJ95748 3362017 3362280 + cadmium_and_peroxide_resistance protein,stress-induced protein yhcN AKK14951 3362336 3362608 - putative_barnase_inhibitor_protein yhcO AKK14950 3362700 3364667 - p-hydroxybenzoic_acid_efflux_system_component protein aaeB AKK14949 3364673 3365605 - p-hydroxybenzoic_acid_efflux_system_component protein aaeA AKK14948 3365613 3365816 - DUF1656_family_putative_inner_membrane effluxpump associated protein aaeX AKK14947 3365999 3366928 + transcriptional_regulator_for_aaeXAB_operon protein aaeR AKK14946 3367062 3368507 - putative_peptidase_protein tldD AKK14945 3368846 3372646 - conserved_membrane_protein,_putative_transporter protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ALJ95744 90 682 107.449856734 0.0 PJR32596.1 AKK14965 97 507 100.0 1e-178 PJR32597.1 AKK14964 99 456 100.0 1e-160 PJR32599.1 AKK14962 100 611 100.0 0.0 PJR32600.1 AKK14961 99 536 100.0 0.0 >> 282. CP011324_0 Source: Escherichia coli strain SQ2203, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: AKF73536 3334060 3334332 + phosphohistidinoprotein-hexose npr AKF73537 3334546 3335178 + Mg(2+)-starvation-stimulated_protein yrbL AKF73538 3335175 3335903 - biosynthetic_peptidoglycan_transglycosylase mtgA AKF73539 3335900 3336553 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB AKF73540 3336783 3339119 - aerobic_respiration_control_sensor_histidine arcB AKF73541 3339215 3340144 - putative_Fe-S_oxidoreductase,_Radical_SAM superfamily protein yhcC AKF73542 3340819 3345279 + glutamate_synthase,_large_subunit gltB AKF73543 3345292 3346710 + glutamate_synthase,_4Fe-4S_protein,_small subunit gltD AKF73544 3347270 3348034 + periplasmic_protein gltF AKF73545 3348206 3348880 + putative_periplasmic_chaperone_protein yhcA AKF73546 3348901 3351282 + putative_outer_membrane_fimbrial_subunit_usher protein yhcD AKF73547 3351796 3352812 - IS5_transposase_and_trans-activator insH1 AKF73548 3353020 3353736 + putative_transcriptional_regulator yhcF AKF73549 3353921 3355048 + DUF1016_family_protein_in_the_PD-(D/E)XK nuclease superfamily yhcG AKF73550 3355108 3355572 - DUF386_family_protein,_cupin_superfamily yhcH AKF73551 3355569 3356444 - N-acetylmannosamine_kinase nanK AKF73552 3356441 3357130 - putative_N-acetylmannosamine-6-P_epimerase nanE AKF73553 3357178 3358668 - sialic_acid_transporter nanT AKF73554 3358777 3359670 - N-acetylneuraminate_lyase nanA AKF73555 3359792 3360583 - sialic_acid-inducible_nan_operon_repressor nanR AKF73556 3360963 3362330 + putative_transporter dcuD AKF73557 3362373 3362870 - ClpXP_protease_specificity_enhancing_factor sspB AKF73558 3362876 3363514 - stringent_starvation_protein_A,_phage_P1_late sspA AKF73559 3363909 3364301 - 30S_ribosomal_subunit_protein_S9 rpsI AKF73560 3364317 3364745 - 50S_ribosomal_subunit_protein_L13 rplM AKF73561 3364964 3366091 - divisome_ATPase zapE AKF73562 3366285 3366683 + DUF1043_family_inner_membrane-anchored_protein yhcB AKF73563 3366837 3368204 + serine_endoprotease,_periplasmic degQ AKF73564 3368294 3369361 + serine_endoprotease,_periplasmic degS AKF73565 3369424 3370362 - malate_dehydrogenase,_NAD(P)-binding mdh AKF73566 3370797 3371267 + l-arginine-responsive_arginine_metabolism regulon transcriptional regulator argR AKF73567 3371632 3371895 + cadmium_and_peroxide_resistance_protein, stress-induced yhcN AKF73568 3371951 3372223 - putative_barnase_inhibitor yhcO AKF73569 3372315 3374282 - p-hydroxybenzoic_acid_efflux_system_component aaeB AKF73570 3374288 3375220 - p-hydroxybenzoic_acid_efflux_system_component aaeA AKF73571 3375228 3375431 - DUF1656_family_putative_inner_membrane_efflux pump associated protein aaeX AKF73572 3375614 3376543 + transcriptional_regulator_for_aaeXAB_operon aaeR AKF73573 3376677 3378122 - putative_peptidase tldD AKF73574 3378552 3382352 - DUF3971-AsmA2_domains_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKF73549 90 682 107.449856734 0.0 PJR32596.1 AKF73551 97 507 100.0 1e-178 PJR32597.1 AKF73552 99 456 100.0 1e-160 PJR32599.1 AKF73554 100 611 100.0 0.0 PJR32600.1 AKF73555 99 536 100.0 0.0 >> 283. CP011323_0 Source: Escherichia coli strain SQ171, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: AKF69397 3334060 3334332 + phosphohistidinoprotein-hexose npr AKF69398 3334546 3335178 + Mg(2+)-starvation-stimulated_protein yrbL AKF69399 3335175 3335903 - biosynthetic_peptidoglycan_transglycosylase mtgA AKF69400 3335900 3336553 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB AKF69401 3336783 3339119 - aerobic_respiration_control_sensor_histidine arcB AKF69402 3339215 3340144 - putative_Fe-S_oxidoreductase,_Radical_SAM superfamily protein yhcC AKF69403 3340819 3345279 + glutamate_synthase,_large_subunit gltB AKF69404 3345292 3346710 + glutamate_synthase,_4Fe-4S_protein,_small subunit gltD AKF69405 3347270 3348034 + periplasmic_protein gltF AKF69406 3348206 3348880 + putative_periplasmic_chaperone_protein yhcA AKF69407 3348901 3351282 + putative_outer_membrane_fimbrial_subunit_usher protein yhcD AKF69408 3351796 3352812 - IS5_transposase_and_trans-activator insH1 AKF69409 3353020 3353736 + putative_transcriptional_regulator yhcF AKF69410 3353921 3355048 + DUF1016_family_protein_in_the_PD-(D/E)XK nuclease superfamily yhcG AKF69411 3355108 3355572 - DUF386_family_protein,_cupin_superfamily yhcH AKF69412 3355569 3356444 - N-acetylmannosamine_kinase nanK AKF69413 3356441 3357130 - putative_N-acetylmannosamine-6-P_epimerase nanE AKF69414 3357178 3358668 - sialic_acid_transporter nanT AKF69415 3358777 3359670 - N-acetylneuraminate_lyase nanA AKF69416 3359792 3360583 - sialic_acid-inducible_nan_operon_repressor nanR AKF69417 3360963 3362330 + putative_transporter dcuD AKF69418 3362373 3362870 - ClpXP_protease_specificity_enhancing_factor sspB AKF69419 3362876 3363514 - stringent_starvation_protein_A,_phage_P1_late sspA AKF69420 3363909 3364301 - 30S_ribosomal_subunit_protein_S9 rpsI AKF69421 3364317 3364745 - 50S_ribosomal_subunit_protein_L13 rplM AKF69422 3364964 3366091 - divisome_ATPase zapE AKF69423 3366285 3366683 + DUF1043_family_inner_membrane-anchored_protein yhcB AKF69424 3366837 3368204 + serine_endoprotease,_periplasmic degQ AKF69425 3368294 3369361 + serine_endoprotease,_periplasmic degS AKF69426 3369424 3370362 - malate_dehydrogenase,_NAD(P)-binding mdh AKF69427 3370797 3371267 + l-arginine-responsive_arginine_metabolism regulon transcriptional regulator argR AKF69428 3371632 3371895 + cadmium_and_peroxide_resistance_protein, stress-induced yhcN AKF69429 3371951 3372223 - putative_barnase_inhibitor yhcO AKF69430 3372315 3374282 - p-hydroxybenzoic_acid_efflux_system_component aaeB AKF69431 3374288 3375220 - p-hydroxybenzoic_acid_efflux_system_component aaeA AKF69432 3375228 3375431 - DUF1656_family_putative_inner_membrane_efflux pump associated protein aaeX AKF69433 3375614 3376543 + transcriptional_regulator_for_aaeXAB_operon aaeR AKF69434 3376677 3378122 - putative_peptidase tldD AKF69435 3378552 3382352 - DUF3971-AsmA2_domains_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKF69410 90 682 107.449856734 0.0 PJR32596.1 AKF69412 97 507 100.0 1e-178 PJR32597.1 AKF69413 99 456 100.0 1e-160 PJR32599.1 AKF69415 100 611 100.0 0.0 PJR32600.1 AKF69416 99 536 100.0 0.0 >> 284. CP011322_0 Source: Escherichia coli strain SQ110, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: AKF65257 3334059 3334331 + phosphohistidinoprotein-hexose npr AKF65258 3334545 3335177 + Mg(2+)-starvation-stimulated_protein yrbL AKF65259 3335174 3335902 - biosynthetic_peptidoglycan_transglycosylase mtgA AKF65260 3335899 3336552 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB AKF65261 3336782 3339118 - aerobic_respiration_control_sensor_histidine arcB AKF65262 3339214 3340143 - putative_Fe-S_oxidoreductase,_Radical_SAM superfamily protein yhcC AKF65263 3340818 3345278 + glutamate_synthase,_large_subunit gltB AKF65264 3345291 3346709 + glutamate_synthase,_4Fe-4S_protein,_small subunit gltD AKF65265 3347269 3348033 + periplasmic_protein gltF AKF65266 3348205 3348879 + putative_periplasmic_chaperone_protein yhcA AKF65267 3348900 3351281 + putative_outer_membrane_fimbrial_subunit_usher protein yhcD AKF65268 3351795 3352811 - IS5_transposase_and_trans-activator insH1 AKF65269 3353019 3353735 + putative_transcriptional_regulator yhcF AKF65270 3353920 3355047 + DUF1016_family_protein_in_the_PD-(D/E)XK nuclease superfamily yhcG AKF65271 3355107 3355571 - DUF386_family_protein,_cupin_superfamily yhcH AKF65272 3355568 3356443 - N-acetylmannosamine_kinase nanK AKF65273 3356440 3357129 - putative_N-acetylmannosamine-6-P_epimerase nanE AKF65274 3357177 3358667 - sialic_acid_transporter nanT AKF65275 3358776 3359669 - N-acetylneuraminate_lyase nanA AKF65276 3359791 3360582 - sialic_acid-inducible_nan_operon_repressor nanR AKF65277 3360962 3362329 + putative_transporter dcuD AKF65278 3362372 3362869 - ClpXP_protease_specificity_enhancing_factor sspB AKF65279 3362875 3363513 - stringent_starvation_protein_A,_phage_P1_late sspA AKF65280 3363908 3364300 - 30S_ribosomal_subunit_protein_S9 rpsI AKF65281 3364316 3364744 - 50S_ribosomal_subunit_protein_L13 rplM AKF65282 3364963 3366090 - divisome_ATPase zapE AKF65283 3366284 3366682 + DUF1043_family_inner_membrane-anchored_protein yhcB AKF65284 3366836 3368203 + serine_endoprotease,_periplasmic degQ AKF65285 3368293 3369360 + serine_endoprotease,_periplasmic degS AKF65286 3369423 3370361 - malate_dehydrogenase,_NAD(P)-binding mdh AKF65287 3370796 3371266 + l-arginine-responsive_arginine_metabolism regulon transcriptional regulator argR AKF65288 3371631 3371894 + cadmium_and_peroxide_resistance_protein, stress-induced yhcN AKF65289 3371950 3372222 - putative_barnase_inhibitor yhcO AKF65290 3372314 3374281 - p-hydroxybenzoic_acid_efflux_system_component aaeB AKF65291 3374287 3375219 - p-hydroxybenzoic_acid_efflux_system_component aaeA AKF65292 3375227 3375430 - DUF1656_family_putative_inner_membrane_efflux pump associated protein aaeX AKF65293 3375613 3376542 + transcriptional_regulator_for_aaeXAB_operon aaeR AKF65294 3376676 3378121 - putative_peptidase tldD AKF65295 3378551 3382351 - DUF3971-AsmA2_domains_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKF65270 90 682 107.449856734 0.0 PJR32596.1 AKF65272 97 507 100.0 1e-178 PJR32597.1 AKF65273 99 456 100.0 1e-160 PJR32599.1 AKF65275 100 611 100.0 0.0 PJR32600.1 AKF65276 99 536 100.0 0.0 >> 285. CP011321_0 Source: Escherichia coli strain SQ88, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: AKF61119 3334060 3334332 + phosphohistidinoprotein-hexose npr AKF61120 3334546 3335178 + Mg(2+)-starvation-stimulated_protein yrbL AKF61121 3335175 3335903 - biosynthetic_peptidoglycan_transglycosylase mtgA AKF61122 3335900 3336553 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB AKF61123 3336783 3339119 - aerobic_respiration_control_sensor_histidine arcB AKF61124 3339215 3340144 - putative_Fe-S_oxidoreductase,_Radical_SAM superfamily protein yhcC AKF61125 3340819 3345279 + glutamate_synthase,_large_subunit gltB AKF61126 3345292 3346710 + glutamate_synthase,_4Fe-4S_protein,_small subunit gltD AKF61127 3347270 3348034 + periplasmic_protein gltF AKF61128 3348206 3348880 + putative_periplasmic_chaperone_protein yhcA AKF61129 3348901 3351282 + putative_outer_membrane_fimbrial_subunit_usher protein yhcD AKF61130 3351796 3352812 - IS5_transposase_and_trans-activator insH1 AKF61131 3353020 3353736 + putative_transcriptional_regulator yhcF AKF61132 3353921 3355048 + DUF1016_family_protein_in_the_PD-(D/E)XK nuclease superfamily yhcG AKF61133 3355108 3355572 - DUF386_family_protein,_cupin_superfamily yhcH AKF61134 3355569 3356444 - N-acetylmannosamine_kinase nanK AKF61135 3356441 3357130 - putative_N-acetylmannosamine-6-P_epimerase nanE AKF61136 3357178 3358668 - sialic_acid_transporter nanT AKF61137 3358777 3359670 - N-acetylneuraminate_lyase nanA AKF61138 3359792 3360583 - sialic_acid-inducible_nan_operon_repressor nanR AKF61139 3360963 3362330 + putative_transporter dcuD AKF61140 3362373 3362870 - ClpXP_protease_specificity_enhancing_factor sspB AKF61141 3362876 3363514 - stringent_starvation_protein_A,_phage_P1_late sspA AKF61142 3363909 3364301 - 30S_ribosomal_subunit_protein_S9 rpsI AKF61143 3364317 3364745 - 50S_ribosomal_subunit_protein_L13 rplM AKF61144 3364964 3366091 - divisome_ATPase zapE AKF61145 3366285 3366683 + DUF1043_family_inner_membrane-anchored_protein yhcB AKF61146 3366837 3368204 + serine_endoprotease,_periplasmic degQ AKF61147 3368294 3369361 + serine_endoprotease,_periplasmic degS AKF61148 3369424 3370362 - malate_dehydrogenase,_NAD(P)-binding mdh AKF61149 3370797 3371267 + l-arginine-responsive_arginine_metabolism regulon transcriptional regulator argR AKF61150 3371632 3371895 + cadmium_and_peroxide_resistance_protein, stress-induced yhcN AKF61151 3371951 3372223 - putative_barnase_inhibitor yhcO AKF61152 3372315 3374282 - p-hydroxybenzoic_acid_efflux_system_component aaeB AKF61153 3374288 3375220 - p-hydroxybenzoic_acid_efflux_system_component aaeA AKF61154 3375228 3375431 - DUF1656_family_putative_inner_membrane_efflux pump associated protein aaeX AKF61155 3375614 3376543 + transcriptional_regulator_for_aaeXAB_operon aaeR AKF61156 3376677 3378122 - putative_peptidase tldD AKF61157 3378552 3382352 - DUF3971-AsmA2_domains_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKF61132 90 682 107.449856734 0.0 PJR32596.1 AKF61134 97 507 100.0 1e-178 PJR32597.1 AKF61135 99 456 100.0 1e-160 PJR32599.1 AKF61137 100 611 100.0 0.0 PJR32600.1 AKF61138 99 536 100.0 0.0 >> 286. CP011320_0 Source: Escherichia coli strain SQ37, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: AKF56979 3345206 3345478 + phosphohistidinoprotein-hexose npr AKF56980 3345692 3346324 + Mg(2+)-starvation-stimulated_protein yrbL AKF56981 3346321 3347049 - biosynthetic_peptidoglycan_transglycosylase mtgA AKF56982 3347046 3347699 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB AKF56983 3347929 3350265 - aerobic_respiration_control_sensor_histidine arcB AKF56984 3350361 3351290 - putative_Fe-S_oxidoreductase,_Radical_SAM superfamily protein yhcC AKF56985 3351965 3356425 + glutamate_synthase,_large_subunit gltB AKF56986 3356438 3357856 + glutamate_synthase,_4Fe-4S_protein,_small subunit gltD AKF56987 3358416 3359180 + periplasmic_protein gltF AKF56988 3359352 3360026 + putative_periplasmic_chaperone_protein yhcA AKF56989 3360047 3362428 + putative_outer_membrane_fimbrial_subunit_usher protein yhcD AKF56990 3362942 3363958 - IS5_transposase_and_trans-activator insH1 AKF56991 3364166 3364882 + putative_transcriptional_regulator yhcF AKF56992 3365067 3366194 + DUF1016_family_protein_in_the_PD-(D/E)XK nuclease superfamily yhcG AKF56993 3366254 3366718 - DUF386_family_protein,_cupin_superfamily yhcH AKF56994 3366715 3367590 - N-acetylmannosamine_kinase nanK AKF56995 3367587 3368276 - putative_N-acetylmannosamine-6-P_epimerase nanE AKF56996 3368324 3369814 - sialic_acid_transporter nanT AKF56997 3369923 3370816 - N-acetylneuraminate_lyase nanA AKF56998 3370938 3371729 - sialic_acid-inducible_nan_operon_repressor nanR AKF56999 3372109 3373476 + putative_transporter dcuD AKF57000 3373519 3374016 - ClpXP_protease_specificity_enhancing_factor sspB AKF57001 3374022 3374660 - stringent_starvation_protein_A,_phage_P1_late sspA AKF57002 3375055 3375447 - 30S_ribosomal_subunit_protein_S9 rpsI AKF57003 3375463 3375891 - 50S_ribosomal_subunit_protein_L13 rplM AKF57004 3376110 3377237 - divisome_ATPase zapE AKF57005 3377431 3377829 + DUF1043_family_inner_membrane-anchored_protein yhcB AKF57006 3377983 3379350 + serine_endoprotease,_periplasmic degQ AKF57007 3379440 3380507 + serine_endoprotease,_periplasmic degS AKF57008 3380570 3381508 - malate_dehydrogenase,_NAD(P)-binding mdh AKF57009 3381943 3382413 + l-arginine-responsive_arginine_metabolism regulon transcriptional regulator argR AKF57010 3382778 3383041 + cadmium_and_peroxide_resistance_protein, stress-induced yhcN AKF57011 3383097 3383369 - putative_barnase_inhibitor yhcO AKF57012 3383461 3385428 - p-hydroxybenzoic_acid_efflux_system_component aaeB AKF57013 3385434 3386366 - p-hydroxybenzoic_acid_efflux_system_component aaeA AKF57014 3386374 3386577 - DUF1656_family_putative_inner_membrane_efflux pump associated protein aaeX AKF57015 3386760 3387689 + transcriptional_regulator_for_aaeXAB_operon aaeR AKF57016 3387823 3389268 - putative_peptidase tldD AKF57017 3389698 3393498 - DUF3971-AsmA2_domains_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKF56992 90 682 107.449856734 0.0 PJR32596.1 AKF56994 97 507 100.0 1e-178 PJR32597.1 AKF56995 99 456 100.0 1e-160 PJR32599.1 AKF56997 100 611 100.0 0.0 PJR32600.1 AKF56998 99 536 100.0 0.0 >> 287. CP009789_0 Source: Escherichia coli K-12 strain ER3413, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: AIZ52979 3317060 3318025 - putative_inner_membrane_permease yhbE AIZ52980 3318152 3318409 - 50S_ribosomal_subunit_protein_L27 rpmA AIZ52982 3318430 3318741 - 50S_ribosomal_subunit_protein_L21 rplU AIZ52983 3319000 3319971 + octaprenyl_diphosphate_synthase ispB AIZ52984 3320199 3320477 + DNA-binding_transcriptional_activator_of_maltose metabolism sfsB AIZ52985 3320525 3321784 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA AIZ52986 3321839 3322093 - acid_stress_protein;_predicted_transcriptional regulator, BolA family ibaG AIZ52987 3322253 3322546 - ABC_transporter_maintaining_OM_lipid_asymmetry, cytoplasmic STAS component mlaB AIZ52988 3322546 3323181 - ABC_transporter_maintaining_OM_lipid_asymmetry, periplasmic binding protein mlaC AIZ52989 3323200 3323751 - ABC_transporter_maintaining_OM_lipid_asymmetry, anchored periplasmic binding protein mlaD AIZ52990 3323756 3324538 - ABC_transporter_maintaining_OM_lipid_asymmetry, inner membrane permease protein mlaE AIZ52991 3324546 3325355 - ABC_transporter_maintaining_OM_lipid_asymmetry, ATP-binding protein mlaF AIZ52992 3325565 3326542 + putative_calcium/sodium:proton_antiporter yrbG AIZ52993 3326556 3327542 + D-arabinose_5-phosphate_isomerase kdsD AIZ52994 3327563 3328129 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC AIZ52995 3328126 3328701 + lipopolysaccharide_export,_IM-tethered periplasmic protein of the LptBFGC export complex lptC AIZ52996 3328670 3329227 + periplasmic_LPS-binding_protein lptA AIZ52997 3329234 3329959 + lipopolysaccharide_export_ABC_transporter ATP-binding protein of the LptBFGC export complex lptB AIZ52998 3330007 3331440 + RNA_polymerase,_sigma_54_(sigma_N)_factor rpoN AIZ52999 3331463 3331750 + ribosome_hibernation_promoting_factor_HPF; stabilizes 70S dimers (100S) hpf AIZ53000 3331868 3332359 + sugar-specific_enzyme_IIA_component_of_PTS ptsN AIZ53001 3332405 3333259 + glmZ(sRNA)-inactivating_NTPase, glucosamine-6-phosphate regulated yhbJ AIZ53004 3333256 3333528 + phosphohistidinoprotein-hexose npr AIZ53005 3333742 3334374 + hypothetical_protein yrbL AIZ53006 3334642 3335658 - IS5_transposase_and_trans-activator insH1 AIZ53007 3335866 3336582 + putative_transcriptional_regulator yhcF AIZ53008 3336767 3337894 + hypothetical_protein yhcG AIZ53009 3337954 3338418 - hypothetical_protein yhcH AIZ53010 3338415 3339290 - N-acetylmannosamine_kinase nanK AIZ53011 3339287 3339976 - putative_N-acetylmannosamine-6-P_epimerase nanE AIZ53012 3340024 3341514 - sialic_acid_transporter nanT AIZ53014 3341623 3342516 - N-acetylneuraminate_lyase nanA AIZ53015 3342638 3343429 - DNA-binding_transcriptional_repressor_of_the_nan operon, induced by sialic acid nanR AIZ53016 3343809 3345176 + putative_transporter dcuD AIZ53017 3345219 3345716 - ClpXP_protease_specificity_enhancing_factor sspB AIZ53018 3345722 3346360 - stringent_starvation_protein_A sspA AIZ53019 3346755 3347147 - 30S_ribosomal_subunit_protein_S9 rpsI AIZ53020 3347163 3347591 - 50S_ribosomal_subunit_protein_L13 rplM AIZ53021 3347810 3348937 - conserved_protein_with_nucleoside_triphosphate hydrolase domain yhcM AIZ53022 3349131 3349529 + hypothetical_protein yhcB AIZ53023 3349683 3351050 + serine_endoprotease,_periplasmic degQ AIZ53025 3351140 3352207 + serine_endoprotease,_periplasmic degS AIZ53026 3352270 3353208 - malate_dehydrogenase,_NAD(P)-binding mdh AIZ53027 3353643 3354113 + DNA-binding_transcriptional_dual_regulator, L-arginine-binding argR AIZ53028 3354478 3354741 + hypothetical_protein yhcN AIZ53029 3354797 3355069 - putative_barnase_inhibitor yhcO AIZ53030 3355161 3357128 - p-hydroxybenzoic_acid_efflux_system_component aaeB AIZ53031 3357134 3358066 - p-hydroxybenzoic_acid_efflux_system_component aaeA AIZ53032 3358074 3358277 - membrane_protein_of_efflux_system aaeX AIZ53033 3358460 3359389 + transcriptional_regulator_for_aaeXAB_operon aaeR AIZ53034 3359523 3360968 - putative_peptidase tldD AIZ53036 3361398 3365198 - conserved_membrane_protein,_predicted transporter yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AIZ53008 90 682 107.449856734 0.0 PJR32596.1 AIZ53010 97 507 100.0 1e-178 PJR32597.1 AIZ53011 99 456 100.0 1e-160 PJR32599.1 AIZ53014 100 611 100.0 0.0 PJR32600.1 AIZ53015 99 536 100.0 0.0 >> 288. AP009048_0 Source: Escherichia coli str. K-12 substr. W3110 DNA, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2792 Table of genes, locations, strands and annotations of subject cluster: BAE77250 3347821 3348093 + phosphohistidinoprotein-hexose npr BAE77251 3348307 3348939 + hypothetical_protein yrbL BAE77252 3348936 3349664 - biosynthetic_peptidoglycan_transglycosylase mtgA BAE77253 3349661 3350314 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB BAE77254 3350544 3352880 - hybrid_sensory_histidine_kinase_in_two-component regulatory system with ArcA arcB BAE77255 3352976 3353905 - predicted_Fe-S_oxidoreductase yhcC BAE77256 3354487 3359040 + glutamate_synthase,_large_subunit gltB BAE77257 3359053 3360471 + glutamate_synthase,_4Fe-4S_protein,_small subunit gltD BAE77258 3361031 3361795 + periplasmic_protein gltF BAE77259 3361967 3362641 + predicted_periplasmic_chaperone_protein yhcA BAE77260 3362662 3365043 + predicted_outer_membrane_protein yhcD BAE77261 3365557 3366573 - IS5_transposase_and_trans-activator insH yhcE 3366536 3366784 + not_annotated no_locus_tag BAE77262 3366781 3367497 + predicted_transcriptional_regulator yhcF BAE77263 3367682 3368809 + conserved_hypothetical_protein yhcG BAE77264 3368869 3369333 - conserved_hypothetical_protein yhcH BAE77265 3369330 3370205 - predicted_N-acetylmannosamine_kinase nanK BAE77266 3370202 3370891 - predicted_N-acetylmannosamine-6-P_epimerase nanE BAE77267 3370939 3372429 - sialic_acid_transporter nanT BAE77268 3372538 3373431 - N-acetylneuraminate_lyase nanA BAE77269 3373553 3374344 - DNA-binding_transcriptional_dual_regulator nanR BAE77270 3374724 3376091 + predicted_transporter dcuD BAE77271 3376134 3376631 - ClpXP_protease_specificity-enhancing_factor sspB BAE77272 3376637 3377275 - stringent_starvation_protein_A sspA BAE77273 3377670 3378062 - 30S_ribosomal_subunit_protein_S9 rpsI BAE77274 3378078 3378506 - 50S_ribosomal_subunit_protein_L13 rplM BAE77275 3378725 3379852 - conserved_hypothetical_protein_with_nucleoside triphosphate hydrolase domain yhcM BAE77276 3380046 3380444 + conserved_hypothetical_protein yhcB BAE77277 3380598 3381965 + serine_endoprotease,_periplasmic degQ BAE77278 3382055 3383122 + serine_endoprotease,_periplasmic degS BAE77279 3383185 3384123 - malate_dehydrogenase,_NAD(P)-binding mdh BAE77280 3384558 3385028 + DNA-binding_transcriptional_dual_regulator, L-arginine-binding argR BAE77281 3385393 3385656 + conserved_hypothetical_protein yhcN BAE77282 3385712 3385984 - predicted_barnase_inhibitor yhcO BAE77283 3386076 3388043 - p-hydroxybenzoic_acid_efflux_system_component aaeB BAE77284 3388049 3388981 - p-hydroxybenzoic_acid_efflux_system_component aaeA BAE77285 3388989 3389192 - membrane_protein_of_efflux_system aaeX BAE77286 3389375 3390304 + predicted_DNA-binding_transcriptional_regulator, efflux system aaeR BAE77287 3390438 3391883 - predicted_peptidase tldD BAE77288 3392313 3396113 - conserved_membrane_protein,_predicted transporter yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 BAE77263 90 682 107.449856734 0.0 PJR32596.1 BAE77265 97 507 100.0 1e-178 PJR32597.1 BAE77266 99 456 100.0 1e-160 PJR32599.1 BAE77268 100 611 100.0 0.0 PJR32600.1 BAE77269 99 536 100.0 0.0 >> 289. CP041304_0 Source: Escherichia coli strain MSHS 133 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2587 Table of genes, locations, strands and annotations of subject cluster: QDJ60471 586046 587491 + metalloprotease_TldD tldD QDJ60472 587619 588548 - HTH-type_transcriptional_activator_AaeR aaeR QDJ60473 588731 588934 + DUF1656_domain-containing_protein FK544_03940 QDJ60474 588942 589874 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QDJ60475 589880 591847 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QDJ60476 591939 592211 + hypothetical_protein FK544_03955 QDJ60477 592266 592529 - peroxide/acid_stress_response_protein_YhcN yhcN QDJ60478 592895 593365 - transcriptional_regulator_ArgR argR QDJ60479 593800 594738 + malate_dehydrogenase mdh QDJ60480 594801 595868 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QDJ60481 595958 597325 - serine_endoprotease_DegQ degQ QDJ60482 597479 597877 - DUF1043_family_protein FK544_03985 QDJ60483 598071 599198 + cell_division_protein_ZapE FK544_03990 QDJ60484 599417 599845 + 50S_ribosomal_protein_L13 rplM QDJ60485 599861 600253 + 30S_ribosomal_protein_S9 rpsI QDJ60486 600648 601286 + stringent_starvation_protein_A sspA QDJ60487 601292 601789 + ClpXP_protease_specificity-enhancing_factor sspB QDJ60488 601833 603200 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QDJ60489 603580 604371 + transcriptional_regulator_NanR nanR QDJ60490 604493 605386 + N-acetylneuraminate_lyase nanA QDJ60491 605496 606986 + sialic_acid_transporter_NanT nanT QDJ60492 607034 607723 + N-acetylmannosamine-6-phosphate_2-epimerase FK544_04035 QDJ60493 607720 608595 + ROK_family_protein FK544_04040 QDJ60494 608592 609056 + DUF386_domain-containing_protein FK544_04045 QDJ60495 609116 610243 - DUF1016_domain-containing_protein FK544_04050 QDJ60496 610427 611845 - glutamate_synthase_small_subunit FK544_04055 QDJ64336 611858 616318 - glutamate_synthase_large_subunit gltB QDJ60497 616993 617922 + TIGR01212_family_radical_SAM_protein FK544_04065 QDJ60498 618018 620354 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QDJ60499 620584 621237 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QDJ60500 621234 621962 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QDJ60501 621959 622591 - PhoP_regulatory_network_protein_YrbL yrbL QDJ60502 622804 623076 - PTS_phosphocarrier_protein_NPr npr QDJ60503 623073 623927 - RNase_adapter_RapZ rapZ QDJ60504 623973 624464 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QDJ60505 624582 624869 - ribosome_hibernation_promoting_factor FK544_04105 QDJ60506 624892 626325 - RNA_polymerase_factor_sigma-54 rpoN QDJ60507 626373 627098 - LPS_export_ABC_transporter_ATP-binding_protein lptB QDJ60508 627105 627662 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QDJ60509 627631 628206 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QDJ60510 628203 628769 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QDJ60511 628790 629776 - arabinose-5-phosphate_isomerase_KdsD kdsD QDJ60512 629790 630767 - calcium/sodium_antiporter FK544_04140 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QDJ60495 90 691 107.449856734 0.0 PJR32595.1 QDJ60494 97 292 100.0 1e-98 PJR32597.1 QDJ60492 99 456 100.0 1e-160 PJR32599.1 QDJ60490 100 611 100.0 0.0 PJR32600.1 QDJ60489 100 537 100.0 0.0 >> 290. CP010157_0 Source: Escherichia coli strain D10, complete genome. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2587 Table of genes, locations, strands and annotations of subject cluster: APK42236 518256 519701 + protease_TldD tldD APK42237 519829 520758 - transcriptional_regulator RG43_02615 APK46362 520941 521144 + transporter RG43_02620 APK42238 521152 522084 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG43_02625 APK42239 522090 524057 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG43_02630 APK42240 524149 524421 + hypothetical_protein RG43_02635 APK42241 524476 524739 - membrane_protein RG43_02640 APK42242 525105 525575 - arginine_repressor RG43_02645 APK42243 526010 526948 + malate_dehydrogenase RG43_02650 APK42244 527011 528078 - serine_endoprotease RG43_02655 APK42245 528168 529535 - serine_endoprotease_DegQ RG43_02660 APK42246 529689 530087 - hypothetical_protein RG43_02665 APK42247 530281 531408 + hypothetical_protein RG43_02670 APK42248 531627 532055 + 50S_ribosomal_protein_L13 RG43_02675 APK42249 532071 532463 + 30S_ribosomal_protein_S9 RG43_02680 APK42250 532858 533496 + stringent_starvation_protein_A sspA APK42251 533502 533999 + Clp_protease_ClpP RG43_02690 APK42252 534043 535410 - C4-dicarboxylate_transporter RG43_02695 APK42253 535790 536581 + transcriptional_regulator_NanR RG43_02700 APK42254 536703 537596 + N-acetylneuraminate_lyase RG43_02705 APK42255 537706 539196 + sialic_acid_transporter RG43_02710 APK42256 539244 539933 + N-acetylmannosamine-6-phosphate_2-epimerase RG43_02715 APK42257 539930 540805 + N-acetylmannosamine_kinase RG43_02720 APK42258 540802 541266 + hypothetical_protein RG43_02725 APK42259 541326 542453 - hypothetical_protein RG43_02730 APK42260 542637 544055 - glutamate_synthase RG43_02735 APK46363 544068 548528 - glutamate_synthase gltB APK46364 549203 550132 + hypothetical_protein RG43_02745 APK42261 550228 552564 + aerobic_respiration_control_sensor_protein_ArcB RG43_02750 APK42262 552794 553447 + isoprenoid_biosynthesis_protein RG43_02755 APK42263 553444 554172 + peptidoglycan_transglycosylase mtgA APK42264 554169 554801 - hypothetical_protein RG43_02765 APK42265 555014 555286 - phosphohistidinoprotein-hexose phosphotransferase RG43_02770 APK42266 555283 556137 - glmZ(sRNA)-inactivating_NTPase RG43_02775 APK42267 556183 556674 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG43_02780 APK42268 556792 557079 - ribosome_hibernation_promoting_factor_HPF RG43_02785 APK42269 557102 558535 - RNA_polymerase_factor_sigma-54 RG43_02790 APK42270 558583 559308 - sugar_ABC_transporter_ATP-binding_protein RG43_02795 APK42271 559315 559872 - lipopolysaccharide_transporter RG43_02800 APK42272 559841 560416 - lipopolysaccharide_transporter RG43_02805 APK42273 560413 560979 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG43_02810 APK42274 561000 561986 - D-arabinose_5-phosphate_isomerase RG43_02815 APK42275 562000 562977 - calcium/sodium:proton_antiporter RG43_02820 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APK42259 90 691 107.449856734 0.0 PJR32595.1 APK42258 97 292 100.0 1e-98 PJR32597.1 APK42256 99 456 100.0 1e-160 PJR32599.1 APK42254 100 611 100.0 0.0 PJR32600.1 APK42253 100 537 100.0 0.0 >> 291. AP017610_0 Source: Escherichia coli DNA, complete genome, strain: 20Ec-P-124. Number of proteins with BLAST hits to this cluster: 6 MultiGeneBlast score: 6.0 Cumulative Blast bit score: 2587 Table of genes, locations, strands and annotations of subject cluster: BAX12659 3582996 3583982 + arabinose_5-phosphate_isomerase_KdsD kdsD_2 BAX12660 3584003 3584569 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC BAX12661 3584566 3585141 + lipopolysaccharide_export_system_protein_LptC lptC BAX12662 3585110 3585667 + lipopolysaccharide_export_system_protein_LptA precursor lptA BAX12663 3585674 3586399 + lipopolysaccharide_export_system_ATP-binding protein LptB lptB_1 BAX12664 3586447 3587880 + RNA_polymerase_sigma-54_factor rpoN BAX12665 3587903 3588190 + ribosome_hibernation_promoting_factor hpf BAX12666 3588308 3588799 + nitrogen_regulatory_protein ptsN BAX12667 3588845 3589699 + glmZ(sRNA)-inactivating_NTPase MRY16002_c33330 BAX12668 3589696 3589968 + phosphocarrier_protein_NPr ptsO BAX12669 3590181 3590813 + hypothetical_protein MRY16002_c33350 BAX12670 3590810 3591538 - penicillin-binding_protein_2D pbpG_2 BAX12671 3591535 3592188 - enhancing_lycopene_biosynthesis_protein_2 elbB BAX12672 3592418 3594754 - aerobic_respiration_control_sensor_protein_ArcB arcB BAX12673 3594850 3595779 - coproporphyrinogen_III_oxidase MRY16002_c33390 BAX12674 3596361 3600914 + glutamate_synthase_[NADPH]_large_chain precursor gltB BAX12675 3600927 3602345 + glutamate_synthase_[NADPH]_small_chain gltD_4 BAX12676 3602529 3603656 + hypothetical_protein MRY16002_c33420 BAX12677 3603716 3604180 - toxin-antitoxin_biofilm_protein_TabA tabA_1 BAX12678 3604177 3605052 - N-acetylmannosamine_kinase nanK_2 BAX12679 3605049 3605738 - putative_N-acetylmannosamine-6-phosphate 2-epimerase nanE_2 BAX12680 3605786 3607276 - putative_sialic_acid_transporter nanT BAX12681 3607386 3608279 - N-acetylneuraminate_lyase nanA BAX12682 3608401 3609192 - HTH-type_transcriptional_regulator_LutR lutR_1 BAX12683 3609572 3610939 + putative_cryptic_C4-dicarboxylate_transporter DcuD dcuD_2 BAX12684 3610983 3611480 - stringent_starvation_protein_B sspB BAX12685 3611486 3612124 - stringent_starvation_protein_A sspA BAX12686 3612519 3612911 - 30S_ribosomal_protein_S9 rpsI BAX12687 3612927 3613355 - 50S_ribosomal_protein_L13 rplM BAX12688 3613574 3614701 - hypothetical_protein MRY16002_c33540 BAX12689 3614895 3615293 + inner_membrane_protein_YhcB yhcB BAX12690 3615447 3616814 + periplasmic_pH-dependent_serine_endoprotease DegQ precursor degQ BAX12691 3616904 3617971 + serine_endoprotease_DegS degS BAX12692 3618034 3618972 - malate_dehydrogenase mdh_2 BAX12693 3619407 3619877 + arginine_repressor argR BAX12694 3620243 3620506 + multiple_stress_resistance_protein_BhsA precursor bhsA_5 BAX12695 3620561 3620833 - putative_barstar MRY16002_c33610 BAX12696 3620925 3622892 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB_2 BAX12697 3622898 3623830 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA_2 BAX12698 3623838 3624041 - efflux_system_membrane_protein MRY16002_c33640 BAX12699 3624224 3625153 + HTH-type_transcriptional_regulator_DmlR dmlR_6 BAX12700 3625281 3626726 - protease_TldD MRY16002_c33660 BAX12701 3626882 3630682 - hypothetical_protein MRY16002_c33670 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 BAX12676 90 691 107.449856734 0.0 PJR32595.1 BAX12677 97 292 100.0 1e-98 PJR32597.1 BAX12679 99 456 100.0 1e-160 PJR32599.1 BAX12681 100 611 100.0 0.0 PJR32600.1 BAX12682 100 537 100.0 0.0 >> 292. CP040269_0 Source: Escherichia coli strain 1500 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2594 Table of genes, locations, strands and annotations of subject cluster: QES62477 3499610 3501055 + metalloprotease_TldD tldD QES62478 3501189 3502118 - HTH-type_transcriptional_activator_AaeR aaeR QES62479 3502301 3502504 + DUF1656_domain-containing_protein EST53_16860 QES62480 3502512 3503444 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QES62481 3503450 3505417 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QES62482 3505509 3505781 + hypothetical_protein EST53_16875 QES62483 3505837 3506100 - peroxide/acid_stress_response_protein_YhcN yhcN QES62484 3506465 3506935 - transcriptional_regulator_ArgR argR QES62485 3507370 3508308 + malate_dehydrogenase mdh QES62486 3508371 3509438 - serine_endoprotease_DegS EST53_16895 QES62487 3509528 3510895 - serine_endoprotease_DegQ degQ QES62488 3511049 3511447 - DUF1043_family_protein EST53_16905 QES62489 3511641 3512768 + cell_division_protein_ZapE EST53_16910 QES62490 3512987 3513415 + 50S_ribosomal_protein_L13 rplM QES62491 3513431 3513823 + 30S_ribosomal_protein_S9 rpsI QES62492 3513741 3513962 - hypothetical_protein EST53_16925 QES62493 3514218 3514856 + stringent_starvation_protein_A sspA QES62494 3514862 3515359 + ClpXP_protease_specificity-enhancing_factor sspB QES62495 3515402 3516769 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QES62496 3517149 3517940 + transcriptional_regulator_NanR nanR QES62497 3518062 3518955 + N-acetylneuraminate_lyase nanA QES62498 3519064 3520554 + sialic_acid_transporter_NanT nanT QES62499 3520602 3521291 + N-acetylmannosamine-6-phosphate_2-epimerase EST53_16960 QES63724 3521288 3522163 + N-acetylmannosamine_kinase EST53_16965 QES62500 3522160 3522624 + DUF386_domain-containing_protein EST53_16970 QES62501 3522700 3523005 - transposase EST53_16975 QES62502 3523022 3523501 - DUF1016_domain-containing_protein EST53_16980 QES62503 3523685 3525103 - glutamate_synthase EST53_16985 QES63725 3525116 3529576 - glutamate_synthase_large_subunit gltB QES62504 3530251 3531180 + TIGR01212_family_radical_SAM_protein EST53_16995 QES62505 3531276 3533612 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QES62506 3533842 3534495 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QES62507 3534492 3535220 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QES62508 3535217 3535849 - PhoP_regulatory_network_protein_YrbL yrbL QES62509 3536063 3536335 - PTS_phosphocarrier_protein_NPr npr QES62510 3536332 3537186 - RNase_adapter_RapZ rapZ QES62511 3537232 3537723 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QES62512 3537841 3538128 - ribosome_hibernation_promoting_factor EST53_17035 QES62513 3538151 3539584 - RNA_polymerase_factor_sigma-54 rpoN QES62514 3539632 3540357 - LPS_export_ABC_transporter_ATP-binding_protein lptB QES62515 3540364 3540921 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QES62516 3540890 3541465 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 QES62499 99 456 100.0 1e-160 PJR32598.1 QES62498 99 990 100.0 0.0 PJR32599.1 QES62497 100 611 100.0 0.0 PJR32600.1 QES62496 100 537 100.0 0.0 >> 293. CP010219_0 Source: Escherichia coli strain M18, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2594 Table of genes, locations, strands and annotations of subject cluster: APL33284 2239910 2240467 + lipopolysaccharide_transporter RG62_11090 APL33285 2240474 2241199 + sugar_ABC_transporter_ATP-binding_protein RG62_11095 APL33286 2241247 2242680 + RNA_polymerase_factor_sigma-54 RG62_11100 APL33287 2242703 2242990 + ribosome_hibernation_promoting_factor_HPF RG62_11105 APL33288 2243108 2243599 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG62_11110 APL33289 2243645 2244499 + glmZ(sRNA)-inactivating_NTPase RG62_11115 APL33290 2244496 2244768 + phosphohistidinoprotein-hexose phosphotransferase RG62_11120 APL33291 2244982 2245614 + hypothetical_protein RG62_11125 APL33292 2245611 2246339 - peptidoglycan_transglycosylase mtgA APL33293 2246336 2246989 - isoprenoid_biosynthesis_protein RG62_11135 APL33294 2247219 2249555 - aerobic_respiration_control_sensor_protein_ArcB RG62_11140 APL35947 2249651 2250580 - hypothetical_protein RG62_11145 APL35948 2251255 2255715 + glutamate_synthase gltB APL33295 2255728 2257146 + glutamate_synthase RG62_11155 APL33296 2257330 2258442 + hypothetical_protein RG62_11160 APL33297 2258502 2258966 - hypothetical_protein RG62_11165 APL33298 2258963 2259838 - N-acetylmannosamine_kinase RG62_11170 APL33299 2259835 2260524 - N-acetylmannosamine-6-phosphate_2-epimerase RG62_11175 APL33300 2260572 2262062 - sialic_acid_transporter RG62_11180 APL33301 2262172 2263065 - N-acetylneuraminate_lyase RG62_11185 APL33302 2263187 2263978 - transcriptional_regulator_NanR RG62_11190 APL33303 2264358 2265725 + C4-dicarboxylate_transporter RG62_11195 APL33304 2265768 2266265 - Clp_protease_ClpP RG62_11200 APL33305 2266271 2266909 - stringent_starvation_protein_A sspA APL33306 2267304 2267696 - 30S_ribosomal_protein_S9 RG62_11210 APL33307 2267712 2268140 - 50S_ribosomal_protein_L13 RG62_11215 APL33308 2268359 2269486 - hypothetical_protein RG62_11220 APL33309 2269680 2270078 + hypothetical_protein RG62_11225 APL33310 2270232 2271599 + serine_endoprotease_DegQ RG62_11230 APL33311 2271689 2272756 + serine_endoprotease RG62_11235 APL33312 2272819 2273757 - malate_dehydrogenase RG62_11240 APL33313 2274192 2274662 + arginine_repressor RG62_11245 APL33314 2275027 2275290 + membrane_protein RG62_11250 APL33315 2275346 2275618 - hypothetical_protein RG62_11255 APL33316 2275710 2277677 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG62_11260 APL33317 2277683 2278615 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG62_11265 APL35949 2278623 2278826 - transporter RG62_11270 APL33318 2279009 2279938 + transcriptional_regulator RG62_11275 APL33319 2280066 2281511 - protease_TldD tldD APL33320 2281667 2285467 - hypothetical_protein RG62_11285 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 APL33299 99 456 100.0 1e-160 PJR32598.1 APL33300 99 990 100.0 0.0 PJR32599.1 APL33301 100 611 100.0 0.0 PJR32600.1 APL33302 100 537 100.0 0.0 >> 294. CP010183_0 Source: Escherichia coli strain M3, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2594 Table of genes, locations, strands and annotations of subject cluster: APK99356 2632323 2633768 + protease_TldD tldD APK99357 2633896 2634825 - transcriptional_regulator RG55_13075 APL01537 2635008 2635211 + transporter RG55_13080 APK99358 2635219 2636151 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG55_13085 APK99359 2636157 2638124 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG55_13090 APK99360 2638216 2638488 + hypothetical_protein RG55_13095 APK99361 2638544 2638807 - membrane_protein RG55_13100 APK99362 2639172 2639642 - arginine_repressor RG55_13105 APK99363 2640077 2641015 + malate_dehydrogenase RG55_13110 APK99364 2641078 2642145 - serine_endoprotease RG55_13115 APK99365 2642235 2643602 - serine_endoprotease_DegQ RG55_13120 APK99366 2643756 2644154 - hypothetical_protein RG55_13125 APK99367 2644348 2645475 + hypothetical_protein RG55_13130 APK99368 2645694 2646122 + 50S_ribosomal_protein_L13 RG55_13135 APK99369 2646138 2646530 + 30S_ribosomal_protein_S9 RG55_13140 APK99370 2646925 2647563 + stringent_starvation_protein_A sspA APK99371 2647569 2648066 + Clp_protease_ClpP RG55_13150 APK99372 2648109 2649476 - C4-dicarboxylate_transporter RG55_13155 APK99373 2649856 2650647 + transcriptional_regulator_NanR RG55_13160 APK99374 2650769 2651662 + N-acetylneuraminate_lyase RG55_13165 APK99375 2651772 2653262 + sialic_acid_transporter RG55_13170 APK99376 2653310 2653999 + N-acetylmannosamine-6-phosphate_2-epimerase RG55_13175 APK99377 2653996 2654871 + N-acetylmannosamine_kinase RG55_13180 APK99378 2654868 2655332 + hypothetical_protein RG55_13185 APK99379 2655392 2656504 - hypothetical_protein RG55_13190 APK99380 2656688 2658106 - glutamate_synthase RG55_13195 APL01538 2658119 2662579 - glutamate_synthase gltB APL01539 2663254 2664183 + hypothetical_protein RG55_13205 APK99381 2664279 2666615 + aerobic_respiration_control_sensor_protein_ArcB RG55_13210 APK99382 2666845 2667498 + isoprenoid_biosynthesis_protein RG55_13215 APK99383 2667495 2668223 + peptidoglycan_transglycosylase mtgA APK99384 2668220 2668852 - hypothetical_protein RG55_13225 APK99385 2669065 2669337 - phosphohistidinoprotein-hexose phosphotransferase RG55_13230 APK99386 2669334 2670188 - glmZ(sRNA)-inactivating_NTPase RG55_13235 APK99387 2670234 2670725 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG55_13240 APK99388 2670843 2671130 - ribosome_hibernation_promoting_factor_HPF RG55_13245 APK99389 2671153 2672586 - RNA_polymerase_factor_sigma-54 RG55_13250 APK99390 2672634 2673359 - sugar_ABC_transporter_ATP-binding_protein RG55_13255 APK99391 2673366 2673923 - lipopolysaccharide_transporter RG55_13260 APK99392 2673892 2674467 - lipopolysaccharide_transporter RG55_13265 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 APK99376 99 456 100.0 1e-160 PJR32598.1 APK99375 99 990 100.0 0.0 PJR32599.1 APK99374 100 611 100.0 0.0 PJR32600.1 APK99373 100 537 100.0 0.0 >> 295. CP010180_0 Source: Escherichia coli strain M1, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2594 Table of genes, locations, strands and annotations of subject cluster: APK94136 2257983 2258540 + lipopolysaccharide_transporter RG54_11200 APK94137 2258547 2259272 + sugar_ABC_transporter_ATP-binding_protein RG54_11205 APK94138 2259320 2260753 + RNA_polymerase_factor_sigma-54 RG54_11210 APK94139 2260776 2261063 + ribosome_hibernation_promoting_factor_HPF RG54_11215 APK94140 2261181 2261672 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG54_11220 APK94141 2261718 2262572 + glmZ(sRNA)-inactivating_NTPase RG54_11225 APK94142 2262569 2262841 + phosphohistidinoprotein-hexose phosphotransferase RG54_11230 APK94143 2263054 2263686 + hypothetical_protein RG54_11235 APK94144 2263683 2264411 - peptidoglycan_transglycosylase mtgA APK94145 2264408 2265061 - isoprenoid_biosynthesis_protein RG54_11245 APK94146 2265291 2267627 - aerobic_respiration_control_sensor_protein_ArcB RG54_11250 APK96676 2267723 2268652 - hypothetical_protein RG54_11255 APK96677 2269327 2273787 + glutamate_synthase gltB APK94147 2273800 2275218 + glutamate_synthase RG54_11265 APK94148 2275402 2276514 + hypothetical_protein RG54_11270 APK94149 2276574 2277038 - hypothetical_protein RG54_11275 APK94150 2277035 2277910 - N-acetylmannosamine_kinase RG54_11280 APK94151 2277907 2278596 - N-acetylmannosamine-6-phosphate_2-epimerase RG54_11285 APK94152 2278644 2280134 - sialic_acid_transporter RG54_11290 APK94153 2280244 2281137 - N-acetylneuraminate_lyase RG54_11295 APK94154 2281259 2282050 - transcriptional_regulator_NanR RG54_11300 APK94155 2282430 2283797 + C4-dicarboxylate_transporter RG54_11305 APK94156 2283840 2284337 - Clp_protease_ClpP RG54_11310 APK94157 2284343 2284981 - stringent_starvation_protein_A sspA APK94158 2285376 2285768 - 30S_ribosomal_protein_S9 RG54_11320 APK94159 2285784 2286212 - 50S_ribosomal_protein_L13 RG54_11325 APK94160 2286431 2287558 - hypothetical_protein RG54_11330 APK94161 2287752 2288150 + hypothetical_protein RG54_11335 APK94162 2288304 2289671 + serine_endoprotease_DegQ RG54_11340 APK94163 2289761 2290828 + serine_endoprotease RG54_11345 APK94164 2290891 2291829 - malate_dehydrogenase RG54_11350 APK94165 2292264 2292734 + arginine_repressor RG54_11355 APK94166 2293099 2293362 + membrane_protein RG54_11360 APK94167 2293418 2293690 - hypothetical_protein RG54_11365 APK94168 2293782 2295749 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG54_11370 APK94169 2295755 2296687 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG54_11375 APK96678 2296695 2296898 - transporter RG54_11380 APK94170 2297081 2298010 + transcriptional_regulator RG54_11385 APK94171 2298138 2299583 - protease_TldD tldD APK94172 2299739 2303539 - hypothetical_protein RG54_11395 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 APK94151 99 456 100.0 1e-160 PJR32598.1 APK94152 99 990 100.0 0.0 PJR32599.1 APK94153 100 611 100.0 0.0 PJR32600.1 APK94154 100 537 100.0 0.0 >> 296. LR134157_0 Source: Escherichia coli strain NCTC11105 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: VEA80385 524903 526348 + TldD_protein tldD VEA80386 526483 527412 - LysR_family_transcriptional_regulator aaeR VEA80387 527595 527798 + protein_AaeX aaeX VEA80388 527806 528738 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VEA80389 528744 530711 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VEA80390 530803 531075 + barnase_inhibitor yhcO VEA80391 531131 531394 - protein_YcfR ycfR VEA80392 531758 532228 - arginine_repressor argR VEA80393 532663 533601 + malate_dehydrogenase mdh VEA80394 533664 534731 - protease degS VEA80395 534821 536188 - serine_endoprotease degQ VEA80396 536342 536740 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VEA80397 536934 537794 + putative_ATP/GTP-binding_protein yhcM_1 VEA80398 537829 538062 + putative_ATP/GTP-binding_protein yhcM_2 VEA80399 538281 538709 + 50S_ribosomal_protein_L13 rplM VEA80400 538725 539117 + 30S_ribosomal_protein_S9 rpsI VEA80401 539512 540150 + stringent_starvation_protein_A sspA VEA80402 540156 540653 + stringent_starvation_protein_B sspB VEA80403 540695 542062 - C4-dicarboxylate_transporter dcuD VEA80404 542442 543233 + GntR_family_transcriptional_regulator nanR VEA80405 543355 544248 + N-acetylneuraminate_lyase nanA VEA80406 544358 545848 + sialic_acid_transporter nanT VEA80407 545896 546585 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VEA80408 546582 547457 + putative_transcriptional_regulator nanK VEA80409 547454 547918 + beta-galactosidase yhcH VEA80410 547978 548526 - Uncharacterized_conserved_protein NCTC11105_00567 VEA80411 549186 549401 + Insertion_element_protein NCTC11105_00568 VEA80412 549532 550950 - glutamate_synthase_(NADPH)_small_subunit gltD VEA80413 550963 555516 - glutamate_synthase_subunit_alpha gltB VEA80414 556098 557027 + putative_radical_SAM_protein NCTC11105_00571 VEA80415 557123 559459 + aerobic_respiration_control_protein arcB VEA80416 559689 560342 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VEA80417 560339 561067 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VEA80418 561064 561696 - protein yrbL VEA80419 561910 562182 - phosphocarrier_protein ptsO VEA80420 562179 563033 - putative_ATPase yhbJ VEA80421 563079 563570 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN VEA80422 563688 563975 - putative_sigma(54)_modulation_protein yhbH VEA80423 563998 565431 - RNA_polymerase_sigma-54_factor_(sigma-N) rpoN VEA80424 565479 566204 - lipopolysaccharide_ABC_transporter lptB VEA80425 566211 566768 - lipopolysaccharide_transport_periplasmic_protein LptA yhbN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 VEA80407 99 456 100.0 1e-160 PJR32598.1 VEA80406 99 990 100.0 0.0 PJR32599.1 VEA80405 100 611 100.0 0.0 PJR32600.1 VEA80404 99 536 100.0 0.0 >> 297. CP050865_0 Source: Escherichia coli strain 8-3-Ti3 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: QIV74801 2131426 2132859 + RNA_polymerase_factor_sigma-54 rpoN QIV74802 2132882 2133169 + ribosome_hibernation_promoting_factor hpf QIV74803 2133287 2133778 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QIV74804 2133824 2134678 + RNase_adapter_RapZ rapZ QIV74805 2134675 2134947 + PTS_phosphocarrier_protein_NPr npr QIV74806 2135161 2135793 + PhoP_regulatory_network_protein_YrbL yrbL QIV74807 2135790 2136518 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QIV74808 2136515 2137168 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIV74809 2137398 2139734 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIV74810 2139830 2140759 - TIGR01212_family_radical_SAM_protein HFC66_10815 QIV77225 2141434 2145894 + glutamate_synthase_large_subunit gltB QIV74811 2145907 2147325 + glutamate_synthase_subunit_GltD gltD HFC66_10830 2147584 2148281 + IS1_family_transposase no_locus_tag QIV74812 2148283 2149398 + DUF1016_domain-containing_protein HFC66_10835 QIV74813 2149458 2149922 - DUF386_domain-containing_protein HFC66_10840 QIV77226 2149919 2150794 - N-acetylmannosamine_kinase nanK QIV74814 2150791 2151480 - N-acetylmannosamine-6-phosphate_2-epimerase HFC66_10850 QIV74815 2151528 2153018 - sialic_acid_transporter_NanT nanT QIV74816 2153127 2154020 - N-acetylneuraminate_lyase nanA QIV74817 2154142 2154933 - transcriptional_regulator_NanR nanR QIV74818 2155313 2156680 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIV74819 2156723 2157220 - ClpXP_protease_specificity-enhancing_factor sspB QIV74820 2157226 2157864 - stringent_starvation_protein_A sspA QIV74821 2158258 2158650 - 30S_ribosomal_protein_S9 rpsI QIV74822 2158666 2159094 - 50S_ribosomal_protein_L13 rplM QIV74823 2159313 2160440 - cell_division_protein_ZapE zapE QIV74824 2160634 2161032 + DUF1043_family_protein HFC66_10900 QIV74825 2161186 2162553 + serine_endoprotease_DegQ degQ QIV74826 2162643 2163710 + outer_membrane-stress_sensor_serine endopeptidase DegS degS QIV74827 2163773 2164711 - malate_dehydrogenase mdh QIV74828 2165146 2165616 + transcriptional_regulator_ArgR argR QIV77227 2165981 2166244 + peroxide/acid_stress_response_protein_YhcN yhcN QIV74829 2166300 2166572 - hypothetical_protein HFC66_10930 QIV74830 2166664 2168631 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIV74831 2168637 2169569 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA HFC66_10945 2169607 2170304 - IS1_family_transposase no_locus_tag QIV74832 2170338 2170556 - AaeX_family_protein HFC66_10950 QIV74833 2170739 2171668 + HTH-type_transcriptional_activator_AaeR aaeR QIV74834 2171796 2173241 - metalloprotease_TldD tldD QIV74835 2173397 2177197 - AsmA2_domain-containing_protein HFC66_10965 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 QIV74814 99 456 100.0 1e-160 PJR32598.1 QIV74815 99 990 100.0 0.0 PJR32599.1 QIV74816 100 611 100.0 0.0 PJR32600.1 QIV74817 99 536 100.0 0.0 >> 298. CP050862_0 Source: Escherichia coli strain 8-3-DC15 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: QIV71738 3883804 3885237 + RNA_polymerase_factor_sigma-54 rpoN QIV71739 3885260 3885547 + ribosome_hibernation_promoting_factor hpf QIV71740 3885665 3886156 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QIV71741 3886202 3887056 + RNase_adapter_RapZ rapZ QIV71742 3887053 3887325 + PTS_phosphocarrier_protein_NPr npr QIV71743 3887539 3888171 + PhoP_regulatory_network_protein_YrbL yrbL QIV71744 3888168 3888896 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QIV71745 3888893 3889546 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIV71746 3889776 3892112 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIV71747 3892208 3893137 - TIGR01212_family_radical_SAM_protein HFC67_19960 QIV72801 3893812 3898272 + glutamate_synthase_large_subunit gltB QIV71748 3898285 3899703 + glutamate_synthase_subunit_GltD gltD HFC67_19975 3899962 3900659 + IS1_family_transposase no_locus_tag QIV71749 3900661 3901776 + DUF1016_domain-containing_protein HFC67_19980 QIV71750 3901836 3902300 - DUF386_domain-containing_protein HFC67_19985 QIV72802 3902297 3903172 - N-acetylmannosamine_kinase nanK QIV71751 3903169 3903858 - N-acetylmannosamine-6-phosphate_2-epimerase HFC67_19995 QIV71752 3903906 3905396 - sialic_acid_transporter_NanT nanT QIV71753 3905505 3906398 - N-acetylneuraminate_lyase nanA QIV71754 3906520 3907311 - transcriptional_regulator_NanR nanR QIV71755 3907691 3909058 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIV71756 3909101 3909598 - ClpXP_protease_specificity-enhancing_factor sspB QIV71757 3909604 3910242 - stringent_starvation_protein_A sspA QIV71758 3910636 3911028 - 30S_ribosomal_protein_S9 rpsI QIV71759 3911044 3911472 - 50S_ribosomal_protein_L13 rplM QIV71760 3911691 3912818 - cell_division_protein_ZapE zapE QIV71761 3913012 3913410 + DUF1043_family_protein HFC67_20045 QIV71762 3913564 3914931 + serine_endoprotease_DegQ degQ QIV71763 3915021 3916088 + outer_membrane-stress_sensor_serine endopeptidase DegS degS QIV71764 3916151 3917089 - malate_dehydrogenase mdh QIV71765 3917524 3917994 + transcriptional_regulator_ArgR argR QIV72803 3918359 3918622 + peroxide/acid_stress_response_protein_YhcN yhcN QIV71766 3918678 3918950 - hypothetical_protein HFC67_20075 QIV71767 3919042 3921009 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIV71768 3921015 3921947 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA HFC67_20090 3921985 3922682 - IS1_family_transposase no_locus_tag QIV71769 3922716 3922934 - AaeX_family_protein HFC67_20095 QIV71770 3923117 3924046 + HTH-type_transcriptional_activator_AaeR aaeR QIV71771 3924174 3925619 - metalloprotease_TldD tldD QIV71772 3925775 3929575 - AsmA2_domain-containing_protein HFC67_20110 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 QIV71751 99 456 100.0 1e-160 PJR32598.1 QIV71752 99 990 100.0 0.0 PJR32599.1 QIV71753 100 611 100.0 0.0 PJR32600.1 QIV71754 99 536 100.0 0.0 >> 299. CP043946_0 Source: Escherichia coli strain AR202.2 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: QER57387 491754 493199 + metalloprotease_TldD tldD QER57388 493333 494262 - HTH-type_transcriptional_activator_AaeR aaeR QER57389 494445 494648 + DUF1656_domain-containing_protein F3P13_02375 QER57390 494656 495588 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QER57391 495594 497561 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QER57392 497653 497925 + hypothetical_protein F3P13_02390 QER57393 497981 498244 - peroxide/acid_stress_response_protein_YhcN yhcN QER57394 498609 499079 - transcriptional_regulator_ArgR argR QER57395 499514 500452 + malate_dehydrogenase mdh QER57396 500515 501582 - serine_endoprotease_DegS F3P13_02410 QER57397 501672 503039 - serine_endoprotease_DegQ degQ QER57398 503193 503591 - DUF1043_family_protein F3P13_02420 QER57399 503785 504912 + cell_division_protein_ZapE F3P13_02425 QER57400 505131 505559 + 50S_ribosomal_protein_L13 rplM QER57401 505575 505967 + 30S_ribosomal_protein_S9 rpsI QER57402 506362 507000 + stringent_starvation_protein_A sspA QER57403 507006 507503 + ClpXP_protease_specificity-enhancing_factor sspB QER57404 507546 508913 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QER57405 509293 510084 + transcriptional_regulator_NanR nanR QER57406 510206 511099 + N-acetylneuraminate_lyase nanA QER57407 511208 512698 + sialic_acid_transporter_NanT nanT QER57408 512746 513435 + N-acetylmannosamine-6-phosphate_2-epimerase F3P13_02470 QER57409 513432 514307 + N-acetylmannosamine_kinase F3P13_02475 QER57410 514304 514768 + DUF386_domain-containing_protein F3P13_02480 QER61165 514828 515688 - DUF1016_domain-containing_protein F3P13_02485 F3P13_02490 515776 516515 + IS3_family_transposase no_locus_tag QER57411 516508 516879 - hypothetical_protein F3P13_02495 QER61166 517188 518696 + group_II_intron_reverse_transcriptase/maturase ltrA F3P13_02505 518786 519259 + IS3_family_transposase no_locus_tag F3P13_02510 519302 519538 - DUF1016_domain-containing_protein no_locus_tag QER57412 519723 520439 - DUF1120_domain-containing_protein F3P13_02515 QER57413 520436 520981 - hypothetical_protein F3P13_02520 QER57414 520978 523359 - fimbrial_biogenesis_outer_membrane_usher protein F3P13_02525 QER57415 523380 524054 - fimbria/pilus_periplasmic_chaperone F3P13_02530 QER57416 524226 524990 - DUF1120_domain-containing_protein F3P13_02535 QER57417 525550 526968 - glutamate_synthase F3P13_02540 QER61167 526981 531441 - glutamate_synthase_large_subunit gltB QER57418 532116 533045 + TIGR01212_family_radical_SAM_protein F3P13_02550 QER57419 533141 535477 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 QER57408 99 456 100.0 1e-160 PJR32598.1 QER57407 99 990 100.0 0.0 PJR32599.1 QER57406 100 611 100.0 0.0 PJR32600.1 QER57405 99 536 100.0 0.0 >> 300. CP043942_0 Source: Escherichia coli strain AR216.2b chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: QER62116 491754 493199 + metalloprotease_TldD tldD QER62117 493333 494262 - HTH-type_transcriptional_activator_AaeR aaeR QER62118 494445 494648 + DUF1656_domain-containing_protein F3P14_02375 QER62119 494656 495588 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QER62120 495594 497561 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QER62121 497653 497925 + hypothetical_protein F3P14_02390 QER62122 497981 498244 - peroxide/acid_stress_response_protein_YhcN yhcN QER62123 498609 499079 - transcriptional_regulator_ArgR argR QER62124 499514 500452 + malate_dehydrogenase mdh QER62125 500515 501582 - serine_endoprotease_DegS F3P14_02410 QER62126 501672 503039 - serine_endoprotease_DegQ degQ QER62127 503193 503591 - DUF1043_family_protein F3P14_02420 QER62128 503785 504912 + cell_division_protein_ZapE F3P14_02425 QER62129 505131 505559 + 50S_ribosomal_protein_L13 rplM QER62130 505575 505967 + 30S_ribosomal_protein_S9 rpsI QER62131 506362 507000 + stringent_starvation_protein_A sspA QER62132 507006 507503 + ClpXP_protease_specificity-enhancing_factor sspB QER62133 507546 508913 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QER62134 509293 510084 + transcriptional_regulator_NanR nanR QER62135 510206 511099 + N-acetylneuraminate_lyase nanA QER62136 511208 512698 + sialic_acid_transporter_NanT nanT QER62137 512746 513435 + N-acetylmannosamine-6-phosphate_2-epimerase F3P14_02470 QER62138 513432 514307 + N-acetylmannosamine_kinase F3P14_02475 QER62139 514304 514768 + DUF386_domain-containing_protein F3P14_02480 QER65899 514828 515688 - DUF1016_domain-containing_protein F3P14_02485 F3P14_02490 515776 516515 + IS3_family_transposase no_locus_tag QER62140 516508 516879 - hypothetical_protein F3P14_02495 QER65900 517188 518696 + group_II_intron_reverse_transcriptase/maturase ltrA F3P14_02505 518786 519259 + IS3_family_transposase no_locus_tag F3P14_02510 519302 519538 - DUF1016_domain-containing_protein no_locus_tag QER62141 519723 520439 - DUF1120_domain-containing_protein F3P14_02515 QER62142 520436 520981 - hypothetical_protein F3P14_02520 QER62143 520978 523359 - fimbrial_biogenesis_outer_membrane_usher protein F3P14_02525 QER62144 523380 524054 - fimbria/pilus_periplasmic_chaperone F3P14_02530 QER62145 524226 524990 - DUF1120_domain-containing_protein F3P14_02535 QER62146 525550 526968 - glutamate_synthase F3P14_02540 QER65901 526981 531441 - glutamate_synthase_large_subunit gltB QER62147 532116 533045 + TIGR01212_family_radical_SAM_protein F3P14_02550 QER62148 533141 535477 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 QER62137 99 456 100.0 1e-160 PJR32598.1 QER62136 99 990 100.0 0.0 PJR32599.1 QER62135 100 611 100.0 0.0 PJR32600.1 QER62134 99 536 100.0 0.0 >> 301. CP041392_0 Source: Escherichia coli strain ECOL-18-VL-LA-PA-Ryan-0026 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: QDM02955 491753 493198 + metalloprotease_TldD tldD QDM02956 493332 494261 - HTH-type_transcriptional_activator_AaeR aaeR QDM02957 494444 494647 + DUF1656_domain-containing_protein E3Z24_02375 QDM02958 494655 495587 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QDM02959 495593 497560 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QDM02960 497652 497924 + hypothetical_protein E3Z24_02390 QDM02961 497980 498243 - peroxide/acid_stress_response_protein_YhcN yhcN QDM02962 498608 499078 - transcriptional_regulator_ArgR argR QDM02963 499513 500451 + malate_dehydrogenase mdh QDM02964 500514 501581 - serine_endoprotease_DegS E3Z24_02410 QDM02965 501671 503038 - serine_endoprotease_DegQ degQ QDM02966 503192 503590 - DUF1043_family_protein E3Z24_02420 QDM02967 503784 504911 + cell_division_protein_ZapE E3Z24_02425 QDM02968 505130 505558 + 50S_ribosomal_protein_L13 rplM QDM02969 505574 505966 + 30S_ribosomal_protein_S9 rpsI QDM02970 506361 506999 + stringent_starvation_protein_A sspA QDM02971 507005 507502 + ClpXP_protease_specificity-enhancing_factor sspB QDM02972 507545 508912 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QDM02973 509292 510083 + transcriptional_regulator_NanR nanR QDM02974 510205 511098 + N-acetylneuraminate_lyase nanA QDM02975 511207 512697 + sialic_acid_transporter_NanT nanT QDM02976 512745 513434 + N-acetylmannosamine-6-phosphate_2-epimerase E3Z24_02470 QDM02977 513431 514306 + N-acetylmannosamine_kinase E3Z24_02475 QDM02978 514303 514767 + DUF386_domain-containing_protein E3Z24_02480 QDM02979 514827 515687 - DUF1016_domain-containing_protein E3Z24_02485 E3Z24_02490 515775 516514 + IS3_family_transposase no_locus_tag QDM02980 516507 516878 - hypothetical_protein E3Z24_02495 QDM06741 517187 518695 + group_II_intron_reverse_transcriptase/maturase ltrA E3Z24_02505 518785 519258 + IS3_family_transposase no_locus_tag E3Z24_02510 519301 519537 - DUF1016_domain-containing_protein no_locus_tag QDM02981 519722 520438 - DUF1120_domain-containing_protein E3Z24_02515 QDM02982 520435 520980 - hypothetical_protein E3Z24_02520 QDM02983 520977 523358 - fimbrial_biogenesis_outer_membrane_usher protein E3Z24_02525 QDM02984 523379 524053 - fimbria/pilus_periplasmic_chaperone E3Z24_02530 QDM02985 524225 524989 - DUF1120_domain-containing_protein E3Z24_02535 QDM02986 525549 526967 - glutamate_synthase E3Z24_02540 QDM06742 526980 531440 - glutamate_synthase_large_subunit gltB QDM02987 532115 533044 + TIGR01212_family_radical_SAM_protein E3Z24_02550 QDM02988 533140 535476 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 QDM02976 99 456 100.0 1e-160 PJR32598.1 QDM02975 99 990 100.0 0.0 PJR32599.1 QDM02974 100 611 100.0 0.0 PJR32600.1 QDM02973 99 536 100.0 0.0 >> 302. CP041284_0 Source: Escherichia coli strain 54 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: QIZ53797 510800 512245 + metalloprotease_TldD tldD QIZ53798 512379 513308 - HTH-type_transcriptional_activator_AaeR aaeR QIZ53799 513491 513694 + DUF1656_domain-containing_protein FK536_02490 QIZ53800 513702 514634 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QIZ53801 514640 516607 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIZ53802 516699 516971 + hypothetical_protein FK536_02505 QIZ53803 517027 517290 - peroxide/acid_stress_response_protein_YhcN yhcN QIZ53804 517655 518125 - transcriptional_regulator_ArgR argR QIZ53805 518560 519498 + malate_dehydrogenase mdh QIZ53806 519561 520628 - serine_endoprotease_DegS FK536_02525 QIZ53807 520718 522085 - serine_endoprotease_DegQ degQ QIZ53808 522239 522637 - DUF1043_family_protein FK536_02535 QIZ53809 522831 523958 + cell_division_protein_ZapE FK536_02540 QIZ53810 524177 524605 + 50S_ribosomal_protein_L13 rplM QIZ53811 524621 525013 + 30S_ribosomal_protein_S9 rpsI QIZ53812 525408 526046 + stringent_starvation_protein_A sspA QIZ53813 526052 526549 + ClpXP_protease_specificity-enhancing_factor sspB QIZ53814 526592 527959 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIZ53815 528339 529130 + transcriptional_regulator_NanR nanR QIZ53816 529252 530145 + N-acetylneuraminate_lyase nanA QIZ53817 530254 531744 + sialic_acid_transporter_NanT nanT QIZ53818 531792 532481 + N-acetylmannosamine-6-phosphate_2-epimerase FK536_02585 QIZ53819 532478 533353 + N-acetylmannosamine_kinase FK536_02590 QIZ53820 533350 533814 + DUF386_domain-containing_protein FK536_02595 QIZ53821 533874 534959 - DUF1016_domain-containing_protein FK536_02600 FK536_02605 535050 535747 + IS1_family_transposase no_locus_tag FK536_02610 535963 536163 - hypothetical_protein no_locus_tag QIZ53822 536211 537484 + IS3-like_element_IS2_family_transposase FK536_02615 FK536_02620 537497 538015 - DUF1120_domain-containing_protein no_locus_tag QIZ53823 538012 538557 - hypothetical_protein FK536_02625 QIZ53824 538554 540935 - fimbrial_biogenesis_outer_membrane_usher protein FK536_02630 QIZ53825 540956 541630 - fimbria/pilus_periplasmic_chaperone FK536_02635 QIZ53826 541802 542566 - DUF1120_domain-containing_protein FK536_02640 QIZ53827 543126 544544 - glutamate_synthase FK536_02645 QIZ57399 544557 549017 - glutamate_synthase_large_subunit gltB QIZ53828 549692 550621 + TIGR01212_family_radical_SAM_protein FK536_02655 QIZ53829 550717 553053 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 QIZ53818 99 456 100.0 1e-160 PJR32598.1 QIZ53817 99 990 100.0 0.0 PJR32599.1 QIZ53816 100 611 100.0 0.0 PJR32600.1 QIZ53815 99 536 100.0 0.0 >> 303. CP036177_0 Source: Escherichia coli strain WCHEC025970 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: QBF89840 491414 492859 + metalloprotease_TldD tldD QBF89841 492993 493922 - HTH-type_transcriptional_activator_AaeR aaeR QBF89842 494105 494308 + DUF1656_domain-containing_protein EYD11_02370 QBF89843 494316 495248 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QBF89844 495254 497221 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QBF89845 497313 497585 + hypothetical_protein EYD11_02385 QBF89846 497641 497904 - peroxide/acid_stress_response_protein_YhcN yhcN QBF89847 498269 498739 - transcriptional_regulator_ArgR argR QBF89848 499174 500112 + malate_dehydrogenase EYD11_02400 QBF89849 500175 501242 - serine_endoprotease_DegS degS QBF89850 501332 502699 - serine_endoprotease_DegQ degQ QBF89851 502853 503251 - DUF1043_family_protein EYD11_02415 QBF89852 503445 504572 + cell_division_protein_ZapE EYD11_02420 QBF89853 504791 505219 + 50S_ribosomal_protein_L13 EYD11_02425 QBF89854 505235 505627 + 30S_ribosomal_protein_S9 EYD11_02430 QBF89855 506022 506660 + stringent_starvation_protein_A EYD11_02435 QBF89856 506666 507163 + ClpXP_protease_specificity-enhancing_factor sspB QBF89857 507206 508573 - C4-dicarboxylate_transporter_DcuC dcuC QBF89858 508953 509744 + transcriptional_regulator_NanR nanR QBF89859 509866 510759 + N-acetylneuraminate_lyase nanA QBF89860 510868 512358 + sialic_acid_transporter_NanT nanT QBF89861 512406 513095 + N-acetylmannosamine-6-phosphate_2-epimerase EYD11_02465 QBF89862 513092 513967 + N-acetylmannosamine_kinase EYD11_02470 QBF89863 513964 514428 + YhcH/YjgK/YiaL_family_protein EYD11_02475 QBF93607 514488 515348 - DUF1016_family_protein EYD11_02480 EYD11_02485 515436 516175 + IS3_family_transposase no_locus_tag QBF89864 516168 516539 - hypothetical_protein EYD11_02490 QBF93608 516848 518356 + group_II_intron_reverse_transcriptase/maturase ltrA EYD11_02500 518446 518919 + IS3_family_transposase no_locus_tag EYD11_02505 518962 519198 - DUF1016_family_protein no_locus_tag QBF89865 519383 520099 - DUF1120_domain-containing_protein EYD11_02510 QBF89866 520096 520641 - hypothetical_protein EYD11_02515 QBF89867 520638 523019 - fimbrial_biogenesis_outer_membrane_usher protein EYD11_02520 QBF89868 523040 523714 - fimbrial_chaperone_protein EYD11_02525 QBF89869 523886 524650 - DUF1120_domain-containing_protein EYD11_02530 QBF89870 525210 526628 - glutamate_synthase EYD11_02535 QBF89871 526641 531101 - glutamate_synthase_large_subunit gltB QBF89872 531776 532705 + TIGR01212_family_radical_SAM_protein EYD11_02545 QBF89873 532801 535137 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 QBF89861 99 456 100.0 1e-160 PJR32598.1 QBF89860 99 990 100.0 0.0 PJR32599.1 QBF89859 100 611 100.0 0.0 PJR32600.1 QBF89858 99 536 100.0 0.0 >> 304. CP035350_0 Source: Escherichia coli strain BR32-DEC chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: QAU95456 1265715 1267160 + metalloprotease_TldD tldD QAU95457 1267294 1268223 - HTH-type_transcriptional_activator_AaeR aaeR QAU95458 1268406 1268609 + DUF1656_domain-containing_protein ETE46_06480 QAU95459 1268617 1269549 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QAU95460 1269555 1271522 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QAU95461 1271614 1271886 + hypothetical_protein ETE46_06495 QAU95462 1271942 1272205 - peroxide/acid_stress_response_protein_YhcN yhcN QAU95463 1272570 1273040 - transcriptional_regulator_ArgR argR QAU95464 1273475 1274413 + malate_dehydrogenase ETE46_06510 QAU95465 1274476 1275543 - serine_endoprotease_DegS degS QAU95466 1275633 1277000 - serine_endoprotease_DegQ degQ QAU95467 1277154 1277552 - DUF1043_family_protein ETE46_06525 QAU95468 1277746 1278873 + cell_division_protein_ZapE zapE QAU95469 1279092 1279520 + 50S_ribosomal_protein_L13 ETE46_06535 QAU95470 1279536 1279928 + 30S_ribosomal_protein_S9 ETE46_06540 QAU95471 1280323 1280961 + stringent_starvation_protein_A ETE46_06545 QAU95472 1280967 1281464 + ClpXP_protease_specificity-enhancing_factor sspB QAU95473 1281507 1282874 - C4-dicarboxylate_transporter_DcuC dcuC QAU95474 1283254 1284045 + transcriptional_regulator_NanR ETE46_06560 QAU95475 1284167 1285060 + N-acetylneuraminate_lyase nanA QAU95476 1285169 1286659 + MFS_transporter ETE46_06570 QAU95477 1286707 1287396 + N-acetylmannosamine-6-phosphate_2-epimerase ETE46_06575 QAU95478 1287393 1288268 + N-acetylmannosamine_kinase ETE46_06580 QAU95479 1288265 1288729 + YhcH/YjgK/YiaL_family_protein ETE46_06585 QAU98599 1288789 1289649 - DUF1016_family_protein ETE46_06590 QAU95480 1289737 1290087 + transposase ETE46_06595 ETE46_06600 1290113 1290797 + transposase no_locus_tag QAU95481 1290790 1291161 - hypothetical_protein ETE46_06605 ETE46_06610 1291470 1292039 + hypothetical_protein no_locus_tag QAU95482 1292082 1292279 - hypothetical_protein ETE46_06615 ETE46_06620 1292331 1293275 + hypothetical_protein no_locus_tag ETE46_06625 1293392 1293589 + IS3_family_transposase no_locus_tag ETE46_06630 1293590 1293955 + IS3_family_transposase no_locus_tag QAU98600 1293977 1294363 + IS3_family_transposase ETE46_06635 ETE46_06640 1294406 1294642 - DUF1016_family_protein no_locus_tag QAU95483 1294827 1295543 - DUF1120_domain-containing_protein ETE46_06645 QAU95484 1295540 1296085 - hypothetical_protein ETE46_06650 QAU95485 1296082 1298463 - fimbrial_biogenesis_outer_membrane_usher protein ETE46_06655 QAU95486 1298484 1299158 - fimbrial_chaperone_protein ETE46_06660 QAU95487 1299330 1300094 - DUF1120_domain-containing_protein ETE46_06665 QAU95488 1300653 1302071 - glutamate_synthase ETE46_06670 QAU95489 1302084 1306544 - glutamate_synthase_large_subunit gltB QAU95490 1307219 1308148 + TIGR01212_family_radical_SAM_protein ETE46_06680 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 QAU95477 99 456 100.0 1e-160 PJR32598.1 QAU95476 99 990 100.0 0.0 PJR32599.1 QAU95475 100 611 100.0 0.0 PJR32600.1 QAU95474 99 536 100.0 0.0 >> 305. CP032237_0 Source: Escherichia coli strain ECCWS199 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: AXZ71714 486112 487557 + metalloprotease_TldD tldD AXZ71715 487691 488620 - HTH-type_transcriptional_activator_AaeR aaeR AXZ71716 488803 489006 + protein_AaeX D3W53_02510 AXZ71717 489014 489946 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AXZ71718 489952 491919 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AXZ71719 492011 492283 + hypothetical_protein D3W53_02525 AXZ71720 492339 492602 - DUF1471_domain-containing_protein D3W53_02530 AXZ71721 492967 493437 - transcriptional_regulator_ArgR argR AXZ71722 493872 494810 + malate_dehydrogenase D3W53_02540 AXZ71723 494873 495940 - outer_membrane-stress_sensor_serine endopeptidase DegS D3W53_02545 AXZ71724 496030 497397 - periplasmic_pH-dependent_serine_endoprotease DegQ D3W53_02550 AXZ71725 497551 497949 - DUF1043_family_protein D3W53_02555 AXZ71726 498143 499270 + cell_division_protein_ZapE zapE AXZ71727 499489 499917 + 50S_ribosomal_protein_L13 D3W53_02565 AXZ71728 499933 500325 + 30S_ribosomal_protein_S9 D3W53_02570 AXZ75537 500569 500778 - hypothetical_protein D3W53_02575 AXZ71729 500720 501358 + stringent_starvation_protein_A D3W53_02580 AXZ71730 501364 501861 + stringent_starvation_protein_B D3W53_02585 AXZ71731 501903 503270 - C4-dicarboxylate_transporter_DcuC dcuC D3W53_02595 503270 503380 + transposase no_locus_tag AXZ71732 503650 504441 + transcriptional_regulator_NanR D3W53_02600 AXZ71733 504563 505456 + N-acetylneuraminate_lyase nanA AXZ71734 505566 507056 + MFS_transporter D3W53_02610 AXZ71735 507104 507793 + N-acetylmannosamine-6-phosphate_2-epimerase D3W53_02615 AXZ71736 507790 508665 + ROK_family_protein D3W53_02620 AXZ71737 508662 509126 + YhcH/YjgK/YiaL_family_protein D3W53_02625 AXZ71738 509186 509935 - DUF1016_family_protein D3W53_02630 D3W53_02635 509945 510642 - IS1_family_transposase no_locus_tag D3W53_02640 510599 510697 - glycosyltransferase no_locus_tag AXZ71739 510740 512158 - glutamate_synthase_small_subunit D3W53_02645 AXZ71740 512171 516631 - glutamate_synthase_subunit_alpha D3W53_02650 D3W53_02655 516554 516780 + hypothetical_protein no_locus_tag AXZ71741 516678 516914 + hypothetical_protein D3W53_02660 AXZ75538 517306 518235 + TIGR01212_family_radical_SAM_protein D3W53_02665 AXZ71742 518331 520667 + hybrid_sensor_histidine_kinase/response regulator D3W53_02670 AXZ71743 520897 521550 + glutamine_amidotransferase D3W53_02675 AXZ71744 521547 522275 + monofunctional_biosynthetic_peptidoglycan transglycosylase D3W53_02680 AXZ71745 522272 522904 - PhoP_regulatory_network_protein_YrbL yrbL AXZ71746 523118 523390 - phosphocarrier_protein_NPr D3W53_02690 AXZ71747 523387 524241 - RNase_adaptor_protein_RapZ D3W53_02695 AXZ71748 524287 524778 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN AXZ71749 524896 525183 - ribosome_hibernation_promoting_factor D3W53_02705 AXZ71750 525206 526639 - RNA_polymerase_sigma-54_factor D3W53_02710 AXZ71751 526687 527412 - ABC_transporter_ATP-binding_protein D3W53_02715 AXZ71752 527419 527976 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 AXZ71735 99 456 100.0 1e-160 PJR32598.1 AXZ71734 99 990 100.0 0.0 PJR32599.1 AXZ71733 100 611 100.0 0.0 PJR32600.1 AXZ71732 99 536 100.0 0.0 >> 306. CP025627_0 Source: Escherichia coli strain SCEC020007 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: AUN45994 491754 493199 + metalloprotease_TldD C0634_04035 AUN45995 493333 494262 - HTH-type_transcriptional_activator_AaeR C0634_04040 AUN45996 494445 494648 + protein_AaeX C0634_04045 AUN45997 494656 495588 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C0634_04050 AUN45998 495594 497561 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C0634_04055 AUN45999 497653 497925 + hypothetical_protein C0634_04060 AUN46000 497981 498244 - DUF1471_domain-containing_protein C0634_04065 AUN46001 498609 499079 - arginine_repressor C0634_04070 AUN46002 499514 500452 + malate_dehydrogenase C0634_04075 AUN46003 500515 501582 - outer_membrane-stress_sensor_serine endopeptidase DegS C0634_04080 AUN46004 501672 503039 - periplasmic_pH-dependent_serine_endoprotease DegQ C0634_04085 AUN46005 503193 503591 - hypothetical_protein C0634_04090 AUN46006 503785 504912 + cell_division_protein_ZapE C0634_04095 AUN46007 505131 505559 + 50S_ribosomal_protein_L13 C0634_04100 AUN46008 505575 505967 + 30S_ribosomal_protein_S9 C0634_04105 AUN49910 506211 506420 - hypothetical_protein C0634_04110 AUN46009 506362 507000 + stringent_starvation_protein_A C0634_04115 AUN46010 507006 507503 + stringent_starvation_protein_B C0634_04120 AUN46011 507546 508913 - C4-dicarboxylate_transporter C0634_04125 C0634_04130 508913 509023 + transposase no_locus_tag AUN46012 509293 510084 + transcriptional_regulator_NanR nanR AUN46013 510206 511099 + N-acetylneuraminate_lyase nanA AUN46014 511208 512698 + MFS_transporter C0634_04145 AUN46015 512746 513435 + N-acetylmannosamine-6-phosphate_2-epimerase C0634_04150 AUN46016 513432 514307 + N-acetylmannosamine_kinase C0634_04155 AUN46017 514304 514768 + YhcH/YjgK/YiaL_family_protein C0634_04160 AUN46018 514828 515688 - DUF1016_domain-containing_protein C0634_04165 C0634_04170 515776 516515 + IS3_family_transposase no_locus_tag AUN46019 516508 516879 - hypothetical_protein C0634_04175 AUN46020 517173 518696 + group_II_intron_reverse_transcriptase/maturase ltrA C0634_04185 518786 519259 + IS3_family_transposase no_locus_tag C0634_04190 519302 519538 - DUF1016_domain-containing_protein no_locus_tag AUN46021 519723 520439 - DUF1120_domain-containing_protein C0634_04195 AUN46022 520436 520981 - hypothetical_protein C0634_04200 AUN46023 520978 523359 - fimbrial_protein C0634_04205 AUN46024 523380 524054 - fimbrial_chaperone_protein C0634_04210 AUN46025 524226 524990 - glutamate_synthase_operon_protein_GltF C0634_04215 AUN46026 525111 525395 - hypothetical_protein C0634_04220 AUN46027 525550 526968 - glutamate_synthase C0634_04225 AUN46028 526981 531441 - glutamate_synthase_large_subunit C0634_04230 C0634_04235 531364 531590 + hypothetical_protein no_locus_tag AUN46029 531488 531724 + hypothetical_protein C0634_04240 AUN49911 532116 533045 + TIGR01212_family_radical_SAM_protein C0634_04245 AUN46030 533141 535477 + hybrid_sensor_histidine_kinase/response regulator C0634_04250 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 AUN46015 99 456 100.0 1e-160 PJR32598.1 AUN46014 99 990 100.0 0.0 PJR32599.1 AUN46013 100 611 100.0 0.0 PJR32600.1 AUN46012 99 536 100.0 0.0 >> 307. CP023371_0 Source: Escherichia coli strain 1283 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: ATB96435 510845 512290 + metalloprotease_TldD CNQ51_02655 ATB96436 512424 513353 - HTH-type_transcriptional_activator_AaeR CNQ51_02660 ATB96437 513536 513739 + protein_AaeX CNQ51_02665 ATB96438 513747 514679 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CNQ51_02670 ATB96439 514685 516652 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CNQ51_02675 ATB96440 516744 517016 + hypothetical_protein CNQ51_02680 ATB96441 517072 517335 - hypothetical_protein CNQ51_02685 ATB96442 517700 518170 - arginine_repressor CNQ51_02690 ATB96443 518605 519543 + malate_dehydrogenase CNQ51_02695 ATB96444 519606 520673 - outer_membrane-stress_sensor_serine endopeptidase DegS CNQ51_02700 ATB96445 520763 522130 - periplasmic_pH-dependent_serine_endoprotease DegQ CNQ51_02705 ATB96446 522284 522682 - hypothetical_protein CNQ51_02710 ATB96447 522876 524003 + cell_division_protein_ZapE CNQ51_02715 ATB96448 524222 524650 + 50S_ribosomal_protein_L13 CNQ51_02720 ATB96449 524666 525058 + 30S_ribosomal_protein_S9 CNQ51_02725 ATC00186 525302 525511 - hypothetical_protein CNQ51_02730 ATB96450 525453 526091 + stringent_starvation_protein_A CNQ51_02735 ATB96451 526097 526594 + stringent_starvation_protein_B CNQ51_02740 ATB96452 526637 528004 - C4-dicarboxylate_transporter CNQ51_02745 CNQ51_02750 528004 528114 + transposase no_locus_tag ATB96453 528384 529175 + transcriptional_regulator_NanR CNQ51_02755 ATB96454 529297 530190 + N-acetylneuraminate_lyase nanA ATB96455 530299 531789 + MFS_transporter CNQ51_02765 ATB96456 531837 532526 + N-acetylmannosamine-6-phosphate_2-epimerase CNQ51_02770 ATB96457 532523 533398 + N-acetylmannosamine_kinase CNQ51_02775 ATB96458 533395 533859 + YhcH/YjgK/YiaL_family_protein CNQ51_02780 ATB96459 533919 534437 - DUF1016_domain-containing_protein CNQ51_02785 ATB96460 534422 535695 - IS3_family_transposase CNQ51_02790 CNQ51_02795 535741 536382 - DUF1016_domain-containing_protein no_locus_tag ATB96461 536567 537283 - hypothetical_protein CNQ51_02800 CNQ51_02805 537280 537537 - hypothetical_protein no_locus_tag CNQ51_02810 537555 538252 - IS1_family_transposase no_locus_tag CNQ51_02815 538302 538601 - hypothetical_protein no_locus_tag ATB96462 538598 540979 - fimbrial_protein CNQ51_02820 ATB96463 541000 541674 - fimbrial_chaperone_protein CNQ51_02825 ATB96464 541846 542610 - glutamate_synthase_operon_protein_GltF CNQ51_02830 ATB96465 542731 543015 - hypothetical_protein CNQ51_02835 ATB96466 543170 544588 - glutamate_synthase CNQ51_02840 ATB96467 544601 549061 - glutamate_synthase_large_subunit CNQ51_02845 CNQ51_02850 548984 549210 + hypothetical_protein no_locus_tag ATB96468 549108 549344 + hypothetical_protein CNQ51_02855 ATC00187 549736 550665 + TIGR01212_family_radical_SAM_protein CNQ51_02860 ATB96469 550761 553097 + hybrid_sensor_histidine_kinase/response regulator CNQ51_02865 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 ATB96456 99 456 100.0 1e-160 PJR32598.1 ATB96455 99 990 100.0 0.0 PJR32599.1 ATB96454 100 611 100.0 0.0 PJR32600.1 ATB96453 99 536 100.0 0.0 >> 308. CP023201_0 Source: Escherichia coli strain 360/16 chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: ASZ47674 3392476 3393129 - glutamine_amidotransferase CLD29_17135 ASZ47675 3393359 3395695 - hybrid_sensor_histidine_kinase/response regulator CLD29_17140 ASZ48979 3395791 3396720 - TIGR01212_family_radical_SAM_protein CLD29_17145 ASZ47676 3397112 3397348 - hypothetical_protein CLD29_17150 CLD29_17155 3397246 3397472 - hypothetical_protein no_locus_tag ASZ47677 3397395 3401855 + glutamate_synthase_large_subunit CLD29_17160 ASZ47678 3401868 3403286 + glutamate_synthase CLD29_17165 ASZ47679 3403441 3403725 + hypothetical_protein CLD29_17170 ASZ47680 3403846 3404610 + glutamate_synthase_operon_protein_GltF CLD29_17175 ASZ47681 3404782 3405456 + fimbrial_chaperone_protein CLD29_17180 ASZ47682 3405477 3407858 + fimbrial_protein CLD29_17185 ASZ47683 3407855 3408400 + hypothetical_protein CLD29_17190 ASZ47684 3408397 3409113 + hypothetical_protein CLD29_17195 CLD29_17200 3409298 3409534 + DUF1016_domain-containing_protein no_locus_tag ASZ47685 3409807 3410667 + DUF1016_domain-containing_protein CLD29_17205 ASZ47686 3410727 3411191 - YhcH/YjgK/YiaL_family_protein CLD29_17210 ASZ47687 3411188 3412063 - N-acetylmannosamine_kinase CLD29_17215 ASZ47688 3412060 3412749 - N-acetylmannosamine-6-phosphate_2-epimerase CLD29_17220 ASZ47689 3412797 3414287 - MFS_transporter CLD29_17225 ASZ47690 3414396 3415289 - N-acetylneuraminate_lyase nanA ASZ47691 3415411 3416202 - transcriptional_regulator_NanR CLD29_17235 CLD29_17240 3416472 3416582 - transposase no_locus_tag ASZ47692 3416582 3417949 + C4-dicarboxylate_transporter CLD29_17245 ASZ47693 3417992 3418489 - stringent_starvation_protein_B CLD29_17250 ASZ47694 3418495 3419133 - stringent_starvation_protein_A CLD29_17255 ASZ47695 3419075 3419284 + hypothetical_protein CLD29_17260 ASZ47696 3419528 3419920 - 30S_ribosomal_protein_S9 CLD29_17265 ASZ47697 3419936 3420364 - 50S_ribosomal_protein_L13 CLD29_17270 ASZ47698 3420583 3421710 - cell_division_protein_ZapE CLD29_17275 ASZ47699 3421904 3422302 + hypothetical_protein CLD29_17280 ASZ47700 3422456 3423823 + periplasmic_pH-dependent_serine_endoprotease DegQ CLD29_17285 ASZ47701 3423913 3424980 + outer_membrane-stress_sensor_serine endopeptidase DegS CLD29_17290 ASZ47702 3425043 3425981 - malate_dehydrogenase CLD29_17295 ASZ47703 3426416 3426886 + arginine_repressor CLD29_17300 ASZ47704 3427251 3427514 + hypothetical_protein CLD29_17305 ASZ47705 3427570 3427842 - hypothetical_protein CLD29_17310 ASZ47706 3427934 3429901 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CLD29_17315 ASZ47707 3429907 3430839 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CLD29_17320 ASZ47708 3430847 3431050 - protein_AaeX CLD29_17325 ASZ47709 3431233 3432162 + HTH-type_transcriptional_activator_AaeR CLD29_17330 ASZ47710 3432296 3433741 - metalloprotease_TldD CLD29_17335 ASZ47711 3434171 3437971 - DUF3971_domain-containing_protein CLD29_17340 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 ASZ47688 99 456 100.0 1e-160 PJR32598.1 ASZ47689 99 990 100.0 0.0 PJR32599.1 ASZ47690 100 611 100.0 0.0 PJR32600.1 ASZ47691 99 536 100.0 0.0 >> 309. CP020514_0 Source: Escherichia coli strain 219 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: AVU54103 538249 539694 + metalloprotease_TldD A9P12_02855 AVU54104 539828 540757 - HTH-type_transcriptional_activator_AaeR A9P12_02860 AVU54105 540940 541143 + protein_AaeX A9P12_02865 AVU54106 541151 542083 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA A9P12_02870 AVU54107 542089 544056 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB A9P12_02875 AVU54108 544148 544420 + hypothetical_protein A9P12_02880 AVU54109 544476 544739 - hypothetical_protein A9P12_02885 AVU54110 545104 545574 - arginine_repressor A9P12_02890 AVU54111 546009 546947 + malate_dehydrogenase A9P12_02895 AVU54112 547010 548077 - outer_membrane-stress_sensor_serine endopeptidase DegS A9P12_02900 AVU54113 548167 549534 - periplasmic_pH-dependent_serine_endoprotease DegQ A9P12_02905 AVU54114 549688 550086 - hypothetical_protein A9P12_02910 AVU54115 550280 551407 + cell_division_protein_ZapE A9P12_02915 AVU54116 551626 552054 + 50S_ribosomal_protein_L13 A9P12_02920 AVU54117 552070 552462 + 30S_ribosomal_protein_S9 A9P12_02925 AVU58133 552706 552915 - hypothetical_protein A9P12_02930 AVU54118 552857 553495 + stringent_starvation_protein_A A9P12_02935 AVU54119 553501 553998 + stringent_starvation_protein_B A9P12_02940 A9P12_02945 554041 555407 - C4-dicarboxylate_transporter no_locus_tag A9P12_02950 555407 555517 + transposase no_locus_tag AVU54120 555787 556578 + transcriptional_regulator_NanR A9P12_02955 AVU54121 556700 557593 + N-acetylneuraminate_lyase nanA AVU54122 557702 559192 + MFS_transporter A9P12_02965 AVU54123 559240 559929 + N-acetylmannosamine-6-phosphate_2-epimerase A9P12_02970 AVU54124 559926 560801 + N-acetylmannosamine_kinase A9P12_02975 AVU54125 560798 561262 + YhcH/YjgK/YiaL_family_protein A9P12_02980 AVU54126 561322 562182 - DUF1016_domain-containing_protein A9P12_02985 A9P12_02990 562270 563009 + IS3_family_transposase no_locus_tag AVU54127 563002 563373 - hypothetical_protein A9P12_02995 AVU54128 563667 565190 + group_II_intron_reverse_transcriptase/maturase ltrA A9P12_03005 565280 565753 + IS3_family_transposase no_locus_tag A9P12_03010 565796 566032 - DUF1016_domain-containing_protein no_locus_tag AVU54129 566217 566933 - hypothetical_protein A9P12_03015 AVU54130 566930 567475 - hypothetical_protein A9P12_03020 AVU54131 567472 569853 - fimbrial_protein A9P12_03025 AVU54132 569874 570548 - fimbrial_chaperone_protein A9P12_03030 AVU54133 570720 571484 - glutamate_synthase_operon_protein_GltF A9P12_03035 AVU54134 571605 571889 - hypothetical_protein A9P12_03040 AVU54135 572044 573462 - glutamate_synthase A9P12_03045 AVU54136 573475 577935 - glutamate_synthase_large_subunit A9P12_03050 A9P12_03055 577858 578084 + hypothetical_protein no_locus_tag AVU54137 577982 578218 + hypothetical_protein A9P12_03060 AVU58134 578610 579539 + TIGR01212_family_radical_SAM_protein A9P12_03065 AVU54138 579635 581971 + hybrid_sensor_histidine_kinase/response regulator A9P12_03070 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 AVU54123 99 456 100.0 1e-160 PJR32598.1 AVU54122 99 990 100.0 0.0 PJR32599.1 AVU54121 100 611 100.0 0.0 PJR32600.1 AVU54120 99 536 100.0 0.0 >> 310. CP011061_0 Source: Escherichia coli str. Sanji, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: AMU85196 3497671 3498600 - hypothetical_protein Y979_17245 AMU85197 3499275 3503735 + glutamate_synthase gltB AMU83791 3503748 3505166 + glutamate_synthase Y979_17255 AMU83792 3505726 3506490 + gltF Y979_17260 AMU83793 3506662 3507336 + fimbrial_chaperone_protein Y979_17265 AMU83794 3507357 3509738 + fimbrial_protein Y979_17270 AMU83795 3509735 3510280 + hypothetical_protein Y979_17275 AMU83796 3510277 3510993 + hypothetical_protein Y979_17280 AMU83797 3511178 3511417 + hypothetical_protein Y979_17285 AMU83798 3511457 3511843 - transposase Y979_17290 AMU85198 3512020 3513528 - reverse_transcriptase Y979_17295 AMU83799 3514135 3514614 - transposase Y979_17300 AMU85199 3514614 3514940 - transposase Y979_17305 AMU83800 3515948 3516412 - hypothetical_protein Y979_17315 AMU83801 3516409 3517284 - N-acetylmannosamine_kinase Y979_17320 AMU83802 3517281 3517970 - N-acetylmannosamine-6-phosphate_2-epimerase Y979_17325 AMU83803 3518018 3519508 - sialic_acid_transporter Y979_17330 AMU83804 3519617 3520510 - N-acetylneuraminate_lyase Y979_17335 AMU83805 3520632 3521423 - transcriptional_regulator_NanR Y979_17340 AMU83806 3521803 3523170 + C4-dicarboxylate_transporter Y979_17345 AMU83807 3523213 3523710 - Clp_protease_ClpP Y979_17350 AMU83808 3523716 3524354 - stringent_starvation_protein_A sspA AMU83809 3524749 3525141 - 30S_ribosomal_protein_S9 Y979_17360 AMU83810 3525157 3525585 - 50S_ribosomal_protein_L13 Y979_17365 AMU83811 3525804 3526931 - hypothetical_protein Y979_17370 AMU83812 3527125 3527523 + hypothetical_protein Y979_17375 AMU83813 3527677 3529044 + serine_endoprotease_DegQ Y979_17380 AMU83814 3529134 3530201 + serine_endoprotease Y979_17385 AMU83815 3530264 3531202 - malate_dehydrogenase Y979_17390 AMU83816 3531637 3532107 + arginine_repressor Y979_17395 AMU83817 3532472 3532735 + membrane_protein Y979_17400 AMU83818 3532791 3533063 - hypothetical_protein Y979_17405 AMU83819 3533155 3535122 - p-hydroxybenzoic_acid_efflux_subunit_AaeB Y979_17410 AMU83820 3535128 3536060 - p-hydroxybenzoic_acid_efflux_subunit_AaeA Y979_17415 AMU85200 3536068 3536271 - transporter Y979_17420 AMU83821 3537517 3538962 - protease_TldD tldD AMU83822 3539392 3543192 - hypothetical_protein Y979_17435 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 AMU83802 99 456 100.0 1e-160 PJR32598.1 AMU83803 99 990 100.0 0.0 PJR32599.1 AMU83804 100 611 100.0 0.0 PJR32600.1 AMU83805 99 536 100.0 0.0 >> 311. CP010172_0 Source: Escherichia coli strain H8, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2593 Table of genes, locations, strands and annotations of subject cluster: APK75059 1629763 1631208 + protease_TldD tldD APK75060 1631342 1632271 - transcriptional_regulator RG50_07980 APK78081 1632454 1632657 + transporter RG50_07985 APK75061 1632665 1633597 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG50_07990 APK75062 1633603 1635570 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG50_07995 APK75063 1635662 1635934 + hypothetical_protein RG50_08000 APK75064 1635990 1636253 - membrane_protein RG50_08005 APK75065 1636618 1637088 - arginine_repressor RG50_08010 APK75066 1637523 1638461 + malate_dehydrogenase RG50_08015 APK75067 1638524 1639591 - serine_endoprotease RG50_08020 APK75068 1639681 1641048 - serine_endoprotease_DegQ RG50_08025 APK75069 1641202 1641600 - hypothetical_protein RG50_08030 APK75070 1641794 1642921 + hypothetical_protein RG50_08035 APK75071 1643140 1643568 + 50S_ribosomal_protein_L13 RG50_08040 APK75072 1643584 1643976 + 30S_ribosomal_protein_S9 RG50_08045 APK75073 1644371 1645009 + stringent_starvation_protein_A sspA APK75074 1645015 1645512 + Clp_protease_ClpP RG50_08055 APK75075 1645555 1646922 - C4-dicarboxylate_transporter RG50_08060 APK75076 1647302 1648093 + transcriptional_regulator_NanR RG50_08065 APK75077 1648215 1649108 + N-acetylneuraminate_lyase RG50_08070 APK75078 1649217 1650707 + sialic_acid_transporter RG50_08075 APK75079 1650755 1651444 + N-acetylmannosamine-6-phosphate_2-epimerase RG50_08080 APK75080 1651441 1652316 + N-acetylmannosamine_kinase RG50_08085 APK75081 1652313 1652777 + hypothetical_protein RG50_08090 APK75082 1653785 1654111 + transposase RG50_08100 APK75083 1654111 1654998 + transposase RG50_08105 APK75084 1654964 1655218 + hypothetical_protein RG50_08110 APK75085 1655462 1656178 - hypothetical_protein RG50_08115 APK75086 1656175 1656720 - hypothetical_protein RG50_08120 APK75087 1656717 1659098 - fimbrial_protein RG50_08125 APK75088 1659119 1659793 - fimbrial_chaperone_protein RG50_08130 APK75089 1659965 1660729 - gltF RG50_08135 APK75090 1661289 1662707 - glutamate_synthase RG50_08140 APK78082 1662720 1667180 - glutamate_synthase gltB APK78083 1667855 1668784 + hypothetical_protein RG50_08150 APK75091 1668880 1671216 + aerobic_respiration_control_sensor_protein_ArcB RG50_08155 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 APK75079 99 456 100.0 1e-160 PJR32598.1 APK75078 99 990 100.0 0.0 PJR32599.1 APK75077 100 611 100.0 0.0 PJR32600.1 APK75076 99 536 100.0 0.0 >> 312. CP012693_0 Source: Escherichia coli strain FORC_028, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2566 Table of genes, locations, strands and annotations of subject cluster: AOM43555 552503 553948 + protease_TldD FORC28_0563 AOM43556 554076 554987 - LysR_family_transcriptional_regulator_QseA FORC28_0564 AOM43557 555119 555391 + putative_membrane_protein FORC28_0565 AOM43558 555399 556331 + Tripartite_multidrug_resistance_system,_membrane fusion component FORC28_0566 AOM43559 556337 558304 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB FORC28_0567 AOM43560 558396 558668 + putative_ribonuclease_inhibitor FORC28_0568 AOM43561 558724 558987 - membrane_protein FORC28_0569 AOM43562 559352 559822 - Arginine_pathway_regulatory_protein_ArgR FORC28_0570 AOM43563 560257 561195 + Malate_dehydrogenase FORC28_0571 AOM43564 561258 562325 - Outer_membrane_stress_sensor_protease_DegS FORC28_0572 AOM43565 562415 563782 - Outer_membrane_stress_sensor_protease_DegQ, serine protease FORC28_0573 AOM43566 563936 564334 - Putative_cytochrome_d_ubiquinol_oxidase_subunit III FORC28_0574 AOM43567 564528 565655 + ATPase,_AFG1_family FORC28_0575 AOM43568 565874 566302 + LSU_ribosomal_protein_L13p FORC28_0576 AOM43569 566318 566710 + SSU_ribosomal_protein_S9p FORC28_0577 AOM43570 567105 567743 + Stringent_starvation_protein_A FORC28_0578 AOM43571 567749 568246 + Stringent_starvation_protein_B FORC28_0579 AOM43572 568289 569656 - Putative_cryptic_C4-dicarboxylate_transporter DcuD FORC28_0580 AOM43573 570045 570827 + Transcriptional_regulator_NanR FORC28_0581 AOM43574 570949 571842 + N-acetylneuraminate_lyase FORC28_0582 AOM43575 571952 573442 + Sialic_acid_transporter_NanT FORC28_0583 AOM43576 573490 574179 + N-acetylmannosamine-6-phosphate_2-epimerase FORC28_0584 AOM43577 574176 575051 + N-acetylmannosamine_kinase FORC28_0585 AOM43578 575048 575512 + Putative_sugar_isomerase FORC28_0586 AOM43579 575572 576120 - Putative_uncharacterized_protein_YhcG FORC28_0587 AOM43580 576248 576619 - Putative_uncharacterized_protein_YhcG FORC28_0588 AOM43581 576803 578221 - Glutamate_synthase_[NADPH]_small_chain FORC28_0589 AOM43582 578234 582787 - Glutamate_synthase_[NADPH]_large_chain FORC28_0590 AOM43583 583219 583323 + hypothetical_protein FORC28_0591 AOM43584 583369 584298 + putative_Fe-S_oxidoreductase FORC28_0592 AOM43585 584394 586730 + Aerobic_respiration_control_sensor_protein_arcB FORC28_0593 AOM43586 586960 587613 + Sigma_cross-reacting_protein_27A FORC28_0594 AOM43587 587610 588338 + biosynthetic_peptidoglycan_transglycosylase FORC28_0595 AOM43588 588335 588967 - Putative_uncharacterized_protein_YrbL FORC28_0596 AOM43589 589181 589453 - Phosphocarrier_protein FORC28_0597 AOM43590 589450 590304 - putative_ATP-binding_protein FORC28_0598 AOM43591 590350 590841 - PTS_system_nitrogen-specific_IIA_component, PtsN FORC28_0599 AOM43592 590959 591246 - Ribosome_hibernation_protein_YhbH FORC28_0600 AOM43593 591269 592702 - RNA_polymerase_sigma-54_factor_RpoN FORC28_0601 AOM43594 592750 593475 - Lipopolysaccharide_ABC_transporter,_ATP-binding protein LptB FORC28_0602 AOM43595 593482 594039 - LPS_ABC_transporter_substrate-binding_protein LptA FORC28_0603 AOM43596 594008 594583 - Uncharacterized_protein_YrbK FORC28_0604 AOM43597 594580 595146 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase FORC28_0605 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AOM43577 97 509 100.0 1e-179 PJR32597.1 AOM43576 99 456 100.0 1e-160 PJR32598.1 AOM43575 99 990 100.0 0.0 PJR32599.1 AOM43574 100 611 100.0 0.0 >> 313. AP021896_0 Source: Escherichia coli 2018.02.02CC DNA, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2564 Table of genes, locations, strands and annotations of subject cluster: BBP39198 2307766 2308419 - glyoxalase elbB BBP39199 2308649 2310985 - aerobic_respiration_control_sensor_protein_ArcB arcB BBP39200 2311036 2312043 - TIGR01212_family_radical_SAM_protein yhcC BBP39201 2312577 2317145 + glutamate_synthase gltB BBP39202 2317158 2318576 + glutamate_synthase_[NADPH]_small_chain gltD BBP39203 2318554 2318739 - hypothetical_protein VEGS05_22070 BBP39204 2319136 2319900 + protein_GltF gltF BBP39205 2320072 2320746 + putative_fimbrial_chaperone_YhcA yhcA BBP39206 2320931 2323147 + putative_outer_membrane_usher_protein_YhcD yhcD BBP39207 2323144 2323689 + hypothetical_protein yhcE BBP39208 2323686 2324297 + hypothetical_protein VEGS05_22120 BBP39209 2324566 2324904 + hypothetical_protein VEGS05_22130 BBP39210 2325000 2325365 - IS2_repressor_TnpA VEGS05_22140 BBP39211 2325376 2325738 + hypothetical_protein VEGS05_22150 BBP39212 2326502 2327050 + hypothetical_protein VEGS05_22160 BBP39213 2327110 2327574 - hypothetical_protein yhcH BBP39214 2327571 2328446 - N-acetylmannosamine_kinase nanK BBP39215 2328443 2329132 - putative_N-acetylmannosamine-6-phosphate 2-epimerase nanE BBP39216 2329180 2330670 - putative_sialic_acid_transporter nanT BBP39217 2330779 2331672 - N-acetylneuraminate_lyase nanA BBP39218 2331794 2332576 - transcriptional_regulator_NanR nanR BBP39219 2332965 2334332 + putative_cryptic_C4-dicarboxylate_transporter DcuD dcuD BBP39220 2334375 2334872 - stringent_starvation_protein_B sspB BBP39221 2334878 2335516 - stringent_starvation_protein_A sspA BBP39222 2335911 2336303 - 30S_ribosomal_protein_S9 rpsI BBP39223 2336319 2336747 - 50S_ribosomal_protein_L13 rplM BBP39224 2336966 2337937 - cell_division_protein_ZapE zapE BBP39225 2338287 2338685 + putative_cytochrome_d_ubiquinol_oxidase_subunit 3 yhcB BBP39226 2338839 2340206 + periplasmic_pH-dependent_serine_endoprotease DegQ degQ BBP39227 2340296 2341363 + serine_endoprotease_DegS degS BBP39228 2341426 2342364 - malate_dehydrogenase mdh BBP39229 2342799 2343269 + arginine_repressor argR BBP39230 2343583 2343897 + hypothetical_protein VEGS05_22340 BBP39231 2343953 2344225 - hypothetical_protein yhcO BBP39232 2344317 2346284 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB BBP39233 2346290 2347222 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA BBP39234 2347616 2348545 + HTH-type_transcriptional_activator_AaeR aaeR BBP39235 2348679 2350124 - metalloprotease_TldD tldD BBP39236 2350554 2354354 - hypothetical_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 BBP39214 97 507 100.0 1e-178 PJR32597.1 BBP39215 99 456 100.0 1e-160 PJR32598.1 BBP39216 99 990 100.0 0.0 PJR32599.1 BBP39217 100 611 100.0 0.0 >> 314. AP021893_0 Source: Escherichia coli 2018-06-4CC DNA, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2564 Table of genes, locations, strands and annotations of subject cluster: BBP24329 501802 503247 + metalloprotease_TldD tldD BBP24330 503381 504310 - HTH-type_transcriptional_activator_AaeR aaeR BBP24331 504424 504696 + efflux_system_membrane_protein VEGS07_04690 BBP24332 504704 505636 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA BBP24333 505642 507609 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB BBP24334 507701 507973 + hypothetical_protein yhcO BBP24335 508029 508343 - membrane_protein VEGS07_04730 BBP24336 508657 509127 - arginine_repressor argR BBP24337 509562 510500 + malate_dehydrogenase mdh BBP24338 510563 511630 - serine_endoprotease_DegS degS BBP24339 511720 513087 - periplasmic_pH-dependent_serine_endoprotease DegQ degQ BBP24340 513241 513639 - putative_cytochrome_d_ubiquinol_oxidase_subunit 3 yhcB BBP24341 513989 514960 + cell_division_protein_ZapE zapE BBP24342 515179 515607 + 50S_ribosomal_protein_L13 rplM BBP24343 515623 516015 + 30S_ribosomal_protein_S9 rpsI BBP24344 516410 517048 + stringent_starvation_protein_A sspA BBP24345 517054 517551 + stringent_starvation_protein_B sspB BBP24346 517594 518961 - putative_cryptic_C4-dicarboxylate_transporter DcuD dcuD BBP24347 519350 520132 + transcriptional_regulator_NanR nanR BBP24348 520254 521147 + N-acetylneuraminate_lyase nanA BBP24349 521257 522747 + putative_sialic_acid_transporter nanT BBP24350 522795 523484 + putative_N-acetylmannosamine-6-phosphate 2-epimerase nanE BBP24351 523481 524356 + N-acetylmannosamine_kinase nanK BBP24352 524353 524817 + hypothetical_protein yhcH BBP24353 524877 525425 - hypothetical_protein VEGS07_04910 BBP24354 526189 526905 - hypothetical_protein yhcF BBP24355 526902 527447 - hypothetical_protein yhcE BBP24356 527444 529825 - putative_outer_membrane_usher_protein_YhcD yhcD BBP24357 529846 530520 - putative_fimbrial_chaperone_YhcA yhcA BBP24358 530692 531456 - protein_GltF gltF BBP24359 532016 533434 - glutamate_synthase_[NADPH]_small_chain gltD BBP24360 533447 538015 - glutamate_synthase gltB BBP24361 538549 539511 + protein_YhcC yhcC BBP24362 539607 541943 + aerobic_respiration_control_sensor_protein_ArcB arcB_1 BBP24363 542173 542826 + glyoxalase elbB BBP24364 542823 543551 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA BBP24365 543548 544180 - hypothetical_protein yrbL Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 BBP24351 97 507 100.0 1e-178 PJR32597.1 BBP24350 99 456 100.0 1e-160 PJR32598.1 BBP24349 99 990 100.0 0.0 PJR32599.1 BBP24348 100 611 100.0 0.0 >> 315. CP006262_0 Source: Escherichia coli O145:H28 str. RM13516, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2052 Table of genes, locations, strands and annotations of subject cluster: AHG16585 3920929 3921915 + Arabinose_5-phosphate_isomerase yrbH AHG16586 3921936 3922502 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase yrbI AHG16587 3922499 3923074 + Uncharacterized_protein_YrbK_clustered_with lipopolysaccharide transporters yrbK AHG16588 3923043 3923600 + LptA,_protein_essential_for_LPS_transport_across the periplasm ECRM13516_3963 AHG16589 3923607 3924332 + Lipopolysaccharide_ABC_transporter,_ATP-binding protein LptB yhbG AHG16590 3924380 3925813 + RNA_polymerase_sigma-54_factor_RpoN rpoN AHG16591 3925836 3926123 + Ribosome_hibernation_protein_YhbH yhbH AHG16592 3926241 3926732 + PTS_IIA-like_nitrogen-regulatory_protein_PtsN ptsN AHG16593 3926778 3927632 + putative_P-loop-containing_kinase yhbJ AHG16594 3927629 3927901 + Phosphocarrier_protein,_nitrogen_regulation associated ptsO AHG16595 3928114 3928746 + Putative_uncharacterized_protein_YrbL yrbL AHG16596 3928743 3929471 - Monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AHG16597 3929468 3930121 - Sigma_cross-reacting_protein_27A yhbL AHG16598 3930351 3932687 - Aerobic_respiration_control_sensor_protein_arcB arcB AHG16599 3932783 3933712 - putative_Fe-S_oxidoreductase yhcC AHG16600 3934294 3938847 + Glutamate_synthase_[NADPH]_large_chain gltB AHG16601 3938860 3940278 + Glutamate_synthase_[NADPH]_small_chain gltD AHG16602 3940462 3941511 + Putative_cytoplasmic_protein yhcG AHG16603 3941571 3942035 - Putative_sugar_isomerase_involved_in_processing of exogenous sialic acid yhcH AHG16604 3942032 3942907 - N-acetylmannosamine_kinase yhcI AHG16605 3942904 3943593 - N-acetylmannosamine-6-phosphate_2-epimerase yhcJ AHG16606 3943641 3945131 - Sialic_acid_transporter_(permease)_NanT nanT AHG16607 3945240 3946133 - N-acetylneuraminate_lyase nanA AHG16608 3946255 3947037 - Transcriptional_regulator_NanR nanR AHG16609 3947417 3948784 + Putative_cryptic_C4-dicarboxylate_transporter DcuD ECRM13516_3984 AHG16610 3948826 3949323 - ClpXP_protease_specificity-enhancing_factor_/ Stringent starvation protein B sspB AHG16611 3949329 3949967 - Stringent_starvation_protein_A sspA AHG16612 3950362 3950754 - SSU_ribosomal_protein_S9p_(S16e) rpsI AHG16613 3950770 3951198 - LSU_ribosomal_protein_L13p_(L13Ae) rplM AHG16614 3951417 3952544 - ATPase,_AFG1_family yhcM AHG16615 3952738 3953136 + Putative_cytochrome_d_ubiquinol_oxidase_subunit III (Cytochrome bd-I oxidase subunit III) yhcB AHG16616 3953290 3954657 + Outer_membrane_stress_sensor_protease_DegQ, serine protease degQ AHG16617 3954747 3955814 + Outer_membrane_stress_sensor_protease_DegS degS AHG16618 3955877 3956815 - Malate_dehydrogenase mdh AHG16619 3957250 3957720 + Arginine_pathway_regulatory_protein_ArgR, repressor of arg regulon argR AHG16620 3958085 3958348 + putative_exported_protein yhcN AHG16621 3958404 3958676 - putative_ribonuclease_inhibitor yhcO AHG16622 3958768 3960735 - Fusaric_acid_resistance_protein_FusB/Fusaric acid resistance protein FusC yhcP AHG16623 3960741 3961673 - Fusaric_acid_resistance_protein_fusE yhcQ AHG16624 3961681 3961953 - putative_membrane_protein yhcR AHG16625 3962085 3962996 + Putative_transcriptional_regulator_LYSR-type qseA AHG16626 3963124 3964569 - TldD_protein,_part_of_proposed_TldE/TldD proteolytic complex tldD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AHG16602 98 712 100.0 0.0 PJR32595.1 AHG16603 100 318 100.0 6e-109 PJR32596.1 AHG16604 98 561 100.0 0.0 PJR32597.1 AHG16605 100 461 100.0 2e-162 >> 316. CP028379_0 Source: Escherichia coli O145 str. RM9872 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2037 Table of genes, locations, strands and annotations of subject cluster: AWN79669 3924118 3925104 + arabinose_5-phosphate_isomerase_KdsD I3Y_20775 AWN79670 3925125 3925691 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC AWN79671 3925688 3926263 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AWN79672 3926232 3926789 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA I3Y_20790 AWN79673 3926796 3927521 + ABC_transporter_ATP-binding_protein I3Y_20795 AWN79674 3927569 3929002 + RNA_polymerase_factor_sigma-54 I3Y_20800 AWN79675 3929025 3929312 + ribosome_hibernation_promoting_factor I3Y_20805 AWN79676 3929430 3929921 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN I3Y_20810 AWN79677 3929967 3930821 + RNase_adaptor_protein_RapZ I3Y_20815 AWN79678 3930818 3931090 + phosphocarrier_protein_NPr I3Y_20820 AWN79679 3931303 3931935 + protein_YrbL yrbL AWN79680 3931932 3932660 - monofunctional_biosynthetic_peptidoglycan transglycosylase I3Y_20830 AWN79681 3932657 3933310 - glutamine_amidotransferase I3Y_20835 AWN79682 3933540 3935876 - hybrid_sensor_histidine_kinase/response regulator I3Y_20840 AWN81179 3935972 3936901 - TIGR01212_family_radical_SAM_protein I3Y_20845 AWN79683 3937293 3937529 - hypothetical_protein I3Y_20850 I3Y_20855 3937427 3937653 - hypothetical_protein no_locus_tag AWN79684 3937576 3942036 + glutamate_synthase_large_subunit I3Y_20860 AWN79685 3942049 3943467 + glutamate_synthase_small_subunit I3Y_20865 AWN79686 3943651 3944778 + DUF1016_domain-containing_protein I3Y_20870 AWN79687 3944838 3945302 - YhcH/YjgK/YiaL_family_protein I3Y_20875 AWN79688 3945299 3946174 - N-acetylmannosamine_kinase I3Y_20880 AWN79689 3946171 3946860 - N-acetylmannosamine-6-phosphate_2-epimerase I3Y_20885 AWN79690 3946908 3948398 - MFS_transporter I3Y_20890 AWN79691 3948507 3949400 - N-acetylneuraminate_lyase nanA AWN79692 3949522 3950313 - transcriptional_regulator_NanR nanR I3Y_20905 3950574 3950684 - transposase no_locus_tag AWN79693 3950684 3952051 + C4-dicarboxylate_transporter I3Y_20910 AWN79694 3952093 3952590 - stringent_starvation_protein_B I3Y_20915 AWN79695 3952596 3953234 - stringent_starvation_protein_A I3Y_20920 AWN79696 3953176 3953385 + hypothetical_protein I3Y_20925 AWN79697 3953490 3953711 + hypothetical_protein I3Y_20930 AWN79698 3953629 3954021 - 30S_ribosomal_protein_S9 I3Y_20935 AWN79699 3954037 3954465 - 50S_ribosomal_protein_L13 I3Y_20940 AWN79700 3954684 3955811 - cell_division_protein_ZapE I3Y_20945 AWN79701 3956005 3956403 + hypothetical_protein I3Y_20950 AWN79702 3956557 3957924 + periplasmic_pH-dependent_serine_endoprotease DegQ I3Y_20955 AWN79703 3958014 3959081 + outer_membrane-stress_sensor_serine endopeptidase DegS I3Y_20960 AWN79704 3959144 3960082 - malate_dehydrogenase I3Y_20965 AWN79705 3960517 3960987 + arginine_repressor I3Y_20970 AWN79706 3961352 3961615 + DUF1471_domain-containing_protein I3Y_20975 I3Y_20980 3961671 3961924 - hypothetical_protein no_locus_tag AWN79707 3962016 3963983 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB I3Y_20985 AWN79708 3963989 3964921 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA I3Y_20990 AWN79709 3964929 3965132 - protein_AaeX I3Y_20995 AWN79710 3965315 3966244 + HTH-type_transcriptional_activator_AaeR I3Y_21000 AWN79711 3966372 3967817 - metalloprotease_TldD I3Y_21005 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AWN79686 91 698 107.449856734 0.0 PJR32595.1 AWN79687 100 318 100.0 6e-109 PJR32596.1 AWN79688 98 561 100.0 0.0 PJR32597.1 AWN79689 100 461 100.0 2e-162 >> 317. CP006027_0 Source: Escherichia coli O145:H28 str. RM13514, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 2037 Table of genes, locations, strands and annotations of subject cluster: AHG10812 4052607 4053593 + Arabinose_5-phosphate_isomerase yrbH AHG10813 4053614 4054180 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase yrbI AHG10814 4054177 4054752 + Uncharacterized_protein_YrbK yrbK AHG10815 4054721 4055278 + lipopolysaccharide_transport_periplasmic_protein LptA yhbN AHG10816 4055285 4056010 + Lipopolysaccharide_ABC_transporter,_ATP-binding protein LptB yhbG AHG10817 4056058 4057491 + RNA_polymerase_sigma-54_factor_RpoN rpoN AHG10818 4057514 4057801 + Ribosome_hibernation_protein_YhbH yhbH AHG10819 4057919 4058410 + PTS_IIA-like_nitrogen-regulatory_protein_PtsN ptsN AHG10820 4058456 4059310 + putative_P-loop-containing_kinase yhbJ AHG10821 4059307 4059579 + Phosphocarrier_protein,_nitrogen_regulation associated ptsO AHG10822 4059792 4060424 + Putative_uncharacterized_protein_YrbL yrbL AHG10823 4060421 4061149 - Monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AHG10824 4061146 4061799 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL AHG10825 4062029 4064365 - Aerobic_respiration_control_sensor_protein_arcB arcB AHG10826 4064461 4065390 - putative_Fe-S_oxidoreductase yhcC AHG10827 4065972 4070525 + Glutamate_synthase_[NADPH]_large_chain gltB AHG10828 4070538 4071956 + Glutamate_synthase_[NADPH]_small_chain gltD AHG10829 4072140 4073267 + Putative_cytoplasmic_protein yhcG AHG10830 4073327 4073791 - Putative_sugar_isomerase_involved_in_processing of exogenous sialic acid yhcH AHG10831 4073788 4074663 - N-acetylmannosamine_kinase yhcI AHG10832 4074660 4075349 - N-acetylmannosamine-6-phosphate_2-epimerase yhcJ AHG10833 4075397 4076887 - Sialic_acid_transporter_(permease)_NanT nanT AHG10834 4076996 4077889 - N-acetylneuraminate_lyase nanA AHG10835 4078011 4078793 - Transcriptional_regulator_NanR nanR AHG10836 4079173 4080540 + Putative_cryptic_C4-dicarboxylate_transporter DcuD dcuD AHG10837 4080582 4081079 - ClpXP_protease_specificity-enhancing_factor_/ Stringent starvation protein B sspB AHG10838 4081085 4081723 - Stringent_starvation_protein_A sspA AHG10839 4082118 4082510 - SSU_ribosomal_protein_S9p_(S16e) rpsI AHG10840 4082526 4082954 - LSU_ribosomal_protein_L13p_(L13Ae) rplM AHG10841 4083173 4084300 - ATPase,_AFG1_family yhcM AHG10842 4084494 4084892 + Putative_cytochrome_d_ubiquinol_oxidase_subunit III (Cytochrome bd-I oxidase subunit III) yhcB AHG10843 4085046 4086413 + Outer_membrane_stress_sensor_protease_DegQ, serine protease degQ AHG10844 4086503 4087570 + Outer_membrane_stress_sensor_protease_DegS degS AHG10845 4087633 4088571 - Malate_dehydrogenase mdh AHG10846 4089006 4089476 + Arginine_pathway_regulatory_protein_ArgR, repressor of arg regulon argR AHG10847 4089841 4090104 + putative_exported_protein yhcN AHG10848 4090160 4090432 - putative_ribonuclease_inhibitor yhcO AHG10849 4090524 4092491 - Fusaric_acid_resistance_protein_FusB/Fusaric acid resistance protein FusC yhcP AHG10850 4092497 4093429 - Fusaric_acid_resistance_protein_fusE yhcQ AHG10851 4093437 4093709 - putative_membrane_protein yhcR AHG10852 4093841 4094752 + Putative_transcriptional_regulator_LYSR-type qseA AHG10853 4094880 4096325 - TldD_protein,_part_of_proposed_TldE/TldD proteolytic complex tldD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AHG10829 91 698 107.449856734 0.0 PJR32595.1 AHG10830 100 318 100.0 6e-109 PJR32596.1 AHG10831 98 561 100.0 0.0 PJR32597.1 AHG10832 100 461 100.0 2e-162 >> 318. CP024147_0 Source: Escherichia coli strain 14EC033 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 1981 Table of genes, locations, strands and annotations of subject cluster: AUJ97640 4120593 4121579 + arabinose-5-phosphate_isomerase_KdsD CR539_21280 AUJ97641 4121600 4122166 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC CR539_21285 AUJ97642 4122163 4122738 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AUJ97643 4122707 4123264 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA CR539_21295 AUJ97644 4123271 4123996 + ABC_transporter_ATP-binding_protein lptB AUJ97645 4124044 4125477 + RNA_polymerase_sigma-54_factor CR539_21305 AUJ97646 4125500 4125787 + ribosome_hibernation_promoting_factor CR539_21310 AUJ97647 4125905 4126396 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN CR539_21315 AUJ97648 4126442 4127296 + RNase_adaptor_protein_RapZ CR539_21320 AUJ97649 4127293 4127565 + phosphocarrier_protein_NPr CR539_21325 AUJ97650 4127778 4128410 + protein_YrbL CR539_21330 AUJ97651 4128407 4129135 - monofunctional_biosynthetic_peptidoglycan transglycosylase CR539_21335 AUJ97652 4129132 4129785 - isoprenoid_biosynthesis_protein_ElbB CR539_21340 AUJ97653 4130015 4132351 - hybrid_sensor_histidine_kinase/response regulator CR539_21345 AUJ98274 4132447 4133376 - TIGR01212_family_radical_SAM_protein CR539_21350 AUJ97654 4133768 4134004 - hypothetical_protein CR539_21355 CR539_21360 4133902 4134128 - hypothetical_protein no_locus_tag AUJ97655 4134051 4138511 + glutamate_synthase_large_subunit CR539_21365 AUJ97656 4138524 4139942 + glutamate_synthase_small_subunit CR539_21370 AUJ97657 4140126 4141253 + DUF1016_domain-containing_protein CR539_21375 AUJ97658 4141313 4141777 - YhcH/YjgK/YiaL_family_protein CR539_21380 AUJ97659 4141774 4142649 - N-acetylmannosamine_kinase CR539_21385 AUJ97660 4142646 4143335 - N-acetylmannosamine-6-phosphate_2-epimerase CR539_21390 AUJ97661 4143383 4144873 - MFS_transporter CR539_21395 AUJ97662 4144982 4145875 - N-acetylneuraminate_lyase nanA AUJ97663 4145997 4146788 - transcriptional_regulator_NanR CR539_21405 CR539_21410 4147058 4147168 - transposase no_locus_tag AUJ97664 4147168 4148535 + C4-dicarboxylate_transporter CR539_21415 AUJ97665 4148577 4149074 - stringent_starvation_protein_B CR539_21420 AUJ97666 4149080 4149718 - stringent_starvation_protein_A CR539_21425 AUJ97667 4149660 4149869 + hypothetical_protein CR539_21430 AUJ98275 4149821 4150000 - hypothetical_protein CR539_21435 AUJ97668 4149974 4150195 + hypothetical_protein CR539_21440 AUJ97669 4150113 4150505 - 30S_ribosomal_protein_S9 CR539_21445 AUJ97670 4150521 4150949 - 50S_ribosomal_protein_L13 CR539_21450 AUJ97671 4151168 4152295 - cell_division_protein_ZapE CR539_21455 AUJ98276 4152489 4152887 + hypothetical_protein CR539_21460 AUJ97672 4153041 4154408 + periplasmic_pH-dependent_serine_endoprotease DegQ CR539_21465 AUJ97673 4154498 4155565 + outer_membrane-stress_sensor_serine endopeptidase DegS CR539_21470 AUJ97674 4155628 4156566 - malate_dehydrogenase CR539_21475 AUJ97675 4157001 4157471 + arginine_repressor CR539_21480 AUJ98277 4157836 4158099 + DUF1471_domain-containing_protein CR539_21485 AUJ97676 4158155 4158427 - hypothetical_protein CR539_21490 AUJ97677 4158519 4160486 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CR539_21495 AUJ97678 4160492 4161424 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CR539_21500 AUJ97679 4161432 4161635 - protein_AaeX CR539_21505 AUJ97680 4161818 4162747 + HTH-type_transcriptional_activator_AaeR CR539_21510 AUJ97681 4162881 4164326 - metalloprotease_TldD CR539_21515 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AUJ97657 91 700 107.449856734 0.0 PJR32595.1 AUJ97658 98 311 100.0 5e-106 PJR32596.1 AUJ97659 97 511 100.0 3e-180 PJR32597.1 AUJ97660 99 459 100.0 8e-162 >> 319. CP019953_0 Source: Escherichia coli M8 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.5 Cumulative Blast bit score: 1973 Table of genes, locations, strands and annotations of subject cluster: AQW74890 3785307 3786293 + arabinose_5-phosphate_isomerase_KdsD B2H83_20005 AQW74891 3786314 3786880 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC B2H83_20010 AQW74892 3786877 3787452 + LPS_export_ABC_transporter_periplasmic_protein LptC B2H83_20015 AQW74893 3787421 3787978 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA B2H83_20020 AQW74894 3787985 3788710 + ABC_transporter_ATP-binding_protein B2H83_20025 AQW74895 3788758 3790191 + RNA_polymerase_sigma-54_factor B2H83_20030 AQW74896 3790214 3790501 + ribosome_hibernation_promoting_factor B2H83_20035 AQW74897 3790619 3791110 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN B2H83_20040 AQW74898 3791156 3792010 + RNase_adaptor_protein_RapZ B2H83_20045 AQW74899 3792007 3792279 + phosphocarrier_protein_NPr B2H83_20050 AQW74900 3792492 3793124 + hypothetical_protein B2H83_20055 AQW74901 3793121 3793849 - monofunctional_biosynthetic_peptidoglycan transglycosylase B2H83_20060 AQW74902 3793846 3794499 - glutamine_amidotransferase B2H83_20065 AQW74903 3794729 3797065 - hybrid_sensor_histidine_kinase/response regulator B2H83_20070 AQW76329 3797161 3798090 - TIGR01212_family_radical_SAM_protein B2H83_20075 AQW74904 3798482 3798718 - hypothetical_protein B2H83_20080 B2H83_20085 3798616 3798842 - hypothetical_protein no_locus_tag AQW74905 3798765 3803225 + glutamate_synthase_large_subunit B2H83_20090 AQW74906 3803238 3804656 + glutamate_synthase B2H83_20095 AQW74907 3804840 3805967 + hypothetical_protein B2H83_20100 AQW74908 3806027 3806491 - hypothetical_protein B2H83_20105 AQW74909 3806488 3807363 - N-acetylmannosamine_kinase B2H83_20110 AQW74910 3807360 3808049 - N-acetylmannosamine-6-phosphate_2-epimerase B2H83_20115 AQW74911 3808097 3809587 - MFS_transporter B2H83_20120 AQW74912 3809696 3810589 - N-acetylneuraminate_lyase B2H83_20125 AQW74913 3810711 3811502 - transcriptional_regulator_NanR B2H83_20130 B2H83_20135 3811772 3811882 - transposase no_locus_tag AQW74914 3811882 3813249 + C4-dicarboxylate_transporter B2H83_20140 AQW74915 3813292 3813789 - stringent_starvation_protein_B B2H83_20145 AQW74916 3813795 3814433 - stringent_starvation_protein_A sspA AQW74917 3814828 3815220 - 30S_ribosomal_protein_S9 B2H83_20155 AQW74918 3815236 3815664 - 50S_ribosomal_protein_L13 B2H83_20160 AQW74919 3815883 3817010 - cell_division_protein_ZapE B2H83_20165 AQW74920 3817204 3817602 + hypothetical_protein B2H83_20170 AQW74921 3817756 3819123 + periplasmic_pH-dependent_serine_endoprotease DegQ B2H83_20175 AQW74922 3819213 3820280 + outer_membrane-stress_sensor_serine endopeptidase DegS B2H83_20180 AQW74923 3820342 3821280 - malate_dehydrogenase B2H83_20185 AQW74924 3821715 3822185 + arginine_repressor B2H83_20190 AQW74925 3822550 3822813 + hypothetical_protein B2H83_20195 AQW74926 3822869 3823141 - hypothetical_protein B2H83_20200 AQW74927 3823233 3825200 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB B2H83_20205 AQW74928 3825206 3826138 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA B2H83_20210 AQW74929 3826146 3826349 - protein_AaeX B2H83_20215 AQW74930 3826532 3827461 + HTH-type_transcriptional_activator_AaeR B2H83_20220 AQW74931 3827589 3829034 - metalloprotease_TldD B2H83_20225 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AQW74907 91 698 107.449856734 0.0 PJR32595.1 AQW74908 98 311 100.0 7e-106 PJR32596.1 AQW74909 97 508 100.0 5e-179 PJR32597.1 AQW74910 99 456 100.0 1e-160 >> 320. CP015244_0 Source: Escherichia coli O91 str. RM7190 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2837 Table of genes, locations, strands and annotations of subject cluster: ATO78041 3737456 3738901 + metalloprotease_TldD tldD ATO78042 3739029 3739958 - transcriptional_regulator I51_18625 ATO79243 3740141 3740344 + transporter I51_18630 ATO78043 3740352 3741284 + efflux_transporter_periplasmic_adaptor_subunit I51_18635 ATO78044 3741290 3743257 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB I51_18640 ATO78045 3743349 3743621 + hypothetical_protein I51_18645 ATO78046 3743677 3743940 - hypothetical_protein I51_18650 ATO78047 3744305 3744775 - arginine_repressor I51_18655 ATO78048 3745210 3746148 + malate_dehydrogenase I51_18660 ATO78049 3746210 3747277 - outer_membrane-stress_sensor_serine endopeptidase DegS I51_18665 ATO78050 3747367 3748734 - serine_endoprotease_DegQ I51_18670 ATO78051 3748888 3749286 - hypothetical_protein I51_18675 ATO78052 3749480 3750607 + hypothetical_protein I51_18680 ATO78053 3750826 3751254 + 50S_ribosomal_protein_L13 I51_18685 ATO78054 3751270 3751662 + 30S_ribosomal_protein_S9 I51_18690 ATO78055 3752057 3752695 + stringent_starvation_protein_A sspA ATO78056 3752701 3753198 + ClpXP_protease_specificity-enhancing_factor I51_18700 ATO78057 3753241 3754608 - C4-dicarboxylate_transporter I51_18705 ATO78058 3754988 3755779 + transcriptional_regulator_NanR I51_18710 ATO78059 3755901 3756794 + N-acetylneuraminate_lyase I51_18715 ATO78060 3756903 3758393 + sialic_acid_transporter I51_18720 ATO78061 3758441 3759130 + N-acetylmannosamine-6-phosphate_2-epimerase I51_18725 ATO78062 3759127 3760002 + N-acetylmannosamine_kinase I51_18730 ATO78063 3759999 3760463 + hypothetical_protein I51_18735 ATO78064 3760523 3761650 - hypothetical_protein I51_18740 ATO78065 3761834 3763252 - glutamate_synthase I51_18745 ATO79244 3763265 3767725 - glutamate_synthase_large_subunit gltB ATO79245 3768400 3769329 + radical_SAM_protein I51_18755 ATO78066 3769425 3771761 + aerobic_respiration_two-component_sensor histidine kinase ArcB I51_18760 ATO78067 3771991 3772644 + isoprenoid_biosynthesis_protein_ElbB I51_18765 ATO78068 3772641 3773369 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA ATO78069 3773366 3773998 - hypothetical_protein I51_18775 ATO78070 3774212 3774484 - phosphohistidinoprotein-hexose phosphotransferase I51_18780 ATO78071 3774481 3775335 - RNase_adaptor_protein_RapZ I51_18785 ATO78072 3775381 3775872 - transcriptional_regulator I51_18790 ATO78073 3775990 3776277 - hypothetical_protein I51_18795 ATO78074 3776300 3777733 - RNA_polymerase_factor_sigma-54 I51_18800 ATO78075 3777781 3778506 - ABC_transporter_ATP-binding_protein I51_18805 ATO78076 3778513 3779070 - lipopolysaccharide_transport_periplasmic_protein LptA I51_18810 ATO78077 3779039 3779614 - LPS_export_ABC_transporter_periplasmic_protein LptC I51_18815 ATO78078 3779611 3780177 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase I51_18820 ATO78079 3780198 3781184 - D-arabinose_5-phosphate_isomerase I51_18825 ATO78080 3781198 3782175 - calcium/sodium_antiporter I51_18830 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ATO78064 91 699 107.449856734 0.0 PJR32598.1 ATO78060 99 990 100.0 0.0 PJR32599.1 ATO78059 100 611 100.0 0.0 PJR32600.1 ATO78058 100 537 100.0 0.0 >> 321. CP039753_0 Source: Escherichia coli strain NRRL B-1109 chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2821 Table of genes, locations, strands and annotations of subject cluster: QCJ14799 4120836 4122281 + metalloprotease_TldD tldD QCJ14800 4122415 4123344 - HTH-type_transcriptional_activator_AaeR aaeR QCJ14801 4123527 4123730 + DUF1656_domain-containing_protein FA026_20255 QCJ14802 4123738 4124670 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCJ14803 4124676 4126643 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCJ14804 4126735 4127007 + hypothetical_protein FA026_20270 QCJ14805 4127063 4127326 - peroxide/acid_stress_response_protein_YhcN yhcN QCJ14806 4127691 4128161 - transcriptional_regulator_ArgR argR QCJ14807 4128596 4129534 + malate_dehydrogenase mdh QCJ14808 4129597 4130664 - serine_endoprotease_DegS FA026_20290 QCJ14809 4130754 4132121 - serine_endoprotease_DegQ degQ QCJ14810 4132275 4132673 - DUF1043_family_protein FA026_20300 QCJ14811 4132867 4133994 + cell_division_protein_ZapE FA026_20305 QCJ14812 4134213 4134641 + 50S_ribosomal_protein_L13 rplM QCJ14813 4134657 4135049 + 30S_ribosomal_protein_S9 rpsI QCJ14814 4135444 4136082 + stringent_starvation_protein_A sspA QCJ14815 4136088 4136585 + ClpXP_protease_specificity-enhancing_factor sspB QCJ14816 4136628 4137995 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QCJ14817 4138374 4139165 + transcriptional_regulator_NanR nanR QCJ14818 4139287 4140180 + N-acetylneuraminate_lyase nanA QCJ14819 4140289 4141779 + sialic_acid_transporter_NanT nanT FA026_20350 4141827 4142515 + N-acetylmannosamine-6-phosphate_2-epimerase no_locus_tag FA026_20355 4142512 4143385 + ROK_family_protein no_locus_tag QCJ14820 4143382 4143846 + DUF386_domain-containing_protein FA026_20360 QCJ14821 4143906 4145033 - DUF1016_domain-containing_protein FA026_20365 QCJ14822 4145217 4145933 - DUF1120_domain-containing_protein FA026_20370 QCJ14823 4145930 4146475 - hypothetical_protein FA026_20375 QCJ14824 4146472 4148853 - fimbrial_biogenesis_outer_membrane_usher protein FA026_20380 QCJ14825 4148874 4149548 - fimbrial_chaperone_protein FA026_20385 QCJ14826 4149720 4150484 - DUF1120_domain-containing_protein FA026_20390 QCJ14827 4151044 4152462 - glutamate_synthase FA026_20395 QCJ15511 4152475 4156935 - glutamate_synthase_large_subunit gltB QCJ14828 4157610 4158539 + TIGR01212_family_radical_SAM_protein FA026_20405 QCJ14829 4158635 4160971 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QCJ14830 4161201 4161854 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QCJ14831 4161851 4162579 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QCJ14832 4162576 4163208 - PhoP_regulatory_network_protein_YrbL yrbL QCJ14833 4163422 4163694 - PTS_phosphocarrier_protein_NPr npr QCJ14834 4163691 4164545 - RNase_adapter_RapZ rapZ QCJ14835 4164591 4165082 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCJ14821 90 684 107.449856734 0.0 PJR32598.1 QCJ14819 99 990 100.0 0.0 PJR32599.1 QCJ14818 100 611 100.0 0.0 PJR32600.1 QCJ14817 99 536 100.0 0.0 >> 322. LR134216_0 Source: Escherichia coli strain NCTC10973 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2741 Table of genes, locations, strands and annotations of subject cluster: VEC24513 486724 488169 + TldD_protein tldD VEC24516 488303 489232 - LysR_family_transcriptional_regulator aaeR VEC24519 489415 489618 + protein_AaeX aaeX VEC24522 489626 490558 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VEC24526 490564 492531 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VEC24529 492623 492895 + barnase_inhibitor yhcO VEC24532 492951 493214 - protein_YcfR ycfR VEC24535 493579 494049 - arginine_repressor argR VEC24538 494484 495422 + malate_dehydrogenase mdh VEC24541 495473 496801 - transposase_insG NCTC10973_00478 VEC24544 496923 497990 - protease degS VEC24547 498080 499447 - serine_endoprotease degQ VEC24550 499601 499999 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VEC24553 500193 501320 + putative_ATP/GTP-binding_protein yhcM VEC24556 501539 501967 + 50S_ribosomal_protein_L13 rplM VEC24559 501983 502375 + 30S_ribosomal_protein_S9 rpsI VEC24562 502770 503408 + stringent_starvation_protein_A sspA VEC24565 503414 503911 + stringent_starvation_protein_B sspB VEC24568 503954 505321 - C4-dicarboxylate_transporter dcuD VEC24571 505701 506492 + GntR_family_transcriptional_regulator nanR VEC24574 506614 507507 + N-acetylneuraminate_lyase nanA VEC24577 507616 509106 + sialic_acid_transporter nanT VEC24580 509154 509843 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VEC24583 509840 510715 + putative_transcriptional_regulator nanK VEC24586 510712 511176 + beta-galactosidase yhcH VEC24589 511236 512363 - protein yhcG VEC24592 512548 513264 - putative_transcriptional_regulator yhcF VEC24595 513261 513806 - Uncharacterised_protein NCTC10973_00496 VEC24598 513803 516184 - putative_outer_membrane_protein yhcD VEC24601 516205 516879 - putative_periplasmic_chaperone_protein yhcA VEC24604 517051 517815 - periplasmic_protein gltF VEC24607 518375 519793 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VEC24610 519806 524359 - glutamate_synthase_subunit_alpha gltB VEC24613 524941 525870 + putative_radical_SAM_protein NCTC10973_00502 VEC24616 525966 528302 + aerobic_respiration_control_protein arcB VEC24619 528532 529185 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VEC24622 529182 529910 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VEC24625 529907 530539 - protein yrbL VEC24628 530753 531025 - phosphocarrier_protein ptsO VEC24631 531022 531876 - putative_ATPase yhbJ VEC24634 531922 532413 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VEC24589 90 684 107.449856734 0.0 PJR32597.1 VEC24580 99 456 100.0 1e-160 PJR32598.1 VEC24577 99 990 100.0 0.0 PJR32599.1 VEC24574 100 611 100.0 0.0 >> 323. CP033250_0 Source: Escherichia coli strain ECCHD184 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2741 Table of genes, locations, strands and annotations of subject cluster: AYP00577 485247 486692 + metalloprotease_TldD tldD AYP00578 486825 487754 - HTH-type_transcriptional_activator_AaeR aaeR AYP00579 487937 488140 + protein_AaeX D3W51_02390 AYP00580 488148 489080 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AYP00581 489086 491053 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AYP00582 491145 491417 + hypothetical_protein D3W51_02405 AYP00583 491473 491736 - DUF1471_domain-containing_protein D3W51_02410 AYP00584 492101 492571 - transcriptional_regulator_ArgR argR AYP00585 493006 493944 + malate_dehydrogenase D3W51_02420 AYP00586 494007 495074 - outer_membrane-stress_sensor_serine endopeptidase DegS D3W51_02425 AYP00587 495164 496531 - serine_endoprotease_DegQ degQ AYP04360 496685 497083 - DUF1043_family_protein D3W51_02435 AYP00588 497277 498404 + cell_division_protein_ZapE zapE AYP00589 498623 499051 + 50S_ribosomal_protein_L13 D3W51_02445 AYP00590 499067 499459 + 30S_ribosomal_protein_S9 D3W51_02450 AYP00591 499854 500492 + stringent_starvation_protein_A D3W51_02455 AYP00592 500498 500995 + stringent_starvation_protein_B D3W51_02460 AYP00593 501038 502405 - C4-dicarboxylate_transporter_DcuC dcuC AYP00594 502785 503576 + transcriptional_regulator_NanR D3W51_02470 AYP00595 503698 504591 + N-acetylneuraminate_lyase nanA AYP00596 504700 506190 + MFS_transporter D3W51_02480 AYP00597 506238 506927 + N-acetylmannosamine-6-phosphate_2-epimerase D3W51_02485 AYP00598 506924 507799 + N-acetylmannosamine_kinase D3W51_02490 AYP00599 507796 508260 + YhcH/YjgK/YiaL_family_protein D3W51_02495 AYP00600 508320 509447 - DUF1016_domain-containing_protein D3W51_02500 AYP00601 509632 510348 - DUF1120_domain-containing_protein D3W51_02505 AYP00602 510345 510890 - hypothetical_protein D3W51_02510 AYP00603 510887 513268 - fimbrial_biogenesis_outer_membrane_usher protein D3W51_02515 AYP00604 513289 513963 - fimbrial_chaperone_protein D3W51_02520 AYP00605 514135 514899 - glutamate_synthase_operon_protein_GltF D3W51_02525 AYP00606 515020 515304 - hypothetical_protein D3W51_02530 AYP00607 515459 516877 - glutamate_synthase D3W51_02535 AYP00608 516890 521350 - glutamate_synthase_large_subunit D3W51_02540 AYP04361 522025 522954 + TIGR01212_family_radical_SAM_protein D3W51_02545 AYP00609 523050 525386 + hybrid_sensor_histidine_kinase/response regulator D3W51_02550 AYP00610 525616 526269 + glutamine_amidotransferase D3W51_02555 AYP00611 526266 526994 + monofunctional_biosynthetic_peptidoglycan transglycosylase D3W51_02560 AYP00612 526991 527623 - PhoP_regulatory_network_protein_YrbL yrbL AYP00613 527837 528109 - phosphocarrier_protein_NPr D3W51_02570 AYP00614 528106 528960 - RNase_adaptor_protein_RapZ D3W51_02575 AYP00615 529006 529497 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AYP00600 90 684 107.449856734 0.0 PJR32597.1 AYP00597 99 456 100.0 1e-160 PJR32598.1 AYP00596 99 990 100.0 0.0 PJR32599.1 AYP00595 100 611 100.0 0.0 >> 324. CP010160_0 Source: Escherichia coli strain H1, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2739 Table of genes, locations, strands and annotations of subject cluster: APK48380 1835506 1836360 + glmZ(sRNA)-inactivating_NTPase RG44_09165 APK48381 1836357 1836629 + phosphohistidinoprotein-hexose phosphotransferase RG44_09170 APK48382 1836843 1837475 + hypothetical_protein RG44_09175 APK48383 1837472 1838200 - peptidoglycan_transglycosylase mtgA APK48384 1838197 1838850 - isoprenoid_biosynthesis_protein RG44_09185 APK48385 1839080 1841416 - aerobic_respiration_control_sensor_protein_ArcB RG44_09190 APK51133 1841512 1842441 - hypothetical_protein RG44_09195 APK51134 1843116 1847576 + glutamate_synthase gltB APK48386 1847589 1849007 + glutamate_synthase RG44_09205 APK48387 1849567 1850331 + gltF RG44_09210 APK48388 1850503 1851177 + fimbrial_chaperone_protein RG44_09215 APK48389 1851198 1853579 + fimbrial_protein RG44_09220 APK48390 1853576 1854121 + hypothetical_protein RG44_09225 APK48391 1854118 1854834 + hypothetical_protein RG44_09230 APK48392 1855019 1856146 + hypothetical_protein RG44_09235 APK48393 1856206 1856670 - hypothetical_protein RG44_09240 APK48394 1856667 1857542 - N-acetylmannosamine_kinase RG44_09245 APK48395 1857539 1858228 - N-acetylmannosamine-6-phosphate_2-epimerase RG44_09250 APK48396 1858276 1859766 - sialic_acid_transporter RG44_09255 APK48397 1859875 1860768 - N-acetylneuraminate_lyase RG44_09260 APK48398 1860890 1861681 - transcriptional_regulator_NanR RG44_09265 APK48399 1862061 1863428 + C4-dicarboxylate_transporter RG44_09270 APK48400 1863471 1863968 - Clp_protease_ClpP RG44_09275 APK48401 1863974 1864612 - stringent_starvation_protein_A sspA APK48402 1865007 1865399 - 30S_ribosomal_protein_S9 RG44_09285 APK48403 1865415 1865843 - 50S_ribosomal_protein_L13 RG44_09290 APK48404 1866062 1867189 - hypothetical_protein RG44_09295 APK48405 1867383 1867781 + hypothetical_protein RG44_09300 APK48406 1867935 1869302 + serine_endoprotease_DegQ RG44_09305 APK48407 1869392 1870459 + serine_endoprotease RG44_09310 APK48408 1870522 1871460 - malate_dehydrogenase RG44_09315 APK48409 1871895 1872365 + arginine_repressor RG44_09320 APK48410 1872730 1872993 + membrane_protein RG44_09325 APK48411 1873049 1873321 - hypothetical_protein RG44_09330 APK48412 1873413 1875380 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG44_09335 APK48413 1875386 1876318 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG44_09340 APK51135 1876326 1876529 - transporter RG44_09345 APK48414 1876712 1877641 + transcriptional_regulator RG44_09350 APK48415 1877775 1879220 - protease_TldD tldD APK48416 1879650 1883450 - hypothetical_protein RG44_09360 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APK48392 90 682 107.449856734 0.0 PJR32597.1 APK48395 99 456 100.0 1e-160 PJR32598.1 APK48396 99 990 100.0 0.0 PJR32599.1 APK48397 100 611 100.0 0.0 >> 325. CP013663_0 Source: Escherichia coli strain GB089, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2656 Table of genes, locations, strands and annotations of subject cluster: ANO79766 3911243 3912229 + D-arabinose_5-phosphate_isomerase CO57_20020 ANO79767 3912250 3912816 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase CO57_20025 ANO79768 3912813 3913388 + LPS_export_ABC_transporter_periplasmic_protein LptC CO57_20030 ANO79769 3913357 3913914 + lipopolysaccharide_transport_periplasmic_protein LptA CO57_20035 ANO79770 3913921 3914646 + LPS_export_ABC_transporter_ATP-binding_protein CO57_20040 ANO79771 3914694 3916127 + RNA_polymerase_sigma-54_factor CO57_20045 ANO79772 3916150 3916437 + hypothetical_protein CO57_20050 ANO79773 3916555 3917046 + transcriptional_regulator CO57_20055 ANO79774 3917092 3917946 + glmZ(sRNA)-inactivating_NTPase CO57_20060 ANO79775 3917943 3918215 + phosphohistidinoprotein-hexose phosphotransferase CO57_20065 ANO79776 3918429 3919061 + hypothetical_protein CO57_20070 ANO79777 3919058 3919786 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA ANO79778 3919783 3920436 - isoprenoid_biosynthesis_protein CO57_20080 ANO79779 3920666 3923002 - hybrid_sensor_histidine_kinase/response regulator CO57_20085 ANO81134 3923098 3924027 - radical_SAM_protein CO57_20090 ANO81135 3924702 3929162 + glutamate_synthase_subunit_alpha gltB ANO79780 3929175 3930593 + glutamate_synthase CO57_20100 ANO79781 3930777 3931904 + hypothetical_protein CO57_20105 ANO79782 3931964 3932428 - hypothetical_protein CO57_20110 ANO79783 3932425 3933300 - N-acetylmannosamine_kinase CO57_20115 ANO79784 3933297 3933986 - N-acetylmannosamine-6-phosphate_2-epimerase CO57_20120 ANO79785 3934034 3935524 - sialic_acid_transporter CO57_20125 ANO79786 3935633 3936526 - N-acetylneuraminate_lyase CO57_20130 ANO79787 3936648 3937439 - transcriptional_regulator_NanR CO57_20135 ANO79788 3937819 3939186 + C4-dicarboxylate_transporter CO57_20140 ANO79789 3939229 3939726 - stringent_starvation_protein_B CO57_20145 ANO79790 3939732 3940370 - stringent_starvation_protein_A sspA ANO79791 3940765 3941157 - 30S_ribosomal_protein_S9 CO57_20155 ANO79792 3941173 3941601 - 50S_ribosomal_protein_L13 CO57_20160 ANO79793 3941820 3942947 - hypothetical_protein CO57_20165 ANO79794 3943141 3943539 + hypothetical_protein CO57_20170 ANO79795 3943693 3945060 + serine_endoprotease_DegQ CO57_20175 ANO79796 3945150 3946217 + outer_membrane-stress_sensor_serine endopeptidase DegS CO57_20180 ANO79797 3946280 3947218 - malate_dehydrogenase CO57_20185 ANO79798 3947653 3948123 + arginine_repressor CO57_20190 ANO79799 3948488 3948751 + hypothetical_protein CO57_20195 ANO79800 3948807 3949079 - hypothetical_protein CO57_20200 ANO79801 3949171 3951138 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CO57_20205 ANO79802 3951144 3952076 - p-hydroxybenzoic_acid_efflux_subunit_AaeA CO57_20210 ANO81136 3952084 3952287 - transporter CO57_20215 ANO79803 3952470 3953399 + transcriptional_regulator CO57_20220 ANO79804 3953527 3954972 - metalloprotease_TldD tldD ANO79805 3955128 3958928 - hypothetical_protein CO57_20230 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ANO79781 92 701 107.449856734 0.0 PJR32596.1 ANO79783 97 509 100.0 2e-179 PJR32597.1 ANO79784 99 456 100.0 1e-160 PJR32598.1 ANO79785 99 990 100.0 0.0 >> 326. CP002729_0 Source: Escherichia coli UMNK88, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2652 Table of genes, locations, strands and annotations of subject cluster: AEE58496 3835767 3836621 + conserved_hypothetical_protein UMNK88_3967 AEE58497 3836618 3836890 + conserved_hypothetical_protein UMNK88_3968 AEE58498 3837104 3837736 + conserved_hypothetical_protein UMNK88_3970 AEE58499 3837733 3838461 - monofunctional_biosynthetic_peptidoglycan transglycosylase MtgA mtgA AEE58500 3838458 3839111 - enhancing_lycopene_biosynthesis_protein UMNK88_3971 AEE58501 3839341 3841677 - aerobic_respiration_control_sensor_protein_ArcB UMNK88_3972 AEE58502 3841773 3842702 - conserved_hypothetical_protein UMNK88_3973 AEE58503 3843380 3847837 + glutamate_synthase,_subunit_alpha UMNK88_3974 AEE58504 3847850 3849268 + glutamatesynthase_subunit_beta UMNK88_3975 AEE58505 3849828 3850592 + conserved_hypothetical_protein UMNK88_3976 AEE58506 3850764 3851438 + gram-negative_pili_assembly_chaperone, N-terminal domain protein UMNK88_3977 AEE58507 3851459 3853840 + outer_membrane_usher_protein_YhcD UMNK88_3978 AEE58508 3853837 3854382 + conserved_hypothetical_protein UMNK88_3979 AEE58509 3854379 3855095 + conserved_hypothetical_protein UMNK88_3980 AEE58510 3855280 3856329 + conserved_hypothetical_protein UMNK88_3981 AEE58511 3856389 3856853 - conserved_hypothetical_protein UMNK88_3982 AEE58512 3856850 3857725 - putative_N-acetylmannosamine_kinase UMNK88_3983 AEE58513 3857722 3858411 - putative_N-acetylmannosamine-6-P_epimerase UMNK88_3984 AEE58514 3858459 3859949 - putative_sialic_acid_transporter_protein UMNK88_3985 AEE58515 3860059 3860952 - N-acetylneuraminate_lyase_NanA nanA AEE58516 3861074 3861856 - transcriptional_regulator_NanR UMNK88_3987 AEE58517 3862245 3863612 + putative_cryptic_C4-dicarboxylate_transporter DcuD UMNK88_3988 AEE58518 3863655 3864152 - stringent_starvation_protein_B UMNK88_3989 AEE58519 3864158 3864796 - stringent_starvation_protein_A UMNK88_3990 AEE58520 3865191 3865583 - conserved_hypothetical_protein UMNK88_3991 AEE58521 3865599 3866027 - ribosomal_protein_RplM rplM AEE58522 3866246 3867373 - conserved_hypothetical_protein UMNK88_3993 AEE58523 3867567 3867965 + conserved_hypothetical_protein UMNK88_3994 AEE58524 3868119 3869486 + protease_DegQ UMNK88_3995 AEE58525 3869576 3870643 + periplasmic_serine_peptidase_DegS degS AEE58526 3870706 3871644 - malate_dehydrogenase,_NAD-dependent mdh AEE58527 3872079 3872549 + arginine_repressor_ArgR argR AEE58528 3872863 3873177 + conserved_hypothetical_protein UMNK88_3999 AEE58529 3873233 3873505 - conserved_hypothetical_protein UMNK88_4000 AEE58530 3873597 3875564 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB UMNK88_4001 AEE58531 3875570 3876502 - conserved_hypothetical_protein UMNK88_4002 AEE58532 3876510 3876782 - conserved_hypothetical_protein UMNK88_4003 AEE58533 3876914 3877825 + transcriptional_activator_protein_AaeR UMNK88_4004 AEE58534 3877959 3879404 - modulator_of_DNA_gyrase UMNK88_4005 AEE58535 3879834 3882794 - conserved_hypothetical_protein UMNK88_4006 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AEE58510 97 699 100.0 0.0 PJR32596.1 AEE58512 97 507 100.0 1e-178 PJR32597.1 AEE58513 99 456 100.0 1e-160 PJR32598.1 AEE58514 99 990 100.0 0.0 >> 327. CP047571_0 Source: Escherichia coli strain 2EC1 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2645 Table of genes, locations, strands and annotations of subject cluster: QHI47126 513786 515231 + metalloprotease_TldD tldD QHI47127 515365 516294 - HTH-type_transcriptional_activator_AaeR aaeR QHI47128 516477 516680 + DUF1656_domain-containing_protein GTQ78_02500 QHI47129 516688 517620 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHI47130 517626 519593 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHI47131 519685 519957 + hypothetical_protein GTQ78_02515 QHI47132 520013 520276 - peroxide/acid_stress_response_protein_YhcN yhcN QHI47133 520641 521111 - transcriptional_regulator_ArgR argR QHI47134 521546 522484 + malate_dehydrogenase mdh QHI47135 522547 523614 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QHI47136 523704 525071 - serine_endoprotease_DegQ degQ QHI47137 525225 525623 - DUF1043_family_protein GTQ78_02545 QHI47138 525817 526944 + cell_division_protein_ZapE zapE QHI47139 527163 527591 + 50S_ribosomal_protein_L13 rplM QHI47140 527607 527999 + 30S_ribosomal_protein_S9 rpsI QHI47141 528394 529032 + stringent_starvation_protein_A sspA QHI47142 529038 529535 + ClpXP_protease_specificity-enhancing_factor sspB QHI47143 529578 530945 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHI47144 531325 532116 + transcriptional_regulator_NanR nanR QHI47145 532238 533131 + N-acetylneuraminate_lyase nanA QHI47146 533240 534730 + sialic_acid_transporter_NanT nanT QHI47147 534778 535467 + putative_N-acetylmannosamine-6-phosphate 2-epimerase GTQ78_02595 QHI47148 535464 536339 + ROK_family_protein GTQ78_02600 QHI47149 536336 536800 + YhcH/YjgK/YiaL_family_protein GTQ78_02605 GTQ78_02610 536893 537986 - DUF1016_family_protein no_locus_tag QHI47150 538171 538887 - DUF1120_domain-containing_protein GTQ78_02615 QHI47151 538884 539429 - hypothetical_protein GTQ78_02620 QHI50580 539426 541780 - fimbrial_biogenesis_usher_protein GTQ78_02625 GTQ78_02630 541830 542527 + IS1_family_transposase no_locus_tag QHI47152 542605 543279 - fimbria/pilus_periplasmic_chaperone GTQ78_02635 QHI47153 543451 544215 - DUF1120_domain-containing_protein GTQ78_02640 QHI47154 544775 546193 - glutamate_synthase GTQ78_02645 QHI50581 546206 550666 - glutamate_synthase_large_subunit gltB QHI47155 551341 552270 + TIGR01212_family_radical_SAM_protein GTQ78_02655 QHI47156 552366 554702 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHI47157 554932 555585 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHI47158 555582 556310 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHI47159 556307 556939 - PhoP_regulatory_network_protein_YrbL yrbL Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 QHI47148 97 508 100.0 5e-179 PJR32598.1 QHI47146 99 990 100.0 0.0 PJR32599.1 QHI47145 100 611 100.0 0.0 PJR32600.1 QHI47144 99 536 100.0 0.0 >> 328. AP021892_0 Source: Escherichia coli 2018-01-1CC DNA, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2635 Table of genes, locations, strands and annotations of subject cluster: BBP22632 3417091 3418536 + metalloprotease_TldD tldD BBP22633 3418670 3419599 - HTH-type_transcriptional_activator_AaeR aaeR BBP22634 3419713 3419985 + efflux_system_membrane_protein VEGS02_31590 BBP22635 3419993 3420925 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA BBP22636 3420931 3422898 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB BBP22637 3422990 3423262 + hypothetical_protein yhcO BBP22638 3423318 3423632 - membrane_protein VEGS02_31630 BBP22639 3423946 3424416 - arginine_repressor argR BBP22640 3424851 3425789 + malate_dehydrogenase mdh BBP22641 3425852 3426919 - serine_endoprotease_DegS degS BBP22642 3427009 3428376 - periplasmic_pH-dependent_serine_endoprotease DegQ degQ BBP22643 3428530 3428928 - putative_cytochrome_d_ubiquinol_oxidase_subunit 3 yhcB BBP22644 3429278 3430249 + cell_division_protein_ZapE zapE BBP22645 3430468 3430896 + 50S_ribosomal_protein_L13 rplM BBP22646 3430912 3431304 + 30S_ribosomal_protein_S9 rpsI BBP22647 3431699 3432337 + stringent_starvation_protein_A sspA BBP22648 3432343 3432840 + stringent_starvation_protein_B sspB BBP22649 3432882 3434249 - C4-dicarboxylate_ABC_transporter dcuD BBP22650 3434638 3435420 + transcriptional_regulator_NanR nanR BBP22651 3435542 3436435 + N-acetylneuraminate_lyase nanA BBP22652 3436545 3438035 + putative_sialic_acid_transporter nanT BBP22653 3438083 3438772 + putative_N-acetylmannosamine-6-phosphate 2-epimerase nanE BBP22654 3438769 3439644 + N-acetylmannosamine_kinase nanK BBP22655 3439641 3440105 + hypothetical_protein yhcH BBP22656 3440165 3441292 - hypothetical_protein yhcG BBP22657 3441477 3442193 - hypothetical_protein yhcF BBP22658 3442190 3442735 - hypothetical_protein yhcE BBP22659 3442732 3445113 - putative_outer_membrane_usher_protein_YhcD yhcD BBP22660 3445134 3445808 - putative_fimbrial_chaperone_YhcA yhcA BBP22661 3445980 3446744 - protein_GltF gltF BBP22662 3447304 3448722 - glutamate_synthase_[NADPH]_small_chain gltD BBP22663 3448735 3453303 - glutamate_synthase gltB BBP22664 3453837 3454799 + protein_YhcC yhcC BBP22665 3454895 3457231 + aerobic_respiration_control_sensor_protein_ArcB arcB_2 BBP22666 3457461 3458114 + glyoxalase elbB BBP22667 3458111 3458839 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA BBP22668 3458836 3459468 - hypothetical_protein yrbL BBP22669 3459682 3459954 - phosphocarrier_protein_NPr npr BBP22670 3459951 3460805 - RNase_adapter_protein_RapZ rapZ BBP22671 3460851 3461342 - nitrogen_regulatory_protein ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 BBP22656 90 682 107.449856734 0.0 PJR32596.1 BBP22654 97 507 100.0 1e-178 PJR32597.1 BBP22653 99 456 100.0 1e-160 PJR32598.1 BBP22652 99 990 100.0 0.0 >> 329. CP046009_0 Source: Escherichia coli strain 1919D62 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2511 Table of genes, locations, strands and annotations of subject cluster: QGL36181 493429 494874 + metalloprotease_TldD tldD QGL36182 495008 495937 - HTH-type_transcriptional_activator_AaeR aaeR QGL36183 496120 496323 + DUF1656_domain-containing_protein GJD96_04005 QGL36184 496331 497263 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QGL36185 497269 499236 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QGL36186 499328 499600 + hypothetical_protein GJD96_04020 QGL36187 499656 499919 - peroxide/acid_stress_response_protein_YhcN yhcN QGL36188 500284 500754 - transcriptional_regulator_ArgR argR QGL36189 501189 502127 + malate_dehydrogenase mdh QGL36190 502189 503256 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QGL36191 503346 504713 - serine_endoprotease_DegQ degQ QGL36192 504867 505265 - DUF1043_family_protein GJD96_04050 QGL36193 505459 506586 + cell_division_protein_ZapE zapE QGL36194 506805 507233 + 50S_ribosomal_protein_L13 rplM QGL36195 507249 507641 + 30S_ribosomal_protein_S9 rpsI QGL36196 508036 508674 + stringent_starvation_protein_A sspA QGL36197 508680 509177 + ClpXP_protease_specificity-enhancing_factor sspB QGL36198 509220 510587 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QGL36199 510967 511758 + transcriptional_regulator_NanR nanR QGL36200 511880 512773 + N-acetylneuraminate_lyase nanA QGL36201 512882 514372 + sialic_acid_transporter_NanT nanT QGL36202 514420 515109 + putative_N-acetylmannosamine-6-phosphate 2-epimerase GJD96_04100 QGL36203 515106 515981 + ROK_family_protein GJD96_04105 QGL36204 515978 516442 + YhcH/YjgK/YiaL_family_protein GJD96_04110 QGL36205 516502 517629 - DUF1016_family_protein GJD96_04115 QGL36206 517813 519231 - NAD(P)-binding_protein GJD96_04120 QGL39776 519244 523704 - glutamate_synthase_large_subunit gltB QGL39777 524379 525308 + TIGR01212_family_radical_SAM_protein GJD96_04130 QGL36207 525404 527740 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QGL36208 527970 528623 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QGL36209 528620 529348 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QGL36210 529345 529977 - PhoP_regulatory_network_protein_YrbL yrbL QGL36211 530191 530463 - PTS_phosphocarrier_protein_NPr npr QGL36212 530460 531314 - RNase_adapter_RapZ rapZ QGL36213 531360 531851 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QGL36214 531969 532256 - ribosome_hibernation_promoting_factor GJD96_04170 QGL36215 532279 533712 - RNA_polymerase_factor_sigma-54 rpoN QGL36216 533760 534485 - LPS_export_ABC_transporter_ATP-binding_protein lptB QGL36217 534492 535049 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QGL36218 535018 535593 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QGL36219 535590 536156 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QGL39778 536177 537163 - arabinose-5-phosphate_isomerase_KdsD kdsD QGL36220 537177 538154 - calcium/sodium_antiporter GJD96_04205 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QGL36205 91 699 107.449856734 0.0 PJR32595.1 QGL36204 98 314 100.0 3e-107 PJR32596.1 QGL36203 97 508 100.0 5e-179 PJR32598.1 QGL36201 99 990 100.0 0.0 >> 330. LR134225_0 Source: Escherichia coli strain NCTC9054 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2492 Table of genes, locations, strands and annotations of subject cluster: VEC47212 495758 496003 + TldD_protein tldD_1 VEC47213 495957 497204 + TldD_protein tldD_2 VEC47214 497332 498261 - LysR_family_transcriptional_regulator aaeR VEC47215 498444 498647 + protein_AaeX aaeX VEC47216 498735 499589 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VEC47217 499595 501562 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VEC47218 501654 501926 + barnase_inhibitor yhcO VEC47219 501982 502245 - protein_YcfR ycfR VEC47220 502610 503080 - arginine_repressor argR VEC47221 503515 504453 + malate_dehydrogenase mdh VEC47222 504517 505584 - protease degS VEC47223 505674 507041 - serine_endoprotease degQ VEC47224 507195 507593 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VEC47225 507787 508914 + putative_ATP/GTP-binding_protein yhcM VEC47226 509133 509561 + 50S_ribosomal_protein_L13 rplM VEC47227 509577 509969 + 30S_ribosomal_protein_S9 rpsI VEC47228 510364 511002 + stringent_starvation_protein_A sspA VEC47229 511008 511505 + stringent_starvation_protein_B sspB VEC47230 511548 512915 - C4-dicarboxylate_transporter dcuD VEC47231 513295 514086 + GntR_family_transcriptional_regulator nanR VEC47232 514208 515101 + N-acetylneuraminate_lyase nanA VEC47233 515210 516700 + sialic_acid_transporter nanT VEC47234 516748 517437 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VEC47235 517434 518309 + putative_transcriptional_regulator nanK VEC47236 518306 518770 + beta-galactosidase yhcH VEC47237 518846 519151 - IS600_orf-like_protein NCTC9054_00575 VEC47238 519168 519647 - protein yhcG VEC47239 519831 520700 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VEC47240 520639 521250 - glutamate_synthase_(NADPH)_small_subunit gltD_2 VEC47241 521263 524145 - glutamate_synthase_subunit_alpha gltB_1 VEC47242 524180 525817 - glutamate_synthase_subunit_alpha gltB_2 VEC47243 526399 527328 + putative_radical_SAM_protein NCTC9054_00581 VEC47244 527424 529760 + aerobic_respiration_control_protein arcB VEC47245 529990 530643 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VEC47246 530640 531368 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VEC47247 531365 531997 - protein yrbL VEC47248 532211 532483 - phosphocarrier_protein ptsO VEC47249 532480 533334 - putative_ATPase yhbJ VEC47250 533380 533871 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN VEC47251 533989 534276 - putative_sigma(54)_modulation_protein yhbH VEC47252 534299 535732 - RNA_polymerase_sigma-54_factor_(sigma-N) rpoN VEC47253 535780 536505 - lipopolysaccharide_ABC_transporter lptB VEC47254 536512 537069 - lipopolysaccharide_transport_periplasmic_protein LptA yhbN VEC47255 537038 537613 - putative_organic_solvent_tolerance_protein lptC VEC47256 537610 538176 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC VEC47257 538197 538985 - D-arabinose_5-phosphate_isomerase kdsD_1 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 VEC47235 97 509 100.0 2e-179 PJR32597.1 VEC47234 99 456 100.0 1e-160 PJR32598.1 VEC47233 99 990 100.0 0.0 PJR32600.1 VEC47231 100 537 100.0 0.0 >> 331. LR130532_0 Source: Escherichia coli isolate ecoli019 genome assembly, chromosome: 0. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2492 Table of genes, locations, strands and annotations of subject cluster: VDL33309 4273934 4274500 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC VDL33315 4274497 4275072 + Lipopolysaccharide_export_system_protein_LptC lptC VDL33321 4275041 4275598 + Lipopolysaccharide_export_system_protein_LptA lptA VDL33328 4275605 4276330 + ole(C)_1_L06249 BANRA_04119 VDL33334 4276378 4277811 + RNA_polymerase_sigma-54_factor rpoN VDL33340 4277834 4278121 + Ribosome_hibernation_promoting_factor hpf VDL33343 4278239 4278730 + Nitrogen_regulatory_protein ptsN VDL33346 4278776 4279630 + RNase_adapter_protein_RapZ rapZ VDL33352 4279627 4279899 + Phosphocarrier_protein_NPr ptsO VDL33358 4280113 4280745 + hypothetical_protein BANRA_04125 VDL33364 4280742 4281470 - Biosynthetic_peptidoglycan_transglycosylase mtgA VDL33370 4281467 4282120 - Glyoxalase_ElbB elbB VDL33376 4282350 4284686 - VanS-D_1_AB242319 BANRA_04128 VDL33382 4284782 4285711 - Ribosomal_protein_S12_methylthiotransferase RimO rimO_3 VDL33388 4286293 4290846 + Glutamate_synthase_[NADPH]_large_chain gltB VDL33394 4290859 4292277 + Glutamate_synthase_[NADPH]_small_chain gltD_3 VDL33401 4292461 4292940 + hypothetical_protein BANRA_04132 VDL33407 4292957 4293262 + hypothetical_protein BANRA_04133 VDL33413 4293338 4293802 - Toxin-antitoxin_biofilm_protein_TabA tabA_2 VDL33419 4293799 4294674 - N-acetylmannosamine_kinase nanK_2 VDL33425 4294671 4295360 - Putative_N-acetylmannosamine-6-phosphate 2-epimerase 2 nanE2 VDL33431 4295408 4296898 - Putative_sialic_acid_transporter nanT VDL33439 4297007 4297900 - N-acetylneuraminate_lyase nanA_2 VDL33444 4298022 4298813 - Glc_operon_transcriptional_activator glcC VDL33451 4299192 4300559 + Putative_cryptic_C4-dicarboxylate_transporter DcuD dcuD_2 VDL33454 4300602 4301099 - Stringent_starvation_protein_B sspB VDL33460 4301105 4301743 - Stringent_starvation_protein_A sspA VDL33466 4302138 4302530 - 30S_ribosomal_protein_S9 rpsI VDL33472 4302546 4302974 - 50S_ribosomal_protein_L13 rplM VDL33481 4303193 4304320 - Cell_division_protein_ZapE zapE VDL33488 4304514 4304912 + Inner_membrane_protein_YhcB yhcB VDL33495 4305066 4306433 + Periplasmic_pH-dependent_serine_endoprotease DegQ degQ VDL33501 4306523 4307590 + Serine_endoprotease_DegS degS VDL33507 4307653 4308591 - Malate_dehydrogenase mdh_2 VDL33515 4309026 4309496 + Arginine_repressor argR VDL33521 4309857 4310120 + Multiple_stress_resistance_protein_BhsA bhsA_5 VDL33527 4310176 4310448 - hypothetical_protein BANRA_04152 VDL33533 4310540 4312507 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB_2 VDL33539 4312513 4313445 - oqxA_1_EU370913 BANRA_04154 VDL33547 4313453 4313656 - Protein_AaeX aaeX VDL33554 4313839 4314768 + HTH-type_transcriptional_regulator_DmlR dmlR_4 VDL33559 4314896 4316341 - Metalloprotease_TldD tldD VDL33564 4316497 4320297 - hypothetical_protein BANRA_04158 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 VDL33419 97 509 100.0 2e-179 PJR32597.1 VDL33425 99 456 100.0 1e-160 PJR32598.1 VDL33431 99 990 100.0 0.0 PJR32600.1 VDL33444 100 537 100.0 0.0 >> 332. CP043541_0 Source: Escherichia coli strain 15RDA-Livestock feces-ECO087 chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2492 Table of genes, locations, strands and annotations of subject cluster: QIL66330 3320911 3322356 + metalloprotease_TldD tldD QIL66331 3322490 3323419 - HTH-type_transcriptional_activator_AaeR aaeR QIL66332 3323602 3323805 + DUF1656_domain-containing_protein F0L67_16145 QIL66333 3323813 3324745 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QIL66334 3324751 3326718 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIL66335 3326810 3327082 + hypothetical_protein F0L67_16160 QIL66336 3327138 3327401 - peroxide/acid_stress_response_protein_YhcN yhcN QIL66337 3327766 3328236 - transcriptional_regulator_ArgR argR QIL66338 3328671 3329609 + malate_dehydrogenase mdh QIL66339 3329672 3330739 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QIL66340 3330829 3332196 - serine_endoprotease_DegQ degQ QIL66341 3332350 3332748 - DUF1043_family_protein F0L67_16190 QIL66342 3332942 3334069 + cell_division_protein_ZapE F0L67_16195 QIL66343 3334288 3334716 + 50S_ribosomal_protein_L13 rplM QIL66344 3334732 3335124 + 30S_ribosomal_protein_S9 rpsI QIL66345 3335042 3335263 - hypothetical_protein F0L67_16210 QIL66346 3335519 3336157 + stringent_starvation_protein_A sspA QIL66347 3336163 3336660 + ClpXP_protease_specificity-enhancing_factor sspB QIL66348 3336703 3338070 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIL66349 3338450 3339241 + transcriptional_regulator_NanR nanR QIL66350 3339363 3340256 + N-acetylneuraminate_lyase nanA QIL66351 3340365 3341855 + sialic_acid_transporter_NanT nanT QIL66352 3341903 3342592 + N-acetylmannosamine-6-phosphate_2-epimerase F0L67_16245 QIL68502 3342589 3343464 + N-acetylmannosamine_kinase F0L67_16250 QIL66353 3343461 3343925 + DUF386_domain-containing_protein F0L67_16255 QIL66354 3344001 3344306 - transposase F0L67_16260 QIL66355 3344323 3344802 - DUF1016_domain-containing_protein F0L67_16265 QIL66356 3344986 3346404 - glutamate_synthase F0L67_16270 QIL68503 3346417 3350877 - glutamate_synthase_large_subunit gltB QIL66357 3351552 3352481 + TIGR01212_family_radical_SAM_protein F0L67_16280 QIL66358 3352577 3354913 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIL66359 3355143 3355796 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIL66360 3355793 3356521 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QIL66361 3356518 3357150 - PhoP_regulatory_network_protein_YrbL yrbL QIL66362 3357364 3357636 - PTS_phosphocarrier_protein_NPr npr QIL66363 3357633 3358487 - RNase_adapter_RapZ rapZ QIL66364 3358533 3359024 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QIL66365 3359142 3359429 - ribosome_hibernation_promoting_factor F0L67_16320 QIL66366 3359452 3360885 - RNA_polymerase_factor_sigma-54 rpoN QIL66367 3360933 3361658 - LPS_export_ABC_transporter_ATP-binding_protein lptB QIL66368 3361665 3362222 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QIL66369 3362191 3362766 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QIL66370 3362763 3363329 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QIL66371 3363350 3364336 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 QIL68502 97 509 100.0 2e-179 PJR32597.1 QIL66352 99 456 100.0 1e-160 PJR32598.1 QIL66351 99 990 100.0 0.0 PJR32600.1 QIL66349 100 537 100.0 0.0 >> 333. CP035360_0 Source: Escherichia coli strain BR10-DEC chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2492 Table of genes, locations, strands and annotations of subject cluster: QAU67647 1521574 1523019 + metalloprotease_TldD tldD QAU67648 1523147 1524076 - HTH-type_transcriptional_activator_AaeR aaeR QAU67649 1524259 1524462 + DUF1656_domain-containing_protein ETE50_07995 QAU67650 1524470 1525402 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QAU67651 1525408 1527375 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QAU67652 1527467 1527739 + hypothetical_protein ETE50_08010 QAU67653 1527795 1528058 - peroxide/acid_stress_response_protein_YhcN yhcN QAU67654 1528423 1528893 - transcriptional_regulator_ArgR argR QAU67655 1529328 1530266 + malate_dehydrogenase ETE50_08025 QAU67656 1530329 1531396 - serine_endoprotease_DegS degS QAU67657 1531486 1532853 - serine_endoprotease_DegQ degQ QAU67658 1533007 1533405 - DUF1043_family_protein ETE50_08040 QAU67659 1533599 1534726 + cell_division_protein_ZapE zapE QAU67660 1534945 1535373 + 50S_ribosomal_protein_L13 ETE50_08050 QAU67661 1535389 1535781 + 30S_ribosomal_protein_S9 ETE50_08055 QAU67662 1535699 1535920 - hypothetical_protein ETE50_08060 QAU67663 1536176 1536814 + stringent_starvation_protein_A ETE50_08065 QAU67664 1536820 1537317 + ClpXP_protease_specificity-enhancing_factor sspB QAU67665 1537360 1538727 - C4-dicarboxylate_transporter_DcuC dcuC QAU67666 1539107 1539898 + transcriptional_regulator_NanR ETE50_08080 QAU67667 1540020 1540913 + N-acetylneuraminate_lyase nanA QAU67668 1541022 1542512 + MFS_transporter ETE50_08090 QAU67669 1542560 1543249 + N-acetylmannosamine-6-phosphate_2-epimerase ETE50_08095 QAU70868 1543246 1544121 + N-acetylmannosamine_kinase ETE50_08100 QAU67670 1544118 1544582 + YhcH/YjgK/YiaL_family_protein ETE50_08105 QAU67671 1544658 1544963 - transposase ETE50_08110 QAU67672 1544980 1545459 - DUF1016_family_protein ETE50_08115 QAU67673 1545643 1547061 - glutamate_synthase ETE50_08120 QAU67674 1547074 1551534 - glutamate_synthase_large_subunit gltB QAU67675 1552209 1553138 + TIGR01212_family_radical_SAM_protein ETE50_08130 QAU67676 1553234 1555570 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QAU67677 1555800 1556453 + isoprenoid_biosynthesis_protein_ElbB elbB QAU67678 1556450 1557178 + monofunctional_biosynthetic_peptidoglycan transglycosylase ETE50_08145 QAU67679 1557175 1557807 - PhoP_regulatory_network_protein_YrbL yrbL QAU67680 1558021 1558293 - PTS_phosphocarrier_protein_NPr ETE50_08155 QAU67681 1558290 1559144 - RNase_adapter_RapZ rapZ QAU67682 1559190 1559681 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QAU67683 1559799 1560086 - ribosome_hibernation_promoting_factor ETE50_08170 QAU67684 1560109 1561542 - RNA_polymerase_factor_sigma-54 ETE50_08175 QAU67685 1561590 1562315 - lipopolysaccharide_ABC_transporter_ATP-binding protein ETE50_08180 QAU67686 1562322 1562879 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QAU67687 1562848 1563423 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QAU67688 1563420 1563986 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QAU67689 1564007 1564993 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 QAU70868 97 509 100.0 2e-179 PJR32597.1 QAU67669 99 456 100.0 1e-160 PJR32598.1 QAU67668 99 990 100.0 0.0 PJR32600.1 QAU67666 100 537 100.0 0.0 >> 334. CP035354_0 Source: Escherichia coli strain BR64-DEC chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2492 Table of genes, locations, strands and annotations of subject cluster: QAU99838 1152245 1153690 + metalloprotease_TldD tldD QAU99839 1153824 1154753 - HTH-type_transcriptional_activator_AaeR aaeR QAU99840 1154936 1155139 + DUF1656_domain-containing_protein ETE55_05840 QAU99841 1155147 1156079 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QAU99842 1156085 1158052 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QAU99843 1158144 1158416 + hypothetical_protein ETE55_05855 QAU99844 1158472 1158735 - peroxide/acid_stress_response_protein_YhcN yhcN QAU99845 1159100 1159570 - transcriptional_regulator_ArgR argR QAU99846 1160005 1160943 + malate_dehydrogenase ETE55_05870 QAU99847 1161006 1162073 - serine_endoprotease_DegS degS QAU99848 1162163 1163530 - serine_endoprotease_DegQ degQ QAU99849 1163684 1164082 - DUF1043_family_protein ETE55_05885 QAU99850 1164276 1165403 + cell_division_protein_ZapE zapE QAU99851 1165622 1166050 + 50S_ribosomal_protein_L13 ETE55_05895 QAU99852 1166066 1166458 + 30S_ribosomal_protein_S9 ETE55_05900 QAU99853 1166376 1166597 - hypothetical_protein ETE55_05905 QAU99854 1166853 1167491 + stringent_starvation_protein_A ETE55_05910 QAU99855 1167497 1167994 + ClpXP_protease_specificity-enhancing_factor sspB QAU99856 1168037 1169404 - C4-dicarboxylate_transporter_DcuC dcuC QAU99857 1169784 1170575 + transcriptional_regulator_NanR ETE55_05925 QAU99858 1170697 1171590 + N-acetylneuraminate_lyase nanA QAU99859 1171699 1173189 + MFS_transporter ETE55_05935 QAU99860 1173237 1173926 + N-acetylmannosamine-6-phosphate_2-epimerase ETE55_05940 QAV03200 1173923 1174798 + N-acetylmannosamine_kinase ETE55_05945 QAU99861 1174795 1175259 + YhcH/YjgK/YiaL_family_protein ETE55_05950 QAU99862 1175335 1175640 - transposase ETE55_05955 QAU99863 1175657 1176136 - DUF1016_family_protein ETE55_05960 QAU99864 1176320 1177738 - glutamate_synthase ETE55_05965 QAU99865 1177751 1182211 - glutamate_synthase_large_subunit gltB QAU99866 1182886 1183815 + TIGR01212_family_radical_SAM_protein ETE55_05975 QAU99867 1183911 1186247 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QAU99868 1186477 1187130 + isoprenoid_biosynthesis_protein_ElbB elbB QAU99869 1187127 1187855 + monofunctional_biosynthetic_peptidoglycan transglycosylase ETE55_05990 QAU99870 1187852 1188484 - PhoP_regulatory_network_protein_YrbL yrbL QAU99871 1188698 1188970 - PTS_phosphocarrier_protein_NPr ETE55_06000 QAU99872 1188967 1189821 - RNase_adapter_RapZ rapZ QAU99873 1189867 1190358 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QAU99874 1190476 1190763 - ribosome_hibernation_promoting_factor ETE55_06015 QAU99875 1190786 1192219 - RNA_polymerase_factor_sigma-54 ETE55_06020 QAU99876 1192267 1192992 - lipopolysaccharide_ABC_transporter_ATP-binding protein ETE55_06025 QAU99877 1192999 1193556 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QAU99878 1193525 1194100 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QAU99879 1194097 1194663 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QAU99880 1194684 1195670 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 QAV03200 97 509 100.0 2e-179 PJR32597.1 QAU99860 99 456 100.0 1e-160 PJR32598.1 QAU99859 99 990 100.0 0.0 PJR32600.1 QAU99857 100 537 100.0 0.0 >> 335. CP035339_0 Source: Escherichia coli strain BR29-DEC chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2492 Table of genes, locations, strands and annotations of subject cluster: QAU93018 3615429 3615995 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QAU93019 3615992 3616567 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QAU93020 3616536 3617093 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QAU93021 3617100 3617825 + lipopolysaccharide_ABC_transporter_ATP-binding protein ETE47_18825 QAU93022 3617873 3619306 + RNA_polymerase_factor_sigma-54 ETE47_18830 QAU93023 3619329 3619616 + ribosome_hibernation_promoting_factor ETE47_18835 QAU93024 3619734 3620225 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QAU93025 3620271 3621125 + RNase_adapter_RapZ rapZ QAU93026 3621122 3621394 + PTS_phosphocarrier_protein_NPr ETE47_18850 QAU93027 3621608 3622240 + PhoP_regulatory_network_protein_YrbL yrbL QAU93028 3622237 3622965 - monofunctional_biosynthetic_peptidoglycan transglycosylase ETE47_18860 QAU93029 3622962 3623615 - isoprenoid_biosynthesis_protein_ElbB elbB QAU93030 3623845 3626181 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QAU93031 3626277 3627206 - TIGR01212_family_radical_SAM_protein ETE47_18875 QAU93032 3627881 3632341 + glutamate_synthase_large_subunit gltB QAU93033 3632354 3633772 + glutamate_synthase ETE47_18885 QAU93034 3633956 3634435 + DUF1016_family_protein ETE47_18890 QAU93035 3634452 3634757 + transposase ETE47_18895 QAU93036 3634833 3635297 - YhcH/YjgK/YiaL_family_protein ETE47_18900 QAU93037 3635294 3636169 - N-acetylmannosamine_kinase ETE47_18905 QAU93038 3636166 3636855 - N-acetylmannosamine-6-phosphate_2-epimerase ETE47_18910 QAU93039 3636903 3638393 - MFS_transporter ETE47_18915 QAU93040 3638502 3639395 - N-acetylneuraminate_lyase nanA QAU93041 3639517 3640308 - transcriptional_regulator_NanR ETE47_18925 QAU93042 3640688 3642055 + C4-dicarboxylate_transporter_DcuC dcuC QAU93043 3642098 3642595 - ClpXP_protease_specificity-enhancing_factor sspB QAU93044 3642601 3643239 - stringent_starvation_protein_A ETE47_18940 QAU93045 3643495 3643716 + hypothetical_protein ETE47_18945 QAU93046 3643634 3644026 - 30S_ribosomal_protein_S9 ETE47_18950 QAU93047 3644042 3644470 - 50S_ribosomal_protein_L13 ETE47_18955 QAU93048 3644689 3645816 - cell_division_protein_ZapE zapE QAU93049 3646010 3646408 + DUF1043_family_protein ETE47_18965 QAU93050 3646562 3647929 + serine_endoprotease_DegQ degQ QAU93051 3648019 3649086 + serine_endoprotease_DegS degS QAU93052 3649149 3650087 - malate_dehydrogenase ETE47_18980 QAU93053 3650522 3650992 + transcriptional_regulator_ArgR argR QAU93054 3651357 3651620 + peroxide/acid_stress_response_protein_YhcN yhcN QAU93055 3651676 3651948 - hypothetical_protein ETE47_18995 QAU93056 3652040 3654007 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QAU93057 3654013 3654945 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QAU93058 3654953 3655156 - DUF1656_domain-containing_protein ETE47_19010 QAU93059 3655339 3656268 + HTH-type_transcriptional_activator_AaeR aaeR QAU93060 3656402 3657847 - metalloprotease_TldD tldD QAU93061 3658277 3662077 - AsmA2_domain-containing_protein ETE47_19025 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 QAU93037 97 509 100.0 2e-179 PJR32597.1 QAU93038 99 456 100.0 1e-160 PJR32598.1 QAU93039 99 990 100.0 0.0 PJR32600.1 QAU93041 100 537 100.0 0.0 >> 336. CP035322_0 Source: Escherichia coli strain BR07-DEC chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2492 Table of genes, locations, strands and annotations of subject cluster: QAU63000 1684446 1685891 + metalloprotease_TldD tldD QAU63001 1686019 1686948 - HTH-type_transcriptional_activator_AaeR aaeR QAU63002 1687131 1687334 + DUF1656_domain-containing_protein ETE49_08640 QAU63003 1687342 1688274 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QAU63004 1688280 1690247 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QAU63005 1690339 1690611 + hypothetical_protein ETE49_08655 QAU63006 1690667 1690930 - peroxide/acid_stress_response_protein_YhcN yhcN QAU63007 1691295 1691765 - transcriptional_regulator_ArgR argR QAU63008 1692200 1693138 + malate_dehydrogenase ETE49_08670 QAU63009 1693201 1694268 - serine_endoprotease_DegS degS QAU63010 1694358 1695725 - serine_endoprotease_DegQ degQ QAU63011 1695879 1696277 - DUF1043_family_protein ETE49_08685 QAU63012 1696471 1697598 + cell_division_protein_ZapE zapE QAU63013 1697817 1698245 + 50S_ribosomal_protein_L13 ETE49_08695 QAU63014 1698261 1698653 + 30S_ribosomal_protein_S9 ETE49_08700 QAU63015 1698571 1698792 - hypothetical_protein ETE49_08705 QAU63016 1699048 1699686 + stringent_starvation_protein_A ETE49_08710 QAU63017 1699692 1700189 + ClpXP_protease_specificity-enhancing_factor sspB QAU63018 1700232 1701599 - C4-dicarboxylate_transporter_DcuC dcuC QAU63019 1701979 1702770 + transcriptional_regulator_NanR ETE49_08725 QAU63020 1702892 1703785 + N-acetylneuraminate_lyase nanA QAU63021 1703894 1705384 + MFS_transporter ETE49_08735 QAU63022 1705432 1706121 + N-acetylmannosamine-6-phosphate_2-epimerase ETE49_08740 QAU66049 1706118 1706993 + N-acetylmannosamine_kinase ETE49_08745 QAU63023 1706990 1707454 + YhcH/YjgK/YiaL_family_protein ETE49_08750 QAU63024 1707530 1707835 - transposase ETE49_08755 QAU63025 1707852 1708331 - DUF1016_family_protein ETE49_08760 QAU63026 1708515 1709933 - glutamate_synthase ETE49_08765 QAU63027 1709946 1714406 - glutamate_synthase_large_subunit gltB QAU63028 1715081 1716010 + TIGR01212_family_radical_SAM_protein ETE49_08775 QAU63029 1716106 1718442 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QAU63030 1718672 1719325 + isoprenoid_biosynthesis_protein_ElbB elbB QAU63031 1719322 1720050 + monofunctional_biosynthetic_peptidoglycan transglycosylase ETE49_08790 QAU63032 1720047 1720679 - PhoP_regulatory_network_protein_YrbL yrbL QAU63033 1720893 1721165 - PTS_phosphocarrier_protein_NPr ETE49_08800 QAU63034 1721162 1722016 - RNase_adapter_RapZ rapZ QAU63035 1722062 1722553 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QAU63036 1722671 1722958 - ribosome_hibernation_promoting_factor ETE49_08815 QAU63037 1722981 1724414 - RNA_polymerase_factor_sigma-54 ETE49_08820 QAU63038 1724462 1725187 - lipopolysaccharide_ABC_transporter_ATP-binding protein ETE49_08825 QAU63039 1725194 1725751 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QAU63040 1725720 1726295 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QAU63041 1726292 1726858 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QAU63042 1726879 1727865 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 QAU66049 97 509 100.0 2e-179 PJR32597.1 QAU63022 99 456 100.0 1e-160 PJR32598.1 QAU63021 99 990 100.0 0.0 PJR32600.1 QAU63019 100 537 100.0 0.0 >> 337. CP035321_0 Source: Escherichia coli strain BR03-DEC chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2492 Table of genes, locations, strands and annotations of subject cluster: QAU58322 1666959 1668404 + metalloprotease_TldD tldD QAU58323 1668532 1669461 - HTH-type_transcriptional_activator_AaeR aaeR QAU58324 1669644 1669847 + DUF1656_domain-containing_protein ETE48_08465 QAU58325 1669855 1670787 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QAU58326 1670793 1672760 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QAU58327 1672852 1673124 + hypothetical_protein ETE48_08480 QAU58328 1673180 1673443 - peroxide/acid_stress_response_protein_YhcN yhcN QAU58329 1673808 1674278 - transcriptional_regulator_ArgR argR QAU58330 1674713 1675651 + malate_dehydrogenase ETE48_08495 QAU58331 1675714 1676781 - serine_endoprotease_DegS degS QAU58332 1676871 1678238 - serine_endoprotease_DegQ degQ QAU58333 1678392 1678790 - DUF1043_family_protein ETE48_08510 QAU58334 1678984 1680111 + cell_division_protein_ZapE zapE QAU58335 1680330 1680758 + 50S_ribosomal_protein_L13 ETE48_08520 QAU58336 1680774 1681166 + 30S_ribosomal_protein_S9 ETE48_08525 QAU58337 1681084 1681305 - hypothetical_protein ETE48_08530 QAU58338 1681561 1682199 + stringent_starvation_protein_A ETE48_08535 QAU58339 1682205 1682702 + ClpXP_protease_specificity-enhancing_factor sspB QAU58340 1682745 1684112 - C4-dicarboxylate_transporter_DcuC dcuC QAU58341 1684492 1685283 + transcriptional_regulator_NanR ETE48_08550 QAU58342 1685405 1686298 + N-acetylneuraminate_lyase nanA QAU58343 1686407 1687897 + MFS_transporter ETE48_08560 QAU58344 1687945 1688634 + N-acetylmannosamine-6-phosphate_2-epimerase ETE48_08565 QAU61352 1688631 1689506 + N-acetylmannosamine_kinase ETE48_08570 QAU58345 1689503 1689967 + YhcH/YjgK/YiaL_family_protein ETE48_08575 QAU58346 1690043 1690348 - transposase ETE48_08580 QAU58347 1690365 1690844 - DUF1016_family_protein ETE48_08585 QAU58348 1691028 1692446 - glutamate_synthase ETE48_08590 QAU58349 1692459 1696919 - glutamate_synthase_large_subunit gltB QAU58350 1697594 1698523 + TIGR01212_family_radical_SAM_protein ETE48_08600 QAU58351 1698619 1700955 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QAU58352 1701185 1701838 + isoprenoid_biosynthesis_protein_ElbB elbB QAU58353 1701835 1702563 + monofunctional_biosynthetic_peptidoglycan transglycosylase ETE48_08615 QAU58354 1702560 1703192 - PhoP_regulatory_network_protein_YrbL yrbL QAU58355 1703406 1703678 - PTS_phosphocarrier_protein_NPr ETE48_08625 QAU58356 1703675 1704529 - RNase_adapter_RapZ rapZ QAU58357 1704575 1705066 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QAU58358 1705184 1705471 - ribosome_hibernation_promoting_factor ETE48_08640 QAU58359 1705494 1706927 - RNA_polymerase_factor_sigma-54 ETE48_08645 QAU58360 1706975 1707700 - lipopolysaccharide_ABC_transporter_ATP-binding protein ETE48_08650 QAU58361 1707707 1708264 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QAU58362 1708233 1708808 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QAU58363 1708805 1709371 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QAU58364 1709392 1710378 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 QAU61352 97 509 100.0 2e-179 PJR32597.1 QAU58344 99 456 100.0 1e-160 PJR32598.1 QAU58343 99 990 100.0 0.0 PJR32600.1 QAU58341 100 537 100.0 0.0 >> 338. CP035320_0 Source: Escherichia coli strain BR02-DEC chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2492 Table of genes, locations, strands and annotations of subject cluster: QAU78792 3740980 3741546 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QAU78793 3741543 3742118 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QAU78794 3742087 3742644 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QAU78795 3742651 3743376 + lipopolysaccharide_ABC_transporter_ATP-binding protein EK474_18600 QAU78796 3743424 3744857 + RNA_polymerase_factor_sigma-54 EK474_18605 QAU78797 3744880 3745167 + ribosome_hibernation_promoting_factor EK474_18610 QAU78798 3745285 3745776 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QAU78799 3745822 3746676 + RNase_adapter_RapZ rapZ QAU78800 3746673 3746945 + PTS_phosphocarrier_protein_NPr EK474_18625 QAU78801 3747159 3747791 + PhoP_regulatory_network_protein_YrbL yrbL QAU78802 3747788 3748516 - monofunctional_biosynthetic_peptidoglycan transglycosylase EK474_18635 QAU78803 3748513 3749166 - isoprenoid_biosynthesis_protein_ElbB elbB QAU78804 3749396 3751732 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QAU78805 3751828 3752757 - TIGR01212_family_radical_SAM_protein EK474_18650 QAU78806 3753432 3757892 + glutamate_synthase_large_subunit gltB QAU78807 3757905 3759323 + glutamate_synthase EK474_18660 QAU78808 3759507 3759986 + DUF1016_family_protein EK474_18665 QAU78809 3760003 3760308 + transposase EK474_18670 QAU78810 3760384 3760848 - YhcH/YjgK/YiaL_family_protein EK474_18675 QAU78811 3760845 3761720 - N-acetylmannosamine_kinase EK474_18680 QAU78812 3761717 3762406 - N-acetylmannosamine-6-phosphate_2-epimerase EK474_18685 QAU78813 3762454 3763944 - MFS_transporter EK474_18690 QAU78814 3764053 3764946 - N-acetylneuraminate_lyase nanA QAU78815 3765068 3765859 - transcriptional_regulator_NanR EK474_18700 QAU78816 3766239 3767606 + C4-dicarboxylate_transporter_DcuC dcuC QAU78817 3767649 3768146 - ClpXP_protease_specificity-enhancing_factor sspB QAU78818 3768152 3768790 - stringent_starvation_protein_A EK474_18715 QAU78819 3769046 3769267 + hypothetical_protein EK474_18720 QAU78820 3769185 3769577 - 30S_ribosomal_protein_S9 EK474_18725 QAU78821 3769593 3770021 - 50S_ribosomal_protein_L13 EK474_18730 QAU78822 3770240 3771367 - cell_division_protein_ZapE zapE QAU78823 3771561 3771959 + DUF1043_family_protein EK474_18740 QAU78824 3772113 3773480 + serine_endoprotease_DegQ degQ QAU78825 3773570 3774637 + serine_endoprotease_DegS degS QAU78826 3774700 3775638 - malate_dehydrogenase EK474_18755 QAU78827 3776073 3776543 + transcriptional_regulator_ArgR argR QAU78828 3776908 3777171 + peroxide/acid_stress_response_protein_YhcN yhcN QAU78829 3777227 3777499 - hypothetical_protein EK474_18770 QAU78830 3777591 3779558 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QAU78831 3779564 3780496 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QAU78832 3780504 3780707 - DUF1656_domain-containing_protein EK474_18785 QAU78833 3780890 3781819 + HTH-type_transcriptional_activator_AaeR aaeR QAU78834 3781947 3783392 - metalloprotease_TldD tldD QAU78835 3783548 3787348 - AsmA2_domain-containing_protein EK474_18800 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 QAU78811 97 509 100.0 2e-179 PJR32597.1 QAU78812 99 456 100.0 1e-160 PJR32598.1 QAU78813 99 990 100.0 0.0 PJR32600.1 QAU78815 100 537 100.0 0.0 >> 339. CP010229_0 Source: Escherichia coli strain S10 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2492 Table of genes, locations, strands and annotations of subject cluster: APL51859 2097334 2098779 + protease_TldD tldD APL51860 2098907 2099836 - transcriptional_regulator RG66_10280 APL54474 2100019 2100222 + transporter RG66_10285 APL51861 2100230 2101162 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG66_10290 APL51862 2101168 2103135 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG66_10295 APL51863 2103227 2103499 + hypothetical_protein RG66_10300 APL51864 2103555 2103818 - membrane_protein RG66_10305 APL51865 2104183 2104653 - arginine_repressor RG66_10310 APL51866 2105088 2106026 + malate_dehydrogenase RG66_10315 APL51867 2106089 2107156 - serine_endoprotease RG66_10320 APL51868 2107246 2108613 - serine_endoprotease_DegQ RG66_10325 APL51869 2108767 2109165 - hypothetical_protein RG66_10330 APL51870 2109359 2110486 + hypothetical_protein RG66_10335 APL51871 2110705 2111133 + 50S_ribosomal_protein_L13 RG66_10340 APL51872 2111149 2111541 + 30S_ribosomal_protein_S9 RG66_10345 APL51873 2111936 2112574 + stringent_starvation_protein_A sspA APL51874 2112580 2113077 + Clp_protease_ClpP RG66_10355 APL51875 2113120 2114487 - C4-dicarboxylate_transporter RG66_10360 APL51876 2114867 2115658 + transcriptional_regulator_NanR RG66_10365 APL51877 2115780 2116673 + N-acetylneuraminate_lyase RG66_10370 APL51878 2116782 2118272 + sialic_acid_transporter RG66_10375 APL51879 2118320 2119009 + N-acetylmannosamine-6-phosphate_2-epimerase RG66_10380 APL51880 2119006 2119881 + N-acetylmannosamine_kinase RG66_10385 APL51881 2119878 2120342 + hypothetical_protein RG66_10390 APL51882 2120418 2120723 - transposase RG66_10395 APL51883 2121403 2122821 - glutamate_synthase RG66_10405 APL54475 2122834 2127294 - glutamate_synthase gltB APL54476 2127969 2128898 + hypothetical_protein RG66_10415 APL51884 2128994 2131330 + aerobic_respiration_control_sensor_protein_ArcB RG66_10420 APL51885 2131560 2132213 + isoprenoid_biosynthesis_protein RG66_10425 APL51886 2132210 2132938 + peptidoglycan_transglycosylase mtgA APL51887 2132935 2133567 - hypothetical_protein RG66_10435 APL51888 2133781 2134053 - phosphohistidinoprotein-hexose phosphotransferase RG66_10440 APL51889 2134050 2134904 - glmZ(sRNA)-inactivating_NTPase RG66_10445 APL51890 2134950 2135441 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG66_10450 APL51891 2135559 2135846 - ribosome_hibernation_promoting_factor_HPF RG66_10455 APL51892 2135869 2137302 - RNA_polymerase_factor_sigma-54 RG66_10460 APL51893 2137350 2138075 - sugar_ABC_transporter_ATP-binding_protein RG66_10465 APL51894 2138082 2138639 - lipopolysaccharide_transporter RG66_10470 APL51895 2138608 2139183 - lipopolysaccharide_transporter RG66_10475 APL51896 2139180 2139746 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG66_10480 APL51897 2139767 2140753 - D-arabinose_5-phosphate_isomerase RG66_10485 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 APL51880 97 509 100.0 2e-179 PJR32597.1 APL51879 99 456 100.0 1e-160 PJR32598.1 APL51878 99 990 100.0 0.0 PJR32600.1 APL51876 100 537 100.0 0.0 >> 340. CP010150_0 Source: Escherichia coli strain D7, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2492 Table of genes, locations, strands and annotations of subject cluster: APK30405 2844062 2845507 + protease_TldD tldD APK30406 2845641 2846570 - transcriptional_regulator RG40_14125 APK32293 2846753 2846956 + transporter RG40_14130 APK30407 2846964 2847896 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG40_14135 APK30408 2847902 2849869 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG40_14140 APK30409 2849961 2850233 + hypothetical_protein RG40_14145 APK30410 2850289 2850552 - membrane_protein RG40_14150 APK30411 2850917 2851387 - arginine_repressor RG40_14155 APK30412 2851822 2852760 + malate_dehydrogenase RG40_14160 APK30413 2852823 2853890 - serine_endoprotease RG40_14165 APK30414 2853980 2855347 - serine_endoprotease_DegQ RG40_14170 APK30415 2855501 2855899 - hypothetical_protein RG40_14175 APK30416 2856093 2857220 + hypothetical_protein RG40_14180 APK30417 2857439 2857867 + 50S_ribosomal_protein_L13 RG40_14185 APK30418 2857883 2858275 + 30S_ribosomal_protein_S9 RG40_14190 APK30419 2858670 2859308 + stringent_starvation_protein_A sspA APK30420 2859314 2859811 + Clp_protease_ClpP RG40_14200 APK30421 2859854 2861221 - C4-dicarboxylate_transporter RG40_14205 APK30422 2861601 2862392 + transcriptional_regulator_NanR RG40_14210 APK30423 2862514 2863407 + N-acetylneuraminate_lyase RG40_14215 APK30424 2863516 2865006 + sialic_acid_transporter RG40_14220 APK30425 2865054 2865743 + N-acetylmannosamine-6-phosphate_2-epimerase RG40_14225 APK30426 2865740 2866615 + N-acetylmannosamine_kinase RG40_14230 APK30427 2866612 2867076 + hypothetical_protein RG40_14235 APK30428 2867152 2867457 - transposase RG40_14240 APK30429 2868137 2869555 - glutamate_synthase RG40_14250 APK32294 2869568 2874028 - glutamate_synthase gltB APK32295 2874703 2875632 + hypothetical_protein RG40_14260 APK30430 2875728 2878064 + aerobic_respiration_control_sensor_protein_ArcB RG40_14265 APK30431 2878294 2878947 + isoprenoid_biosynthesis_protein RG40_14270 APK30432 2878944 2879672 + peptidoglycan_transglycosylase mtgA APK30433 2879669 2880301 - hypothetical_protein RG40_14280 APK30434 2880515 2880787 - phosphohistidinoprotein-hexose phosphotransferase RG40_14285 APK30435 2880784 2881638 - glmZ(sRNA)-inactivating_NTPase RG40_14290 APK30436 2881684 2882175 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG40_14295 APK30437 2882293 2882580 - ribosome_hibernation_promoting_factor_HPF RG40_14300 APK30438 2882603 2884036 - RNA_polymerase_factor_sigma-54 RG40_14305 APK30439 2884084 2884809 - sugar_ABC_transporter_ATP-binding_protein RG40_14310 APK30440 2884816 2885373 - lipopolysaccharide_transporter RG40_14315 APK30441 2885342 2885917 - lipopolysaccharide_transporter RG40_14320 APK30442 2885914 2886480 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG40_14325 APK30443 2886501 2887487 - D-arabinose_5-phosphate_isomerase RG40_14330 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 APK30426 97 509 100.0 2e-179 PJR32597.1 APK30425 99 456 100.0 1e-160 PJR32598.1 APK30424 99 990 100.0 0.0 PJR32600.1 APK30422 100 537 100.0 0.0 >> 341. CP010148_0 Source: Escherichia coli strain D6, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2492 Table of genes, locations, strands and annotations of subject cluster: APK25549 2627018 2628463 + protease_TldD tldD APK25550 2628591 2629520 - transcriptional_regulator RG39_12890 APK27516 2629703 2629906 + transporter RG39_12895 APK25551 2629914 2630846 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG39_12900 APK25552 2630852 2632819 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG39_12905 APK25553 2632911 2633183 + hypothetical_protein RG39_12910 APK25554 2633239 2633502 - membrane_protein RG39_12915 APK25555 2633867 2634337 - arginine_repressor RG39_12920 APK25556 2634772 2635710 + malate_dehydrogenase RG39_12925 APK25557 2635773 2636840 - serine_endoprotease RG39_12930 APK25558 2636930 2638297 - serine_endoprotease_DegQ RG39_12935 APK25559 2638451 2638849 - hypothetical_protein RG39_12940 APK25560 2639043 2640170 + hypothetical_protein RG39_12945 APK25561 2640389 2640817 + 50S_ribosomal_protein_L13 RG39_12950 APK25562 2640833 2641225 + 30S_ribosomal_protein_S9 RG39_12955 APK25563 2641620 2642258 + stringent_starvation_protein_A sspA APK25564 2642264 2642761 + Clp_protease_ClpP RG39_12965 APK25565 2642804 2644171 - C4-dicarboxylate_transporter RG39_12970 APK25566 2644551 2645342 + transcriptional_regulator_NanR RG39_12975 APK25567 2645464 2646357 + N-acetylneuraminate_lyase RG39_12980 APK25568 2646466 2647956 + sialic_acid_transporter RG39_12985 APK25569 2648004 2648693 + N-acetylmannosamine-6-phosphate_2-epimerase RG39_12990 APK25570 2648690 2649565 + N-acetylmannosamine_kinase RG39_12995 APK25571 2649562 2650026 + hypothetical_protein RG39_13000 APK25572 2650102 2650407 - transposase RG39_13005 APK25573 2651087 2652505 - glutamate_synthase RG39_13015 APK27517 2652518 2656978 - glutamate_synthase gltB APK27518 2657653 2658582 + hypothetical_protein RG39_13025 APK25574 2658678 2661014 + aerobic_respiration_control_sensor_protein_ArcB RG39_13030 APK25575 2661244 2661897 + isoprenoid_biosynthesis_protein RG39_13035 APK25576 2661894 2662622 + peptidoglycan_transglycosylase mtgA APK25577 2662619 2663251 - hypothetical_protein RG39_13045 APK25578 2663465 2663737 - phosphohistidinoprotein-hexose phosphotransferase RG39_13050 APK25579 2663734 2664588 - glmZ(sRNA)-inactivating_NTPase RG39_13055 APK25580 2664634 2665125 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG39_13060 APK25581 2665243 2665530 - ribosome_hibernation_promoting_factor_HPF RG39_13065 APK25582 2665553 2666986 - RNA_polymerase_factor_sigma-54 RG39_13070 APK25583 2667034 2667759 - sugar_ABC_transporter_ATP-binding_protein RG39_13075 APK25584 2667766 2668323 - lipopolysaccharide_transporter RG39_13080 APK25585 2668292 2668867 - lipopolysaccharide_transporter RG39_13085 APK25586 2668864 2669430 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG39_13090 APK25587 2669451 2670437 - D-arabinose_5-phosphate_isomerase RG39_13095 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 APK25570 97 509 100.0 2e-179 PJR32597.1 APK25569 99 456 100.0 1e-160 PJR32598.1 APK25568 99 990 100.0 0.0 PJR32600.1 APK25566 100 537 100.0 0.0 >> 342. LR025096_0 Source: Escherichia coli isolate EC-7215 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2490 Table of genes, locations, strands and annotations of subject cluster: VAX90861 4292407 4292973 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC VAX90862 4292970 4293545 + Lipopolysaccharide_export_system_protein_LptC lptC VAX90863 4293514 4294071 + Lipopolysaccharide_export_system_protein_LptA precursor lptA VAX90864 4294078 4294803 + Lipopolysaccharide_export_system_ATP-binding protein LptB lptB_1 VAX90865 4294851 4296284 + RNA_polymerase_sigma-54_factor_1 rpoN1 VAX90866 4296307 4296594 + Ribosome_hibernation_promoting_factor hpf VAX90867 4296712 4297203 + Nitrogen_regulatory_protein ptsN VAX90868 4297249 4298103 + glmZ(sRNA)-inactivating_NTPase EC7215_04474 VAX90869 4298100 4298372 + Phosphocarrier_protein_NPr ptsO VAX90870 4298586 4299218 + PhoP_regulatory_network_protein_YrbL EC7215_04476 VAX90871 4299215 4299943 - Penicillin-binding_protein_2D pbpG_2 VAX90872 4299940 4300593 - Sigma_cross-reacting_protein_27A elbB VAX90873 4300823 4303159 - Aerobic_respiration_control_sensor_protein_ArcB arcB VAX90874 4303255 4304184 - coproporphyrinogen_III_oxidase EC7215_04481 VAX90875 4304766 4309319 + Glutamate_synthase_[NADPH]_large_chain precursor gltB VAX90876 4309332 4310750 + Glutamate_synthase_[NADPH]_small_chain gltD_4 VAX90877 4310934 4311413 + Uncharacterised_protein EC7215_04484 VAX90878 4311430 4311735 + Uncharacterised_protein EC7215_04485 VAX90879 4311811 4312275 - Toxin-antitoxin_biofilm_protein_TabA tabA_2 VAX90880 4312272 4313147 - N-acetylmannosamine_kinase nanK VAX90881 4313144 4313833 - Putative_N-acetylmannosamine-6-phosphate 2-epimerase nanE VAX90882 4313881 4315371 - Sialic_acid_permease nanT_2 VAX90883 4315480 4316373 - N-acetylneuraminate_lyase nanA VAX90884 4316495 4317286 - L-lactate_utilization_operon_repressor lutR_1 VAX90885 4317666 4319033 + Putative_cryptic_C4-dicarboxylate_transporter DcuD dcuD_2 VAX90886 4319076 4319573 - Stringent_starvation_protein_B sspB VAX90887 4319579 4320217 - Stringent_starvation_protein_A sspA VAX90888 4320612 4321004 - 30S_ribosomal_protein_S9 rpsI VAX90889 4321020 4321448 - 50S_ribosomal_protein_L13 rplM VAX90890 4321667 4322794 - AFG1-like_ATPase EC7215_04497 VAX90891 4322988 4323386 + Putative_cytochrome_d_ubiquinol_oxidase_subunit 3 yhcB VAX90892 4323540 4324907 + Periplasmic_pH-dependent_serine_endoprotease DegQ precursor degQ VAX90893 4324997 4326064 + Serine_endoprotease_DegS_precursor degS VAX90894 4326127 4327065 - Malate_dehydrogenase mdh VAX90895 4327500 4327970 + Arginine_repressor argR VAX90896 4328335 4328598 + Copper-induced_outer_membrane_component bhsA_4 VAX90897 4328654 4328926 - Barstar_(barnase_inhibitor) EC7215_04504 VAX90898 4329018 4330985 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB_2 VAX90899 4330991 4331923 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA_2 VAX90900 4331931 4332134 - efflux_system_membrane_protein EC7215_04507 VAX90901 4332317 4333246 + D-malate_degradation_protein_R dmlR_7 VAX90902 4333374 4334819 - protease_TldD EC7215_04509 VAX90903 4334975 4338775 - putative_protein_involved_in_outer_membrane biogenesis EC7215_04510 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 VAX90880 97 507 100.0 9e-179 PJR32597.1 VAX90881 99 456 100.0 1e-160 PJR32598.1 VAX90882 99 990 100.0 0.0 PJR32600.1 VAX90884 100 537 100.0 0.0 >> 343. CP031134_0 Source: Escherichia coli strain CFSAN064035 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2490 Table of genes, locations, strands and annotations of subject cluster: AXG17639 2249231 2250676 + metalloprotease_TldD C6669_11750 AXG17640 2250804 2251733 - HTH-type_transcriptional_activator_AaeR C6669_11755 AXG17641 2251916 2252119 + protein_AaeX C6669_11760 AXG17642 2252127 2253059 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C6669_11765 AXG17643 2253065 2255032 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C6669_11770 AXG17644 2255124 2255396 + hypothetical_protein C6669_11775 AXG17645 2255452 2255715 - DUF1471_domain-containing_protein C6669_11780 AXG17646 2256080 2256550 - transcriptional_regulator_ArgR C6669_11785 AXG17647 2256985 2257923 + malate_dehydrogenase C6669_11790 AXG17648 2257986 2259053 - outer_membrane-stress_sensor_serine endopeptidase DegS C6669_11795 AXG17649 2259143 2260510 - periplasmic_pH-dependent_serine_endoprotease DegQ C6669_11800 AXG17650 2260664 2261062 - DUF1043_family_protein C6669_11805 AXG17651 2261256 2262383 + cell_division_protein_ZapE C6669_11810 AXG17652 2262602 2263030 + 50S_ribosomal_protein_L13 C6669_11815 AXG17653 2263046 2263438 + 30S_ribosomal_protein_S9 C6669_11820 AXG17654 2263356 2263577 - hypothetical_protein C6669_11825 AXG20188 2263551 2263730 + hypothetical_protein C6669_11830 AXG20187 2263682 2263891 - hypothetical_protein C6669_11835 AXG17655 2263833 2264471 + stringent_starvation_protein_A C6669_11840 AXG17656 2264477 2264974 + stringent_starvation_protein_B C6669_11845 AXG17657 2265017 2266384 - C4-dicarboxylate_transporter_DcuC C6669_11850 C6669_11855 2266384 2266494 + transposase no_locus_tag AXG17658 2266764 2267555 + transcriptional_regulator_NanR C6669_11860 AXG17659 2267677 2268570 + N-acetylneuraminate_lyase nanA AXG17660 2268679 2270169 + MFS_transporter C6669_11870 AXG17661 2270217 2270906 + N-acetylmannosamine-6-phosphate_2-epimerase C6669_11875 AXG17662 2270903 2271778 + ROK_family_protein C6669_11880 AXG17663 2271775 2272239 + YhcH/YjgK/YiaL_family_protein C6669_11885 AXG17664 2272315 2272620 - transposase C6669_11890 AXG17665 2272637 2273116 - DUF1016_family_protein C6669_11895 AXG17666 2273300 2274718 - glutamate_synthase C6669_11900 AXG17667 2274731 2279191 - glutamate_synthase_large_subunit C6669_11905 C6669_11910 2279114 2279340 + hypothetical_protein no_locus_tag AXG17668 2279238 2279474 + hypothetical_protein C6669_11915 AXG20189 2279866 2280795 + TIGR01212_family_radical_SAM_protein C6669_11920 AXG17669 2280891 2283227 + hybrid_sensor_histidine_kinase/response regulator C6669_11925 AXG17670 2283457 2284110 + isoprenoid_biosynthesis_protein_ElbB C6669_11930 AXG17671 2284107 2284835 + monofunctional_biosynthetic_peptidoglycan transglycosylase C6669_11935 AXG17672 2284832 2285464 - PhoP_regulatory_network_protein_YrbL C6669_11940 AXG17673 2285678 2285950 - phosphocarrier_protein_NPr C6669_11945 AXG17674 2285947 2286801 - RNase_adaptor_protein_RapZ C6669_11950 AXG17675 2286847 2287338 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C6669_11955 AXG17676 2287456 2287743 - ribosome_hibernation_promoting_factor C6669_11960 AXG17677 2287766 2289199 - RNA_polymerase_sigma-54_factor C6669_11965 AXG17678 2289247 2289972 - ABC_transporter_ATP-binding_protein C6669_11970 AXG17679 2289979 2290536 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C6669_11975 AXG17680 2290505 2291080 - LPS_export_ABC_transporter_periplasmic_protein LptC C6669_11980 AXG17681 2291077 2291643 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC C6669_11985 AXG17682 2291664 2292650 - arabinose_5-phosphate_isomerase_KdsD C6669_11990 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AXG17662 97 507 100.0 9e-179 PJR32597.1 AXG17661 99 456 100.0 1e-160 PJR32598.1 AXG17660 99 990 100.0 0.0 PJR32600.1 AXG17658 100 537 100.0 0.0 >> 344. CP028432_0 Source: Escherichia coli strain RM9975 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2490 Table of genes, locations, strands and annotations of subject cluster: AWZ59043 3880064 3880639 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AWZ59044 3880608 3881165 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA ECRM9975_20795 AWZ59045 3881172 3881897 + ABC_transporter_ATP-binding_protein ECRM9975_20800 AWZ59046 3881945 3883378 + RNA_polymerase_sigma-54_factor ECRM9975_20805 AWZ59047 3883401 3883688 + ribosome_hibernation_promoting_factor ECRM9975_20810 AWZ59048 3883806 3884297 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ECRM9975_20815 AWZ59049 3884343 3885197 + RNase_adaptor_protein_RapZ ECRM9975_20820 AWZ59050 3885194 3885466 + phosphocarrier_protein_NPr ECRM9975_20825 AWZ59051 3885680 3886312 + protein_YrbL yrbL AWZ59052 3886309 3887037 - monofunctional_biosynthetic_peptidoglycan transglycosylase ECRM9975_20835 AWZ59053 3887034 3887687 - glutamine_amidotransferase ECRM9975_20840 AWZ59054 3887917 3890253 - hybrid_sensor_histidine_kinase/response regulator ECRM9975_20845 AWZ60442 3890349 3891278 - TIGR01212_family_radical_SAM_protein ECRM9975_20850 AWZ59055 3891670 3891906 - hypothetical_protein ECRM9975_20855 ECRM9975_20860 3891804 3892030 - hypothetical_protein no_locus_tag AWZ59056 3891953 3896413 + glutamate_synthase_large_subunit ECRM9975_20865 AWZ59057 3896426 3897844 + glutamate_synthase_small_subunit ECRM9975_20870 ECRM9975_20875 3898028 3899075 + DUF1016_domain-containing_protein no_locus_tag AWZ59058 3899135 3899599 - YhcH/YjgK/YiaL_family_protein ECRM9975_20880 AWZ59059 3899596 3900471 - N-acetylmannosamine_kinase ECRM9975_20885 AWZ59060 3900468 3901157 - N-acetylmannosamine-6-phosphate_2-epimerase ECRM9975_20890 AWZ59061 3901205 3902695 - MFS_transporter ECRM9975_20895 AWZ59062 3902805 3903698 - N-acetylneuraminate_lyase nanA AWZ59063 3903820 3904611 - transcriptional_regulator_NanR nanR ECRM9975_20910 3904881 3904991 - transposase no_locus_tag AWZ59064 3904991 3906358 + C4-dicarboxylate_transporter ECRM9975_20915 AWZ59065 3906401 3906898 - stringent_starvation_protein_B ECRM9975_20920 AWZ59066 3906904 3907542 - stringent_starvation_protein_A ECRM9975_20925 AWZ59067 3907484 3907693 + hypothetical_protein ECRM9975_20930 AWZ60443 3907645 3907824 - hypothetical_protein ECRM9975_20935 AWZ59068 3907798 3908019 + hypothetical_protein ECRM9975_20940 AWZ59069 3907937 3908329 - 30S_ribosomal_protein_S9 ECRM9975_20945 AWZ59070 3908345 3908773 - 50S_ribosomal_protein_L13 ECRM9975_20950 AWZ59071 3908992 3910119 - cell_division_protein_ZapE ECRM9975_20955 AWZ59072 3910313 3910711 + hypothetical_protein ECRM9975_20960 AWZ59073 3910865 3912232 + periplasmic_pH-dependent_serine_endoprotease DegQ ECRM9975_20965 AWZ59074 3912322 3913389 + outer_membrane-stress_sensor_serine endopeptidase DegS ECRM9975_20970 AWZ59075 3913452 3914390 - malate_dehydrogenase ECRM9975_20975 AWZ59076 3914825 3915295 + arginine_repressor ECRM9975_20980 AWZ59077 3915660 3915923 + DUF1471_domain-containing_protein ECRM9975_20985 AWZ59078 3915979 3916251 - hypothetical_protein ECRM9975_20990 AWZ59079 3916343 3918310 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB ECRM9975_20995 AWZ59080 3918316 3919248 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA ECRM9975_21000 AWZ59081 3919256 3919459 - protein_AaeX ECRM9975_21005 AWZ59082 3919642 3920571 + HTH-type_transcriptional_activator_AaeR ECRM9975_21010 AWZ59083 3920699 3922144 - metalloprotease_TldD ECRM9975_21015 AWZ59084 3922300 3926100 - AsmA2_domain-containing_protein ECRM9975_21020 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AWZ59059 97 508 100.0 5e-179 PJR32597.1 AWZ59060 99 456 100.0 1e-160 PJR32598.1 AWZ59061 99 990 100.0 0.0 PJR32600.1 AWZ59063 99 536 100.0 0.0 >> 345. CP028429_0 Source: Escherichia coli strain RM9131 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2490 Table of genes, locations, strands and annotations of subject cluster: AWZ53738 3885362 3885937 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AWZ53739 3885906 3886463 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA ECRM9131_20820 AWZ53740 3886470 3887195 + ABC_transporter_ATP-binding_protein ECRM9131_20825 AWZ53741 3887243 3888676 + RNA_polymerase_sigma-54_factor ECRM9131_20830 AWZ53742 3888699 3888986 + ribosome_hibernation_promoting_factor ECRM9131_20835 AWZ53743 3889104 3889595 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ECRM9131_20840 AWZ53744 3889641 3890495 + RNase_adaptor_protein_RapZ ECRM9131_20845 AWZ53745 3890492 3890764 + phosphocarrier_protein_NPr ECRM9131_20850 AWZ53746 3890978 3891610 + protein_YrbL yrbL AWZ53747 3891607 3892335 - monofunctional_biosynthetic_peptidoglycan transglycosylase ECRM9131_20860 AWZ53748 3892332 3892985 - glutamine_amidotransferase ECRM9131_20865 AWZ53749 3893215 3895551 - hybrid_sensor_histidine_kinase/response regulator ECRM9131_20870 AWZ55137 3895647 3896576 - TIGR01212_family_radical_SAM_protein ECRM9131_20875 AWZ53750 3896968 3897204 - hypothetical_protein ECRM9131_20880 ECRM9131_20885 3897102 3897328 - hypothetical_protein no_locus_tag AWZ53751 3897251 3901711 + glutamate_synthase_large_subunit ECRM9131_20890 AWZ53752 3901724 3903142 + glutamate_synthase_small_subunit ECRM9131_20895 ECRM9131_20900 3903326 3904373 + DUF1016_domain-containing_protein no_locus_tag AWZ53753 3904433 3904897 - YhcH/YjgK/YiaL_family_protein ECRM9131_20905 AWZ53754 3904894 3905769 - N-acetylmannosamine_kinase ECRM9131_20910 AWZ53755 3905766 3906455 - N-acetylmannosamine-6-phosphate_2-epimerase ECRM9131_20915 AWZ53756 3906503 3907993 - MFS_transporter ECRM9131_20920 AWZ53757 3908103 3908996 - N-acetylneuraminate_lyase nanA AWZ53758 3909118 3909909 - transcriptional_regulator_NanR nanR ECRM9131_20935 3910179 3910289 - transposase no_locus_tag AWZ53759 3910289 3911656 + C4-dicarboxylate_transporter ECRM9131_20940 AWZ53760 3911699 3912196 - stringent_starvation_protein_B ECRM9131_20945 AWZ53761 3912202 3912840 - stringent_starvation_protein_A ECRM9131_20950 AWZ53762 3912782 3912991 + hypothetical_protein ECRM9131_20955 AWZ55138 3912943 3913122 - hypothetical_protein ECRM9131_20960 AWZ53763 3913096 3913317 + hypothetical_protein ECRM9131_20965 AWZ53764 3913235 3913627 - 30S_ribosomal_protein_S9 ECRM9131_20970 AWZ53765 3913643 3914071 - 50S_ribosomal_protein_L13 ECRM9131_20975 AWZ53766 3914290 3915417 - cell_division_protein_ZapE ECRM9131_20980 AWZ53767 3915611 3916009 + hypothetical_protein ECRM9131_20985 AWZ53768 3916163 3917530 + periplasmic_pH-dependent_serine_endoprotease DegQ ECRM9131_20990 AWZ53769 3917620 3918687 + outer_membrane-stress_sensor_serine endopeptidase DegS ECRM9131_20995 AWZ53770 3918750 3919688 - malate_dehydrogenase ECRM9131_21000 AWZ53771 3920123 3920593 + arginine_repressor ECRM9131_21005 AWZ53772 3920958 3921221 + DUF1471_domain-containing_protein ECRM9131_21010 AWZ53773 3921277 3921549 - hypothetical_protein ECRM9131_21015 AWZ53774 3921641 3923608 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB ECRM9131_21020 AWZ53775 3923614 3924546 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA ECRM9131_21025 AWZ53776 3924554 3924757 - protein_AaeX ECRM9131_21030 AWZ53777 3924940 3925869 + HTH-type_transcriptional_activator_AaeR ECRM9131_21035 AWZ53778 3925997 3927442 - metalloprotease_TldD ECRM9131_21040 AWZ53779 3927598 3931398 - AsmA2_domain-containing_protein ECRM9131_21045 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AWZ53754 97 508 100.0 5e-179 PJR32597.1 AWZ53755 99 456 100.0 1e-160 PJR32598.1 AWZ53756 99 990 100.0 0.0 PJR32600.1 AWZ53758 99 536 100.0 0.0 >> 346. CP028117_0 Source: Escherichia coli O111 str. RM9322 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2490 Table of genes, locations, strands and annotations of subject cluster: AWJ45488 3840627 3841202 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AWJ45489 3841171 3841728 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA I3O_20555 AWJ45490 3841735 3842460 + ABC_transporter_ATP-binding_protein I3O_20560 AWJ45491 3842508 3843941 + RNA_polymerase_sigma-54_factor I3O_20565 AWJ45492 3843964 3844251 + ribosome_hibernation_promoting_factor I3O_20570 AWJ45493 3844369 3844860 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN I3O_20575 AWJ45494 3844906 3845760 + RNase_adaptor_protein_RapZ I3O_20580 AWJ45495 3845757 3846029 + phosphocarrier_protein_NPr I3O_20585 AWJ45496 3846243 3846875 + protein_YrbL yrbL AWJ45497 3846872 3847600 - monofunctional_biosynthetic_peptidoglycan transglycosylase I3O_20595 AWJ45498 3847597 3848250 - glutamine_amidotransferase I3O_20600 AWJ45499 3848480 3850816 - hybrid_sensor_histidine_kinase/response regulator I3O_20605 AWJ46894 3850912 3851841 - TIGR01212_family_radical_SAM_protein I3O_20610 AWJ45500 3852233 3852469 - hypothetical_protein I3O_20615 I3O_20620 3852367 3852593 - hypothetical_protein no_locus_tag AWJ45501 3852516 3856976 + glutamate_synthase_large_subunit I3O_20625 AWJ45502 3856989 3858407 + glutamate_synthase_small_subunit I3O_20630 I3O_20635 3858591 3859638 + DUF1016_domain-containing_protein no_locus_tag AWJ45503 3859698 3860162 - YhcH/YjgK/YiaL_family_protein I3O_20640 AWJ45504 3860159 3861034 - N-acetylmannosamine_kinase I3O_20645 AWJ45505 3861031 3861720 - N-acetylmannosamine-6-phosphate_2-epimerase I3O_20650 AWJ45506 3861768 3863258 - MFS_transporter I3O_20655 AWJ45507 3863368 3864261 - N-acetylneuraminate_lyase nanA AWJ45508 3864383 3865174 - transcriptional_regulator_NanR nanR I3O_20670 3865444 3865554 - transposase no_locus_tag AWJ45509 3865554 3866921 + C4-dicarboxylate_transporter I3O_20675 AWJ45510 3866964 3867461 - stringent_starvation_protein_B I3O_20680 AWJ45511 3867467 3868105 - stringent_starvation_protein_A I3O_20685 AWJ45512 3868047 3868256 + hypothetical_protein I3O_20690 AWJ46895 3868208 3868387 - hypothetical_protein I3O_20695 AWJ45513 3868361 3868582 + hypothetical_protein I3O_20700 AWJ45514 3868500 3868892 - 30S_ribosomal_protein_S9 I3O_20705 AWJ45515 3868908 3869336 - 50S_ribosomal_protein_L13 I3O_20710 AWJ45516 3869555 3870682 - cell_division_protein_ZapE I3O_20715 AWJ45517 3870876 3871274 + hypothetical_protein I3O_20720 AWJ45518 3871428 3872795 + periplasmic_pH-dependent_serine_endoprotease DegQ I3O_20725 AWJ45519 3872885 3873952 + outer_membrane-stress_sensor_serine endopeptidase DegS I3O_20730 AWJ45520 3874015 3874953 - malate_dehydrogenase I3O_20735 AWJ45521 3875388 3875858 + arginine_repressor I3O_20740 AWJ45522 3876223 3876486 + DUF1471_domain-containing_protein I3O_20745 AWJ45523 3876542 3876814 - hypothetical_protein I3O_20750 AWJ45524 3876906 3878873 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB I3O_20755 AWJ45525 3878879 3879811 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA I3O_20760 AWJ45526 3879819 3880022 - protein_AaeX I3O_20765 AWJ45527 3880205 3881134 + HTH-type_transcriptional_activator_AaeR I3O_20770 AWJ45528 3881262 3882707 - metalloprotease_TldD I3O_20775 AWJ45529 3882863 3886663 - AsmA2_domain-containing_protein I3O_20780 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AWJ45504 97 508 100.0 5e-179 PJR32597.1 AWJ45505 99 456 100.0 1e-160 PJR32598.1 AWJ45506 99 990 100.0 0.0 PJR32600.1 AWJ45508 99 536 100.0 0.0 >> 347. CP024889_0 Source: Escherichia coli strain AR_0019 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2490 Table of genes, locations, strands and annotations of subject cluster: ATY26504 4536297 4537742 + metalloprotease_TldD AM346_23615 ATY26505 4537870 4538799 - HTH-type_transcriptional_activator_AaeR AM346_23620 ATY26506 4538982 4539185 + protein_AaeX AM346_23625 ATY26507 4539193 4540125 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA AM346_23630 ATY26508 4540131 4542098 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB AM346_23635 ATY26509 4542190 4542462 + hypothetical_protein AM346_23640 ATY26510 4542518 4542781 - DUF1471_domain-containing_protein AM346_23645 ATY26511 4543146 4543616 - arginine_repressor AM346_23650 ATY26512 4544051 4544989 + malate_dehydrogenase AM346_23655 ATY26513 4545052 4546119 - outer_membrane-stress_sensor_serine endopeptidase DegS AM346_23660 ATY26514 4546209 4547576 - periplasmic_pH-dependent_serine_endoprotease DegQ AM346_23665 ATY26515 4547730 4548128 - hypothetical_protein AM346_23670 ATY26516 4548322 4549449 + cell_division_protein_ZapE AM346_23675 ATY26517 4549668 4550096 + 50S_ribosomal_protein_L13 AM346_23680 ATY26518 4550112 4550504 + 30S_ribosomal_protein_S9 AM346_23685 ATY26519 4550422 4550643 - hypothetical_protein AM346_23690 ATY26781 4550617 4550796 + hypothetical_protein AM346_23695 ATY26780 4550748 4550957 - hypothetical_protein AM346_23700 ATY26520 4550899 4551537 + stringent_starvation_protein_A AM346_23705 ATY26521 4551543 4552040 + stringent_starvation_protein_B AM346_23710 ATY26522 4552083 4553450 - C4-dicarboxylate_transporter AM346_23715 AM346_23720 4553450 4553560 + transposase no_locus_tag ATY26523 4553830 4554621 + transcriptional_regulator_NanR AM346_23725 ATY26524 4554743 4555636 + N-acetylneuraminate_lyase nanA ATY26525 4555745 4557235 + MFS_transporter AM346_23735 ATY26526 4557283 4557972 + N-acetylmannosamine-6-phosphate_2-epimerase AM346_23740 ATY26527 4557969 4558844 + N-acetylmannosamine_kinase AM346_23745 ATY26528 4558841 4559305 + YhcH/YjgK/YiaL_family_protein AM346_23750 ATY26529 4559381 4559686 - transposase AM346_23755 ATY26530 4559703 4560182 - DUF1016_domain-containing_protein AM346_23760 ATY26531 4560366 4561784 - glutamate_synthase AM346_23765 ATY26532 4561797 4566257 - glutamate_synthase_large_subunit AM346_23770 AM346_23775 4566180 4566406 + hypothetical_protein no_locus_tag ATY26533 4566304 4566540 + hypothetical_protein AM346_23780 ATY26782 4566932 4567861 + TIGR01212_family_radical_SAM_protein AM346_23785 ATY26534 4567957 4570293 + hybrid_sensor_histidine_kinase/response regulator AM346_23790 ATY26535 4570523 4571176 + isoprenoid_biosynthesis_protein_ElbB AM346_23795 ATY26536 4571173 4571901 + monofunctional_biosynthetic_peptidoglycan transglycosylase AM346_23800 ATY26537 4571898 4572530 - protein_YrbL AM346_23805 ATY26538 4572744 4573016 - phosphocarrier_protein_NPr AM346_23810 ATY26539 4573013 4573867 - RNase_adaptor_protein_RapZ AM346_23815 ATY26540 4573913 4574404 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN AM346_23820 ATY26541 4574522 4574809 - ribosome_hibernation_promoting_factor AM346_23825 ATY26542 4574832 4576265 - RNA_polymerase_sigma-54_factor AM346_23830 ATY26543 4576313 4577038 - ABC_transporter_ATP-binding_protein lptB ATY26544 4577045 4577602 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA AM346_23840 ATY26545 4577571 4578146 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC ATY26546 4578143 4578709 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC AM346_23850 ATY26547 4578730 4579716 - arabinose_5-phosphate_isomerase_KdsD AM346_23855 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 ATY26527 97 507 100.0 9e-179 PJR32597.1 ATY26526 99 456 100.0 1e-160 PJR32598.1 ATY26525 99 990 100.0 0.0 PJR32600.1 ATY26523 100 537 100.0 0.0 >> 348. CP019005_0 Source: Escherichia coli strain Ecol_AZ155 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2490 Table of genes, locations, strands and annotations of subject cluster: AQV87659 33241 33807 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC BE948_02810 AQV87660 33804 34379 + LPS_export_ABC_transporter_periplasmic_protein LptC BE948_02815 AQV87661 34348 34905 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA BE948_02820 AQV87662 34912 35637 + ABC_transporter_ATP-binding_protein BE948_02825 AQV87663 35685 37118 + RNA_polymerase_sigma-54_factor BE948_02830 AQV87664 37141 37428 + ribosome_hibernation_promoting_factor BE948_02835 AQV87665 37546 38037 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN BE948_02840 AQV87666 38083 38937 + RNase_adaptor_protein_RapZ BE948_02845 AQV87667 38934 39206 + phosphocarrier_protein_NPr BE948_02850 AQV87668 39420 40052 + hypothetical_protein BE948_02855 AQV87669 40049 40777 - monofunctional_biosynthetic_peptidoglycan transglycosylase BE948_02860 AQV87670 40774 41427 - glutamine_amidotransferase BE948_02865 AQV87671 41657 43993 - hybrid_sensor_histidine_kinase/response regulator BE948_02870 AQV92104 44089 45018 - TIGR01212_family_radical_SAM_protein BE948_02875 AQV87672 45410 45646 - hypothetical_protein BE948_02880 AQV87673 45585 50153 + glutamate_synthase_large_subunit BE948_02885 AQV87674 50166 51584 + glutamate_synthase BE948_02890 AQV87675 51768 52247 + hypothetical_protein BE948_02895 AQV87676 52264 52569 + transposase BE948_02900 AQV87677 52645 53109 - hypothetical_protein BE948_02905 AQV87678 53106 53981 - N-acetylmannosamine_kinase BE948_02910 AQV87679 53978 54667 - N-acetylmannosamine-6-phosphate_2-epimerase BE948_02915 AQV87680 54715 56205 - MFS_transporter BE948_02920 AQV87681 56314 57207 - N-acetylneuraminate_lyase BE948_02925 AQV87682 57329 58120 - transcriptional_regulator_NanR BE948_02930 BE948_02935 58390 58500 - transposase no_locus_tag AQV87683 58500 59867 + C4-dicarboxylate_transporter BE948_02940 AQV87684 59910 60407 - stringent_starvation_protein_B BE948_02945 AQV87685 60413 61051 - stringent_starvation_protein_A sspA AQV87686 61446 61838 - 30S_ribosomal_protein_S9 BE948_02955 AQV87687 61854 62282 - 50S_ribosomal_protein_L13 BE948_02960 AQV87688 62501 63628 - cell_division_protein_ZapE BE948_02965 AQV92105 63822 64220 + hypothetical_protein BE948_02970 AQV87689 64374 65741 + periplasmic_pH-dependent_serine_endoprotease DegQ BE948_02975 AQV87690 65831 66898 + outer_membrane-stress_sensor_serine endopeptidase DegS BE948_02980 AQV87691 66961 67899 - malate_dehydrogenase BE948_02985 AQV87692 68334 68804 + arginine_repressor BE948_02990 AQV87693 69169 69432 + hypothetical_protein BE948_02995 AQV87694 69488 69760 - hypothetical_protein BE948_03000 AQV87695 69852 71819 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BE948_03005 AQV87696 71825 72757 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA BE948_03010 AQV87697 72765 72968 - protein_AaeX BE948_03015 AQV87698 73151 74080 + HTH-type_transcriptional_activator_AaeR BE948_03020 AQV87699 74214 75659 - metalloprotease_TldD BE948_03025 BE948_03030 75763 75996 + hypothetical_protein no_locus_tag AQV87700 76089 79889 - DUF3971_domain-containing_protein BE948_03035 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AQV87678 97 507 100.0 9e-179 PJR32597.1 AQV87679 99 456 100.0 1e-160 PJR32598.1 AQV87680 99 990 100.0 0.0 PJR32600.1 AQV87682 100 537 100.0 0.0 >> 349. CP014092_0 Source: Escherichia coli strain FDAARGOS_95 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2490 Table of genes, locations, strands and annotations of subject cluster: AMF90132 3605696 3607141 + metalloprotease_TldD AL551_18460 AMF90133 3607269 3608198 - HTH-type_transcriptional_activator_AaeR AL551_18465 AMF91827 3608381 3608584 + protein_AaeX AL551_18470 AMF90134 3608592 3609524 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA AL551_18475 AMF90135 3609530 3611497 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB AL551_18480 AMF90136 3611589 3611861 + hypothetical_protein AL551_18485 AMF90137 3611917 3612180 - DUF1471_domain-containing_protein AL551_18490 AMF90138 3612545 3613015 - arginine_repressor AL551_18495 AMF90139 3613450 3614388 + malate_dehydrogenase AL551_18500 AMF90140 3614451 3615518 - outer_membrane-stress_sensor_serine endopeptidase DegS AL551_18505 AMF90141 3615608 3616975 - periplasmic_pH-dependent_serine_endoprotease DegQ AL551_18510 AMF90142 3617129 3617527 - hypothetical_protein AL551_18515 AMF90143 3617721 3618848 + cell_division_protein_ZapE AL551_18520 AMF90144 3619067 3619495 + 50S_ribosomal_protein_L13 AL551_18525 AMF90145 3619511 3619903 + 30S_ribosomal_protein_S9 AL551_18530 AUW39695 3619821 3620042 - hypothetical_protein AL551_30385 AUW39878 3620016 3620195 + hypothetical_protein AL551_30390 AUW39877 3620147 3620356 - hypothetical_protein AL551_30395 AMF90146 3620298 3620936 + stringent_starvation_protein_A AL551_18535 AMF90147 3620942 3621439 + stringent_starvation_protein_B AL551_18540 AMF90148 3621482 3622849 - C4-dicarboxylate_transporter AL551_18545 AL551_30400 3622849 3622959 + transposase no_locus_tag AMF90149 3623229 3624020 + transcriptional_regulator_NanR nanR AMF90150 3624142 3625035 + N-acetylneuraminate_lyase nanA AMF90151 3625145 3626635 + MFS_transporter AL551_18560 AMF90152 3626683 3627372 + N-acetylmannosamine-6-phosphate_2-epimerase AL551_18565 AMF90153 3627369 3628244 + N-acetylmannosamine_kinase AL551_18570 AMF90154 3628241 3628705 + YhcH/YjgK/YiaL_family_protein AL551_18575 AL551_18580 3628765 3629812 - DUF1016_domain-containing_protein no_locus_tag AMF90155 3629996 3631414 - glutamate_synthase_small_subunit AL551_18585 AMF91828 3631427 3635887 - glutamate_synthase_large_subunit AL551_18590 AL551_30405 3635810 3636036 + hypothetical_protein no_locus_tag AUW39696 3635934 3636170 + hypothetical_protein AL551_30410 AMF91829 3636562 3637491 + TIGR01212_family_radical_SAM_protein AL551_18595 AMF90156 3637587 3639923 + hybrid_sensor_histidine_kinase/response regulator AL551_18600 AMF90157 3640153 3640806 + glutamine_amidotransferase AL551_18605 AMF90158 3640803 3641531 + monofunctional_biosynthetic_peptidoglycan transglycosylase AL551_18610 AMF90159 3641528 3642160 - protein_YrbL yrbL AMF90160 3642374 3642646 - phosphocarrier_protein_NPr AL551_18620 AMF90161 3642643 3643497 - RNase_adaptor_protein_RapZ AL551_18625 AMF90162 3643543 3644034 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN AL551_18630 AMF90163 3644152 3644439 - ribosome_hibernation_promoting_factor AL551_18635 AMF90164 3644462 3645895 - RNA_polymerase_sigma-54_factor AL551_18640 AMF90165 3645943 3646668 - ABC_transporter_ATP-binding_protein lptB AMF90166 3646675 3647232 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA AL551_18650 AMF90167 3647201 3647776 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC AMF90168 3647773 3648339 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC AL551_18660 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AMF90153 97 508 100.0 5e-179 PJR32597.1 AMF90152 99 456 100.0 1e-160 PJR32598.1 AMF90151 99 990 100.0 0.0 PJR32600.1 AMF90149 99 536 100.0 0.0 >> 350. CP047094_0 Source: Salmonella sp. S13 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2452 Table of genes, locations, strands and annotations of subject cluster: QHN47045 3936149 3936715 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHN47046 3936712 3937287 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHN47047 3937256 3937813 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHN47048 3937820 3938545 + LPS_export_ABC_transporter_ATP-binding_protein lptB QHN47049 3938593 3940026 + RNA_polymerase_factor_sigma-54 rpoN QHN47050 3940049 3940336 + ribosome_hibernation_promoting_factor GQN55_20755 QHN47051 3940454 3940945 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHN47052 3940991 3941845 + RNase_adapter_RapZ rapZ QHN47053 3941842 3942114 + PTS_phosphocarrier_protein_NPr npr QHN47054 3942327 3942959 + PhoP_regulatory_network_protein_YrbL yrbL QHN47055 3942956 3943684 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHN47056 3943681 3944334 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHN47057 3944564 3946900 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHN47058 3946996 3947925 - TIGR01212_family_radical_SAM_protein GQN55_20795 QHN47927 3948600 3953060 + glutamate_synthase_large_subunit gltB QHN47059 3953073 3954491 + glutamate_synthase GQN55_20805 QHN47060 3954675 3955154 + DUF1016_family_protein GQN55_20810 QHN47061 3955171 3955476 + transposase GQN55_20815 QHN47062 3955552 3956016 - YhcH/YjgK/YiaL_family_protein GQN55_20820 QHN47063 3956013 3956888 - ROK_family_protein GQN55_20825 QHN47064 3956885 3957574 - putative_N-acetylmannosamine-6-phosphate 2-epimerase GQN55_20830 QHN47065 3957622 3959112 - sialic_acid_transporter_NanT nanT QHN47066 3959221 3960114 - N-acetylneuraminate_lyase nanA QHN47067 3960236 3961027 - transcriptional_regulator_NanR nanR QHN47068 3961407 3962774 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHN47069 3962816 3963313 - ClpXP_protease_specificity-enhancing_factor sspB QHN47070 3963319 3963957 - stringent_starvation_protein_A sspA QHN47071 3964352 3964744 - 30S_ribosomal_protein_S9 rpsI QHN47072 3964760 3965188 - 50S_ribosomal_protein_L13 rplM QHN47073 3965407 3966534 - cell_division_protein_ZapE zapE QHN47074 3966728 3967126 + DUF1043_family_protein GQN55_20880 QHN47075 3967280 3968647 + serine_endoprotease_DegQ degQ QHN47076 3968737 3969804 + outer_membrane-stress_sensor_serine endopeptidase DegS degS QHN47077 3969867 3970805 - malate_dehydrogenase mdh QHN47078 3971240 3971710 + transcriptional_regulator_ArgR argR QHN47928 3972075 3972338 + peroxide/acid_stress_response_protein_YhcN yhcN QHN47079 3972394 3972666 - hypothetical_protein GQN55_20910 QHN47080 3972758 3974725 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHN47081 3974731 3975663 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHN47082 3975671 3975874 - DUF1656_domain-containing_protein GQN55_20925 QHN47083 3976057 3976986 + HTH-type_transcriptional_activator_AaeR aaeR QHN47084 3977120 3978565 - metalloprotease_TldD tldD QHN47085 3978995 3982795 - AsmA2_domain-containing_protein GQN55_20940 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QHN47062 98 314 100.0 3e-107 PJR32598.1 QHN47065 99 990 100.0 0.0 PJR32599.1 QHN47066 100 611 100.0 0.0 PJR32600.1 QHN47067 100 537 100.0 0.0 >> 351. CP043742_0 Source: Escherichia coli strain CVM N17EC0211 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2452 Table of genes, locations, strands and annotations of subject cluster: QEP55411 530740 532185 + metalloprotease_TldD tldD QEP55412 532319 533248 - HTH-type_transcriptional_activator_AaeR aaeR QEP55413 533431 533634 + DUF1656_domain-containing_protein D9E17_02570 QEP55414 533642 534574 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QEP55415 534580 536547 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QEP55416 536639 536911 + hypothetical_protein D9E17_02585 QEP55417 536967 537230 - peroxide/acid_stress_response_protein_YhcN yhcN QEP55418 537595 538065 - transcriptional_regulator_ArgR argR QEP55419 538500 539438 + malate_dehydrogenase mdh QEP55420 539501 540568 - serine_endoprotease_DegS D9E17_02605 QEP55421 540658 542025 - serine_endoprotease_DegQ degQ QEP55422 542179 542577 - DUF1043_family_protein D9E17_02615 QEP55423 542771 543898 + cell_division_protein_ZapE D9E17_02620 QEP55424 544117 544545 + 50S_ribosomal_protein_L13 rplM QEP55425 544561 544953 + 30S_ribosomal_protein_S9 rpsI QEP55426 544871 545092 - hypothetical_protein D9E17_02635 QEP55427 545348 545986 + stringent_starvation_protein_A sspA QEP55428 545992 546489 + ClpXP_protease_specificity-enhancing_factor sspB QEP55429 546533 547900 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QEP55430 548280 549071 + transcriptional_regulator_NanR nanR QEP55431 549193 550086 + N-acetylneuraminate_lyase nanA QEP55432 550196 551686 + sialic_acid_transporter_NanT nanT QEP55433 551734 552423 + N-acetylmannosamine-6-phosphate_2-epimerase D9E17_02670 QEP55434 552420 553295 + N-acetylmannosamine_kinase D9E17_02675 QEP55435 553292 553756 + DUF386_domain-containing_protein D9E17_02680 QEP55436 553832 554137 - transposase D9E17_02685 QEP55437 554154 554633 - DUF1016_domain-containing_protein D9E17_02690 QEP55438 554817 556235 - glutamate_synthase D9E17_02695 QEP58963 556248 560708 - glutamate_synthase_large_subunit gltB QEP55439 561383 562312 + TIGR01212_family_radical_SAM_protein D9E17_02705 QEP55440 562408 564744 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QEP55441 564974 565627 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QEP55442 565624 566352 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QEP55443 566349 566981 - PhoP_regulatory_network_protein_YrbL yrbL QEP55444 567194 567466 - PTS_phosphocarrier_protein_NPr npr QEP55445 567463 568317 - RNase_adapter_RapZ rapZ QEP55446 568363 568854 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QEP55447 568972 569259 - ribosome_hibernation_promoting_factor D9E17_02745 QEP55448 569282 570715 - RNA_polymerase_factor_sigma-54 rpoN QEP55449 570763 571488 - LPS_export_ABC_transporter_ATP-binding_protein lptB QEP55450 571495 572052 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QEP55451 572021 572596 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QEP55452 572593 573159 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QEP55453 573180 574166 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QEP55435 98 314 100.0 3e-107 PJR32598.1 QEP55432 99 990 100.0 0.0 PJR32599.1 QEP55431 100 611 100.0 0.0 PJR32600.1 QEP55430 100 537 100.0 0.0 >> 352. CP043739_0 Source: Escherichia coli strain CVM N17EC0320 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2452 Table of genes, locations, strands and annotations of subject cluster: QEQ81831 529995 531440 + metalloprotease_TldD tldD QEQ81832 531574 532503 - HTH-type_transcriptional_activator_AaeR aaeR QEQ81833 532686 532889 + DUF1656_domain-containing_protein D9E71_02570 QEQ81834 532897 533829 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QEQ81835 533835 535802 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QEQ81836 535894 536166 + hypothetical_protein D9E71_02585 QEQ81837 536222 536485 - peroxide/acid_stress_response_protein_YhcN yhcN QEQ81838 536850 537320 - transcriptional_regulator_ArgR argR QEQ81839 537755 538693 + malate_dehydrogenase mdh QEQ81840 538756 539823 - serine_endoprotease_DegS D9E71_02605 QEQ81841 539913 541280 - serine_endoprotease_DegQ degQ QEQ81842 541434 541832 - DUF1043_family_protein D9E71_02615 QEQ81843 542026 543153 + cell_division_protein_ZapE D9E71_02620 QEQ81844 543372 543800 + 50S_ribosomal_protein_L13 rplM QEQ81845 543816 544208 + 30S_ribosomal_protein_S9 rpsI QEQ81846 544126 544347 - hypothetical_protein D9E71_02635 QEQ81847 544603 545241 + stringent_starvation_protein_A sspA QEQ81848 545247 545744 + ClpXP_protease_specificity-enhancing_factor sspB QEQ81849 545788 547155 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QEQ81850 547535 548326 + transcriptional_regulator_NanR nanR QEQ81851 548448 549341 + N-acetylneuraminate_lyase nanA QEQ81852 549451 550941 + sialic_acid_transporter_NanT nanT QEQ81853 550989 551678 + N-acetylmannosamine-6-phosphate_2-epimerase D9E71_02670 QEQ81854 551675 552550 + N-acetylmannosamine_kinase D9E71_02675 QEQ81855 552547 553011 + DUF386_domain-containing_protein D9E71_02680 QEQ81856 553087 553392 - transposase D9E71_02685 QEQ81857 553409 553888 - DUF1016_domain-containing_protein D9E71_02690 QEQ81858 554072 555490 - glutamate_synthase D9E71_02695 QEQ85383 555503 559963 - glutamate_synthase_large_subunit gltB QEQ81859 560638 561567 + TIGR01212_family_radical_SAM_protein D9E71_02705 QEQ81860 561663 563999 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QEQ81861 564229 564882 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QEQ81862 564879 565607 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QEQ81863 565604 566236 - PhoP_regulatory_network_protein_YrbL yrbL QEQ81864 566449 566721 - PTS_phosphocarrier_protein_NPr npr QEQ81865 566718 567572 - RNase_adapter_RapZ rapZ QEQ81866 567618 568109 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QEQ81867 568227 568514 - ribosome_hibernation_promoting_factor D9E71_02745 QEQ81868 568537 569970 - RNA_polymerase_factor_sigma-54 rpoN QEQ81869 570018 570743 - LPS_export_ABC_transporter_ATP-binding_protein lptB QEQ81870 570750 571307 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QEQ81871 571276 571851 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QEQ81872 571848 572414 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QEQ81873 572435 573421 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QEQ81855 98 314 100.0 3e-107 PJR32598.1 QEQ81852 99 990 100.0 0.0 PJR32599.1 QEQ81851 100 611 100.0 0.0 PJR32600.1 QEQ81850 100 537 100.0 0.0 >> 353. CP042298_0 Source: Escherichia coli strain RM9088 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2452 Table of genes, locations, strands and annotations of subject cluster: QEG88417 3693557 3695002 + metalloprotease_TldD tldD QEG88418 3695130 3696059 - HTH-type_transcriptional_activator_AaeR aaeR QEG88419 3696242 3696445 + DUF1656_domain-containing_protein FRV13_20310 QEG88420 3696453 3697385 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QEG88421 3697391 3699358 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QEG88422 3699450 3699722 + hypothetical_protein FRV13_20325 QEG88423 3699778 3700041 - peroxide/acid_stress_response_protein_YhcN yhcN QEG88424 3700406 3700876 - transcriptional_regulator_ArgR argR QEG88425 3701311 3702249 + malate_dehydrogenase mdh QEG88426 3702311 3703378 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QEG88427 3703468 3704835 - serine_endoprotease_DegQ degQ QEG88428 3704989 3705387 - DUF1043_family_protein FRV13_20355 QEG88429 3705581 3706708 + cell_division_protein_ZapE FRV13_20360 QEG88430 3706927 3707355 + 50S_ribosomal_protein_L13 rplM QEG88431 3707371 3707763 + 30S_ribosomal_protein_S9 rpsI QEG88432 3707681 3707902 - hypothetical_protein FRV13_20375 QEG88433 3708158 3708796 + stringent_starvation_protein_A sspA QEG88434 3708802 3709299 + ClpXP_protease_specificity-enhancing_factor sspB QEG88435 3709343 3710710 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QEG88436 3711090 3711881 + transcriptional_regulator_NanR nanR QEG88437 3712003 3712896 + N-acetylneuraminate_lyase nanA QEG88438 3713006 3714496 + sialic_acid_transporter_NanT nanT QEG88439 3714544 3715233 + N-acetylmannosamine-6-phosphate_2-epimerase FRV13_20410 QEG88440 3715230 3716105 + ROK_family_protein FRV13_20415 QEG88441 3716102 3716566 + DUF386_domain-containing_protein FRV13_20420 QEG88442 3716642 3716947 - transposase FRV13_20425 QEG88443 3716964 3717443 - DUF1016_domain-containing_protein FRV13_20430 QEG88444 3717627 3719045 - glutamate_synthase FRV13_20435 QEG89976 3719058 3723518 - glutamate_synthase_large_subunit gltB QEG88445 3724193 3725122 + TIGR01212_family_radical_SAM_protein FRV13_20445 QEG88446 3725218 3727554 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QEG88447 3727784 3728437 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QEG88448 3728434 3729162 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QEG88449 3729121 3729792 - PhoP_regulatory_network_protein_YrbL yrbL QEG88450 3730006 3730278 - PTS_phosphocarrier_protein_NPr npr QEG88451 3730275 3731129 - RNase_adapter_RapZ rapZ QEG88452 3731175 3731666 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QEG88453 3731784 3732071 - ribosome_hibernation_promoting_factor FRV13_20485 QEG88454 3732094 3733527 - RNA_polymerase_factor_sigma-54 rpoN QEG88455 3733575 3734300 - LPS_export_ABC_transporter_ATP-binding_protein lptB QEG88456 3734307 3734864 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QEG88457 3734833 3735408 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QEG88458 3735405 3735971 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QEG88459 3735992 3736978 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QEG88441 98 314 100.0 3e-107 PJR32598.1 QEG88438 99 990 100.0 0.0 PJR32599.1 QEG88437 100 611 100.0 0.0 PJR32600.1 QEG88436 100 537 100.0 0.0 >> 354. CP030919_0 Source: Escherichia coli strain KL53 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2452 Table of genes, locations, strands and annotations of subject cluster: AXE69513 3205245 3205811 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC CPT07_16915 AXE69514 3205808 3206383 + LPS_export_ABC_transporter_periplasmic_protein LptC CPT07_16920 AXE69515 3206352 3206909 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA CPT07_16925 AXE69516 3206916 3207641 + ABC_transporter_ATP-binding_protein CPT07_16930 AXE69517 3207689 3209122 + RNA_polymerase_sigma-54_factor CPT07_16935 AXE69518 3209145 3209432 + ribosome_hibernation_promoting_factor CPT07_16940 AXE69519 3209550 3210041 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN CPT07_16945 AXE69520 3210087 3210941 + RNase_adaptor_protein_RapZ CPT07_16950 AXE69521 3210938 3211210 + phosphocarrier_protein_NPr CPT07_16955 AXE69522 3211424 3212056 + PhoP_regulatory_network_protein_YrbL CPT07_16960 AXE69523 3212053 3212781 - monofunctional_biosynthetic_peptidoglycan transglycosylase CPT07_16965 AXE69524 3212778 3213431 - glutamine_amidotransferase CPT07_16970 AXE69525 3213661 3215997 - hybrid_sensor_histidine_kinase/response regulator CPT07_16975 AXE71110 3216093 3217022 - TIGR01212_family_radical_SAM_protein CPT07_16980 AXE69526 3217414 3217650 - hypothetical_protein CPT07_16985 CPT07_16990 3217548 3217774 - hypothetical_protein no_locus_tag AXE69527 3217697 3222157 + glutamate_synthase_large_subunit CPT07_16995 AXE69528 3222170 3223588 + glutamate_synthase CPT07_17000 AXE69529 3223772 3224251 + DUF1016_family_protein CPT07_17005 AXE69530 3224268 3224573 + transposase CPT07_17010 AXE69531 3224649 3225113 - YhcH/YjgK/YiaL_family_protein CPT07_17015 AXE69532 3225110 3225985 - ROK_family_protein CPT07_17020 AXE69533 3225982 3226671 - N-acetylmannosamine-6-phosphate_2-epimerase CPT07_17025 AXE69534 3226719 3228209 - MFS_transporter CPT07_17030 AXE69535 3228319 3229212 - N-acetylneuraminate_lyase nanA AXE69536 3229334 3230125 - transcriptional_regulator_NanR CPT07_17040 CPT07_17045 3230395 3230505 - transposase no_locus_tag AXE69537 3230505 3231872 + C4-dicarboxylate_transporter_DcuC CPT07_17050 AXE69538 3231916 3232413 - stringent_starvation_protein_B CPT07_17055 AXE69539 3232419 3233057 - stringent_starvation_protein_A CPT07_17060 AXE69540 3232999 3233208 + hypothetical_protein CPT07_17065 AXE69541 3233313 3233534 + hypothetical_protein CPT07_17070 AXE69542 3233452 3233844 - 30S_ribosomal_protein_S9 CPT07_17075 AXE69543 3233860 3234288 - 50S_ribosomal_protein_L13 CPT07_17080 AXE69544 3234507 3235634 - cell_division_protein_ZapE CPT07_17085 AXE69545 3235828 3236226 + DUF1043_family_protein CPT07_17090 AXE69546 3236380 3237747 + periplasmic_pH-dependent_serine_endoprotease DegQ CPT07_17095 AXE69547 3237837 3238904 + serine_endoprotease_DegS CPT07_17100 AXE69548 3238966 3239904 - malate_dehydrogenase CPT07_17105 AXE69549 3240339 3240809 + transcriptional_regulator_ArgR CPT07_17110 AXE71111 3241174 3241437 + DUF1471_domain-containing_protein CPT07_17115 AXE69550 3241493 3241765 - hypothetical_protein CPT07_17120 AXE69551 3241857 3243824 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CPT07_17125 AXE69552 3243830 3244762 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CPT07_17130 AXE69553 3244770 3244973 - protein_AaeX CPT07_17135 AXE69554 3245156 3246085 + HTH-type_transcriptional_activator_AaeR CPT07_17140 AXE69555 3246213 3247658 - metalloprotease_TldD CPT07_17145 AXE69556 3248088 3251888 - AsmA2_domain-containing_protein CPT07_17150 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AXE69531 98 314 100.0 3e-107 PJR32598.1 AXE69534 99 990 100.0 0.0 PJR32599.1 AXE69535 100 611 100.0 0.0 PJR32600.1 AXE69536 100 537 100.0 0.0 >> 355. CP025739_0 Source: Escherichia coli strain Ec40 chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2452 Table of genes, locations, strands and annotations of subject cluster: AUO39906 828994 829560 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC C0R78_04280 AUO39907 829557 830132 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AUO39908 830101 830658 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA C0R78_04290 AUO39909 830665 831390 + ABC_transporter_ATP-binding_protein lptB AUO39910 831438 832871 + RNA_polymerase_sigma-54_factor C0R78_04300 AUO39911 832894 833181 + ribosome_hibernation_promoting_factor C0R78_04305 AUO39912 833299 833790 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN C0R78_04310 AUO39913 833836 834690 + RNase_adaptor_protein_RapZ C0R78_04315 AUO39914 834687 834959 + phosphocarrier_protein_NPr C0R78_04320 AUO39915 835173 835805 + protein_YrbL yrbL AUO39916 835802 836530 - monofunctional_biosynthetic_peptidoglycan transglycosylase C0R78_04330 AUO39917 836527 837180 - glutamine_amidotransferase C0R78_04335 AUO39918 837410 839746 - hybrid_sensor_histidine_kinase/response regulator C0R78_04340 AUO43623 839842 840771 - TIGR01212_family_radical_SAM_protein C0R78_04345 AUO39919 841163 841399 - hypothetical_protein C0R78_04350 C0R78_04355 841297 841523 - hypothetical_protein no_locus_tag AUO39920 841446 845906 + glutamate_synthase_large_subunit C0R78_04360 AUO39921 845919 847337 + glutamate_synthase C0R78_04365 AUO39922 847521 848000 + DUF1016_domain-containing_protein C0R78_04370 AUO39923 848017 848322 + transposase C0R78_04375 AUO39924 848398 848862 - beta-galactosidase_subunit_beta C0R78_04380 AUO39925 848859 849734 - N-acetylmannosamine_kinase C0R78_04385 AUO39926 849731 850420 - N-acetylmannosamine-6-phosphate_2-epimerase C0R78_04390 AUO39927 850468 851958 - MFS_transporter C0R78_04395 AUO39928 852068 852961 - N-acetylneuraminate_lyase nanA AUO39929 853083 853874 - transcriptional_regulator_NanR nanR C0R78_04410 854144 854254 - transposase no_locus_tag AUO39930 854254 855621 + C4-dicarboxylate_transporter C0R78_04415 AUO39931 855665 856162 - stringent_starvation_protein_B C0R78_04420 AUO39932 856168 856806 - stringent_starvation_protein_A C0R78_04425 AUO39933 856748 856957 + hypothetical_protein C0R78_04430 AUO39934 857062 857283 + hypothetical_protein C0R78_04435 AUO39935 857201 857593 - 30S_ribosomal_protein_S9 C0R78_04440 AUO39936 857609 858037 - 50S_ribosomal_protein_L13 C0R78_04445 AUO39937 858256 859383 - cell_division_protein_ZapE C0R78_04450 AUO39938 859577 859975 + hypothetical_protein C0R78_04455 AUO39939 860129 861496 + periplasmic_pH-dependent_serine_endoprotease DegQ C0R78_04460 AUO39940 861586 862653 + serine_endoprotease_DegS C0R78_04465 AUO39941 862715 863653 - malate_dehydrogenase C0R78_04470 AUO39942 864088 864558 + arginine_repressor C0R78_04475 AUO39943 864923 865186 + DUF1471_domain-containing_protein C0R78_04480 AUO39944 865242 865514 - hypothetical_protein C0R78_04485 AUO39945 865606 867573 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C0R78_04490 AUO39946 867579 868511 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C0R78_04495 AUO39947 868519 868722 - protein_AaeX C0R78_04500 AUO39948 868905 869834 + transcriptional_regulator C0R78_04505 AUO39949 869962 871407 - metalloprotease_TldD C0R78_04510 AUO39950 871837 875637 - TIGR02099_family_protein C0R78_04515 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AUO39924 98 314 100.0 3e-107 PJR32598.1 AUO39927 99 990 100.0 0.0 PJR32599.1 AUO39928 100 611 100.0 0.0 PJR32600.1 AUO39929 100 537 100.0 0.0 >> 356. CP018995_0 Source: Escherichia coli strain Ecol_AZ147 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2452 Table of genes, locations, strands and annotations of subject cluster: BE962_27075 4658491 4658724 - hypothetical_protein no_locus_tag AQV81638 4658828 4660273 + metalloprotease_TldD BE962_27080 AQV81639 4660407 4661336 - HTH-type_transcriptional_activator_AaeR BE962_27085 AQV81640 4661519 4661722 + protein_AaeX BE962_27090 AQV81641 4661730 4662662 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA BE962_27095 AQV81642 4662668 4664635 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BE962_27100 AQV81643 4664727 4664999 + hypothetical_protein BE962_27105 AQV81644 4665055 4665318 - hypothetical_protein BE962_27110 AQV81645 4665683 4666153 - arginine_repressor BE962_27115 AQV81646 4666588 4667526 + malate_dehydrogenase BE962_27120 AQV81647 4667589 4668656 - outer_membrane-stress_sensor_serine endopeptidase DegS BE962_27125 AQV81648 4668746 4670113 - periplasmic_pH-dependent_serine_endoprotease DegQ BE962_27130 AQV81649 4670267 4670665 - hypothetical_protein BE962_27135 AQV81650 4670859 4671986 + cell_division_protein_ZapE BE962_27140 AQV81651 4672205 4672633 + 50S_ribosomal_protein_L13 BE962_27145 AQV81652 4672649 4673041 + 30S_ribosomal_protein_S9 BE962_27150 AQV81653 4673436 4674074 + stringent_starvation_protein_A sspA AQV81654 4674080 4674577 + stringent_starvation_protein_B BE962_27160 AQV81655 4674621 4675988 - C4-dicarboxylate_transporter BE962_27165 BE962_27170 4675988 4676098 + transposase no_locus_tag AQV81656 4676368 4677159 + transcriptional_regulator_NanR BE962_27175 AQV81657 4677281 4678174 + N-acetylneuraminate_lyase BE962_27180 AQV81658 4678284 4679774 + MFS_transporter BE962_27185 AQV81659 4679822 4680511 + N-acetylmannosamine-6-phosphate_2-epimerase BE962_27190 AQV81660 4680508 4681383 + N-acetylmannosamine_kinase BE962_27195 AQV81661 4681380 4681844 + hypothetical_protein BE962_27200 AQV81662 4681920 4682225 - transposase BE962_27205 AQV81663 4682242 4682721 - hypothetical_protein BE962_27210 AQV81664 4682905 4684323 - glutamate_synthase BE962_27215 AQV81665 4684336 4688904 - glutamate_synthase_large_subunit BE962_27220 AQV81666 4688843 4689079 + hypothetical_protein BE962_27225 AQV81875 4689471 4690400 + TIGR01212_family_radical_SAM_protein BE962_27230 AQV81667 4690496 4692832 + hybrid_sensor_histidine_kinase/response regulator BE962_27235 AQV81668 4693062 4693715 + glutamine_amidotransferase BE962_27240 AQV81669 4693712 4694440 + monofunctional_biosynthetic_peptidoglycan transglycosylase BE962_27245 AQV81670 4694437 4695069 - hypothetical_protein BE962_27250 AQV81671 4695282 4695554 - phosphocarrier_protein_NPr BE962_27255 AQV81672 4695551 4696405 - RNase_adaptor_protein_RapZ BE962_27260 AQV81673 4696451 4696942 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN BE962_27265 AQV81674 4697060 4697347 - ribosome_hibernation_promoting_factor BE962_27270 AQV81675 4697370 4698803 - RNA_polymerase_sigma-54_factor BE962_27275 AQV81676 4698851 4699576 - ABC_transporter_ATP-binding_protein BE962_27280 AQV81677 4699583 4700140 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA BE962_27285 AQV81678 4700109 4700684 - LPS_export_ABC_transporter_periplasmic_protein LptC BE962_27290 AQV81679 4700681 4701247 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC BE962_27295 AQV81680 4701268 4702254 - arabinose_5-phosphate_isomerase_KdsD BE962_27300 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AQV81661 98 314 100.0 3e-107 PJR32598.1 AQV81658 99 990 100.0 0.0 PJR32599.1 AQV81657 100 611 100.0 0.0 PJR32600.1 AQV81656 100 537 100.0 0.0 >> 357. LR134247_0 Source: Escherichia coli strain NCTC9040 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2451 Table of genes, locations, strands and annotations of subject cluster: VED41838 529394 529948 + membrane_protein yhdP_3 VED41840 530378 531823 + TldD_protein tldD VED41842 531957 532886 - LysR_family_transcriptional_regulator aaeR VED41844 533068 533271 + protein_AaeX aaeX VED41846 533279 534211 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VED41848 534217 536184 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VED41852 536276 536548 + barnase_inhibitor yhcO VED41854 536604 536867 - protein_YcfR ycfR VED41856 537232 537702 - arginine_repressor argR VED41858 538137 539075 + malate_dehydrogenase mdh VED41861 539138 540205 - protease degS VED41863 540295 541662 - serine_endoprotease degQ VED41865 541816 542214 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VED41867 542408 543535 + putative_ATP/GTP-binding_protein yhcM VED41869 543754 544182 + 50S_ribosomal_protein_L13 rplM VED41871 544198 544590 + 30S_ribosomal_protein_S9 rpsI VED41873 544985 545623 + stringent_starvation_protein_A sspA VED41875 545629 546126 + stringent_starvation_protein_B sspB VED41877 546169 547536 - C4-dicarboxylate_transporter dcuD VED41879 547916 548707 + GntR_family_transcriptional_regulator nanR VED41881 548829 549722 + N-acetylneuraminate_lyase nanA VED41883 549831 551321 + sialic_acid_transporter nanT VED41885 551369 552058 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VED41887 552055 552930 + putative_transcriptional_regulator nanK VED41889 552927 553391 + beta-galactosidase yhcH VED41891 553467 553772 - IS600_orf-like_protein NCTC9040_00554 VED41893 553789 554268 - protein yhcG VED41895 554452 555870 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VED41897 555883 560436 - glutamate_synthase_subunit_alpha gltB VED41899 561018 561947 + putative_radical_SAM_protein NCTC9040_00558 VED41901 562043 564379 + aerobic_respiration_control_protein arcB VED41903 564609 565262 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VED41905 565259 565987 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VED41907 565984 566616 - protein yrbL VED41909 566829 567101 - phosphocarrier_protein ptsO VED41911 567098 567952 - putative_ATPase yhbJ VED41913 567998 568489 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN VED41915 568607 568894 - putative_sigma(54)_modulation_protein yhbH VED41917 568917 570350 - RNA_polymerase_sigma-54_factor_(sigma-N) rpoN VED41919 570398 571123 - lipopolysaccharide_ABC_transporter lptB VED41921 571130 571687 - lipopolysaccharide_transport_periplasmic_protein LptA yhbN VED41923 571656 572231 - putative_organic_solvent_tolerance_protein lptC VED41925 572228 572794 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC VED41927 572815 573801 - D-arabinose_5-phosphate_isomerase kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 VED41889 98 314 100.0 3e-107 PJR32598.1 VED41883 99 990 100.0 0.0 PJR32599.1 VED41881 100 611 100.0 0.0 PJR32600.1 VED41879 99 536 100.0 0.0 >> 358. CP002291_0 Source: Escherichia coli P12b, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2451 Table of genes, locations, strands and annotations of subject cluster: AFG42141 3621062 3621628 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase yrbI AFG42142 3621625 3622200 + hypothetical_protein P12B_c3316 AFG42143 3622169 3622726 + Protein_yhbN_precursor yhbN AFG42144 3622733 3623458 + hypothetical_protein P12B_c3318 AFG42145 3623506 3624939 + RNA_polymerase_sigma-54_factor rpoN AFG42146 3624962 3625249 + putative_sigma(54)_modulation_protein yhbH AFG42147 3625367 3625858 + Nitrogen_regulatory_protein ptsN AFG42148 3625904 3626758 + hypothetical_protein P12B_c3322 AFG42149 3626755 3627027 + Phosphocarrier_protein_NPr ptsO AFG42150 3627240 3627872 + hypothetical_protein P12B_c3324 AFG42151 3627869 3628597 - Monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AFG42152 3628594 3629256 - Sigma_cross-reacting_protein_27A yhbL AFG42153 3631909 3632838 - Radical_SAM_protein,_TIGR01212_family yhcC AFG42154 3633513 3637973 + Glutamate_synthase gltB AFG42155 3637986 3639404 + Glutamate_synthase_(NADPH),_small_subunit gltD AFG42156 3639588 3640067 + hypothetical_protein P12B_c3331 AFG42157 3640465 3640929 - hypothetical_protein P12B_c3332 AFG42158 3640926 3641801 - Putative_NAGC-like_transcriptional_regulator yhcI AFG42159 3641798 3642487 - Putative_N-acetylmannosamine-6-phosphate 2-epimerase yhcJ AFG42160 3642535 3644025 - Sialic_acid_transporter nanT AFG42161 3644134 3645027 - N-acetylneuraminate_lyase nanA AFG42162 3645149 3645940 - Transcriptional_regulator_nanR nanR AFG42163 3646210 3646317 - Putative_IS1_encoded_protein P12B_c3338 AFG42164 3647731 3648228 - Stringent_starvation_protein_B sspB AFG42165 3648234 3648872 - Stringent_starvation_protein_A sspA AFG42166 3649267 3649659 - 30S_ribosomal_protein_S9 rpsI AFG42167 3649675 3650103 - 50S_ribosomal_protein_L13 rplM AFG42168 3650322 3651449 - ATPase,_AFG1_family yhcM AFG42169 3651691 3652101 + hypothetical_protein P12B_c3345 AFG42170 3652194 3653561 + Serine_peptidase_DegQ degQ AFG42171 3653651 3654718 + Protease_degS_precursor degS AFG42172 3654781 3655719 - Malate_dehydrogenase P12B_c3348 AFG42173 3656154 3656624 + Arginine_repressor argR AFG42174 3657672 3659639 - p-hydroxybenzoic_acid_efflux_pump_subunit_aaeB yhcP AFG42175 3659645 3660223 - p-hydroxybenzoic_acid_efflux_pump_subunit_aaeA yhcQ AFG42176 3660585 3660857 - protein_AaeX aaeX AFG42177 3660989 3661900 + HTH-type_transcriptional_activator_aaeR aaeR AFG42178 3662034 3663479 - Protein_tldD tldD AFG42179 3663909 3667562 - hypothetical_protein P12B_c3355 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AFG42157 98 314 100.0 3e-107 PJR32598.1 AFG42160 99 990 100.0 0.0 PJR32599.1 AFG42161 100 611 100.0 0.0 PJR32600.1 AFG42162 99 536 100.0 0.0 >> 359. CU928145_0 Source: Escherichia coli 55989 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2449 Table of genes, locations, strands and annotations of subject cluster: CAU99845 3699520 3700086 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC CAU99846 3700083 3700658 + conserved_hypothetical_protein yrbK CAU99848 3700627 3701184 + putative_lipopolysaccharide_transport_protein_A: periplasmic-binding component of ABC superfamily lptA CAU99850 3701191 3701916 + putative_lipopolysaccharide_transport_protein_B: ATP-binding component of ABC superfamily lptB CAU99852 3701964 3703397 + RNA_polymerase,_sigma_54_(sigma_N)_factor rpoN CAU99854 3703420 3703707 + ribosome-associated,_sigma_54_modulation protein yhbH CAU99856 3703825 3704316 + sugar-specific_enzyme_IIA_component_of_PTS ptsN CAU99858 3704362 3705216 + conserved_hypothetical_protein;_putative nucleoside triphosphate hydrolase domain yhbJ CAU99860 3705213 3705485 + phosphohistidinoprotein-hexose npr CAU99861 3705698 3706330 + conserved_hypothetical_protein yrbL CAU99863 3706327 3707055 - biosynthetic_peptidoglycan_transglycosylase mtgA CAU99865 3707052 3707705 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB CAU99866 3707935 3710271 - hybrid_sensory_histidine_kinase_in_two-component regulatory system with ArcA arcB CAU99868 3710367 3711296 - putative_Fe-S_oxidoreductase yhcC CAU99870 3711878 3716431 + glutamate_synthase,_large_subunit gltB CAU99872 3716444 3717862 + glutamate_synthase,_4Fe-4S_protein,_small subunit gltD CAU99875 3718506 3718847 + conserved_hypothetical_protein EC55989_3633 CAU99877 3718923 3719387 - conserved_hypothetical_protein yhcH CAU99879 3719384 3720259 - putative_N-acetylmannosamine_kinase nanK CAU99881 3720256 3720945 - putative_N-acetylmannosamine-6-P_epimerase nanE CAU99883 3720993 3722483 - sialic_acid_transporter nanT CAU99884 3722592 3723485 - N-acetylneuraminate_lyase nanA CAU99886 3723607 3724398 - DNA-binding_transcriptional_dual_regulator nanR CAU99887 3724778 3726145 + putative_transporter dcuD CAU99889 3726188 3726685 - ClpXP_protease_specificity-enhancing_factor sspB CAU99891 3726691 3727329 - stringent_starvation_protein_A sspA CAU99892 3727724 3728116 - 30S_ribosomal_subunit_protein_S9 rpsI CAU99894 3728132 3728560 - 50S_ribosomal_subunit_protein_L13 rplM CAU99896 3728779 3729906 - conserved_hypothetical_protein;_putative nucleoside triphosphate hydrolase domain yhcM CAU99897 3730100 3730498 + putative_cytochrome_d_ubiquinol_oxidase_subunit III yhcB CAU99899 3730652 3732019 + serine_endoprotease,_periplasmic degQ CAU99901 3732109 3733176 + serine_endoprotease,_periplasmic degS CAU99903 3733239 3734177 - malate_dehydrogenase,_NAD(P)-binding mdh CAU99905 3734612 3735082 + DNA-binding_transcriptional_dual_regulator, L-arginine-binding argR CAU99906 3735447 3735710 + conserved_hypothetical_protein yhcN CAU99908 3735766 3736038 - putative_barnase_inhibitor yhcO CAU99910 3736130 3738097 - p-hydroxybenzoic_acid_efflux_system_component aaeB CAU99912 3738103 3739035 - p-hydroxybenzoic_acid_efflux_system_component aaeA CAU99913 3739043 3739246 - membrane_protein_of_efflux_system aaeX CAU99915 3739429 3740358 + DNA-binding_transcriptional_regulator,_efflux system aaeR CAU99917 3740486 3741931 - putative_peptidase tldD CAU99919 3742087 3745887 - conserved_hypothetical_protein;_putative membrane protein, putative transporter yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 CAU99877 98 311 100.0 7e-106 PJR32598.1 CAU99883 99 990 100.0 0.0 PJR32599.1 CAU99884 100 611 100.0 0.0 PJR32600.1 CAU99886 100 537 100.0 0.0 >> 360. CP041002_0 Source: Escherichia coli strain FDAARGOS_772 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2449 Table of genes, locations, strands and annotations of subject cluster: QDD27568 3826306 3826872 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QDD27569 3826869 3827444 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QDD27570 3827413 3827970 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QDD27571 3827977 3828702 + LPS_export_ABC_transporter_ATP-binding_protein lptB QDD27572 3828750 3830183 + RNA_polymerase_factor_sigma-54 rpoN QDD27573 3830206 3830493 + ribosome_hibernation_promoting_factor FIU16_19840 QDD27574 3830611 3831102 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QDD27575 3831148 3832002 + RNase_adapter_RapZ rapZ QDD27576 3831999 3832271 + PTS_phosphocarrier_protein_NPr npr QDD27577 3832484 3833116 + PhoP_regulatory_network_protein_YrbL yrbL QDD27578 3833113 3833841 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QDD27579 3833838 3834491 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QDD27580 3834721 3837057 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QDD27581 3837153 3838082 - TIGR01212_family_radical_SAM_protein FIU16_19880 QDD29015 3838757 3843217 + glutamate_synthase_large_subunit gltB QDD27582 3843230 3844648 + glutamate_synthase FIU16_19890 QDD27583 3844832 3845311 + DUF1016_domain-containing_protein FIU16_19895 QDD27584 3845328 3845633 + transposase FIU16_19900 QDD27585 3845709 3846173 - DUF386_domain-containing_protein FIU16_19905 QDD27586 3846170 3847045 - N-acetylmannosamine_kinase FIU16_19910 QDD27587 3847042 3847731 - N-acetylmannosamine-6-phosphate_2-epimerase FIU16_19915 QDD27588 3847779 3849269 - sialic_acid_transporter_NanT nanT QDD27589 3849378 3850271 - N-acetylneuraminate_lyase nanA QDD27590 3850393 3851184 - transcriptional_regulator_NanR nanR QDD27591 3851564 3852931 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QDD27592 3852974 3853471 - ClpXP_protease_specificity-enhancing_factor sspB QDD27593 3853477 3854115 - stringent_starvation_protein_A sspA QDD27594 3854371 3854592 + hypothetical_protein FIU16_19950 QDD27595 3854510 3854902 - 30S_ribosomal_protein_S9 rpsI QDD27596 3854918 3855346 - 50S_ribosomal_protein_L13 rplM QDD27597 3855565 3856692 - cell_division_protein_ZapE FIU16_19965 QDD27598 3856886 3857284 + DUF1043_family_protein FIU16_19970 QDD27599 3857438 3858805 + serine_endoprotease_DegQ degQ QDD27600 3858895 3859962 + outer_membrane-stress_sensor_serine endopeptidase DegS degS QDD27601 3860025 3860963 - malate_dehydrogenase mdh QDD27602 3861398 3861868 + transcriptional_regulator_ArgR argR QDD27603 3862233 3862496 + peroxide/acid_stress_response_protein_YhcN yhcN QDD27604 3862552 3862824 - hypothetical_protein FIU16_20000 QDD27605 3862916 3864883 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QDD27606 3864889 3865821 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QDD27607 3865829 3866032 - DUF1656_domain-containing_protein FIU16_20015 QDD27608 3866215 3867144 + HTH-type_transcriptional_activator_AaeR aaeR QDD27609 3867272 3868717 - metalloprotease_TldD tldD QDD27610 3868873 3872673 - AsmA2_domain-containing_protein FIU16_20030 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QDD27585 98 311 100.0 7e-106 PJR32598.1 QDD27588 99 990 100.0 0.0 PJR32599.1 QDD27589 100 611 100.0 0.0 PJR32600.1 QDD27590 100 537 100.0 0.0 >> 361. CP034738_0 Source: Escherichia coli strain L65 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2449 Table of genes, locations, strands and annotations of subject cluster: AZU85467 2609992 2610558 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC AZU85468 2610555 2611130 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AZU85469 2611099 2611656 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA AZU85470 2611663 2612388 + lipopolysaccharide_ABC_transporter_ATP-binding protein EM854_12845 AZU85471 2612436 2613869 + RNA_polymerase_factor_sigma-54 EM854_12850 AZU85472 2613892 2614179 + ribosome_hibernation_promoting_factor EM854_12855 AZU85473 2614297 2614788 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN AZU85474 2614834 2615688 + RNase_adaptor_protein_RapZ EM854_12865 AZU85475 2615685 2615957 + PTS_phosphocarrier_protein_NPr EM854_12870 AZU85476 2616171 2616803 + PhoP_regulatory_network_protein_YrbL yrbL AZU85477 2616800 2617528 - monofunctional_biosynthetic_peptidoglycan transglycosylase EM854_12880 AZU85478 2617525 2618178 - isoprenoid_biosynthesis_protein_ElbB elbB AZU85479 2618408 2620744 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB AZU85480 2620840 2621769 - TIGR01212_family_radical_SAM_protein EM854_12895 AZU85481 2622444 2626904 + glutamate_synthase_large_subunit EM854_12900 AZU85482 2626917 2628335 + glutamate_synthase EM854_12905 AZU85483 2628519 2628998 + DUF1016_family_protein EM854_12910 AZU85484 2629015 2629320 + transposase EM854_12915 AZU85485 2629396 2629860 - YhcH/YjgK/YiaL_family_protein EM854_12920 AZU85486 2629857 2630732 - N-acetylmannosamine_kinase EM854_12925 AZU85487 2630729 2631418 - N-acetylmannosamine-6-phosphate_2-epimerase EM854_12930 AZU85488 2631466 2632956 - MFS_transporter EM854_12935 AZU85489 2633065 2633958 - N-acetylneuraminate_lyase nanA AZU85490 2634080 2634871 - transcriptional_regulator_NanR EM854_12945 AZU85491 2635251 2636618 + C4-dicarboxylate_transporter_DcuC dcuC AZU85492 2636661 2637158 - ClpXP_protease_specificity-enhancing_factor EM854_12955 AZU85493 2637164 2637802 - stringent_starvation_protein_A EM854_12960 AZU85494 2638058 2638279 + hypothetical_protein EM854_12965 AZU85495 2638197 2638589 - 30S_ribosomal_protein_S9 EM854_12970 AZU85496 2638605 2639033 - 50S_ribosomal_protein_L13 EM854_12975 AZU85497 2639252 2640379 - cell_division_protein_ZapE zapE AZU85498 2640573 2640971 + DUF1043_family_protein EM854_12985 AZU85499 2641125 2642492 + serine_endoprotease_DegQ degQ AZU85500 2642582 2643649 + serine_endoprotease_DegS degS AZU85501 2643711 2644649 - malate_dehydrogenase EM854_13000 AZU85502 2645084 2645554 + transcriptional_regulator_ArgR argR AZU85503 2645919 2646182 + DUF1471_domain-containing_protein EM854_13010 AZU85504 2646238 2646510 - hypothetical_protein EM854_13015 AZU85505 2646602 2648569 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AZU85506 2648575 2649507 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AZU85507 2649515 2649718 - DUF1656_domain-containing_protein EM854_13030 AZU85508 2649901 2650830 + HTH-type_transcriptional_activator_AaeR aaeR AZU85509 2650958 2652403 - metalloprotease_TldD tldD AZU85510 2652559 2656359 - AsmA2_domain-containing_protein EM854_13045 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AZU85485 98 311 100.0 7e-106 PJR32598.1 AZU85488 99 990 100.0 0.0 PJR32599.1 AZU85489 100 611 100.0 0.0 PJR32600.1 AZU85490 100 537 100.0 0.0 >> 362. CP015240_0 Source: Escherichia coli strain 2011C-3911, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2449 Table of genes, locations, strands and annotations of subject cluster: ANE59523 1458432 1458998 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase A5956_07180 ANE59524 1458995 1459570 + LPS_export_ABC_transporter_periplasmic_protein LptC A5956_07185 ANE59525 1459539 1460096 + lipopolysaccharide_transport_periplasmic_protein LptA A5956_07190 ANE59526 1460103 1460828 + ABC_transporter_ATP-binding_protein A5956_07195 ANE59527 1460876 1462309 + RNA_polymerase_factor_sigma-54 A5956_07200 ANE59528 1462332 1462619 + hypothetical_protein A5956_07205 ANE59529 1462737 1463228 + transcriptional_regulator A5956_07210 ANE59530 1463274 1464128 + RNase_adaptor_protein_RapZ A5956_07215 ANE59531 1464125 1464397 + phosphohistidinoprotein-hexose phosphotransferase A5956_07220 ANE59532 1464611 1465243 + hypothetical_protein A5956_07225 ANE59533 1465240 1465968 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA ANE59534 1465965 1466618 - isoprenoid_biosynthesis_protein_ElbB A5956_07235 ANE59535 1466848 1469184 - aerobic_respiration_two-component_sensor histidine kinase ArcB A5956_07240 ANE62713 1469280 1470209 - radical_SAM_protein A5956_07245 ANE62714 1470884 1475344 + glutamate_synthase_large_subunit gltB ANE59536 1475357 1476775 + glutamate_synthase A5956_07255 A5956_07260 1476959 1477363 + hypothetical_protein no_locus_tag ANE59537 1477455 1477760 + transposase A5956_07265 ANE59538 1477836 1478300 - hypothetical_protein A5956_07270 ANE59539 1478297 1479172 - N-acetylmannosamine_kinase A5956_07275 ANE59540 1479169 1479858 - N-acetylmannosamine-6-phosphate_2-epimerase A5956_07280 ANE59541 1479906 1481396 - sialic_acid_transporter A5956_07285 ANE59542 1481505 1482398 - N-acetylneuraminate_lyase A5956_07290 ANE59543 1482520 1483311 - transcriptional_regulator_NanR A5956_07295 ANE59544 1483691 1485058 + C4-dicarboxylate_transporter A5956_07300 ANE59545 1485101 1485598 - ClpXP_protease_specificity-enhancing_factor A5956_07305 ANE59546 1485604 1486242 - stringent_starvation_protein_A sspA ANE59547 1486637 1487029 - 30S_ribosomal_protein_S9 A5956_07315 ANE59548 1487045 1487473 - 50S_ribosomal_protein_L13 A5956_07320 ANE59549 1487692 1488819 - hypothetical_protein A5956_07325 ANE59550 1489013 1489411 + hypothetical_protein A5956_07330 ANE59551 1489565 1490932 + serine_endoprotease_DegQ A5956_07335 ANE59552 1491022 1492089 + outer_membrane-stress_sensor_serine endopeptidase DegS A5956_07340 ANE59553 1492152 1493090 - malate_dehydrogenase A5956_07345 ANE59554 1493525 1493995 + arginine_repressor A5956_07350 ANE59555 1494360 1494623 + hypothetical_protein A5956_07355 ANE59556 1494679 1494951 - hypothetical_protein A5956_07360 ANE59557 1495043 1497010 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB A5956_07365 ANE59558 1497016 1497948 - efflux_transporter_periplasmic_adaptor_subunit A5956_07370 ANE62715 1497956 1498159 - transporter A5956_07375 ANE59559 1498342 1499271 + transcriptional_regulator A5956_07380 ANE59560 1499405 1500850 - metalloprotease_TldD tldD ANE59561 1501280 1505080 - hypothetical_protein A5956_07390 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 ANE59538 98 311 100.0 7e-106 PJR32598.1 ANE59541 99 990 100.0 0.0 PJR32599.1 ANE59542 100 611 100.0 0.0 PJR32600.1 ANE59543 100 537 100.0 0.0 >> 363. LM651928_0 Source: Shigella flexneri genome assembly NCTC1, chromosome : 1. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2448 Table of genes, locations, strands and annotations of subject cluster: CDX08634 3250811 3251368 + putative_ABC_superfamily_transport lptA CDX08635 3251375 3252100 + putative_ABC_transporter_ATP-binding_protein lptB CDX08636 3252148 3253581 + RNA_polymerase_factor_sigma-54,RNA_polymerase rpoN CDX08637 3253604 3253891 + putative_sigma(54)_modulation yfiA CDX08638 3254009 3254500 + PTS_system_transporter_subunit_IIA-like ptsN CDX08639 3254546 3255400 + glmZ(sRNA)-inactivating_NTPase,hypothetical yhbJ CDX08640 3255397 3255669 + phosphohistidinoprotein-hexose ptsO CDX08641 3255882 3256514 + hypothetical_protein,PhoP_regulatory_network protein YrbL NCTC1_03523 CDX08642 3256807 3257238 - monofunctional_biosynthetic_peptidoglycan mtgA CDX08643 3257235 3257888 - isoprenoid_biosynthesis_protein,Sigma yhbL CDX08644 3258118 3260454 - aerobic_respiration_control_sensor_protein arcB CDX08645 3260550 3261479 - radical_SAM_protein,coproporphyrinogen_III oxidase,radical SAM protein,Radical SAM superfamily NCTC1_03528 CDX08646 3262061 3266614 + glutamate_synthase,Glutamate_synthase_[NADPH] gltB CDX08647 3266627 3268045 + glutamate_synthase_subunit_beta,Glutamate gltD CDX08648 3268229 3268708 + Uncharacterized_conserved_protein,Protein_of unknown function (DUF1016) NCTC1_03531 CDX08649 3268783 3268971 + IS600_ORF1,Transposase NCTC1_03532 CDX08650 3268911 3269036 + IS600_ORF1 NCTC1_03533 CDX08651 3269086 3270261 + IS600_orf,Integrase_core_domain NCTC1_03534 CDX08652 3270337 3270801 - putative_Beta-galactosidase,_beta yjgK_1 CDX08653 3270798 3271673 - NAGC-like_transcriptional yhcI CDX08654 3271670 3272359 - N-acetylmannosamine-6-phosphate nanE CDX08655 3272407 3273897 - sialic_acid_transporter,Sialic_acid nanT CDX08656 3274007 3274900 - N-acetylneuraminate_lyase,N-acetylneuraminate nanA CDX08657 3275022 3275813 - transcriptional_regulator_NanR,L-lactate yhcK CDX08658 3276445 3276948 + IS1_protein_InsB,IS1_transposase NCTC1_03541 CDX08659 3276969 3278336 + putative_C4-dicarboxylate_transporter,Putative dcuD CDX08660 3278379 3278876 - ClpXP_protease_specificity-enhancing sspB CDX08661 3278882 3279520 - stringent_starvation_protein_A,Stringent sspA CDX08662 3279915 3280307 - 30S_ribosomal_protein_S9,30S_ribosomal_protein rpsI CDX08663 3280323 3280751 - 50S_ribosomal_protein_L13,50S_ribosomal_protein rplM CDX08664 3280970 3282097 - ATPase,hypothetical_protein,AFG1-like_ATPase yhcM CDX08665 3282291 3282689 + cytochrome_d_ubiquinol_oxidase_subunit yhcB CDX08666 3282843 3284000 + serine_endoprotease,Periplasmic_pH-dependent degQ_1 CDX08667 3283960 3284190 + serine_endoprotease,Periplasmic_pH-dependent degQ_2 CDX08668 3284280 3285347 + serine_endoprotease,Serine_endoprotease_DegS degS CDX08669 3285409 3286347 - malate_dehydrogenase,Malate_dehydrogenase,malate mdh CDX08670 3286782 3287252 + arginine_repressor,Arginine_repressor,arginine argR CDX08671 3287617 3287880 + protein_YcfR,Multiple_stress_resistance_protein ycfR_2 CDX08672 3287936 3288208 - putative_barnase_inhibitor,hypothetical protein,Barstar (barnase inhibitor) yhcO CDX08673 3288300 3290267 - p-hydroxybenzoic_acid_efflux_subunit aaeB_2 CDX08674 3290273 3291205 - p-hydroxybenzoic_acid_efflux_subunit_AaeA,Inner yhcQ CDX08675 3291213 3291416 - Protein_AaeX,efflux_system_membrane protein,Protein of unknown function (DUF1656) aaeX CDX08676 3291599 3292528 + putative_DNA-binding_transcriptional aaeR CDX08677 3292656 3294101 - protease_TldD,hypothetical_protein,protease tldD CDX08678 3294257 3298057 - hypothetical_protein,Uncharacterized_protein NCTC1_03561 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 CDX08652 98 311 100.0 7e-106 PJR32598.1 CDX08655 99 990 100.0 0.0 PJR32599.1 CDX08656 100 611 100.0 0.0 PJR32600.1 CDX08657 99 536 100.0 0.0 >> 364. CP050985_0 Source: Shigella flexneri strain FDAARGOS_716 chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2448 Table of genes, locations, strands and annotations of subject cluster: QIY45775 1371828 1372385 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QIY45776 1372392 1373117 + LPS_export_ABC_transporter_ATP-binding_protein lptB QIY45777 1373165 1374598 + RNA_polymerase_factor_sigma-54 rpoN QIY45778 1374621 1374908 + ribosome_hibernation_promoting_factor hpf QIY45779 1375026 1375517 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QIY45780 1375563 1376417 + RNase_adapter_RapZ rapZ QIY45781 1376414 1376686 + PTS_phosphocarrier_protein_NPr npr QIY45782 1378252 1378905 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIY45783 1379135 1381471 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIY45784 1381567 1382496 - TIGR01212_family_radical_SAM_protein FOC24_08265 QIY48513 1383171 1387631 + glutamate_synthase_large_subunit gltB QIY45785 1387644 1389062 + glutamate_synthase_subunit_GltD gltD QIY45786 1389246 1389725 + DUF1016_family_protein FOC24_08280 FOC24_08285 1389800 1390897 + IS3_family_transposase no_locus_tag QIY48514 1390973 1391278 + transposase FOC24_08290 QIY45787 1391354 1391818 - DUF386_domain-containing_protein FOC24_08295 QIY45788 1391815 1392690 - N-acetylmannosamine_kinase nanK QIY45789 1392687 1393376 - N-acetylmannosamine-6-phosphate_2-epimerase FOC24_08305 QIY45790 1393424 1394914 - sialic_acid_transporter_NanT nanT QIY45791 1395024 1395917 - N-acetylneuraminate_lyase nanA QIY45792 1396039 1396830 - transcriptional_regulator_NanR nanR FOC24_08325 1397268 1397965 + IS1_family_transposase no_locus_tag QIY45793 1397986 1399353 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIY45794 1399396 1399893 - ClpXP_protease_specificity-enhancing_factor sspB QIY45795 1399899 1400537 - stringent_starvation_protein_A sspA QIY45796 1400932 1401324 - 30S_ribosomal_protein_S9 rpsI QIY45797 1401340 1401768 - 50S_ribosomal_protein_L13 rplM QIY45798 1401987 1403114 - cell_division_protein_ZapE zapE QIY45799 1403308 1403706 + DUF1043_family_protein FOC24_08360 QIY45800 1405290 1406357 + outer_membrane-stress_sensor_serine endopeptidase DegS degS QIY45801 1406419 1407357 - malate_dehydrogenase mdh QIY45802 1407792 1408262 + transcriptional_regulator_ArgR argR QIY45803 1408627 1408890 + peroxide/acid_stress_response_protein_YhcN yhcN QIY45804 1408946 1409218 - hypothetical_protein FOC24_08390 QIY45805 1409310 1411277 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIY45806 1411283 1412215 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QIY45807 1412223 1412426 - AaeX_family_protein FOC24_08405 QIY45808 1412609 1413538 + HTH-type_transcriptional_activator_AaeR aaeR QIY45809 1413666 1415111 - metalloprotease_TldD tldD QIY45810 1415267 1419067 - AsmA2_domain-containing_protein FOC24_08420 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QIY45787 98 311 100.0 7e-106 PJR32598.1 QIY45790 99 990 100.0 0.0 PJR32599.1 QIY45791 100 611 100.0 0.0 PJR32600.1 QIY45792 99 536 100.0 0.0 >> 365. CP034060_0 Source: Shigella flexneri strain FDAARGOS_535 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2448 Table of genes, locations, strands and annotations of subject cluster: AZG49714 846593 847522 - HTH-type_transcriptional_activator_AaeR aaeR AZG49715 847705 847908 + protein_AaeX EGX88_05625 AZG49716 847916 848848 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AZG49717 848854 850821 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AZG49718 850913 851185 + hypothetical_protein EGX88_05640 AZG52794 851241 851504 - DUF1471_domain-containing_protein EGX88_05645 AZG49719 851869 852339 - transcriptional_regulator_ArgR argR AZG49720 852774 853712 + malate_dehydrogenase EGX88_05655 AZG49721 853774 854841 - serine_endoprotease_DegS degS AZG49722 856432 856830 - DUF1043_family_protein EGX88_05670 AZG49723 857024 858151 + cell_division_protein_ZapE zapE AZG49724 858371 858799 + 50S_ribosomal_protein_L13 EGX88_05680 AZG49725 858815 859207 + 30S_ribosomal_protein_S9 EGX88_05685 AZG49726 859602 860240 + stringent_starvation_protein_A EGX88_05690 AZG49727 860246 860743 + ClpXP_protease_specificity-enhancing_factor EGX88_05695 AZG49728 860786 862153 - C4-dicarboxylate_transporter_DcuC dcuC EGX88_05705 862174 862871 - IS1_family_transposase no_locus_tag AZG49729 863040 864313 + IS3-like_element_IS2_family_transposase EGX88_05710 EGX88_05715 864381 865078 - IS1_family_transposase no_locus_tag AZG49730 865412 866203 + transcriptional_regulator_NanR EGX88_05720 AZG49731 866325 867218 + N-acetylneuraminate_lyase nanA AZG49732 867328 868818 + MFS_transporter EGX88_05730 AZG49733 868866 869555 + N-acetylmannosamine-6-phosphate_2-epimerase EGX88_05735 AZG49734 869552 870427 + N-acetylmannosamine_kinase EGX88_05740 AZG49735 870424 870888 + YhcH/YjgK/YiaL_family_protein EGX88_05745 EGX88_05750 871279 872443 - IS3_family_transposase no_locus_tag EGX88_05755 872459 872530 + MerR_family_transcriptional_regulator no_locus_tag AZG49736 872518 872997 - DUF1016_family_protein EGX88_05760 AZG49737 873181 874599 - glutamate_synthase_small_subunit EGX88_05765 AZG49738 874612 879072 - glutamate_synthase_large_subunit EGX88_05770 AZG52795 879747 880676 + TIGR01212_family_radical_SAM_protein EGX88_05775 AZG49739 880772 883108 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB AZG49740 883338 883991 + isoprenoid_biosynthesis_protein_ElbB elbB EGX88_05790 883988 884715 + monofunctional_biosynthetic_peptidoglycan transglycosylase no_locus_tag AZG49741 884712 885338 - PhoP_regulatory_network_protein_YrbL yrbL AZG49742 885551 885823 - phosphocarrier_protein_NPr EGX88_05800 AZG49743 885820 886674 - RNase_adaptor_protein_RapZ EGX88_05805 AZG49744 886720 887211 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN AZG49745 887329 887616 - ribosome_hibernation_promoting_factor EGX88_05815 AZG49746 887639 889072 - RNA_polymerase_sigma-54_factor EGX88_05820 AZG49747 889120 889845 - ABC_transporter_ATP-binding_protein EGX88_05825 AZG49748 889852 890409 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA AZG49749 890378 890953 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AZG49735 98 311 100.0 7e-106 PJR32598.1 AZG49732 99 990 100.0 0.0 PJR32599.1 AZG49731 100 611 100.0 0.0 PJR32600.1 AZG49730 99 536 100.0 0.0 >> 366. CP030915_0 Source: Shigella flexneri 2a strain 1508 chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2448 Table of genes, locations, strands and annotations of subject cluster: AXC58967 4398431 4399876 + metalloprotease_TldD B5690_23690 AXC58968 4400004 4400933 - HTH-type_transcriptional_activator_AaeR B5690_23695 AXC58969 4401116 4401319 + protein_AaeX B5690_23700 AXC58970 4401327 4402259 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA B5690_23705 AXC58971 4402265 4404232 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB B5690_23710 AXC58972 4404324 4404596 + hypothetical_protein B5690_23715 AXC59411 4404652 4404915 - DUF1471_domain-containing_protein B5690_23720 AXC58973 4405280 4405750 - arginine_repressor B5690_23725 AXC58974 4406185 4407123 + malate_dehydrogenase B5690_23730 AXC58975 4407185 4408252 - serine_endoprotease_DegS B5690_23735 B5690_23740 4408342 4409689 - serine_endoprotease_DegQ no_locus_tag AXC58976 4409843 4410241 - DUF1043_domain-containing_protein B5690_23745 AXC58977 4410435 4411562 + cell_division_protein_ZapE B5690_23750 AXC58978 4411781 4412209 + 50S_ribosomal_protein_L13 B5690_23755 AXC58979 4412225 4412617 + 30S_ribosomal_protein_S9 B5690_23760 AXC59412 4412861 4413070 - hypothetical_protein B5690_23765 AXC58980 4413012 4413650 + stringent_starvation_protein_A B5690_23770 AXC58981 4413656 4414153 + stringent_starvation_protein_B B5690_23775 AXC58982 4414196 4415563 - C4-dicarboxylate_transporter B5690_23780 B5690_23785 4415584 4416281 - IS1_family_transposase no_locus_tag AXC58983 4416719 4417510 + transcriptional_regulator_NanR nanR AXC58984 4417632 4418525 + N-acetylneuraminate_lyase nanA AXC58985 4418635 4420125 + MFS_transporter B5690_23800 AXC58986 4420173 4420862 + N-acetylmannosamine-6-phosphate_2-epimerase B5690_23805 AXC58987 4420859 4421734 + N-acetylmannosamine_kinase B5690_23810 AXC58988 4421731 4422195 + YhcH/YjgK/YiaL_family_protein B5690_23815 B5690_23820 4422586 4423749 - IS3_family_transposase no_locus_tag B5690_23825 4423765 4423836 + MerR_family_transcriptional_regulator no_locus_tag AXC58989 4423824 4424303 - DUF1016_domain-containing_protein B5690_23830 AXC58990 4424487 4425905 - glutamate_synthase_small_subunit B5690_23835 AXC58991 4425918 4430378 - glutamate_synthase_large_subunit B5690_23840 B5690_23845 4430301 4430527 + hypothetical_protein no_locus_tag AXC58992 4430425 4430661 + hypothetical_protein B5690_23850 AXC59413 4431053 4431982 + TIGR01212_family_radical_SAM_protein B5690_23855 AXC58993 4432078 4434414 + hybrid_sensor_histidine_kinase/response regulator B5690_23860 AXC58994 4434644 4435297 + glutamine_amidotransferase B5690_23865 B5690_23870 4435294 4436021 + monofunctional_biosynthetic_peptidoglycan transglycosylase no_locus_tag AXC58995 4436018 4436650 - protein_YrbL yrbL AXC58996 4436863 4437135 - phosphocarrier_protein_NPr B5690_23880 AXC58997 4437132 4437986 - RNase_adaptor_protein_RapZ B5690_23885 AXC58998 4438032 4438523 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN B5690_23890 AXC58999 4438641 4438928 - ribosome_hibernation_promoting_factor B5690_23895 AXC59000 4438951 4440384 - RNA_polymerase_sigma-54_factor B5690_23900 AXC59001 4440432 4441157 - ABC_transporter_ATP-binding_protein B5690_23905 AXC59002 4441164 4441721 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA B5690_23910 AXC59003 4441690 4442265 - LPS_export_ABC_transporter_periplasmic_protein LptC B5690_23915 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AXC58988 98 311 100.0 7e-106 PJR32598.1 AXC58985 99 990 100.0 0.0 PJR32599.1 AXC58984 100 611 100.0 0.0 PJR32600.1 AXC58983 99 536 100.0 0.0 >> 367. CP012735_0 Source: Shigella flexneri 1a strain 0228, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2448 Table of genes, locations, strands and annotations of subject cluster: AMM77749 1559427 1560872 + protease_TldD tldD AMM77750 1561000 1561929 - transcriptional_regulator AOT98_08055 AMM80693 1562112 1562315 + transporter AOT98_08060 AMM77751 1562323 1563255 + p-hydroxybenzoic_acid_efflux_subunit_AaeA AOT98_08065 AMM77752 1563261 1565228 + p-hydroxybenzoic_acid_efflux_subunit_AaeB AOT98_08070 AMM77753 1565320 1565592 + hypothetical_protein AOT98_08075 AMM80694 1565648 1565911 - hypothetical_protein AOT98_08080 AMM77754 1566276 1566746 - arginine_repressor AOT98_08085 AMM77755 1567181 1568119 + malate_dehydrogenase AOT98_08090 AMM77756 1568181 1569248 - serine_endoprotease AOT98_08095 AMM80695 1570839 1571237 - hypothetical_protein AOT98_08105 AMM77757 1571431 1572558 + hypothetical_protein AOT98_08110 AMM77758 1572777 1573205 + 50S_ribosomal_protein_L13 AOT98_08115 AMM77759 1573221 1573613 + 30S_ribosomal_protein_S9 AOT98_08120 AMM77760 1574008 1574646 + stringent_starvation_protein_A sspA AMM77761 1574652 1575149 + Clp_protease_ClpP AOT98_08130 AMM77762 1575192 1576559 - C4-dicarboxylate_transporter AOT98_08135 AMM77763 1576580 1576975 - transposase AOT98_08140 AMM77764 1577002 1577226 - transposase AOT98_08145 AMM77765 1577715 1578506 + transcriptional_regulator_NanR AOT98_08150 AMM77766 1578628 1579521 + N-acetylneuraminate_lyase AOT98_08155 AMM77767 1579631 1581121 + sialic_acid_transporter AOT98_08160 AMM77768 1581169 1581858 + N-acetylmannosamine-6-phosphate_2-epimerase AOT98_08165 AMM77769 1581855 1582730 + N-acetylmannosamine_kinase AOT98_08170 AMM77770 1582727 1583191 + hypothetical_protein AOT98_08175 AMM80696 1583267 1583572 - transposase AOT98_08180 AOT98_08185 1583582 1584442 - hypothetical_protein no_locus_tag AMM77771 1584492 1584617 - transposase AOT98_08190 AOT98_08195 1584895 1585299 - hypothetical_protein no_locus_tag AMM77772 1585483 1586901 - glutamate_synthase AOT98_08200 AMM80697 1586914 1591374 - glutamate_synthase gltB AMM80698 1592049 1592978 + radical_SAM_protein AOT98_08210 AMM77773 1593074 1595410 + aerobic_respiration_control_sensor_protein_ArcB AOT98_08215 AMM77774 1595640 1596293 + isoprenoid_biosynthesis_protein AOT98_08220 AMM77775 1597014 1597646 - hypothetical_protein AOT98_08230 AMM77776 1597859 1598131 - phosphohistidinoprotein-hexose phosphotransferase AOT98_08235 AMM77777 1598128 1598982 - glmZ(sRNA)-inactivating_NTPase AOT98_08240 AMM77778 1599028 1599519 - transcriptional_regulator AOT98_08245 AMM77779 1599637 1599924 - hypothetical_protein AOT98_08250 AMM77780 1599947 1601380 - RNA_polymerase_sigma-54_factor AOT98_08255 AMM77781 1601428 1602153 - LPS_export_ABC_transporter_ATP-binding_protein AOT98_08260 AMM77782 1602160 1602717 - lipopolysaccharide_transporter AOT98_08265 AMM77783 1602686 1603261 - LPS_export_ABC_transporter_periplasmic_protein LptC AOT98_08270 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AMM77770 98 311 100.0 7e-106 PJR32598.1 AMM77767 99 990 100.0 0.0 PJR32599.1 AMM77766 100 611 100.0 0.0 PJR32600.1 AMM77765 99 536 100.0 0.0 >> 368. CP007037_0 Source: Shigella flexneri G1663, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2448 Table of genes, locations, strands and annotations of subject cluster: AKK55710 3330689 3331246 + sugar_ABC_transporter_substrate-binding_protein SF2A_17695 AKK55711 3331253 3331978 + lipopolysaccharide_ABC_transporter_ATP-binding protein SF2A_17700 AKK55712 3332026 3333459 + RNA_polymerase_factor_sigma-54 SF2A_17705 AKK55713 3333482 3333769 + ribosome_hibernation_promoting_factor_HPF SF2A_17710 AKK55714 3333887 3334378 + PTS_sugar_transporter_subunit_IIA SF2A_17715 AKK55715 3334424 3335278 + glmZ(sRNA)-inactivating_NTPase SF2A_17720 AKK55716 3335275 3335547 + phosphohistidinoprotein-hexose phosphotransferase SF2A_17725 AKK55717 3337113 3337766 - isoprenoid_biosynthesis_protein SF2A_17740 AKK55718 3337996 3340332 - aerobic_respiration_control_sensor_protein_ArcB SF2A_17745 AKK55719 3340428 3341357 - hypothetical_protein SF2A_17750 AKK55720 3341403 3341507 - hypothetical_protein SF2A_17755 AKK55721 3342032 3346492 + glutamate_synthase_subunit_alpha gltB AKK55722 3346505 3347923 + glutamate_synthase_subunit_beta SF2A_17765 AKK55723 3348107 3348586 + hypothetical_protein SF2A_17770 AKK55724 3349069 3350139 + integrase SF2A_17780 AKK55725 3350215 3350679 - hypothetical_protein SF2A_17785 AKK55726 3350676 3351551 - N-acetylmannosamine_kinase SF2A_17790 AKK55727 3351548 3352237 - N-acetylmannosamine-6-phosphate_2-epimerase SF2A_17795 AKK55728 3352285 3353775 - sialic_acid_transporter SF2A_17800 AKK55729 3353885 3354778 - N-acetylneuraminate_lyase SF2A_17805 AKK55730 3354900 3355691 - transcriptional_regulator SF2A_17810 AKK55731 3356847 3358214 + C4-dicarboxylate_ABC_transporter SF2A_17820 AKK55732 3358257 3358754 - peptidase SF2A_17825 AKK55733 3358760 3359398 - stringent_starvation_protein_A sspA AKK55734 3359793 3360185 - 30S_ribosomal_protein_S9 SF2A_17835 AKK55735 3360201 3360629 - 50S_ribosomal_protein_L13 SF2A_17840 AKK55736 3360848 3361975 - hypothetical_protein SF2A_17845 AKK55737 3362169 3362567 + hypothetical_protein SF2A_17850 AKK55738 3364158 3365225 + serine_endoprotease SF2A_17860 AKK55739 3365287 3366225 - malate_dehydrogenase SF2A_17865 AKK55740 3366660 3367130 + arginine_repressor SF2A_17870 AKK55741 3367495 3367758 + membrane_protein SF2A_17875 AKK55742 3367814 3368086 - hypothetical_protein SF2A_17880 AKK55743 3368178 3370145 - hydroxybenzoic_acid_transporter SF2A_17885 AKK55744 3370151 3371083 - hydroxybenzoic_acid_transporter SF2A_17890 AKK55745 3371091 3371294 - electron_transfer_flavoprotein_FixA SF2A_17895 AKK55746 3371477 3372406 + transcriptional_regulator SF2A_17900 AKK55747 3372534 3373979 - protease_TldD tldD AKK55748 3374135 3377935 - membrane_protein SF2A_17910 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AKK55725 98 311 100.0 7e-106 PJR32598.1 AKK55728 99 990 100.0 0.0 PJR32599.1 AKK55729 100 611 100.0 0.0 PJR32600.1 AKK55730 99 536 100.0 0.0 >> 369. CP038180_0 Source: Escherichia coli strain 2 HS-C chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2423 Table of genes, locations, strands and annotations of subject cluster: QBR14408 488984 490429 + metalloprotease_TldD tldD QBR14409 490563 491492 - HTH-type_transcriptional_activator_AaeR aaeR QBR14410 491675 491878 + DUF1656_domain-containing_protein E4F32_02400 QBR14411 491886 492818 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QBR14412 492824 494791 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QBR14413 494883 495155 + hypothetical_protein E4F32_02415 QBR14414 495211 495474 - peroxide/acid_stress_response_protein_YhcN yhcN QBR14415 495839 496309 - transcriptional_regulator_ArgR argR QBR14416 496744 497682 + malate_dehydrogenase mdh QBR14417 497745 498812 - serine_endoprotease_DegS E4F32_02435 QBR14418 498902 500269 - serine_endoprotease_DegQ degQ QBR14419 500423 500821 - DUF1043_family_protein E4F32_02445 QBR14420 501015 502142 + cell_division_protein_ZapE E4F32_02450 QBR14421 502361 502789 + 50S_ribosomal_protein_L13 rplM QBR14422 502805 503197 + 30S_ribosomal_protein_S9 rpsI QBR14423 503592 504230 + stringent_starvation_protein_A sspA QBR14424 504236 504733 + ClpXP_protease_specificity-enhancing_factor sspB QBR14425 504776 506143 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QBR14426 506523 507314 + transcriptional_regulator_NanR nanR QBR14427 507436 508329 + N-acetylneuraminate_lyase nanA QBR14428 508438 509928 + sialic_acid_transporter_NanT nanT QBR14429 509976 510665 + N-acetylmannosamine-6-phosphate_2-epimerase E4F32_02495 QBR14430 510662 511537 + N-acetylmannosamine_kinase E4F32_02500 QBR14431 511534 511998 + YhcH/YjgK/YiaL_family_protein E4F32_02505 QBR14432 512074 512379 - transposase E4F32_02510 QBR14433 512396 512875 - DUF1016_family_protein E4F32_02515 QBR14434 513059 514477 - glutamate_synthase_small_subunit E4F32_02520 QBR14435 514490 518950 - glutamate_synthase_large_subunit gltB QBR14436 519625 520554 + TIGR01212_family_radical_SAM_protein E4F32_02530 QBR14437 520650 522986 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QBR14438 523216 523869 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QBR14439 523866 524594 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QBR14440 524591 525223 - PhoP_regulatory_network_protein_YrbL yrbL QBR14441 525437 525709 - PTS_phosphocarrier_protein_NPr npr QBR14442 525706 526560 - RNase_adapter_RapZ rapZ QBR14443 526606 527097 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QBR14444 527215 527502 - ribosome_hibernation_promoting_factor E4F32_02570 QBR14445 527525 528958 - RNA_polymerase_factor_sigma-54 rpoN QBR14446 529006 529731 - lipopolysaccharide_ABC_transporter_ATP-binding protein E4F32_02580 QBR14447 529738 530295 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QBR14448 530264 530839 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QBR14449 530836 531402 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QBR14450 531423 532409 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QBR14431 98 314 100.0 3e-107 PJR32596.1 QBR14430 97 508 100.0 5e-179 PJR32598.1 QBR14428 99 990 100.0 0.0 PJR32599.1 QBR14427 100 611 100.0 0.0 >> 370. CP026641_0 Source: Escherichia coli strain FORC_082 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2423 Table of genes, locations, strands and annotations of subject cluster: QAZ70207 512471 513916 + TldD_protein,_part_of_TldE/TldD_proteolytic complex FORC82_0516 QAZ70208 514044 514955 - HTH-type_transcriptional_activator_AaeR FORC82_0517 QAZ70209 515087 515359 + protein_AaeX FORC82_0518 QAZ70210 515367 516299 + Membrane_fusion_component_of_tripartite multidrug resistance FORC82_0519 QAZ70211 516305 518272 + FUSARIC_ACID_RESISTANCE_PROTEIN_FUSB_/_FUSARIC ACID RESIST FORC82_0520 QAZ70212 518364 518636 + hypothetical_protein FORC82_0521 QAZ70213 518691 518954 - DUF1471_domain-containing_protein FORC82_0522 QAZ70214 519318 519788 - Arginine_pathway_regulatory_protein_ArgR, repressor of arg FORC82_0523 QAZ70215 520223 521161 + Malate_dehydrogenase FORC82_0524 QAZ70216 521223 522290 - Outer_membrane_stress_sensor_protease_DegS FORC82_0525 QAZ70217 522380 523747 - Outer_membrane_stress_sensor_protease_DegQ, serine protease FORC82_0526 QAZ70218 523901 524299 - Putative_cytochrome_d_ubiquinol_oxidase_subunit III FORC82_0527 QAZ70219 524493 525620 + ATPase,_AFG1_family FORC82_0528 QAZ70220 525839 526267 + LSU_ribosomal_protein_L13p_(L13Ae) FORC82_0529 QAZ70221 526283 526675 + SSU_ribosomal_protein_S9p_(S16e) FORC82_0530 QAZ70222 527070 527708 + Stringent_starvation_protein_A FORC82_0531 QAZ70223 527714 528211 + ClpXP_protease_specificity-enhancing_factor FORC82_0532 QAZ70224 528254 528562 - C4-dicarboxylate_transporter FORC82_0533 QAZ70225 528562 529620 - Putative_cryptic_C4-dicarboxylate_transporter DcuD FORC82_0534 QAZ70226 530009 530791 + Transcriptional_regulator_NanR FORC82_0535 QAZ70227 530913 531806 + N-acetylneuraminate_lyase FORC82_0536 QAZ70228 531915 533405 + Sialic_acid_transporter_(permease)_NanT FORC82_0537 QAZ70229 533453 534142 + N-acetylmannosamine-6-phosphate_2-epimerase FORC82_0538 QAZ70230 534139 535014 + N-acetylmannosamine_kinase FORC82_0539 QAZ70231 535011 535475 + YhcH/YjgK/YiaL_family_protein FORC82_0540 QAZ70232 535658 536161 - Mobile_element_protein FORC82_0541 QAZ70233 536406 536633 - transposase FORC82_0542 QAZ70234 536555 536680 + hypothetical_protein FORC82_0543 QAZ70235 536650 537129 - Putative_uncharacterized_protein_YhcG FORC82_0544 QAZ70236 537313 538731 - Glutamate_synthase_(NADPH)_small_chain FORC82_0545 QAZ70237 538744 543204 - Glutamate_synthase_(NADPH)_large_chain FORC82_0546 QAZ70238 543728 543832 + hypothetical_protein FORC82_0547 QAZ70239 543878 544807 + Fe-S_oxidoreductase FORC82_0548 QAZ70240 544903 547239 + Aerobic_respiration_control_sensor_protein_arcB FORC82_0549 QAZ70241 547469 547771 + Sigma_cross-reacting_protein_27A FORC82_0550 QAZ70242 547837 548121 + Sigma_cross-reacting_protein_27A FORC82_0551 QAZ70243 548118 548846 + Monofunctional_biosynthetic_peptidoglycan transglycosylase FORC82_0552 QAZ70244 548843 549475 - Putative_uncharacterized_protein_YrbL FORC82_0553 QAZ70245 549688 549960 - Phosphocarrier_protein,_nitrogen_regulation associated FORC82_0554 QAZ70246 549957 550811 - putative_ATP-binding_protein,_contains_P-loop FORC82_0555 QAZ70247 550857 551348 - PTS_system_nitrogen-specific_IIA_component, PtsN FORC82_0556 QAZ70248 551466 551753 - Ribosome_hibernation_protein_YhbH FORC82_0557 QAZ70249 551776 553209 - RNA_polymerase_sigma-54_factor_RpoN FORC82_0558 QAZ70250 553257 553982 - Lipopolysaccharide_ABC_transporter,_ATP-binding protein Lp FORC82_0559 QAZ70251 553989 554546 - LptA,_protein_essential_for_LPS_transport_across the perip FORC82_0560 QAZ70252 554515 555090 - LPS_export_ABC_transporter_periplasmic_protein LptC FORC82_0561 QAZ70253 555087 555653 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase FORC82_0562 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QAZ70231 98 314 100.0 3e-107 PJR32596.1 QAZ70230 97 508 100.0 5e-179 PJR32598.1 QAZ70228 99 990 100.0 0.0 PJR32599.1 QAZ70227 100 611 100.0 0.0 >> 371. CP000946_0 Source: Escherichia coli ATCC 8739, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2423 Table of genes, locations, strands and annotations of subject cluster: ACA76139 503669 505114 + peptidase_U62_modulator_of_DNA_gyrase EcolC_0462 ACA76140 505248 506177 - transcriptional_regulator,_LysR_family EcolC_0463 ACA76141 506360 506563 + protein_of_unknown_function_DUF1656 EcolC_0464 ACA76142 506571 507503 + efflux_transporter,_RND_family,_MFP_subunit EcolC_0465 ACA76143 507509 509476 + Fusaric_acid_resistance_protein_conserved region EcolC_0466 ACA76144 509568 509840 + conserved_hypothetical_protein EcolC_0467 ACA76145 509896 510159 - protein_of_unknown_function_DUF1471 EcolC_0468 ACA76146 510524 510994 - arginine_repressor,_ArgR EcolC_0469 ACA76147 511429 512367 + malate_dehydrogenase,_NAD-dependent EcolC_0470 ACA76148 512430 513497 - periplasmic_serine_protease_DegS EcolC_0471 ACA76149 513587 514954 - protease_Do EcolC_0472 ACA76150 515108 515506 - protein_of_unknown_function_DUF1043 EcolC_0473 ACA76151 515700 516827 + AFG1-family_ATPase EcolC_0474 ACA76152 517046 517474 + ribosomal_protein_L13 EcolC_0475 ACA76153 517490 517882 + ribosomal_protein_S9 EcolC_0476 ACA76154 518277 518915 + Glutathione_S-transferase_domain EcolC_0477 ACA76155 518921 519418 + Stringent_starvation_protein_B EcolC_0478 ACA76156 519461 520828 - anaerobic_c4-dicarboxylate_antiporter,_DcuC family EcolC_0479 ACA76157 521208 521999 + GntR_domain_protein EcolC_0480 ACA76158 522121 523014 + N-acetylneuraminate_lyase EcolC_0481 ACA76159 523123 524613 + sialic_acid_transporter EcolC_0482 ACA76160 524661 525350 + N-acylglucosamine-6-phosphate_2-epimerase EcolC_0483 ACA76161 525347 526222 + ROK_family_protein EcolC_0484 ACA76162 526219 526683 + conserved_hypothetical_protein EcolC_0485 ACA76163 527081 527560 - protein_of_unknown_function_DUF1016 EcolC_0486 ACA76164 527744 529162 - glutamate_synthase,_small_subunit EcolC_0487 ACA76165 529175 533743 - Glutamate_synthase_(ferredoxin) EcolC_0488 ACA76166 534277 535239 + conserved_hypothetical_radical_SAM_protein EcolC_0489 ACA76167 535335 537671 + multi-sensor_hybrid_histidine_kinase EcolC_0490 ACA76168 537901 538554 + ThiJ/PfpI_domain_protein EcolC_0491 ACA76169 538551 539279 + monofunctional_biosynthetic_peptidoglycan transglycosylase EcolC_0492 ACA76170 539276 539908 - conserved_hypothetical_protein EcolC_0493 ACA76171 540121 540393 - Phosphotransferase_system,_phosphocarrier protein HPr EcolC_0494 ACA76172 540390 541244 - conserved_hypothetical_protein EcolC_0495 ACA76173 541290 541781 - PTS_IIA-like_nitrogen-regulatory_protein_PtsN EcolC_0496 ACA76174 541899 542186 - sigma_54_modulation_protein/ribosomal_protein S30EA EcolC_0497 ACA76175 542209 543642 - RNA_polymerase,_sigma_54_subunit,_RpoN EcolC_0498 ACA76176 543690 544415 - ABC_transporter_related EcolC_0499 ACA76177 544422 544979 - lipopolysaccharide_transport_periplasmic_protein LptA EcolC_0500 ACA76178 544948 545523 - protein_of_unknown_function_DUF1239 EcolC_0501 ACA76179 545520 546086 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase, YrbI family EcolC_0502 ACA76180 546107 547093 - KpsF/GutQ_family_protein EcolC_0503 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 ACA76162 98 314 100.0 3e-107 PJR32596.1 ACA76161 97 508 100.0 5e-179 PJR32598.1 ACA76159 99 990 100.0 0.0 PJR32599.1 ACA76158 100 611 100.0 0.0 >> 372. CP006834_0 Source: Escherichia coli APEC O2-211 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2131 Table of genes, locations, strands and annotations of subject cluster: AKK40729 4686685 4687671 + arabinose-5-phosphate_isomerase_KdsD APECO2_19515 AKK40730 4687692 4688258 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC APECO2_19520 AKK40731 4688255 4688830 + LPS_export_ABC_transporter_periplasmic_protein LptC APECO2_19525 AKK40732 4688799 4689356 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA APECO2_19530 AKK40733 4689363 4690088 + ABC_transporter_ATP-binding_protein APECO2_19535 AKK40734 4690136 4691569 + RNA_polymerase_sigma-54_factor APECO2_19540 AKK40735 4691592 4691879 + ribosome_hibernation_promoting_factor APECO2_19545 AKK40736 4691997 4692488 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN APECO2_19550 AKK40737 4692534 4693388 + RNase_adaptor_protein_RapZ APECO2_19555 AKK40738 4693385 4693657 + phosphocarrier_protein_NPr APECO2_19560 AKK40739 4693870 4694502 + PhoP_regulatory_network_protein_YrbL APECO2_19565 AKK40740 4694499 4695227 - monofunctional_biosynthetic_peptidoglycan transglycosylase APECO2_19570 AKK40741 4695224 4695877 - glutamine_amidotransferase APECO2_19575 AKK40742 4696107 4698443 - hybrid_sensor_histidine_kinase/response regulator APECO2_19580 AKK40743 4698539 4699468 - TIGR01212_family_radical_SAM_protein APECO2_19585 AXF92125 4699860 4700096 - hypothetical_protein APECO2_27565 APECO2_27570 4699994 4700220 - hypothetical_protein no_locus_tag AKK40745 4700143 4704603 + glutamate_synthase_large_subunit APECO2_19595 AKK40746 4704616 4706034 + glutamate_synthase_small_subunit APECO2_19600 AKK40747 4706218 4707345 + DUF1016_domain-containing_protein APECO2_19605 AKK40748 4707405 4707869 - YhcH/YjgK/YiaL_family_protein APECO2_19610 AKK40749 4707866 4708741 - ROK_family_protein APECO2_19615 AKK40750 4708738 4709427 - N-acetylmannosamine-6-phosphate_2-epimerase APECO2_19620 AKK40751 4709475 4710965 - MFS_transporter APECO2_19625 AKK40752 4711075 4711968 - N-acetylneuraminate_lyase nanA AKK40753 4712090 4712881 - transcriptional_regulator_NanR APECO2_19635 APECO2_27575 4713151 4713261 - transposase no_locus_tag AKK40754 4713261 4714628 + C4-dicarboxylate_transporter_DcuC APECO2_19640 AKK40755 4714672 4715169 - stringent_starvation_protein_B APECO2_19645 AKK40756 4715175 4715813 - stringent_starvation_protein_A APECO2_19650 AXF92126 4715755 4715964 + hypothetical_protein APECO2_27580 AKK40757 4716208 4716600 - 30S_ribosomal_protein_S9 APECO2_19655 AKK40758 4716616 4717044 - 50S_ribosomal_protein_L13 APECO2_19660 AKK40759 4717263 4718390 - cell_division_protein_ZapE APECO2_19665 AKK40760 4718584 4718982 + DUF1043_family_protein APECO2_19670 AKK40761 4719136 4720503 + serine_endoprotease_DegQ APECO2_19675 AKK40762 4720593 4721660 + serine_endoprotease_DegS APECO2_19680 AKK40763 4721723 4722661 - malate_dehydrogenase APECO2_19685 AKK40764 4723096 4723566 + transcriptional_regulator_ArgR APECO2_19690 AKK40765 4723932 4724195 + DUF1471_domain-containing_protein APECO2_19695 AKK40766 4724250 4724522 - hypothetical_protein APECO2_19700 AKK40767 4724614 4726581 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB APECO2_19705 AKK40768 4726587 4727519 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA APECO2_19710 AKK40769 4727527 4727730 - protein_AaeX APECO2_19715 AKK40770 4727913 4728842 + HTH-type_transcriptional_activator_AaeR APECO2_19720 AKK40771 4728970 4730415 - metalloprotease_TldD APECO2_19725 AKK40772 4730571 4734371 - AsmA2_domain-containing_protein APECO2_19730 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKK40747 90 691 107.449856734 0.0 PJR32595.1 AKK40748 97 292 100.0 1e-98 PJR32599.1 AKK40752 100 611 100.0 0.0 PJR32600.1 AKK40753 100 537 100.0 0.0 >> 373. LR134092_0 Source: Escherichia coli strain NCTC10444 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2118 Table of genes, locations, strands and annotations of subject cluster: VDZ29482 543201 544646 + TldD_protein tldD VDZ29483 544780 545709 - LysR_family_transcriptional_regulator aaeR VDZ29484 545892 546095 + protein_AaeX aaeX VDZ29485 546103 547035 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VDZ29486 547041 549008 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VDZ29487 549100 549372 + barnase_inhibitor yhcO VDZ29488 549435 549698 - protein_YcfR ycfR VDZ29489 550063 550533 - arginine_repressor argR VDZ29490 550968 551906 + malate_dehydrogenase mdh VDZ29491 552028 553356 + transposase_insG NCTC10444_00534 VDZ29492 553407 554474 - protease degS VDZ29493 554564 555931 - serine_endoprotease degQ VDZ29494 556085 556483 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VDZ29495 556677 557804 + putative_ATP/GTP-binding_protein yhcM VDZ29496 558023 558451 + 50S_ribosomal_protein_L13 rplM VDZ29497 558467 558859 + 30S_ribosomal_protein_S9 rpsI VDZ29498 559254 559892 + stringent_starvation_protein_A sspA VDZ29499 559898 560395 + stringent_starvation_protein_B sspB VDZ29500 560437 561804 - C4-dicarboxylate_transporter dcuD VDZ29501 562184 562975 + GntR_family_transcriptional_regulator nanR VDZ29502 563097 563990 + N-acetylneuraminate_lyase nanA VDZ29503 564099 565589 + sialic_acid_transporter nanT VDZ29504 565637 566326 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VDZ29505 566323 567198 + putative_transcriptional_regulator nanK VDZ29506 567195 567659 + beta-galactosidase yhcH VDZ29507 567719 568846 - protein yhcG VDZ29508 569030 570448 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VDZ29509 570461 574921 - glutamate_synthase_subunit_alpha gltB VDZ29510 575595 576524 + putative_radical_SAM_protein NCTC10444_00553 VDZ29511 576620 578956 + aerobic_respiration_control_protein arcB VDZ29512 579186 579839 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VDZ29513 579836 580564 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VDZ29514 580561 581193 - protein yrbL VDZ29515 581406 581678 - phosphocarrier_protein ptsO VDZ29516 581675 582529 - putative_ATPase yhbJ VDZ29517 582575 583066 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN VDZ29518 583184 583471 - putative_sigma(54)_modulation_protein yhbH VDZ29519 583494 584927 - RNA_polymerase_sigma-54_factor_(sigma-N) rpoN VDZ29520 584975 585700 - lipopolysaccharide_ABC_transporter lptB VDZ29521 585707 586264 - lipopolysaccharide_transport_periplasmic_protein LptA yhbN VDZ29522 586233 586808 - putative_organic_solvent_tolerance_protein lptC VDZ29523 586805 587371 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC VDZ29524 587392 588378 - D-arabinose_5-phosphate_isomerase kdsD VDZ29525 588392 589369 - calcium/sodium:proton_antiporter yrbG Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VDZ29507 91 699 107.449856734 0.0 PJR32595.1 VDZ29506 100 318 100.0 6e-109 PJR32596.1 VDZ29505 98 564 100.0 0.0 PJR32600.1 VDZ29501 100 537 100.0 0.0 >> 374. LR134081_0 Source: Escherichia coli strain NCTC9033 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2117 Table of genes, locations, strands and annotations of subject cluster: VDY98027 570896 571954 + TldD_protein tldD_1 VDY98029 571974 572342 + TldD_protein tldD_2 VDY98031 572476 572682 - LysR_family_transcriptional_regulator aaeR_1 VDY98033 572682 573404 - LysR_family_transcriptional_regulator aaeR_2 VDY98035 573587 573790 + protein_AaeX aaeX VDY98037 573798 574256 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VDY98039 574291 574731 + p-hydroxybenzoic_acid_efflux_pump_subunit_aaeA yhcQ VDY98041 574737 575450 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VDY98043 575528 576133 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_2 VDY98045 576157 576381 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_3 VDY98047 576381 576701 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_4 VDY98049 576917 577063 + barnase_inhibitor yhcO VDY98051 577263 577388 - Uncharacterised_protein NCTC9033_00620 VDY98053 577753 578223 - arginine_repressor argR VDY98055 578658 579596 + malate_dehydrogenase mdh VDY98057 579659 580726 - protease degS VDY98059 580816 582051 - serine_endoprotease degQ_1 VDY98061 582021 582182 - serine_endoprotease degQ_2 VDY98063 582336 582785 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VDY98065 583083 584054 + putative_ATP/GTP-binding_protein yhcM VDY98067 584485 584697 + 50S_ribosomal_protein_L13 rplM VDY98069 584713 585105 + 30S_ribosomal_protein_S9 rpsI VDY98071 585500 586138 + stringent_starvation_protein_A sspA VDY98073 586144 586641 + stringent_starvation_protein_B sspB VDY98075 586683 588050 - C4-dicarboxylate_transporter dcuD VDY98077 588430 589221 + GntR_family_transcriptional_regulator nanR VDY98079 589343 590236 + N-acetylneuraminate_lyase nanA VDY98081 590345 591406 + sialic_acid_transporter nanT_1 VDY98083 591388 591834 + sialic_acid_transporter nanT_2 VDY98085 591882 592571 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VDY98087 592568 593443 + putative_transcriptional_regulator nanK VDY98089 593440 593904 + beta-galactosidase yhcH VDY98091 593964 595091 - protein yhcG VDY98093 595275 596693 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VDY98094 596706 599687 - glutamate_synthase_subunit_alpha gltB_1 VDY98096 599627 601165 - glutamate_synthase_subunit_alpha gltB_2 VDY98098 601839 602768 + putative_radical_SAM_protein NCTC9033_00644 VDY98100 602863 603207 + aerobic_respiration_control_protein arcB_1 VDY98102 603410 605197 + aerobic_respiration_control_protein arcB_2 VDY98104 605427 606080 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VDY98106 606077 606805 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VDY98108 606802 607434 - protein yrbL VDY98110 607984 608703 - putative_ATPase yhbJ VDY98112 608869 609300 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN VDY98114 609451 609717 - putative_sigma(54)_modulation_protein yhbH VDY98116 609753 610682 - RNA_polymerase_sigma-54_factor_(sigma-N) rpoN_1 VDY98118 610712 611173 - RNA_polymerase_sigma-54_factor_(sigma-N) rpoN_2 VDY98120 611221 611946 - lipopolysaccharide_ABC_transporter lptB VDY98122 611953 612510 - lipopolysaccharide_transport_periplasmic_protein LptA yhbN VDY98124 612479 613054 - putative_organic_solvent_tolerance_protein lptC VDY98126 613051 613617 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC VDY98128 613638 614624 - D-arabinose_5-phosphate_isomerase kdsD VDY98130 614638 615615 - calcium/sodium:proton_antiporter yrbG Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VDY98091 91 699 107.449856734 0.0 PJR32595.1 VDY98089 99 317 100.0 2e-108 PJR32596.1 VDY98087 98 564 100.0 0.0 PJR32600.1 VDY98077 100 537 100.0 0.0 >> 375. CP034953_0 Source: Escherichia coli strain MT102 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2110 Table of genes, locations, strands and annotations of subject cluster: QAA88284 491542 492987 + metalloprotease_TldD tldD QAA88285 493121 494050 - HTH-type_transcriptional_activator_AaeR aaeR QAA88286 494233 494436 + DUF1656_domain-containing_protein EPB33_02380 QAA88287 494444 495376 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QAA88288 495382 497349 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QAA88289 497441 497713 + hypothetical_protein EPB33_02395 QAA88290 497769 498032 - peroxide/acid_stress_response_protein_YhcN yhcN QAA88291 498397 498867 - transcriptional_regulator_ArgR argR QAA88292 499302 500240 + malate_dehydrogenase EPB33_02410 QAA88293 500303 501370 - serine_endoprotease_DegS degS QAA88294 501460 502827 - serine_endoprotease_DegQ degQ QAA88295 502981 503379 - DUF1043_family_protein EPB33_02425 QAA88296 503573 504700 + cell_division_protein_ZapE zapE QAA88297 504919 505347 + 50S_ribosomal_protein_L13 EPB33_02435 QAA88298 505363 505755 + 30S_ribosomal_protein_S9 EPB33_02440 QAA88299 506150 506788 + stringent_starvation_protein_A EPB33_02445 QAA88300 506794 507291 + ClpXP_protease_specificity-enhancing_factor sspB QAA88301 507334 508701 - C4-dicarboxylate_transporter_DcuC dcuC QAA88302 509081 509872 + transcriptional_regulator_NanR EPB33_02460 QAA88303 509994 510887 + N-acetylneuraminate_lyase nanA QAA88304 510996 512486 + sialic_acid_transporter_NanT EPB33_02470 QAA88305 512534 513223 + N-acetylmannosamine-6-phosphate_2-epimerase EPB33_02475 QAA88306 513220 514095 + N-acetylmannosamine_kinase EPB33_02480 QAA88307 514092 514556 + YhcH/YjgK/YiaL_family_protein EPB33_02485 QAA88308 514616 515743 - DUF1016_domain-containing_protein EPB33_02490 QAA88309 515928 516644 - DUF1120_domain-containing_protein EPB33_02495 EPB33_02500 516641 516842 - hypothetical_protein no_locus_tag QAA88310 516852 517868 + IS5-like_element_IS5_family_transposase EPB33_02505 EPB33_02510 518017 518385 - hypothetical_protein no_locus_tag QAA88311 518382 520763 - fimbrial_biogenesis_outer_membrane_usher protein EPB33_02515 QAA88312 520784 521458 - fimbrial_chaperone_protein EPB33_02520 QAA88313 521630 522394 - DUF1120_domain-containing_protein EPB33_02525 QAA88314 522954 524372 - glutamate_synthase EPB33_02530 QAA88315 524385 528845 - glutamate_synthase_large_subunit gltB QAA91849 529520 530449 + TIGR01212_family_radical_SAM_protein EPB33_02540 QAA88316 530545 532881 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QAA88317 533111 533764 + isoprenoid_biosynthesis_glyoxalase_ElbB EPB33_02550 QAA88318 533761 534489 + monofunctional_biosynthetic_peptidoglycan transglycosylase EPB33_02555 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 QAA88306 97 507 100.0 1e-178 PJR32597.1 QAA88305 99 456 100.0 1e-160 PJR32599.1 QAA88303 100 611 100.0 0.0 PJR32600.1 QAA88302 99 536 100.0 0.0 >> 376. CP030240_0 Source: Escherichia coli strain ER1709 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2110 Table of genes, locations, strands and annotations of subject cluster: AYR80921 911033 911686 - glutamine_amidotransferase DQ225_04695 AYR80922 911916 914252 - hybrid_sensor_histidine_kinase/response regulator DQ225_04700 AYR84244 914348 915277 - TIGR01212_family_radical_SAM_protein DQ225_04705 AYR80923 915669 915905 - hypothetical_protein DQ225_04710 DQ225_04715 915803 916029 - hypothetical_protein no_locus_tag AYR80924 915952 920412 + glutamate_synthase_large_subunit DQ225_04720 AYR80925 920425 921843 + glutamate_synthase DQ225_04725 AYR80926 921998 922282 + hypothetical_protein DQ225_04730 AYR80927 922403 923167 + glutamate_synthase_operon_protein_GltF DQ225_04735 AYR80928 923339 924013 + fimbrial_chaperone_protein DQ225_04740 AYR80929 924034 926415 + fimbrial_protein DQ225_04745 DQ225_04750 926412 926780 + hypothetical_protein no_locus_tag AYR80930 926929 927945 - IS5-like_element_IS5_family_transposase DQ225_04755 AYR80931 927908 928156 + hypothetical_protein DQ225_04760 AYR80932 928153 928869 + DUF1120_domain-containing_protein DQ225_04765 AYR80933 929054 930181 + DUF1016_domain-containing_protein DQ225_04770 AYR80934 930241 930705 - YhcH/YjgK/YiaL_family_protein DQ225_04775 AYR80935 930702 931577 - N-acetylmannosamine_kinase DQ225_04780 AYR80936 931574 932263 - N-acetylmannosamine-6-phosphate_2-epimerase DQ225_04785 AYR80937 932311 933801 - MFS_transporter DQ225_04790 AYR80938 933910 934803 - N-acetylneuraminate_lyase nanA AYR80939 934925 935716 - transcriptional_regulator_NanR nanR DQ225_04805 935986 936096 - transposase no_locus_tag DQ225_04810 936096 937462 + C4-dicarboxylate_transporter_DcuC no_locus_tag AYR80940 937505 938002 - stringent_starvation_protein_B DQ225_04815 AYR80941 938008 938646 - stringent_starvation_protein_A DQ225_04820 DQ225_04825 938588 938796 + hypothetical_protein no_locus_tag AYR80942 939040 939432 - 30S_ribosomal_protein_S9 DQ225_04830 AYR80943 939448 939876 - 50S_ribosomal_protein_L13 DQ225_04835 AYR80944 940095 941222 - cell_division_protein_ZapE DQ225_04840 AYR80945 941416 941814 + DUF1043_family_protein DQ225_04845 AYR80946 941968 943335 + periplasmic_pH-dependent_serine_endoprotease DegQ DQ225_04850 AYR80947 943425 944492 + outer_membrane-stress_sensor_serine endopeptidase DegS DQ225_04855 AYR80948 944555 945493 - malate_dehydrogenase DQ225_04860 AYR80949 945928 946398 + arginine_repressor DQ225_04865 AYR80950 946763 947026 + DUF1471_domain-containing_protein DQ225_04870 AYR80951 947082 947354 - hypothetical_protein DQ225_04875 AYR80952 947446 949413 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DQ225_04880 AYR80953 949419 950351 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DQ225_04885 AYR80954 950359 950562 - protein_AaeX DQ225_04890 AYR80955 950745 951674 + HTH-type_transcriptional_activator_AaeR DQ225_04895 AYR80956 951808 953253 - metalloprotease_TldD DQ225_04900 AYR80957 953683 957483 - AsmA2_domain-containing_protein DQ225_04905 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AYR80935 97 507 100.0 1e-178 PJR32597.1 AYR80936 99 456 100.0 1e-160 PJR32599.1 AYR80938 100 611 100.0 0.0 PJR32600.1 AYR80939 99 536 100.0 0.0 >> 377. CP028703_0 Source: Escherichia coli strain ME8067 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2110 Table of genes, locations, strands and annotations of subject cluster: AVZ55642 4211346 4211999 - isoprenoid_biosynthesis_protein_ElbB DBB47_21830 AVZ55643 4212229 4214565 - hybrid_sensor_histidine_kinase/response regulator DBB47_21835 AVZ56148 4214661 4215590 - TIGR01212_family_radical_SAM_protein DBB47_21840 AVZ55644 4215982 4216218 - hypothetical_protein DBB47_21845 DBB47_21850 4216116 4216342 - hypothetical_protein no_locus_tag AVZ55645 4216265 4220725 + glutamate_synthase_large_subunit DBB47_21855 AVZ55646 4220738 4222156 + glutamate_synthase DBB47_21860 AVZ55647 4222311 4222595 + hypothetical_protein DBB47_21865 AVZ55648 4222716 4223480 + glutamate_synthase_operon_protein_GltF DBB47_21870 AVZ55649 4223652 4224326 + fimbrial_chaperone_protein DBB47_21875 AVZ55650 4224347 4226728 + fimbrial_protein DBB47_21880 DBB47_21885 4226725 4227093 + hypothetical_protein no_locus_tag AVZ55651 4227242 4228258 - IS5-like_element_IS5_family_transposase DBB47_21890 AVZ55652 4228221 4228469 + hypothetical_protein DBB47_21895 AVZ55653 4228466 4229182 + DUF1120_domain-containing_protein DBB47_21900 AVZ55654 4229367 4230494 + DUF1016_domain-containing_protein DBB47_21905 AVZ55655 4230554 4231018 - YhcH/YjgK/YiaL_family_protein DBB47_21910 AVZ55656 4231015 4231890 - N-acetylmannosamine_kinase DBB47_21915 AVZ55657 4231887 4232576 - N-acetylmannosamine-6-phosphate_2-epimerase DBB47_21920 AVZ55658 4232624 4234114 - MFS_transporter DBB47_21925 AVZ55659 4234223 4235116 - N-acetylneuraminate_lyase nanA AVZ55660 4235238 4236029 - transcriptional_regulator_NanR nanR DBB47_21940 4236299 4236409 - transposase no_locus_tag AVZ55661 4236409 4237776 + C4-dicarboxylate_transporter DBB47_21945 AVZ55662 4237819 4238316 - stringent_starvation_protein_B DBB47_21950 AVZ55663 4238322 4238960 - stringent_starvation_protein_A DBB47_21955 AVZ55664 4238902 4239111 + hypothetical_protein DBB47_21960 AVZ55665 4239355 4239747 - 30S_ribosomal_protein_S9 DBB47_21965 AVZ55666 4239763 4240191 - 50S_ribosomal_protein_L13 DBB47_21970 AVZ55667 4240410 4241537 - cell_division_protein_ZapE DBB47_21975 AVZ55668 4241731 4242129 + DUF1043_domain-containing_protein DBB47_21980 AVZ55669 4242283 4243650 + periplasmic_pH-dependent_serine_endoprotease DegQ DBB47_21985 AVZ55670 4243740 4244807 + outer_membrane-stress_sensor_serine endopeptidase DegS DBB47_21990 AVZ55671 4244870 4245808 - malate_dehydrogenase DBB47_21995 AVZ55672 4246243 4246713 + arginine_repressor DBB47_22000 AVZ55673 4247078 4247341 + DUF1471_domain-containing_protein DBB47_22005 AVZ55674 4247397 4247669 - hypothetical_protein DBB47_22010 AVZ55675 4247761 4249728 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DBB47_22015 AVZ55676 4249734 4250666 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DBB47_22020 AVZ55677 4250674 4250877 - protein_AaeX DBB47_22025 AVZ55678 4251060 4251989 + HTH-type_transcriptional_activator_AaeR DBB47_22030 AVZ55679 4252123 4253568 - metalloprotease_TldD DBB47_22035 AVZ55680 4253998 4257798 - AsmA2_domain-containing_protein DBB47_22040 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AVZ55656 97 507 100.0 1e-178 PJR32597.1 AVZ55657 99 456 100.0 1e-160 PJR32599.1 AVZ55659 100 611 100.0 0.0 PJR32600.1 AVZ55660 99 536 100.0 0.0 >> 378. CP023749_0 Source: Escherichia coli strain RTdelA_B_UU3 chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2110 Table of genes, locations, strands and annotations of subject cluster: AXA10545 3350944 3351597 - glutamine_amidotransferase CQ840_17345 AXA10546 3351827 3354163 - aerobic_respiration_two-component_sensor histidine kinase ArcB CQ840_17350 AXA11833 3354259 3355188 - TIGR01212_family_radical_SAM_protein CQ840_17355 AXA10547 3355580 3355816 - hypothetical_protein CQ840_17360 CQ840_17365 3355714 3355940 - hypothetical_protein no_locus_tag AXA10548 3355863 3360323 + glutamate_synthase_large_subunit CQ840_17370 AXA10549 3360336 3361754 + glutamate_synthase CQ840_17375 AXA10550 3361909 3362193 + hypothetical_protein CQ840_17380 AXA10551 3362314 3363078 + glutamate_synthase_operon_protein_GltF CQ840_17385 AXA10552 3363250 3363924 + fimbrial_chaperone_protein CQ840_17390 AXA10553 3363945 3366326 + fimbrial_protein CQ840_17395 AXA10554 3366323 3366802 + hypothetical_protein CQ840_17400 AXA10555 3366840 3367856 - IS5/IS1182_family_transposase CQ840_17405 CQ840_17410 3367857 3368067 + hypothetical_protein no_locus_tag AXA10556 3368064 3368780 + hypothetical_protein CQ840_17415 AXA10557 3368965 3370092 + hypothetical_protein CQ840_17420 AXA10558 3370152 3370616 - YhcH/YjgK/YiaL_family_protein CQ840_17425 AXA10559 3370613 3371488 - N-acetylmannosamine_kinase CQ840_17430 AXA10560 3371485 3372174 - N-acetylmannosamine-6-phosphate_2-epimerase CQ840_17435 AXA10561 3372222 3373712 - MFS_transporter CQ840_17440 AXA10562 3373821 3374714 - N-acetylneuraminate_lyase nanA AXA10563 3374836 3375627 - transcriptional_regulator_NanR CQ840_17450 CQ840_17455 3375897 3376007 - transposase no_locus_tag AXA10564 3376007 3377374 + C4-dicarboxylate_transporter CQ840_17460 AXA10565 3377417 3377914 - stringent_starvation_protein_B CQ840_17465 AXA10566 3377920 3378558 - stringent_starvation_protein_A CQ840_17470 AXA10567 3378500 3378709 + hypothetical_protein CQ840_17475 AXA10568 3378953 3379345 - 30S_ribosomal_protein_S9 CQ840_17480 AXA10569 3379361 3379789 - 50S_ribosomal_protein_L13 CQ840_17485 AXA10570 3380008 3381135 - cell_division_protein_ZapE CQ840_17490 AXA10571 3381329 3381727 + hypothetical_protein CQ840_17495 AXA10572 3381881 3383248 + periplasmic_pH-dependent_serine_endoprotease DegQ CQ840_17500 AXA10573 3383338 3384405 + outer_membrane-stress_sensor_serine endopeptidase DegS CQ840_17505 AXA10574 3384468 3385406 - malate_dehydrogenase CQ840_17510 AXA10575 3385841 3386311 + arginine_repressor CQ840_17515 AXA10576 3386676 3386939 + DUF1471_domain-containing_protein CQ840_17520 AXA10577 3386995 3387267 - hypothetical_protein CQ840_17525 AXA10578 3387359 3389326 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CQ840_17530 AXA10579 3389332 3390264 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CQ840_17535 AXA10580 3390272 3390475 - protein_AaeX CQ840_17540 AXA10581 3390658 3391587 + HTH-type_transcriptional_activator_AaeR CQ840_17545 AXA10582 3391721 3393166 - metalloprotease_TldD CQ840_17550 AXA10583 3393596 3397396 - DUF3971_domain-containing_protein CQ840_17555 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AXA10559 97 507 100.0 1e-178 PJR32597.1 AXA10560 99 456 100.0 1e-160 PJR32599.1 AXA10562 100 611 100.0 0.0 PJR32600.1 AXA10563 99 536 100.0 0.0 >> 379. CP013483_0 Source: Escherichia coli strain Y5, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2110 Table of genes, locations, strands and annotations of subject cluster: APA24712 924008 925453 + metalloprotease_TldD tldD APA24713 925587 926516 - transcriptional_regulator ATO45_04565 APA28254 926699 926902 + transporter ATO45_04570 APA24714 926910 927842 + p-hydroxybenzoic_acid_efflux_subunit_AaeA ATO45_04575 APA24715 927848 929815 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB ATO45_04580 APA24716 929907 930179 + hypothetical_protein ATO45_04585 APA24717 930235 930498 - hypothetical_protein ATO45_04590 APA24718 930863 931333 - arginine_repressor ATO45_04595 APA24719 931768 932706 + malate_dehydrogenase ATO45_04600 APA24720 932769 933836 - serine_endoprotease ATO45_04605 APA24721 933926 935293 - serine_endoprotease_DegQ ATO45_04610 APA28255 935447 935845 - hypothetical_protein ATO45_04615 APA24722 936039 937166 + hypothetical_protein ATO45_04620 APA24723 937385 937813 + 50S_ribosomal_protein_L13 ATO45_04625 APA24724 937829 938221 + 30S_ribosomal_protein_S9 ATO45_04630 APA24725 938616 939254 + stringent_starvation_protein_A sspA APA24726 939260 939757 + stringent_starvation_protein_B ATO45_04640 APA24727 939800 941167 - C4-dicarboxylate_transporter ATO45_04645 APA24728 941547 942338 + transcriptional_regulator_NanR ATO45_04650 APA24729 942460 943353 + N-acetylneuraminate_lyase ATO45_04655 APA24730 945000 945689 + N-acetylmannosamine-6-phosphate_2-epimerase ATO45_04665 APA24731 945686 946561 + N-acetylmannosamine_kinase ATO45_04670 APA24732 946558 947022 + hypothetical_protein ATO45_04675 ATO45_04680 947082 948068 - hypothetical_protein no_locus_tag APA24733 948030 948356 + transposase ATO45_04685 APA24734 948356 949243 + transposase ATO45_04690 APA24735 949283 949522 - hypothetical_protein ATO45_04695 APA24736 949707 950423 - hypothetical_protein ATO45_04700 APA24737 950420 950965 - hypothetical_protein ATO45_04705 APA24738 950962 953343 - fimbrial_protein ATO45_04710 APA24739 953364 954038 - fimbrial_chaperone_protein ATO45_04715 APA24740 954210 954974 - glutamate_synthase_operon_protein_GltF ATO45_04720 APA24741 955534 956952 - glutamate_synthase ATO45_04725 APA28256 956965 961425 - glutamate_synthase_subunit_alpha gltB APA28257 962100 963029 + radical_SAM_protein ATO45_04735 APA24742 963125 965461 + hybrid_sensor_histidine_kinase/response regulator ATO45_04740 APA24743 965691 966344 + isoprenoid_biosynthesis_protein ATO45_04745 APA24744 966341 967069 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 APA24731 97 507 100.0 1e-178 PJR32597.1 APA24730 99 456 100.0 1e-160 PJR32599.1 APA24729 100 611 100.0 0.0 PJR32600.1 APA24728 99 536 100.0 0.0 >> 380. CP007594_0 Source: Escherichia coli strain SEC470, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 2110 Table of genes, locations, strands and annotations of subject cluster: AKF22396 3736378 3736935 + lipopolysaccharide_transporter DP32_18860 AKF22397 3736942 3737667 + sugar_ABC_transporter_ATP-binding_protein DP32_18865 AKF22398 3737715 3739148 + RNA_polymerase_factor_sigma-54 DP32_18870 AKF22399 3739171 3739458 + ribosome_hibernation_promoting_factor_HPF DP32_18875 AKF22400 3739576 3740067 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) DP32_18880 AKF22401 3740113 3740967 + glmZ(sRNA)-inactivating_NTPase DP32_18885 AKF22402 3740964 3741236 + phosphohistidinoprotein-hexose phosphotransferase DP32_18890 AKF22403 3741450 3742082 + hypothetical_protein DP32_18895 AKF22404 3742079 3742807 - peptidoglycan_transglycosylase mtgA AKF22405 3742804 3743457 - isoprenoid_biosynthesis_protein DP32_18905 AKF22406 3743687 3746023 - aerobic_respiration_control_sensor_protein_ArcB DP32_18910 AKF23869 3746119 3747048 - hypothetical_protein DP32_18915 AKF23870 3747723 3752183 + glutamate_synthase gltB AKF22407 3752196 3753614 + glutamate_synthase DP32_18925 AKF22408 3754168 3754671 + transposase DP32_18930 AKF22409 3755490 3755954 - hypothetical_protein DP32_18940 AKF22410 3755951 3756826 - N-acetylmannosamine_kinase DP32_18945 AKF22411 3756823 3757512 - N-acetylmannosamine-6-phosphate_2-epimerase DP32_18950 AKF22412 3757560 3759050 - sialic_acid_transporter DP32_18955 AKF22413 3759160 3760053 - N-acetylneuraminate_lyase DP32_18960 AKF22414 3760175 3760966 - transcriptional_regulator_NanR DP32_18965 AKF22415 3761346 3762713 + C4-dicarboxylate_transporter DP32_18970 AKF22416 3762755 3763252 - Clp_protease_ClpP DP32_18975 AKF22417 3763258 3763896 - stringent_starvation_protein_A sspA AKF22418 3764291 3764683 - 30S_ribosomal_protein_S9 DP32_18985 AKF22419 3764699 3765127 - 50S_ribosomal_protein_L13 DP32_18990 AKF22420 3765346 3766473 - hypothetical_protein DP32_18995 AKF23871 3766667 3767065 + hypothetical_protein DP32_19000 AKF22421 3767219 3768586 + serine_endoprotease_DegQ DP32_19005 AKF22422 3768676 3769743 + serine_endoprotease DP32_19010 AKF22423 3769806 3770744 - malate_dehydrogenase DP32_19015 AKF22424 3771179 3771649 + arginine_repressor DP32_19020 AKF22425 3772014 3772277 + membrane_protein DP32_19025 AKF22426 3772333 3772605 - hypothetical_protein DP32_19030 AKF22427 3772697 3774664 - p-hydroxybenzoic_acid_efflux_subunit_AaeB DP32_19035 AKF22428 3774670 3775602 - p-hydroxybenzoic_acid_efflux_subunit_AaeA DP32_19040 AKF23872 3775610 3775813 - transporter DP32_19045 AKF22429 3775996 3776925 + transcriptional_regulator DP32_19050 AKF22430 3777059 3778504 - protease_TldD tldD AKF22431 3778934 3782734 - hypothetical_protein DP32_19060 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 AKF22410 97 507 100.0 1e-178 PJR32597.1 AKF22411 99 456 100.0 1e-160 PJR32599.1 AKF22413 100 611 100.0 0.0 PJR32600.1 AKF22414 99 536 100.0 0.0 >> 381. CP043750_0 Source: Escherichia coli strain CVM N62675 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1969 Table of genes, locations, strands and annotations of subject cluster: QEP78271 509740 511185 + metalloprotease_TldD tldD QEP78272 511319 512248 - HTH-type_transcriptional_activator_AaeR aaeR QEP78273 512431 512634 + DUF1656_domain-containing_protein F1L19_02515 QEP78274 512642 513574 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QEP78275 513580 515547 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QEP78276 515639 515911 + hypothetical_protein F1L19_02530 QEP78277 515967 516230 - peroxide/acid_stress_response_protein_YhcN yhcN QEP78278 516595 517065 - transcriptional_regulator_ArgR argR QEP78279 517500 518438 + malate_dehydrogenase mdh QEP78280 518501 519568 - serine_endoprotease_DegS F1L19_02550 QEP78281 519658 521025 - serine_endoprotease_DegQ degQ QEP78282 521179 521577 - DUF1043_family_protein F1L19_02560 QEP78283 521771 522898 + cell_division_protein_ZapE F1L19_02565 QEP78284 523117 523545 + 50S_ribosomal_protein_L13 rplM QEP78285 523561 523953 + 30S_ribosomal_protein_S9 rpsI QEP78286 524348 524986 + stringent_starvation_protein_A sspA QEP78287 524992 525489 + ClpXP_protease_specificity-enhancing_factor sspB QEP78288 525532 526899 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QEP78289 527279 528070 + transcriptional_regulator_NanR nanR QEP78290 528192 529085 + N-acetylneuraminate_lyase nanA QEP78291 529194 530684 + sialic_acid_transporter_NanT nanT QEP78292 530732 531421 + N-acetylmannosamine-6-phosphate_2-epimerase F1L19_02610 QEP78293 531418 532293 + N-acetylmannosamine_kinase F1L19_02615 QEP78294 532290 532754 + DUF386_domain-containing_protein F1L19_02620 QEP78295 532830 533135 - transposase F1L19_02625 QEP78296 533152 533631 - DUF1016_domain-containing_protein F1L19_02630 QEP78297 533815 535233 - NAD(P)-binding_protein F1L19_02635 QEP81998 535246 539706 - glutamate_synthase_large_subunit gltB QEP78298 540381 541310 + TIGR01212_family_radical_SAM_protein F1L19_02645 QEP78299 541406 543742 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QEP78300 543972 544625 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QEP78301 544622 545350 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QEP78302 545347 545979 - PhoP_regulatory_network_protein_YrbL yrbL QEP78303 546193 546465 - PTS_phosphocarrier_protein_NPr npr QEP78304 546462 547316 - RNase_adapter_RapZ rapZ QEP78305 547362 547853 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QEP78306 547971 548258 - ribosome_hibernation_promoting_factor F1L19_02685 QEP78307 548281 549714 - RNA_polymerase_factor_sigma-54 rpoN QEP78308 549762 550487 - LPS_export_ABC_transporter_ATP-binding_protein lptB QEP78309 550494 551051 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QEP78310 551020 551595 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QEP78311 551592 552158 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QEP78312 552179 553165 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QEP78294 98 314 100.0 3e-107 PJR32596.1 QEP78293 97 508 100.0 5e-179 PJR32599.1 QEP78290 100 611 100.0 0.0 PJR32600.1 QEP78289 99 536 100.0 0.0 >> 382. CP023377_0 Source: Escherichia coli strain 127 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1969 Table of genes, locations, strands and annotations of subject cluster: ATC01148 545521 546966 + metalloprotease_TldD CNQ50_02850 ATC01149 547100 548029 - HTH-type_transcriptional_activator_AaeR CNQ50_02855 ATC01150 548212 548415 + protein_AaeX CNQ50_02860 ATC01151 548423 549355 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CNQ50_02865 ATC01152 549361 551328 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CNQ50_02870 ATC01153 551420 551692 + hypothetical_protein CNQ50_02875 ATC04938 551748 552011 - hypothetical_protein CNQ50_02880 ATC01154 552376 552846 - arginine_repressor CNQ50_02885 ATC01155 553281 554219 + malate_dehydrogenase CNQ50_02890 ATC01156 554282 555349 - outer_membrane-stress_sensor_serine endopeptidase DegS CNQ50_02895 ATC01157 555439 556806 - periplasmic_pH-dependent_serine_endoprotease DegQ CNQ50_02900 ATC01158 556960 557358 - hypothetical_protein CNQ50_02905 ATC01159 557552 558679 + cell_division_protein_ZapE CNQ50_02910 ATC01160 558898 559326 + 50S_ribosomal_protein_L13 CNQ50_02915 ATC01161 559342 559734 + 30S_ribosomal_protein_S9 CNQ50_02920 ATC04939 559978 560187 - hypothetical_protein CNQ50_02925 ATC01162 560129 560767 + stringent_starvation_protein_A CNQ50_02930 ATC01163 560773 561270 + stringent_starvation_protein_B CNQ50_02935 ATC01164 561313 562680 - C4-dicarboxylate_transporter CNQ50_02940 CNQ50_02945 562680 562790 + transposase no_locus_tag ATC01165 563060 563851 + transcriptional_regulator_NanR CNQ50_02950 ATC01166 563973 564866 + N-acetylneuraminate_lyase nanA ATC01167 564975 566465 + MFS_transporter CNQ50_02960 ATC01168 566513 567202 + N-acetylmannosamine-6-phosphate_2-epimerase CNQ50_02965 ATC01169 567199 568074 + N-acetylmannosamine_kinase CNQ50_02970 ATC01170 568071 568535 + YhcH/YjgK/YiaL_family_protein CNQ50_02975 ATC01171 568611 568916 - transposase CNQ50_02980 ATC01172 568933 569412 - DUF1016_domain-containing_protein CNQ50_02985 ATC01173 569596 571014 - glutamate_synthase_small_subunit CNQ50_02990 ATC01174 571027 575487 - glutamate_synthase_large_subunit CNQ50_02995 CNQ50_03000 575410 575636 + hypothetical_protein no_locus_tag ATC01175 575534 575770 + hypothetical_protein CNQ50_03005 ATC04940 576162 577091 + TIGR01212_family_radical_SAM_protein CNQ50_03010 ATC01176 577187 579523 + hybrid_sensor_histidine_kinase/response regulator CNQ50_03015 ATC01177 579753 580406 + glutamine_amidotransferase CNQ50_03020 ATC01178 580403 581131 + monofunctional_biosynthetic_peptidoglycan transglycosylase CNQ50_03025 ATC01179 581128 581760 - hypothetical_protein CNQ50_03030 ATC01180 581974 582246 - phosphocarrier_protein_NPr CNQ50_03035 ATC01181 582243 583097 - RNase_adaptor_protein_RapZ CNQ50_03040 ATC01182 583143 583634 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN CNQ50_03045 ATC01183 583752 584039 - ribosome_hibernation_promoting_factor CNQ50_03050 ATC01184 584062 585495 - RNA_polymerase_sigma-54_factor CNQ50_03055 ATC01185 585543 586268 - ABC_transporter_ATP-binding_protein lptB ATC01186 586275 586832 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA CNQ50_03065 ATC01187 586801 587376 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC ATC01188 587373 587939 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC CNQ50_03075 ATC01189 587960 588946 - arabinose_5-phosphate_isomerase_KdsD CNQ50_03080 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 ATC01170 98 314 100.0 3e-107 PJR32596.1 ATC01169 97 508 100.0 5e-179 PJR32599.1 ATC01166 100 611 100.0 0.0 PJR32600.1 ATC01165 99 536 100.0 0.0 >> 383. CP010163_0 Source: Escherichia coli strain H2, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1968 Table of genes, locations, strands and annotations of subject cluster: APK51947 774298 775743 + protease_TldD tldD APK51948 775877 776806 - transcriptional_regulator RG45_03845 APK55348 776989 777192 + transporter RG45_03850 APK51949 777200 778132 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG45_03855 APK51950 778138 780105 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG45_03860 APK51951 780197 780469 + hypothetical_protein RG45_03865 APK51952 780525 780788 - membrane_protein RG45_03870 APK51953 781153 781623 - arginine_repressor RG45_03875 APK51954 782058 782996 + malate_dehydrogenase RG45_03880 APK51955 783059 784126 - serine_endoprotease RG45_03885 APK51956 784216 785583 - serine_endoprotease_DegQ RG45_03890 APK51957 785737 786135 - hypothetical_protein RG45_03895 APK51958 786329 787456 + hypothetical_protein RG45_03900 APK51959 787675 788103 + 50S_ribosomal_protein_L13 RG45_03905 APK51960 788119 788511 + 30S_ribosomal_protein_S9 RG45_03910 APK51961 788906 789544 + stringent_starvation_protein_A sspA APK51962 789550 790047 + Clp_protease_ClpP RG45_03920 APK51963 790090 791457 - C4-dicarboxylate_transporter RG45_03925 APK51964 791837 792628 + transcriptional_regulator_NanR RG45_03930 APK51965 792750 793643 + N-acetylneuraminate_lyase RG45_03935 APK51966 793752 795242 + sialic_acid_transporter RG45_03940 APK51967 795290 795979 + N-acetylmannosamine-6-phosphate_2-epimerase RG45_03945 APK51968 795976 796851 + N-acetylmannosamine_kinase RG45_03950 APK51969 796848 797312 + hypothetical_protein RG45_03955 APK51970 797388 797693 - transposase RG45_03960 APK51971 798373 799791 - glutamate_synthase RG45_03970 APK55349 799804 804264 - glutamate_synthase gltB APK55350 804939 805868 + hypothetical_protein RG45_03980 APK51972 805964 808300 + aerobic_respiration_control_sensor_protein_ArcB RG45_03985 APK51973 808530 809183 + isoprenoid_biosynthesis_protein RG45_03990 APK51974 809180 809908 + peptidoglycan_transglycosylase mtgA APK51975 809905 810537 - hypothetical_protein RG45_04000 APK51976 810751 811023 - phosphohistidinoprotein-hexose phosphotransferase RG45_04005 APK51977 811020 811874 - glmZ(sRNA)-inactivating_NTPase RG45_04010 APK51978 811920 812411 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG45_04015 APK51979 812529 812816 - ribosome_hibernation_promoting_factor_HPF RG45_04020 APK51980 812839 814272 - RNA_polymerase_factor_sigma-54 RG45_04025 APK51981 814320 815045 - sugar_ABC_transporter_ATP-binding_protein RG45_04030 APK51982 815052 815609 - lipopolysaccharide_transporter RG45_04035 APK51983 815578 816153 - lipopolysaccharide_transporter RG45_04040 APK51984 816150 816716 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG45_04045 APK51985 816737 817723 - D-arabinose_5-phosphate_isomerase RG45_04050 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 APK51969 98 313 100.0 1e-106 PJR32596.1 APK51968 97 508 100.0 5e-179 PJR32599.1 APK51965 100 611 100.0 0.0 PJR32600.1 APK51964 99 536 100.0 0.0 >> 384. CP026755_0 Source: Escherichia coli strain AR_0077 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1939 Table of genes, locations, strands and annotations of subject cluster: AVE95481 3393339 3393905 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC AM456_18185 AVE95482 3393902 3394477 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AVE95483 3394446 3395003 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA AM456_18195 AVE95484 3395010 3395735 + ABC_transporter_ATP-binding_protein lptB AVE95485 3395783 3397216 + RNA_polymerase_sigma-54_factor AM456_18205 AVE95486 3397239 3397526 + ribosome_hibernation_promoting_factor AM456_18210 AVE95487 3397644 3398135 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN AM456_18215 AVE95488 3398181 3399035 + RNase_adaptor_protein_RapZ AM456_18220 AVE95489 3399032 3399304 + phosphocarrier_protein_NPr AM456_18225 AVE95490 3399517 3400149 + protein_YrbL yrbL AVE95491 3400146 3400874 - monofunctional_biosynthetic_peptidoglycan transglycosylase AM456_18235 AVE95492 3400871 3401524 - isoprenoid_biosynthesis_protein_ElbB AM456_18240 AVE95493 3401754 3404090 - hybrid_sensor_histidine_kinase/response regulator AM456_18245 AVE97061 3404186 3405115 - TIGR01212_family_radical_SAM_protein AM456_18250 AVE95494 3405507 3405743 - hypothetical_protein AM456_18255 AM456_18260 3405641 3405867 - hypothetical_protein no_locus_tag AVE95495 3405790 3410250 + glutamate_synthase_large_subunit AM456_18265 AVE95496 3410263 3411681 + glutamate_synthase_small_subunit AM456_18270 AM456_18275 3411865 3412978 + DUF1016_domain-containing_protein no_locus_tag AVE95497 3413038 3413502 - YhcH/YjgK/YiaL_family_protein AM456_18280 AVE95498 3413499 3414374 - allose_kinase AM456_18285 AVE95499 3414371 3415060 - N-acetylmannosamine-6-phosphate_2-epimerase AM456_18290 AVE95500 3415108 3416598 - MFS_transporter AM456_18295 AVE95501 3416707 3417600 - N-acetylneuraminate_lyase nanA AVE95502 3417722 3418513 - transcriptional_regulator_NanR nanR AM456_18310 3418783 3418893 - transposase no_locus_tag AVE95503 3418893 3420260 + C4-dicarboxylate_transporter AM456_18315 AVE95504 3420304 3420801 - stringent_starvation_protein_B AM456_18320 AVE95505 3420807 3421445 - stringent_starvation_protein_A AM456_18325 AVE95506 3421387 3421596 + hypothetical_protein AM456_18330 AVE95507 3421839 3422231 - 30S_ribosomal_protein_S9 AM456_18335 AVE95508 3422247 3422675 - 50S_ribosomal_protein_L13 AM456_18340 AVE95509 3422894 3424021 - cell_division_protein_ZapE AM456_18345 AVE95510 3424215 3424613 + hypothetical_protein AM456_18350 AVE95511 3424767 3426134 + serine_endoprotease_DegQ AM456_18355 AVE95512 3426224 3427291 + outer_membrane-stress_sensor_serine endopeptidase DegS AM456_18360 AVE95513 3427354 3428292 - malate_dehydrogenase AM456_18365 AVE95514 3428727 3429197 + arginine_repressor AM456_18370 AVE95515 3429562 3429825 + DUF1471_domain-containing_protein AM456_18375 AVE95516 3429881 3430153 - hypothetical_protein AM456_18380 AVE95517 3430245 3432212 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB AM456_18385 AVE95518 3432218 3433150 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA AM456_18390 AVE95519 3433158 3433361 - protein_AaeX AM456_18395 AVE95520 3433544 3434473 + HTH-type_transcriptional_activator_AaeR AM456_18400 AVE95521 3434601 3436046 - metalloprotease_TldD AM456_18405 AVE95522 3436202 3440002 - AsmA2_domain-containing_protein AM456_18410 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AVE95497 98 311 100.0 5e-106 PJR32596.1 AVE95498 98 561 100.0 0.0 PJR32597.1 AVE95499 99 456 100.0 1e-160 PJR32599.1 AVE95501 100 611 100.0 0.0 >> 385. CP048337_0 Source: Escherichia coli strain 142 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1887 Table of genes, locations, strands and annotations of subject cluster: QHW52799 544089 545534 + metalloprotease_TldD tldD QHW52800 545662 546591 - HTH-type_transcriptional_activator_AaeR aaeR QHW52801 546774 546977 + AaeX_family_protein GZS12_02540 QHW52802 546985 547917 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHW52803 547923 549890 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHW52804 549982 550254 + hypothetical_protein GZS12_02555 QHW52805 550311 550574 - peroxide/acid_stress_response_protein_YhcN yhcN QHW52806 550939 551409 - transcriptional_regulator_ArgR argR QHW52807 551844 552782 + malate_dehydrogenase mdh QHW52808 552845 553912 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QHW52809 554002 555369 - serine_endoprotease_DegQ degQ QHW52810 555523 555921 - DUF1043_family_protein GZS12_02585 QHW52811 556115 557242 + cell_division_protein_ZapE GZS12_02590 QHW52812 557461 557889 + 50S_ribosomal_protein_L13 rplM QHW52813 557905 558297 + 30S_ribosomal_protein_S9 rpsI QHW52814 558691 559329 + stringent_starvation_protein_A sspA QHW52815 559335 559832 + ClpXP_protease_specificity-enhancing_factor sspB QHW52816 559876 561243 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHW52817 561623 562414 + transcriptional_regulator_NanR nanR QHW52818 562536 563429 + N-acetylneuraminate_lyase nanA QHW52819 563538 565028 + sialic_acid_transporter_NanT nanT QHW52820 565076 565765 + N-acetylmannosamine-6-phosphate_2-epimerase GZS12_02635 QHW52821 565762 566637 + N-acetylmannosamine_kinase GZS12_02640 QHW52822 566634 567098 + DUF386_domain-containing_protein GZS12_02645 QHW52823 567158 568270 - DUF1016_domain-containing_protein GZS12_02650 QHW52824 568454 569872 - FAD-dependent_oxidoreductase GZS12_02655 QHW56762 569885 574345 - glutamate_synthase_large_subunit gltB QHW52825 575019 575948 + TIGR01212_family_radical_SAM_protein GZS12_02665 QHW52826 576044 578380 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHW52827 578610 579263 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHW52828 579260 579988 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHW52829 579985 580617 - PhoP_regulatory_network_protein_YrbL yrbL QHW52830 580830 581102 - PTS_phosphocarrier_protein_NPr npr QHW52831 581099 581953 - RNase_adapter_RapZ rapZ QHW52832 581999 582490 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHW52833 582608 582895 - ribosome_hibernation_promoting_factor hpf QHW52834 582918 584351 - RNA_polymerase_factor_sigma-54 rpoN QHW52835 584399 585124 - LPS_export_ABC_transporter_ATP-binding_protein lptB QHW52836 585131 585688 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHW52837 585657 586232 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHW52838 586229 586795 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHW52839 586816 587802 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QHW52822 98 311 100.0 7e-106 PJR32596.1 QHW52821 97 509 100.0 1e-179 PJR32597.1 QHW52820 99 456 100.0 1e-160 PJR32599.1 QHW52818 100 611 100.0 0.0 >> 386. CP043736_0 Source: Escherichia coli strain CVM N17EC0616 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1887 Table of genes, locations, strands and annotations of subject cluster: QEQ76880 548400 549845 + metalloprotease_TldD tldD QEQ76881 549973 550902 - HTH-type_transcriptional_activator_AaeR aaeR QEQ76882 551085 551288 + DUF1656_domain-containing_protein D9G11_02645 QEQ76883 551296 552228 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QEQ76884 552234 554201 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QEQ76885 554293 554565 + hypothetical_protein D9G11_02660 QEQ76886 554622 554885 - peroxide/acid_stress_response_protein_YhcN yhcN QEQ76887 555250 555720 - transcriptional_regulator_ArgR argR QEQ76888 556155 557093 + malate_dehydrogenase mdh QEQ76889 557156 558223 - serine_endoprotease_DegS D9G11_02680 QEQ76890 558313 559680 - serine_endoprotease_DegQ degQ QEQ76891 559834 560232 - DUF1043_family_protein D9G11_02690 QEQ76892 560426 561553 + cell_division_protein_ZapE D9G11_02695 QEQ76893 561772 562200 + 50S_ribosomal_protein_L13 rplM QEQ76894 562216 562608 + 30S_ribosomal_protein_S9 rpsI QEQ76895 563002 563640 + stringent_starvation_protein_A sspA QEQ76896 563646 564143 + ClpXP_protease_specificity-enhancing_factor sspB QEQ76897 564187 565554 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QEQ76898 565934 566725 + transcriptional_regulator_NanR nanR QEQ76899 566847 567740 + N-acetylneuraminate_lyase nanA QEQ76900 567849 569339 + sialic_acid_transporter_NanT nanT QEQ76901 569387 570076 + N-acetylmannosamine-6-phosphate_2-epimerase D9G11_02740 QEQ76902 570073 570948 + N-acetylmannosamine_kinase D9G11_02745 QEQ76903 570945 571409 + DUF386_domain-containing_protein D9G11_02750 QEQ76904 571469 572581 - DUF1016_domain-containing_protein D9G11_02755 QEQ76905 572765 574183 - NAD(P)-binding_protein D9G11_02760 QEQ80902 574196 578656 - glutamate_synthase_large_subunit gltB QEQ76906 579331 580260 + TIGR01212_family_radical_SAM_protein D9G11_02770 QEQ76907 580356 582692 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QEQ76908 582922 583575 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QEQ76909 583572 584300 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QEQ76910 584297 584929 - PhoP_regulatory_network_protein_YrbL yrbL QEQ76911 585142 585414 - PTS_phosphocarrier_protein_NPr npr QEQ76912 585411 586265 - RNase_adapter_RapZ rapZ QEQ76913 586311 586802 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QEQ76914 586920 587207 - ribosome_hibernation_promoting_factor D9G11_02810 QEQ76915 587230 588663 - RNA_polymerase_factor_sigma-54 rpoN QEQ76916 588711 589436 - LPS_export_ABC_transporter_ATP-binding_protein lptB QEQ76917 589443 590000 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QEQ76918 589969 590544 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QEQ76919 590541 591107 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QEQ76920 591128 592114 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QEQ76903 98 311 100.0 7e-106 PJR32596.1 QEQ76902 97 509 100.0 1e-179 PJR32597.1 QEQ76901 99 456 100.0 1e-160 PJR32599.1 QEQ76899 100 611 100.0 0.0 >> 387. CP041300_0 Source: Escherichia coli O1:H42 strain CLSC36 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1887 Table of genes, locations, strands and annotations of subject cluster: QDJ69663 586922 588367 + metalloprotease_TldD tldD QDJ69664 588495 589424 - HTH-type_transcriptional_activator_AaeR aaeR QDJ69665 589607 589810 + DUF1656_domain-containing_protein FK541_03945 QDJ69666 589818 590750 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QDJ69667 590756 592723 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QDJ69668 592815 593087 + hypothetical_protein FK541_03960 QDJ69669 593144 593407 - peroxide/acid_stress_response_protein_YhcN yhcN QDJ69670 593772 594242 - transcriptional_regulator_ArgR argR QDJ69671 594677 595615 + malate_dehydrogenase mdh QDJ69672 595678 596745 - serine_endoprotease_DegS FK541_03980 QDJ69673 596835 598202 - serine_endoprotease_DegQ degQ QDJ69674 598356 598754 - DUF1043_family_protein FK541_03990 QDJ69675 598948 600075 + cell_division_protein_ZapE FK541_03995 QDJ69676 600294 600722 + 50S_ribosomal_protein_L13 rplM QDJ69677 600738 601130 + 30S_ribosomal_protein_S9 rpsI QDJ69678 601524 602162 + stringent_starvation_protein_A sspA QDJ69679 602168 602665 + ClpXP_protease_specificity-enhancing_factor sspB QDJ69680 602709 604076 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QDJ69681 604456 605247 + transcriptional_regulator_NanR nanR QDJ69682 605369 606262 + N-acetylneuraminate_lyase nanA QDJ69683 606371 607861 + sialic_acid_transporter_NanT nanT QDJ69684 607909 608598 + N-acetylmannosamine-6-phosphate_2-epimerase FK541_04040 QDJ69685 608595 609470 + ROK_family_protein FK541_04045 QDJ69686 609467 609931 + DUF386_domain-containing_protein FK541_04050 QDJ69687 609991 611103 - DUF1016_domain-containing_protein FK541_04055 QDJ69688 611287 612705 - glutamate_synthase_small_subunit FK541_04060 QDJ73580 612718 617178 - glutamate_synthase_large_subunit gltB QDJ69689 617852 618781 + TIGR01212_family_radical_SAM_protein FK541_04070 QDJ69690 618877 621213 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QDJ69691 621443 622096 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QDJ69692 622093 622821 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QDJ69693 622818 623450 - PhoP_regulatory_network_protein_YrbL yrbL QDJ69694 623663 623935 - PTS_phosphocarrier_protein_NPr npr QDJ69695 623932 624786 - RNase_adapter_RapZ rapZ QDJ69696 624832 625323 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QDJ69697 625441 625728 - ribosome_hibernation_promoting_factor FK541_04110 QDJ69698 625751 627184 - RNA_polymerase_factor_sigma-54 rpoN QDJ69699 627232 627957 - LPS_export_ABC_transporter_ATP-binding_protein lptB QDJ69700 627964 628521 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QDJ69701 628490 629065 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QDJ69702 629062 629628 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QDJ69703 629649 630635 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QDJ69686 98 311 100.0 7e-106 PJR32596.1 QDJ69685 97 509 100.0 1e-179 PJR32597.1 QDJ69684 99 456 100.0 1e-160 PJR32599.1 QDJ69682 100 611 100.0 0.0 >> 388. CP035318_0 Source: Escherichia coli strain Ec-2Lar chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1887 Table of genes, locations, strands and annotations of subject cluster: QBA52903 2636967 2637533 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QBA52904 2637530 2638105 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QBA52905 2638074 2638631 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QBA52906 2638638 2639363 + lipopolysaccharide_ABC_transporter_ATP-binding protein ETE41_12915 QBA52907 2639411 2640844 + RNA_polymerase_factor_sigma-54 ETE41_12920 QBA52908 2640867 2641154 + ribosome_hibernation_promoting_factor ETE41_12925 QBA52909 2641272 2641763 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QBA52910 2641809 2642663 + RNase_adapter_RapZ rapZ QBA52911 2642660 2642932 + PTS_phosphocarrier_protein_NPr ETE41_12940 QBA52912 2643145 2643777 + PhoP_regulatory_network_protein_YrbL yrbL QBA52913 2643774 2644502 - monofunctional_biosynthetic_peptidoglycan transglycosylase ETE41_12950 QBA52914 2644499 2645152 - isoprenoid_biosynthesis_protein_ElbB elbB QBA52915 2645382 2647718 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QBA52916 2647814 2648743 - TIGR01212_family_radical_SAM_protein ETE41_12965 QBA52917 2649417 2653877 + glutamate_synthase_large_subunit gltB QBA52918 2653890 2655308 + glutamate_synthase_small_subunit ETE41_12975 QBA52919 2655492 2656604 + DUF1016_domain-containing_protein ETE41_12980 QBA52920 2656664 2657128 - YhcH/YjgK/YiaL_family_protein ETE41_12985 QBA52921 2657125 2658000 - ROK_family_protein ETE41_12990 QBA52922 2657997 2658686 - N-acetylmannosamine-6-phosphate_2-epimerase ETE41_12995 QBA52923 2658734 2660224 - MFS_transporter ETE41_13000 QBA52924 2660333 2661226 - N-acetylneuraminate_lyase nanA QBA52925 2661348 2662139 - transcriptional_regulator_NanR ETE41_13010 QBA52926 2662519 2663886 + C4-dicarboxylate_transporter_DcuC dcuC QBA52927 2663930 2664427 - ClpXP_protease_specificity-enhancing_factor sspB QBA52928 2664433 2665071 - stringent_starvation_protein_A ETE41_13025 QBA52929 2665465 2665857 - 30S_ribosomal_protein_S9 ETE41_13030 QBA52930 2665873 2666301 - 50S_ribosomal_protein_L13 ETE41_13035 QBA52931 2666520 2667647 - cell_division_protein_ZapE zapE QBA52932 2667841 2668239 + DUF1043_family_protein ETE41_13045 QBA52933 2668393 2669760 + serine_endoprotease_DegQ degQ QBA52934 2669850 2670917 + serine_endoprotease_DegS degS QBA52935 2670980 2671918 - malate_dehydrogenase ETE41_13060 QBA52936 2672353 2672823 + transcriptional_regulator_ArgR argR QBA52937 2673188 2673451 + peroxide/acid_stress_response_protein_YhcN yhcN QBA52938 2673508 2673780 - hypothetical_protein ETE41_13075 QBA52939 2673872 2675839 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QBA52940 2675845 2676777 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QBA52941 2676785 2676988 - DUF1656_domain-containing_protein ETE41_13090 QBA52942 2677171 2678100 + HTH-type_transcriptional_activator_AaeR aaeR QBA52943 2678228 2679673 - metalloprotease_TldD tldD QBA52944 2679829 2683629 - AsmA2_domain-containing_protein ETE41_13105 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QBA52920 98 311 100.0 7e-106 PJR32596.1 QBA52921 97 509 100.0 1e-179 PJR32597.1 QBA52922 99 456 100.0 1e-160 PJR32599.1 QBA52924 100 611 100.0 0.0 >> 389. CP035317_0 Source: Escherichia coli strain Ec-20Lar chromosome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1887 Table of genes, locations, strands and annotations of subject cluster: QBA48308 2768978 2770423 + metalloprotease_TldD tldD QBA48309 2770551 2771480 - HTH-type_transcriptional_activator_AaeR aaeR QBA48310 2771663 2771866 + DUF1656_domain-containing_protein EQ191_13495 QBA48311 2771874 2772806 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QBA48312 2772812 2774779 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QBA48313 2774871 2775143 + hypothetical_protein EQ191_13510 QBA48314 2775200 2775463 - peroxide/acid_stress_response_protein_YhcN yhcN QBA48315 2775828 2776298 - transcriptional_regulator_ArgR argR QBA48316 2776733 2777671 + malate_dehydrogenase EQ191_13525 QBA48317 2777734 2778801 - serine_endoprotease_DegS degS QBA48318 2778891 2780258 - serine_endoprotease_DegQ degQ QBA48319 2780412 2780810 - DUF1043_family_protein EQ191_13540 QBA48320 2781004 2782131 + cell_division_protein_ZapE zapE QBA48321 2782350 2782778 + 50S_ribosomal_protein_L13 EQ191_13550 QBA48322 2782794 2783186 + 30S_ribosomal_protein_S9 EQ191_13555 QBA48323 2783580 2784218 + stringent_starvation_protein_A EQ191_13560 QBA48324 2784224 2784721 + ClpXP_protease_specificity-enhancing_factor sspB QBA48325 2784765 2786132 - C4-dicarboxylate_transporter_DcuC dcuC QBA48326 2786512 2787303 + transcriptional_regulator_NanR EQ191_13575 QBA48327 2787425 2788318 + N-acetylneuraminate_lyase nanA QBA48328 2788427 2789917 + MFS_transporter EQ191_13585 QBA48329 2789965 2790654 + N-acetylmannosamine-6-phosphate_2-epimerase EQ191_13590 QBA48330 2790651 2791526 + ROK_family_protein EQ191_13595 QBA48331 2791523 2791987 + YhcH/YjgK/YiaL_family_protein EQ191_13600 QBA48332 2792047 2793159 - DUF1016_domain-containing_protein EQ191_13605 QBA48333 2793343 2794761 - glutamate_synthase_small_subunit EQ191_13610 QBA48334 2794774 2799234 - glutamate_synthase_large_subunit gltB QBA48335 2799908 2800837 + TIGR01212_family_radical_SAM_protein EQ191_13620 QBA48336 2800933 2803269 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QBA48337 2803499 2804152 + isoprenoid_biosynthesis_protein_ElbB elbB QBA48338 2804149 2804877 + monofunctional_biosynthetic_peptidoglycan transglycosylase EQ191_13635 QBA48339 2804874 2805506 - PhoP_regulatory_network_protein_YrbL yrbL QBA48340 2805719 2805991 - PTS_phosphocarrier_protein_NPr EQ191_13645 QBA48341 2805988 2806842 - RNase_adapter_RapZ rapZ QBA48342 2806888 2807379 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QBA48343 2807497 2807784 - ribosome_hibernation_promoting_factor EQ191_13660 QBA48344 2807807 2809240 - RNA_polymerase_factor_sigma-54 EQ191_13665 QBA48345 2809288 2810013 - lipopolysaccharide_ABC_transporter_ATP-binding protein EQ191_13670 QBA48346 2810020 2810577 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QBA48347 2810546 2811121 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QBA48348 2811118 2811684 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QBA48349 2811705 2812691 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QBA48331 98 311 100.0 7e-106 PJR32596.1 QBA48330 97 509 100.0 1e-179 PJR32597.1 QBA48329 99 456 100.0 1e-160 PJR32599.1 QBA48327 100 611 100.0 0.0 >> 390. CP023366_0 Source: Escherichia coli strain 1428 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1887 Table of genes, locations, strands and annotations of subject cluster: ATB91339 575137 576582 + metalloprotease_TldD CNQ52_02890 ATB91340 576710 577639 - HTH-type_transcriptional_activator_AaeR CNQ52_02895 ATB91341 577822 578025 + protein_AaeX CNQ52_02900 ATB91342 578033 578965 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CNQ52_02905 ATB91343 578971 580938 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CNQ52_02910 ATB91344 581030 581302 + hypothetical_protein CNQ52_02915 ATB91345 581359 581622 - hypothetical_protein CNQ52_02920 ATB91346 581987 582457 - arginine_repressor CNQ52_02925 ATB91347 582892 583830 + malate_dehydrogenase CNQ52_02930 ATB91348 583893 584960 - outer_membrane-stress_sensor_serine endopeptidase DegS CNQ52_02935 ATB91349 585050 586417 - periplasmic_pH-dependent_serine_endoprotease DegQ CNQ52_02940 ATB91350 586571 586969 - hypothetical_protein CNQ52_02945 ATB91351 587163 588290 + cell_division_protein_ZapE CNQ52_02950 ATB91352 588509 588937 + 50S_ribosomal_protein_L13 CNQ52_02955 ATB91353 588953 589345 + 30S_ribosomal_protein_S9 CNQ52_02960 ATB95391 589588 589797 - hypothetical_protein CNQ52_02965 ATB91354 589739 590377 + stringent_starvation_protein_A CNQ52_02970 ATB91355 590383 590880 + stringent_starvation_protein_B CNQ52_02975 ATB91356 590924 592291 - C4-dicarboxylate_transporter CNQ52_02980 CNQ52_02985 592291 592401 + transposase no_locus_tag ATB91357 592671 593462 + transcriptional_regulator_NanR CNQ52_02990 ATB91358 593584 594477 + N-acetylneuraminate_lyase nanA ATB91359 594586 596076 + MFS_transporter CNQ52_03000 ATB91360 596124 596813 + N-acetylmannosamine-6-phosphate_2-epimerase CNQ52_03005 ATB91361 596810 597685 + N-acetylmannosamine_kinase CNQ52_03010 ATB91362 597682 598146 + YhcH/YjgK/YiaL_family_protein CNQ52_03015 ATB91363 598206 599318 - DUF1016_domain-containing_protein CNQ52_03020 ATB91364 599502 600920 - glutamate_synthase_small_subunit CNQ52_03025 ATB91365 600933 605393 - glutamate_synthase_large_subunit CNQ52_03030 CNQ52_03035 605316 605542 + hypothetical_protein no_locus_tag ATB91366 605476 605676 + hypothetical_protein CNQ52_03040 ATB95392 606067 606996 + TIGR01212_family_radical_SAM_protein CNQ52_03045 ATB91367 607092 609428 + hybrid_sensor_histidine_kinase/response regulator CNQ52_03050 ATB91368 609658 610311 + isoprenoid_biosynthesis_protein_ElbB CNQ52_03055 ATB91369 610308 611036 + monofunctional_biosynthetic_peptidoglycan transglycosylase CNQ52_03060 ATB91370 611033 611665 - hypothetical_protein CNQ52_03065 ATB91371 611878 612150 - phosphocarrier_protein_NPr CNQ52_03070 ATB91372 612147 613001 - RNase_adaptor_protein_RapZ CNQ52_03075 ATB91373 613047 613538 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN CNQ52_03080 ATB91374 613656 613943 - ribosome_hibernation_promoting_factor CNQ52_03085 ATB91375 613966 615399 - RNA_polymerase_sigma-54_factor CNQ52_03090 ATB91376 615447 616172 - ABC_transporter_ATP-binding_protein lptB ATB91377 616179 616736 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA CNQ52_03100 ATB91378 616705 617280 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC ATB91379 617277 617843 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC CNQ52_03110 ATB91380 617864 618850 - arabinose_5-phosphate_isomerase_KdsD CNQ52_03115 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 ATB91362 98 311 100.0 7e-106 PJR32596.1 ATB91361 97 509 100.0 1e-179 PJR32597.1 ATB91360 99 456 100.0 1e-160 PJR32599.1 ATB91358 100 611 100.0 0.0 >> 391. CP022164_0 Source: Escherichia coli strain M160133 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1887 Table of genes, locations, strands and annotations of subject cluster: ASI14820 553004 554449 + metalloprotease_TldD CE141_02835 ASI14821 554577 555506 - HTH-type_transcriptional_activator_AaeR CE141_02840 ASI14822 555689 555892 + protein_AaeX CE141_02845 ASI14823 555900 556832 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CE141_02850 ASI14824 556838 558805 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CE141_02855 ASI14825 558897 559169 + hypothetical_protein CE141_02860 ASI14826 559226 559489 - hypothetical_protein CE141_02865 ASI14827 559854 560324 - arginine_repressor CE141_02870 ASI14828 560759 561697 + malate_dehydrogenase CE141_02875 ASI14829 561760 562827 - outer_membrane-stress_sensor_serine endopeptidase DegS CE141_02880 ASI14830 562917 564284 - periplasmic_pH-dependent_serine_endoprotease DegQ CE141_02885 ASI14831 564438 564836 - hypothetical_protein CE141_02890 ASI14832 565030 566157 + cell_division_protein_ZapE CE141_02895 ASI14833 566376 566804 + 50S_ribosomal_protein_L13 CE141_02900 ASI14834 566820 567212 + 30S_ribosomal_protein_S9 CE141_02905 ASI18802 567455 567664 - hypothetical_protein CE141_02910 ASI14835 567606 568244 + stringent_starvation_protein_A CE141_02915 ASI14836 568250 568747 + stringent_starvation_protein_B CE141_02920 ASI14837 568791 570158 - C4-dicarboxylate_transporter CE141_02925 CE141_02930 570158 570268 + transposase no_locus_tag ASI14838 570538 571329 + transcriptional_regulator_NanR CE141_02935 ASI14839 571451 572344 + N-acetylneuraminate_lyase nanA ASI14840 572453 573943 + MFS_transporter CE141_02945 ASI14841 573991 574680 + N-acetylmannosamine-6-phosphate_2-epimerase CE141_02950 ASI14842 574677 575552 + N-acetylmannosamine_kinase CE141_02955 ASI14843 575549 576013 + YhcH/YjgK/YiaL_family_protein CE141_02960 ASI14844 576073 577185 - DUF1016_domain-containing_protein CE141_02965 ASI14845 577369 578787 - glutamate_synthase_small_subunit CE141_02970 ASI14846 578800 583260 - glutamate_synthase_large_subunit CE141_02975 CE141_02980 583183 583409 + hypothetical_protein no_locus_tag ASI14847 583307 583543 + hypothetical_protein CE141_02985 ASI18803 583935 584864 + TIGR01212_family_radical_SAM_protein CE141_02990 ASI14848 584960 587296 + hybrid_sensor_histidine_kinase/response regulator CE141_02995 ASI14849 587526 588179 + glutamine_amidotransferase CE141_03000 ASI14850 588176 588904 + monofunctional_biosynthetic_peptidoglycan transglycosylase CE141_03005 ASI14851 588901 589533 - hypothetical_protein CE141_03010 ASI14852 589746 590018 - phosphocarrier_protein_NPr CE141_03015 ASI14853 590015 590869 - RNase_adaptor_protein_RapZ CE141_03020 ASI14854 590915 591406 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN CE141_03025 ASI14855 591524 591811 - ribosome_hibernation_promoting_factor raiA ASI14856 591834 593267 - RNA_polymerase_sigma-54_factor CE141_03035 ASI14857 593315 594040 - ABC_transporter_ATP-binding_protein lptB ASI14858 594047 594604 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA CE141_03045 ASI14859 594573 595148 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC ASI14860 595145 595711 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC CE141_03055 ASI14861 595732 596718 - arabinose_5-phosphate_isomerase_KdsD CE141_03060 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 ASI14843 98 311 100.0 7e-106 PJR32596.1 ASI14842 97 509 100.0 1e-179 PJR32597.1 ASI14841 99 456 100.0 1e-160 PJR32599.1 ASI14839 100 611 100.0 0.0 >> 392. CP020025_0 Source: Escherichia coli strain WB61 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1887 Table of genes, locations, strands and annotations of subject cluster: AVJ14880 4035705 4036271 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC B1T56_20310 AVJ14881 4036268 4036843 + LPS_export_ABC_transporter_periplasmic_protein LptC B1T56_20315 AVJ14882 4036812 4037369 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA B1T56_20320 AVJ14883 4037376 4038101 + ABC_transporter_ATP-binding_protein B1T56_20325 AVJ14884 4038149 4039582 + RNA_polymerase_sigma-54_factor B1T56_20330 AVJ14885 4039605 4039892 + ribosome_hibernation_promoting_factor B1T56_20335 AVJ14886 4040010 4040501 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN B1T56_20340 AVJ14887 4040547 4041401 + RNase_adaptor_protein_RapZ B1T56_20345 AVJ14888 4041398 4041670 + phosphocarrier_protein_NPr B1T56_20350 AVJ14889 4041883 4042515 + hypothetical_protein B1T56_20355 AVJ14890 4042512 4043240 - monofunctional_biosynthetic_peptidoglycan transglycosylase B1T56_20360 AVJ14891 4043237 4043890 - glutamine_amidotransferase B1T56_20365 AVJ14892 4044120 4046456 - hybrid_sensor_histidine_kinase/response regulator B1T56_20370 AVJ15630 4046552 4047481 - TIGR01212_family_radical_SAM_protein B1T56_20375 AVJ14893 4047873 4048109 - hypothetical_protein B1T56_20380 B1T56_20385 4048007 4048233 - hypothetical_protein no_locus_tag AVJ14894 4048156 4052616 + glutamate_synthase_large_subunit B1T56_20390 AVJ14895 4052629 4054047 + glutamate_synthase_small_subunit B1T56_20395 AVJ14896 4054231 4055343 + hypothetical_protein B1T56_20400 AVJ14897 4055403 4055867 - hypothetical_protein B1T56_20405 AVJ14898 4055864 4056739 - N-acetylmannosamine_kinase B1T56_20410 AVJ14899 4056736 4057425 - N-acetylmannosamine-6-phosphate_2-epimerase B1T56_20415 AVJ14900 4057473 4058963 - MFS_transporter B1T56_20420 AVJ14901 4059072 4059965 - N-acetylneuraminate_lyase B1T56_20425 AVJ14902 4060087 4060878 - transcriptional_regulator_NanR B1T56_20430 B1T56_20435 4061148 4061258 - transposase no_locus_tag AVJ14903 4061258 4062625 + C4-dicarboxylate_transporter B1T56_20440 AVJ14904 4062669 4063166 - stringent_starvation_protein_B B1T56_20445 AVJ14905 4063172 4063810 - stringent_starvation_protein_A sspA AVJ14906 4063752 4063961 + hypothetical_protein B1T56_20455 AVJ14907 4064204 4064596 - 30S_ribosomal_protein_S9 B1T56_20460 AVJ14908 4064612 4065040 - 50S_ribosomal_protein_L13 B1T56_20465 AVJ14909 4065259 4066386 - cell_division_protein_ZapE B1T56_20470 AVJ14910 4066580 4066978 + hypothetical_protein B1T56_20475 AVJ14911 4067132 4068499 + periplasmic_pH-dependent_serine_endoprotease DegQ B1T56_20480 AVJ14912 4068589 4069656 + outer_membrane-stress_sensor_serine endopeptidase DegS B1T56_20485 AVJ14913 4069719 4070657 - malate_dehydrogenase B1T56_20490 AVJ14914 4071092 4071562 + arginine_repressor B1T56_20495 AVJ14915 4071927 4072190 + hypothetical_protein B1T56_20500 AVJ14916 4072247 4072519 - hypothetical_protein B1T56_20505 AVJ14917 4072611 4074578 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB B1T56_20510 AVJ14918 4074584 4075516 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA B1T56_20515 AVJ14919 4075524 4075727 - protein_AaeX B1T56_20520 AVJ14920 4075910 4076839 + HTH-type_transcriptional_activator_AaeR B1T56_20525 AVJ14921 4076967 4078412 - metalloprotease_TldD B1T56_20530 AVJ14922 4078568 4082368 - TIGR02099_family_protein B1T56_20535 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AVJ14897 98 311 100.0 7e-106 PJR32596.1 AVJ14898 97 509 100.0 1e-179 PJR32597.1 AVJ14899 99 456 100.0 1e-160 PJR32599.1 AVJ14901 100 611 100.0 0.0 >> 393. CP009859_0 Source: Escherichia coli strain ECONIH1, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1887 Table of genes, locations, strands and annotations of subject cluster: AIX65154 3804741 3805307 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase ECONIH1_18890 AIX65155 3805304 3805879 + lipopolysaccharide_transporter ECONIH1_18895 AIX65156 3805848 3806405 + lipopolysaccharide_transporter ECONIH1_18900 AIX65157 3806412 3807137 + sugar_ABC_transporter_ATP-binding_protein ECONIH1_18905 AIX65158 3807185 3808618 + RNA_polymerase_factor_sigma-54 ECONIH1_18910 AIX65159 3808641 3808928 + ribosome_hibernation_promoting_factor_HPF ECONIH1_18915 AIX65160 3809046 3809537 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) ECONIH1_18920 AIX65161 3809583 3810437 + glmZ(sRNA)-inactivating_NTPase ECONIH1_18925 AIX65162 3810434 3810706 + phosphohistidinoprotein-hexose phosphotransferase ECONIH1_18930 AIX65163 3810919 3811551 + hypothetical_protein ECONIH1_18935 AIX65164 3811548 3812276 - peptidoglycan_transglycosylase mtgA AIX65165 3812273 3812926 - isoprenoid_biosynthesis_protein ECONIH1_18945 AIX65166 3813156 3815492 - aerobic_respiration_control_sensor_protein_ArcB ECONIH1_18950 AIX66702 3815588 3816517 - hypothetical_protein ECONIH1_18955 AIX66703 3817191 3821651 + glutamate_synthase gltB AIX65167 3821664 3823082 + glutamate_synthase ECONIH1_18965 AIX65168 3823266 3824378 + hypothetical_protein ECONIH1_18970 AIX65169 3824438 3824902 - hypothetical_protein ECONIH1_18975 AIX65170 3824899 3825774 - N-acetylmannosamine_kinase ECONIH1_18980 AIX65171 3825771 3826460 - N-acetylmannosamine-6-phosphate_2-epimerase ECONIH1_18985 AIX65172 3826508 3827998 - sialic_acid_transporter ECONIH1_18990 AIX65173 3828107 3829000 - N-acetylneuraminate_lyase ECONIH1_18995 AIX65174 3829122 3829913 - transcriptional_regulator_NanR ECONIH1_19000 AIX65175 3830293 3831660 + C4-dicarboxylate_transporter ECONIH1_19005 AIX65176 3831704 3832201 - Clp_protease_ClpP ECONIH1_19010 AIX65177 3832207 3832845 - stringent_starvation_protein_A sspA AIX65178 3833239 3833631 - 30S_ribosomal_protein_S9 ECONIH1_19020 AIX65179 3833647 3834075 - 50S_ribosomal_protein_L13 ECONIH1_19025 AIX65180 3834294 3835421 - hypothetical_protein ECONIH1_19030 AIX65181 3835615 3836013 + hypothetical_protein ECONIH1_19035 AIX65182 3836167 3837534 + serine_endoprotease_DegQ ECONIH1_19040 AIX65183 3837624 3838691 + serine_endoprotease ECONIH1_19045 AIX65184 3838754 3839692 - malate_dehydrogenase ECONIH1_19050 AIX65185 3840127 3840597 + arginine_repressor ECONIH1_19055 AIX65186 3840962 3841225 + membrane_protein ECONIH1_19060 AIX65187 3841282 3841554 - hypothetical_protein ECONIH1_19065 AIX65188 3841646 3843613 - p-hydroxybenzoic_acid_efflux_subunit_AaeB ECONIH1_19070 AIX65189 3843619 3844551 - p-hydroxybenzoic_acid_efflux_subunit_AaeA ECONIH1_19075 AIX66704 3844559 3844762 - transporter ECONIH1_19080 AIX65190 3844945 3845874 + transcriptional_regulator ECONIH1_19085 AIX65191 3846002 3847447 - protease_TldD tldD AIX65192 3847603 3851403 - hypothetical_protein ECONIH1_19095 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AIX65169 98 311 100.0 7e-106 PJR32596.1 AIX65170 97 509 100.0 1e-179 PJR32597.1 AIX65171 99 456 100.0 1e-160 PJR32599.1 AIX65173 100 611 100.0 0.0 >> 394. CP008697_0 Source: Escherichia coli strain ST648, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1887 Table of genes, locations, strands and annotations of subject cluster: ALV70676 4403320 4403886 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase FH07_21920 ALV70677 4403883 4404458 + lipopolysaccharide_transporter FH07_21925 ALV70678 4404427 4404984 + lipopolysaccharide_transporter FH07_21930 ALV70679 4404991 4405716 + sugar_ABC_transporter_ATP-binding_protein FH07_21935 ALV70680 4405764 4407197 + RNA_polymerase_factor_sigma-54 FH07_21940 ALV70681 4407220 4407507 + ribosome_hibernation_promoting_factor_HPF FH07_21945 ALV70682 4407625 4408116 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) FH07_21950 ALV70683 4408162 4409016 + glmZ(sRNA)-inactivating_NTPase FH07_21955 ALV70684 4409013 4409285 + phosphohistidinoprotein-hexose phosphotransferase FH07_21960 ALV70685 4409498 4410130 + hypothetical_protein FH07_21965 ALV70686 4410127 4410855 - peptidoglycan_transglycosylase mtgA ALV70687 4410852 4411505 - isoprenoid_biosynthesis_protein FH07_21975 ALV70688 4411735 4414071 - aerobic_respiration_control_sensor_protein_ArcB FH07_21980 ALV70689 4414167 4415096 - hypothetical_protein FH07_21985 ALV70690 4415677 4420230 + glutamate_synthase gltB ALV70691 4420243 4421661 + glutamate_synthase FH07_22000 ALV70692 4421845 4422957 + hypothetical_protein FH07_22005 ALV70693 4423017 4423481 - hypothetical_protein FH07_22010 ALV70694 4423478 4424353 - N-acetylmannosamine_kinase FH07_22015 ALV70695 4424350 4425039 - N-acetylmannosamine-6-phosphate_2-epimerase FH07_22020 ALV70696 4425087 4426577 - sialic_acid_transporter FH07_22025 ALV70697 4426686 4427579 - N-acetylneuraminate_lyase FH07_22030 ALV70698 4427701 4428483 - transcriptional_regulator_NanR FH07_22035 ALV70699 4428872 4430239 + C4-dicarboxylate_transporter FH07_22040 ALV70700 4430283 4430780 - Clp_protease_ClpP FH07_22045 ALV70701 4430786 4431424 - stringent_starvation_protein_A sspA ALV70702 4431818 4432210 - 30S_ribosomal_protein_S9 FH07_22060 ALV70703 4432226 4432654 - 50S_ribosomal_protein_L13 FH07_22065 ALV70704 4432873 4434000 - hypothetical_protein FH07_22070 ALV70705 4434194 4434592 + hypothetical_protein FH07_22075 ALV70706 4434746 4436113 + serine_endoprotease_DegQ FH07_22080 ALV70707 4436203 4437270 + serine_endoprotease FH07_22085 ALV70708 4437333 4438271 - malate_dehydrogenase FH07_22090 ALV70709 4438706 4439176 + arginine_repressor FH07_22095 ALV70710 4439541 4439804 + membrane_protein FH07_22100 ALV70711 4439861 4440133 - hypothetical_protein FH07_22105 ALV70712 4440225 4442192 - p-hydroxybenzoic_acid_efflux_subunit_AaeB FH07_22110 ALV70713 4442198 4443130 - p-hydroxybenzoic_acid_efflux_subunit_AaeA FH07_22115 ALV70714 4443138 4443341 - transporter FH07_22120 ALV70715 4443524 4444453 + transcriptional_regulator FH07_22125 ALV70716 4444581 4446026 - protease_TldD tldD ALV70717 4446182 4449982 - hypothetical_protein FH07_22135 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 ALV70693 98 311 100.0 7e-106 PJR32596.1 ALV70694 97 509 100.0 1e-179 PJR32597.1 ALV70695 99 456 100.0 1e-160 PJR32599.1 ALV70697 100 611 100.0 0.0 >> 395. CP026399_0 Source: Escherichia coli strain ECONIH4 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1885 Table of genes, locations, strands and annotations of subject cluster: AUY03864 3787022 3788467 + metalloprotease_TldD C3F40_20105 AUY03865 3788595 3789524 - HTH-type_transcriptional_activator_AaeR C3F40_20110 AUY03866 3789707 3789910 + protein_AaeX C3F40_20115 AUY03867 3789918 3790850 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C3F40_20120 AUY03868 3790856 3792823 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C3F40_20125 AUY03869 3792915 3793187 + hypothetical_protein C3F40_20130 AUY03870 3793243 3793506 - DUF1471_domain-containing_protein C3F40_20135 AUY03871 3793871 3794341 - arginine_repressor C3F40_20140 AUY03872 3794776 3795714 + malate_dehydrogenase C3F40_20145 AUY03873 3795776 3796843 - outer_membrane-stress_sensor_serine endopeptidase DegS C3F40_20150 AUY03874 3796933 3798300 - periplasmic_pH-dependent_serine_endoprotease DegQ C3F40_20155 AUY03875 3798454 3798852 - hypothetical_protein C3F40_20160 AUY03876 3799046 3800173 + cell_division_protein_ZapE C3F40_20165 AUY03877 3800392 3800820 + 50S_ribosomal_protein_L13 C3F40_20170 AUY03878 3800836 3801228 + 30S_ribosomal_protein_S9 C3F40_20175 AUY03879 3801146 3801367 - hypothetical_protein C3F40_20180 AUY05412 3801472 3801681 - hypothetical_protein C3F40_20185 AUY03880 3801623 3802261 + stringent_starvation_protein_A C3F40_20190 AUY03881 3802267 3802764 + stringent_starvation_protein_B C3F40_20195 C3F40_20200 3802806 3803525 - C4-dicarboxylate_transporter no_locus_tag C3F40_20205 3803541 3804238 - IS1_family_transposase no_locus_tag C3F40_20210 3804195 3804293 - glycosyltransferase no_locus_tag AUY03882 3804487 3805278 + transcriptional_regulator_NanR nanR AUY03883 3805400 3806293 + N-acetylneuraminate_lyase nanA AUY03884 3806403 3807893 + MFS_transporter C3F40_20225 AUY03885 3807941 3808630 + N-acetylmannosamine-6-phosphate_2-epimerase C3F40_20230 AUY03886 3808627 3809502 + N-acetylmannosamine_kinase C3F40_20235 AUY03887 3809499 3809963 + YhcH/YjgK/YiaL_family_protein C3F40_20240 AUY03888 3810039 3810344 - transposase C3F40_20245 AUY03889 3810361 3810840 - DUF1016_domain-containing_protein C3F40_20250 AUY03890 3811024 3812442 - glutamate_synthase_small_subunit C3F40_20255 AUY03891 3812455 3816915 - glutamate_synthase_subunit_alpha C3F40_20260 C3F40_20265 3816838 3817064 + hypothetical_protein no_locus_tag AUY03892 3816962 3817198 + hypothetical_protein C3F40_20270 AUY05413 3817590 3818519 + TIGR01212_family_radical_SAM_protein C3F40_20275 AUY03893 3818615 3820951 + hybrid_sensor_histidine_kinase/response regulator C3F40_20280 AUY03894 3821181 3821834 + glutamine_amidotransferase C3F40_20285 AUY03895 3821831 3822559 + monofunctional_biosynthetic_peptidoglycan transglycosylase C3F40_20290 AUY03896 3822556 3823188 - protein_YrbL yrbL AUY03897 3823402 3823674 - phosphocarrier_protein_NPr C3F40_20300 AUY03898 3823671 3824525 - RNase_adaptor_protein_RapZ C3F40_20305 AUY03899 3824571 3825062 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C3F40_20310 AUY03900 3825180 3825467 - ribosome_hibernation_promoting_factor C3F40_20315 AUY03901 3825490 3826923 - RNA_polymerase_sigma-54_factor C3F40_20320 AUY03902 3826971 3827696 - ABC_transporter_ATP-binding_protein lptB AUY03903 3827703 3828260 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C3F40_20330 AUY03904 3828229 3828804 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC AUY03905 3828801 3829367 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC C3F40_20340 AUY03906 3829388 3830374 - arabinose-5-phosphate_isomerase_KdsD C3F40_20345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AUY03887 98 311 100.0 7e-106 PJR32596.1 AUY03886 97 508 100.0 5e-179 PJR32597.1 AUY03885 99 456 100.0 1e-160 PJR32599.1 AUY03883 100 611 100.0 0.0 >> 396. CP022154_0 Source: Escherichia coli strain ABWA45 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 5 MultiGeneBlast score: 5.0 Cumulative Blast bit score: 1885 Table of genes, locations, strands and annotations of subject cluster: ASG48007 542865 544310 + metalloprotease_TldD CES94_02810 ASG48008 544438 545367 - HTH-type_transcriptional_activator_AaeR CES94_02815 ASG48009 545550 545753 + protein_AaeX CES94_02820 ASG48010 545761 546693 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CES94_02825 ASG48011 546699 548666 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CES94_02830 ASG48012 548758 549030 + hypothetical_protein CES94_02835 ASG48013 549086 549349 - hypothetical_protein CES94_02840 ASG48014 549714 550184 - arginine_repressor CES94_02845 ASG48015 550619 551557 + malate_dehydrogenase CES94_02850 ASG48016 551619 552686 - outer_membrane-stress_sensor_serine endopeptidase DegS CES94_02855 ASG48017 552776 554143 - periplasmic_pH-dependent_serine_endoprotease DegQ CES94_02860 ASG52164 554297 554695 - hypothetical_protein CES94_02865 ASG48018 554889 556016 + cell_division_protein_ZapE CES94_02870 ASG48019 556235 556663 + 50S_ribosomal_protein_L13 CES94_02875 ASG48020 556679 557071 + 30S_ribosomal_protein_S9 CES94_02880 ASG48021 556989 557210 - hypothetical_protein CES94_02885 ASG52165 557315 557524 - hypothetical_protein CES94_02890 ASG48022 557466 558104 + stringent_starvation_protein_A CES94_02895 ASG48023 558110 558607 + stringent_starvation_protein_B CES94_02900 CES94_02905 558649 559368 - C4-dicarboxylate_transporter no_locus_tag CES94_02910 559384 560081 - IS1_family_transposase no_locus_tag CES94_02915 560038 560136 - glycosyl_transferase no_locus_tag ASG48024 560330 561121 + transcriptional_regulator_NanR CES94_02920 ASG48025 561243 562136 + N-acetylneuraminate_lyase nanA ASG48026 562246 563736 + MFS_transporter CES94_02930 ASG48027 563784 564473 + N-acetylmannosamine-6-phosphate_2-epimerase CES94_02935 ASG48028 564470 565345 + N-acetylmannosamine_kinase CES94_02940 ASG48029 565342 565806 + YhcH/YjgK/YiaL_family_protein CES94_02945 ASG48030 565882 566187 - transposase CES94_02950 ASG48031 566204 566683 - hypothetical_protein CES94_02955 ASG48032 566867 568285 - glutamate_synthase_small_subunit CES94_02960 CES94_02965 568298 572757 - glutamate_synthase_large_subunit no_locus_tag CES94_02970 572680 572906 + hypothetical_protein no_locus_tag ASG48033 572804 573040 + hypothetical_protein CES94_02975 ASG52166 573432 574361 + TIGR01212_family_radical_SAM_protein CES94_02980 ASG48034 574457 576793 + aerobic_respiration_two-component_sensor histidine kinase ArcB CES94_02985 ASG48035 577023 577676 + glutamine_amidotransferase CES94_02990 ASG48036 577673 578401 + monofunctional_biosynthetic_peptidoglycan transglycosylase CES94_02995 ASG48037 578398 579030 - hypothetical_protein CES94_03000 ASG48038 579244 579516 - phosphocarrier_protein_NPr CES94_03005 ASG48039 579513 580367 - RNase_adaptor_protein_RapZ CES94_03010 ASG48040 580413 580904 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN CES94_03015 ASG48041 581022 581309 - ribosome_hibernation_promoting_factor raiA ASG48042 581332 582765 - RNA_polymerase_sigma-54_factor CES94_03025 ASG48043 582813 583538 - ABC_transporter_ATP-binding_protein lptB ASG48044 583545 584102 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA CES94_03035 ASG48045 584071 584646 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC ASG48046 584643 585209 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC CES94_03045 ASG48047 585230 586216 - D-arabinose_5-phosphate_isomerase CES94_03050 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 ASG48029 98 311 100.0 7e-106 PJR32596.1 ASG48028 97 508 100.0 5e-179 PJR32597.1 ASG48027 99 456 100.0 1e-160 PJR32599.1 ASG48025 100 611 100.0 0.0 >> 397. CP019778_0 Source: Escherichia coli strain NCTC86 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2810 Table of genes, locations, strands and annotations of subject cluster: AQU00967 3688948 3689802 + RNase_adaptor_protein_RapZ B0915_19375 AQU00968 3689799 3690071 + phosphocarrier_protein_NPr B0915_19380 AQU00969 3690285 3690917 + hypothetical_protein B0915_19385 AQU00970 3690914 3691642 - monofunctional_biosynthetic_peptidoglycan transglycosylase B0915_19390 AQU00971 3691639 3692292 - glutamine_amidotransferase B0915_19395 B0915_19400 3692522 3694848 - aerobic_respiration_two-component_sensor histidine kinase ArcB no_locus_tag AQU02438 3694944 3695873 - TIGR01212_family_radical_SAM_protein B0915_19405 AQU00972 3696265 3696501 - hypothetical_protein B0915_19410 B0915_19415 3696399 3696625 - hypothetical_protein no_locus_tag AQU00973 3696548 3701008 + glutamate_synthase_large_subunit B0915_19420 AQU00974 3701021 3702439 + glutamate_synthase B0915_19425 AQU00975 3702417 3702602 - hypothetical_protein B0915_19430 AQU00976 3702594 3702878 + hypothetical_protein B0915_19435 AQU00977 3702999 3703763 + glutamate_synthase_operon_protein_GltF B0915_19440 AQU00978 3703935 3704609 + fimbrial_chaperone_protein B0915_19445 AQU00979 3704630 3707011 + fimbrial_protein B0915_19450 AQU00980 3707008 3707553 + hypothetical_protein B0915_19455 AQU00981 3707550 3708266 + hypothetical_protein B0915_19460 AQU00982 3708451 3709578 + hypothetical_protein B0915_19465 AQU00983 3709638 3710102 - hypothetical_protein B0915_19470 AQU00984 3710099 3710974 - N-acetylmannosamine_kinase B0915_19475 AQU00985 3710971 3711660 - N-acetylmannosamine-6-phosphate_2-epimerase B0915_19480 AQU00986 3711708 3713198 - MFS_transporter B0915_19485 AQU00987 3713307 3714200 - N-acetylneuraminate_lyase B0915_19490 AQU00988 3714322 3715113 - transcriptional_regulator_NanR B0915_19495 B0915_19500 3715383 3715493 - transposase no_locus_tag B0915_19505 3715493 3716859 + C4-dicarboxylate_transporter no_locus_tag AQU00989 3716902 3717399 - stringent_starvation_protein_B B0915_19510 AQU00990 3717405 3718043 - stringent_starvation_protein_A sspA AQU00991 3718438 3718830 - 30S_ribosomal_protein_S9 B0915_19520 AQU00992 3718846 3719274 - 50S_ribosomal_protein_L13 B0915_19525 AQU00993 3719493 3720620 - cell_division_protein_ZapE B0915_19530 AQU00994 3720814 3721212 + hypothetical_protein B0915_19535 AQU00995 3721366 3722733 + periplasmic_pH-dependent_serine_endoprotease DegQ B0915_19540 AQU00996 3722823 3723890 + outer_membrane-stress_sensor_serine endopeptidase DegS B0915_19545 AQU00997 3723953 3724891 - malate_dehydrogenase B0915_19550 AQU00998 3725326 3725796 + arginine_repressor B0915_19555 AQU00999 3726161 3726424 + hypothetical_protein B0915_19560 AQU01000 3726480 3727826 - IS4_family_transposase B0915_19565 AQU01001 3727919 3728191 - hypothetical_protein B0915_19570 AQU01002 3728283 3730250 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB B0915_19575 AQU01003 3730256 3731188 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA B0915_19580 AQU01004 3731196 3731399 - protein_AaeX B0915_19585 AQU01005 3731582 3732511 + HTH-type_transcriptional_activator_AaeR B0915_19590 AQU01006 3732645 3734090 - metalloprotease_TldD B0915_19595 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AQU00982 90 684 107.449856734 0.0 PJR32596.1 AQU00984 96 525 100.0 0.0 PJR32598.1 AQU00986 99 990 100.0 0.0 PJR32599.1 AQU00987 100 611 100.0 0.0 >> 398. CP034745_0 Source: Escherichia coli strain L100 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2666 Table of genes, locations, strands and annotations of subject cluster: AZU70273 494413 495858 + metalloprotease_TldD tldD AZU70274 495992 496921 - HTH-type_transcriptional_activator_AaeR aaeR AZU70275 497104 497307 + DUF1656_domain-containing_protein EM855_02405 AZU70276 497315 498247 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AZU70277 498253 500220 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AZU70278 500312 500584 + hypothetical_protein EM855_02420 AZU73802 500640 500903 - DUF1471_domain-containing_protein EM855_02425 AZU70279 501268 501738 - transcriptional_regulator_ArgR argR AZU70280 502173 503111 + malate_dehydrogenase EM855_02435 AZU70281 503174 504241 - serine_endoprotease_DegS degS AZU70282 504331 505698 - serine_endoprotease_DegQ degQ AZU70283 505852 506250 - DUF1043_family_protein EM855_02450 AZU70284 506444 507571 + cell_division_protein_ZapE zapE AZU70285 507790 508218 + 50S_ribosomal_protein_L13 EM855_02460 AZU70286 508234 508626 + 30S_ribosomal_protein_S9 EM855_02465 AZU70287 509021 509659 + stringent_starvation_protein_A EM855_02470 AZU70288 509665 510162 + ClpXP_protease_specificity-enhancing_factor EM855_02475 AZU70289 510204 511571 - C4-dicarboxylate_transporter_DcuC dcuC AZU70290 511951 512742 + transcriptional_regulator_NanR EM855_02485 AZU70291 512864 513757 + N-acetylneuraminate_lyase nanA AZU70292 513867 515357 + MFS_transporter EM855_02495 AZU70293 515405 516094 + N-acetylmannosamine-6-phosphate_2-epimerase EM855_02500 AZU70294 516091 516966 + ROK_family_protein EM855_02505 AZU70295 516963 517427 + YhcH/YjgK/YiaL_family_protein EM855_02510 AZU70296 517487 518614 - DUF1016_domain-containing_protein EM855_02515 AZU70297 518799 519515 - DUF1120_domain-containing_protein EM855_02520 AZU70298 519512 520057 - hypothetical_protein EM855_02525 AZU70299 520054 522435 - fimbrial_protein EM855_02530 AZU70300 522456 523130 - fimbrial_chaperone_protein EM855_02535 AZU70301 523302 524066 - DUF1120_domain-containing_protein EM855_02540 AZU70302 524626 526044 - glutamate_synthase EM855_02545 AZU70303 526057 530517 - glutamate_synthase_subunit_alpha EM855_02550 AZU70304 531192 532121 + TIGR01212_family_radical_SAM_protein EM855_02555 AZU70305 532217 534553 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB AZU70306 534783 535436 + isoprenoid_biosynthesis_protein_ElbB elbB AZU70307 535433 536161 + monofunctional_biosynthetic_peptidoglycan transglycosylase EM855_02570 AZU70308 536158 536790 - PhoP_regulatory_network_protein_YrbL yrbL AZU70309 537004 537276 - PTS_phosphocarrier_protein_NPr EM855_02580 AZU70310 537273 538127 - RNase_adaptor_protein_RapZ EM855_02585 AZU70311 538173 538664 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AZU70296 90 684 107.449856734 0.0 PJR32597.1 AZU70293 99 456 100.0 1e-160 PJR32598.1 AZU70292 99 990 100.0 0.0 PJR32600.1 AZU70290 99 536 100.0 0.0 >> 399. CP034727_0 Source: Escherichia coli strain L41-1 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2666 Table of genes, locations, strands and annotations of subject cluster: AZU74752 494413 495858 + metalloprotease_TldD tldD AZU74753 495992 496921 - HTH-type_transcriptional_activator_AaeR aaeR AZU74754 497104 497307 + DUF1656_domain-containing_protein ELE40_02405 AZU74755 497315 498247 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AZU74756 498253 500220 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AZU74757 500312 500584 + hypothetical_protein ELE40_02420 AZU74758 500640 500903 - DUF1471_domain-containing_protein ELE40_02425 AZU74759 501268 501738 - transcriptional_regulator_ArgR argR AZU74760 502173 503111 + malate_dehydrogenase ELE40_02435 AZU74761 503174 504241 - serine_endoprotease_DegS degS AZU74762 504331 505698 - serine_endoprotease_DegQ degQ AZU74763 505852 506250 - DUF1043_family_protein ELE40_02450 AZU74764 506444 507571 + cell_division_protein_ZapE zapE AZU74765 507790 508218 + 50S_ribosomal_protein_L13 ELE40_02460 AZU74766 508234 508626 + 30S_ribosomal_protein_S9 ELE40_02465 AZU74767 509021 509659 + stringent_starvation_protein_A ELE40_02470 AZU74768 509665 510162 + ClpXP_protease_specificity-enhancing_factor ELE40_02475 AZU74769 510204 511571 - C4-dicarboxylate_transporter_DcuC dcuC AZU74770 511951 512742 + transcriptional_regulator_NanR ELE40_02485 AZU74771 512864 513757 + N-acetylneuraminate_lyase nanA AZU74772 513867 515357 + MFS_transporter ELE40_02495 AZU74773 515405 516094 + N-acetylmannosamine-6-phosphate_2-epimerase ELE40_02500 AZU74774 516091 516966 + ROK_family_protein ELE40_02505 AZU74775 516963 517427 + YhcH/YjgK/YiaL_family_protein ELE40_02510 AZU74776 517487 518614 - DUF1016_domain-containing_protein ELE40_02515 AZU74777 518799 519515 - DUF1120_domain-containing_protein ELE40_02520 AZU74778 519512 520057 - hypothetical_protein ELE40_02525 AZU74779 520054 522435 - fimbrial_protein ELE40_02530 AZU74780 522456 523130 - fimbrial_chaperone_protein ELE40_02535 AZU74781 523302 524066 - DUF1120_domain-containing_protein ELE40_02540 AZU74782 524626 526044 - glutamate_synthase ELE40_02545 AZU74783 526057 530517 - glutamate_synthase_subunit_alpha ELE40_02550 AZU74784 531192 532121 + TIGR01212_family_radical_SAM_protein ELE40_02555 AZU74785 532217 534553 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB AZU74786 534783 535436 + isoprenoid_biosynthesis_protein_ElbB elbB AZU74787 535433 536161 + monofunctional_biosynthetic_peptidoglycan transglycosylase ELE40_02570 AZU74788 536158 536790 - PhoP_regulatory_network_protein_YrbL yrbL AZU74789 537004 537276 - PTS_phosphocarrier_protein_NPr ELE40_02580 AZU74790 537273 538127 - RNase_adaptor_protein_RapZ ELE40_02585 AZU74791 538173 538664 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AZU74776 90 684 107.449856734 0.0 PJR32597.1 AZU74773 99 456 100.0 1e-160 PJR32598.1 AZU74772 99 990 100.0 0.0 PJR32600.1 AZU74770 99 536 100.0 0.0 >> 400. CP010231_0 Source: Escherichia coli strain S30, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2666 Table of genes, locations, strands and annotations of subject cluster: APL61443 2641139 2641993 + glmZ(sRNA)-inactivating_NTPase RG68_13045 APL61444 2641990 2642262 + phosphohistidinoprotein-hexose phosphotransferase RG68_13050 APL61445 2642476 2643108 + hypothetical_protein RG68_13055 APL61446 2643105 2643833 - peptidoglycan_transglycosylase mtgA APL61447 2643830 2644483 - isoprenoid_biosynthesis_protein RG68_13065 APL61448 2644713 2647049 - aerobic_respiration_control_sensor_protein_ArcB RG68_13070 APL63396 2647145 2648074 - hypothetical_protein RG68_13075 APL63397 2648749 2653209 + glutamate_synthase gltB APL61449 2653222 2654640 + glutamate_synthase RG68_13085 APL61450 2655200 2655964 + gltF RG68_13090 APL61451 2656136 2656810 + fimbrial_chaperone_protein RG68_13095 APL61452 2656831 2659212 + fimbrial_protein RG68_13100 APL61453 2659209 2659754 + hypothetical_protein RG68_13105 APL61454 2659751 2660467 + hypothetical_protein RG68_13110 APL61455 2660652 2661779 + hypothetical_protein RG68_13115 APL61456 2661839 2662303 - hypothetical_protein RG68_13120 APL61457 2662300 2663175 - N-acetylmannosamine_kinase RG68_13125 APL61458 2663172 2663861 - N-acetylmannosamine-6-phosphate_2-epimerase RG68_13130 APL61459 2663909 2665399 - sialic_acid_transporter RG68_13135 APL61460 2665509 2666402 - N-acetylneuraminate_lyase RG68_13140 APL61461 2666524 2667315 - transcriptional_regulator_NanR RG68_13145 APL61462 2667695 2669062 + C4-dicarboxylate_transporter RG68_13150 APL61463 2669104 2669601 - Clp_protease_ClpP RG68_13155 APL61464 2669607 2670245 - stringent_starvation_protein_A sspA APL61465 2670640 2671032 - 30S_ribosomal_protein_S9 RG68_13165 APL61466 2671048 2671476 - 50S_ribosomal_protein_L13 RG68_13170 APL61467 2671695 2672822 - hypothetical_protein RG68_13175 APL61468 2673016 2673414 + hypothetical_protein RG68_13180 APL61469 2673568 2674935 + serine_endoprotease_DegQ RG68_13185 APL61470 2675025 2676092 + serine_endoprotease RG68_13190 APL61471 2676155 2677093 - malate_dehydrogenase RG68_13195 APL61472 2677528 2677998 + arginine_repressor RG68_13200 APL63398 2678363 2678626 + membrane_protein RG68_13205 APL61473 2678682 2678954 - hypothetical_protein RG68_13210 APL61474 2679046 2681013 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG68_13215 APL61475 2681019 2681951 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG68_13220 APL63399 2681959 2682162 - transporter RG68_13225 APL61476 2682345 2683274 + transcriptional_regulator RG68_13230 APL61477 2683408 2684853 - protease_TldD tldD APL61478 2685283 2689083 - hypothetical_protein RG68_13240 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APL61455 90 684 107.449856734 0.0 PJR32597.1 APL61458 99 456 100.0 1e-160 PJR32598.1 APL61459 99 990 100.0 0.0 PJR32600.1 APL61461 99 536 100.0 0.0 >> 401. CP043733_0 Source: Escherichia coli strain CVM N17EC1164 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2664 Table of genes, locations, strands and annotations of subject cluster: QEP59690 513461 514906 + metalloprotease_TldD tldD QEP59691 515040 515969 - HTH-type_transcriptional_activator_AaeR aaeR QEP59692 516152 516355 + DUF1656_domain-containing_protein D9I79_02470 QEP59693 516363 517295 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QEP59694 517301 519268 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QEP59695 519360 519632 + hypothetical_protein D9I79_02485 QEP59696 519688 519951 - peroxide/acid_stress_response_protein_YhcN yhcN QEP59697 520316 520786 - transcriptional_regulator_ArgR argR QEP59698 521221 522159 + malate_dehydrogenase mdh QEP59699 522222 523289 - serine_endoprotease_DegS D9I79_02505 QEP59700 523379 524746 - serine_endoprotease_DegQ degQ QEP59701 524900 525298 - DUF1043_family_protein D9I79_02515 QEP59702 525492 526619 + cell_division_protein_ZapE D9I79_02520 QEP59703 526838 527266 + 50S_ribosomal_protein_L13 rplM QEP59704 527282 527674 + 30S_ribosomal_protein_S9 rpsI QEP59705 528069 528707 + stringent_starvation_protein_A sspA QEP59706 528713 529210 + ClpXP_protease_specificity-enhancing_factor sspB QEP59707 529253 530620 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QEP59708 531000 531791 + transcriptional_regulator_NanR nanR QEP59709 531913 532806 + N-acetylneuraminate_lyase nanA QEP59710 532915 534405 + sialic_acid_transporter_NanT nanT QEP59711 534453 535142 + N-acetylmannosamine-6-phosphate_2-epimerase D9I79_02565 QEP59712 535139 536014 + N-acetylmannosamine_kinase D9I79_02570 QEP59713 536011 536475 + DUF386_domain-containing_protein D9I79_02575 QEP59714 536535 537662 - DUF1016_domain-containing_protein D9I79_02580 QEP59715 537847 538563 - DUF1120_domain-containing_protein D9I79_02585 QEP59716 538560 539105 - hypothetical_protein D9I79_02590 QEP59717 539102 541483 - fimbrial_biogenesis_outer_membrane_usher protein D9I79_02595 QEP59718 541504 542178 - fimbria/pilus_periplasmic_chaperone D9I79_02600 QEP59719 542350 543114 - DUF1120_domain-containing_protein D9I79_02605 QEP59720 543674 545092 - glutamate_synthase D9I79_02610 QEP63337 545105 549565 - glutamate_synthase_large_subunit gltB QEP59721 550240 551169 + TIGR01212_family_radical_SAM_protein D9I79_02620 QEP59722 551265 553601 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QEP59723 553831 554484 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QEP59724 554481 555209 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QEP59725 555206 555838 - PhoP_regulatory_network_protein_YrbL yrbL QEP59726 556052 556324 - PTS_phosphocarrier_protein_NPr npr QEP59727 556321 557175 - RNase_adapter_RapZ rapZ QEP59728 557221 557712 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QEP59714 90 682 107.449856734 0.0 PJR32597.1 QEP59711 99 456 100.0 1e-160 PJR32598.1 QEP59710 99 990 100.0 0.0 PJR32600.1 QEP59708 99 536 100.0 0.0 >> 402. CP026085_0 Source: Escherichia coli strain DH5alpha chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2539 Table of genes, locations, strands and annotations of subject cluster: AUT07472 502477 503922 + metalloprotease_TldD C1467_02645 AUT07473 504056 504985 - HTH-type_transcriptional_activator_AaeR C1467_02650 AUT07474 505168 505371 + protein_AaeX C1467_02655 AUT07475 505379 506311 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C1467_02660 AUT07476 506317 508284 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C1467_02665 AUT07477 508376 508648 + hypothetical_protein C1467_02670 AUT07478 508704 508967 - DUF1471_domain-containing_protein C1467_02675 AUT07479 509332 509802 - arginine_repressor C1467_02680 AUT07480 510237 511175 + malate_dehydrogenase C1467_02685 AUT07481 511238 512305 - outer_membrane-stress_sensor_serine endopeptidase DegS C1467_02690 AUT07482 512395 513762 - periplasmic_pH-dependent_serine_endoprotease DegQ C1467_02695 AUT07483 513916 514314 - hypothetical_protein C1467_02700 AUT07484 514508 515635 + cell_division_protein_ZapE C1467_02705 AUT07485 515854 516282 + 50S_ribosomal_protein_L13 C1467_02710 AUT07486 516298 516690 + 30S_ribosomal_protein_S9 C1467_02715 AUT07487 516608 516829 - hypothetical_protein C1467_02720 AUT11501 516803 516982 + hypothetical_protein C1467_02725 AUT11500 516934 517143 - hypothetical_protein C1467_02730 AUT07488 517085 517723 + stringent_starvation_protein_A C1467_02735 AUT07489 517729 518226 + stringent_starvation_protein_B C1467_02740 AUT07490 518269 519636 - C4-dicarboxylate_transporter C1467_02745 C1467_02750 519636 519746 + transposase no_locus_tag AUT07491 520016 520807 + transcriptional_regulator_NanR nanR AUT07492 520929 521822 + N-acetylneuraminate_lyase nanA AUT07493 521931 523421 + MFS_transporter C1467_02765 AUT07494 523469 524158 + N-acetylmannosamine-6-phosphate_2-epimerase C1467_02770 AUT07495 524155 525030 + N-acetylmannosamine_kinase C1467_02775 AUT07496 525027 525491 + YhcH/YjgK/YiaL_family_protein C1467_02780 AUT07497 525551 526678 - DUF1016_domain-containing_protein C1467_02785 AUT07498 526862 528280 - glutamate_synthase C1467_02790 AUT07499 528293 532753 - glutamate_synthase_large_subunit C1467_02795 C1467_02800 532676 532902 + hypothetical_protein no_locus_tag AUT07500 532800 533036 + hypothetical_protein C1467_02805 AUT11502 533428 534357 + TIGR01212_family_radical_SAM_protein C1467_02810 AUT07501 534453 536789 + hybrid_sensor_histidine_kinase/response regulator C1467_02815 AUT07502 537019 537672 + glutamine_amidotransferase C1467_02820 AUT07503 537669 538397 + monofunctional_biosynthetic_peptidoglycan transglycosylase C1467_02825 AUT07504 538394 539026 - protein_YrbL yrbL AUT07505 539240 539512 - phosphocarrier_protein_NPr C1467_02835 AUT07506 539509 540363 - RNase_adaptor_protein_RapZ C1467_02840 AUT07507 540409 540900 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN C1467_02845 AUT07508 541018 541305 - ribosome_hibernation_promoting_factor C1467_02850 AUT07509 541328 542761 - RNA_polymerase_sigma-54_factor C1467_02855 AUT07510 542809 543534 - ABC_transporter_ATP-binding_protein lptB AUT07511 543541 544098 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA C1467_02865 AUT07512 544067 544642 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC AUT07513 544639 545205 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC C1467_02875 AUT07514 545226 546212 - arabinose_5-phosphate_isomerase_KdsD C1467_02880 AUT07515 546226 547203 - calcium/sodium_antiporter C1467_02885 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AUT07497 92 701 107.449856734 0.0 PJR32595.1 AUT07496 98 311 100.0 7e-106 PJR32598.1 AUT07493 99 990 100.0 0.0 PJR32600.1 AUT07491 100 537 100.0 0.0 >> 403. CP006584_0 Source: Escherichia coli LY180, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2539 Table of genes, locations, strands and annotations of subject cluster: AGW10299 3470089 3471075 + D-arabinose_5-phosphate_isomerase LY180_16510 AGW10300 3471096 3471662 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase LY180_16515 AGW10301 3471659 3472234 + sugar_ABC_transporter_substrate-binding_protein LY180_16520 AGW10302 3472203 3472760 + sugar_ABC_transporter_substrate-binding_protein LY180_16525 AGW11777 3472767 3473492 + lipopolysaccharide_ABC_transporter_ATP-binding protein LY180_16530 AGW10303 3473540 3474973 + RNA_polymerase_factor_sigma-54 LY180_16535 AGW10304 3474996 3475283 + ribosome_hibernation_promoting_factor_HPF LY180_16540 AGW10305 3475401 3475892 + PTS_sugar_transporter_subunit_IIA LY180_16545 AGW10306 3475938 3476792 + glmZ(sRNA)-inactivating_NTPase LY180_16550 AGW10307 3476789 3477061 + phosphohistidinoprotein-hexose phosphotransferase LY180_16555 AGW10308 3477275 3477907 + hypothetical_protein LY180_16560 AGW10309 3477904 3478632 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AGW10310 3478629 3479282 - isoprenoid_biosynthesis_protein LY180_16570 AGW10311 3479512 3481848 - aerobic_respiration_control_sensor_protein_ArcB LY180_16575 AGW10312 3481944 3482906 - hypothetical_protein LY180_16580 AGW11778 3482919 3483023 - hypothetical_protein LY180_16585 AGW10313 3483440 3488008 + glutamate_synthase_subunit_alpha gltB AGW10314 3488021 3489439 + glutamate_synthase_subunit_beta LY180_16595 AGW11779 3489623 3490750 + hypothetical_protein LY180_16600 AGW10315 3490810 3491274 - hypothetical_protein LY180_16605 AGW10316 3491271 3492146 - N-acetylmannosamine_kinase LY180_16610 AGW10317 3492143 3492832 - N-acetylmannosamine-6-phosphate_2-epimerase LY180_16615 AGW10318 3492880 3494370 - sialic_acid_transporter LY180_16620 AGW10319 3494479 3495372 - N-acetylneuraminate_lyase LY180_16625 AGW10320 3495494 3496285 - transcriptional_regulator LY180_16630 AGW10321 3496665 3498032 + C4-dicarboxylate_ABC_transporter LY180_16635 AGW10322 3498075 3498572 - peptidase LY180_16640 AGW10323 3498578 3499216 - stringent_starvation_protein_A sspA AGW10324 3499611 3500003 - 30S_ribosomal_protein_S9 LY180_16650 AGW10325 3500019 3500447 - 50S_ribosomal_protein_L13 LY180_16655 AGW10326 3500666 3501793 - hypothetical_protein LY180_16660 AGW10327 3501987 3502385 + hypothetical_protein LY180_16665 AGW10328 3502539 3503906 + serine_endoprotease_DegQ LY180_16670 AGW10329 3503996 3505063 + serine_endoprotease LY180_16675 AGW10330 3505126 3506064 - malate_dehydrogenase LY180_16680 AGW10331 3506499 3506969 + arginine_repressor LY180_16685 AGW10332 3507334 3507597 + membrane_protein LY180_16690 AGW10333 3507653 3507925 - hypothetical_protein LY180_16695 AGW10334 3508017 3509984 - hydroxybenzoic_acid_transporter LY180_16700 AGW10335 3509990 3510922 - hydroxybenzoic_acid_transporter LY180_16705 AGW10336 3510930 3511202 - electron_transfer_flavoprotein_FixA LY180_16710 AGW10337 3511316 3512245 + transcriptional_regulator LY180_16715 AGW10338 3512379 3513824 - protease_TldD tldD AGW10339 3514163 3517963 - membrane_protein LY180_16725 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AGW11779 92 701 107.449856734 0.0 PJR32595.1 AGW10315 98 311 100.0 7e-106 PJR32598.1 AGW10318 99 990 100.0 0.0 PJR32600.1 AGW10320 100 537 100.0 0.0 >> 404. CP045977_0 Source: Escherichia coli strain INSC1002 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2349 Table of genes, locations, strands and annotations of subject cluster: QIJ93612 3179939 3180505 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC QGJ10274 3180502 3181077 + lipopolysaccharide_transport_system_protein LptC lptC QIJ93321 3181046 3181603 + lipopolysaccharide_transport_system_protein LptA lptA QGJ10276 3181610 3182335 + lipopolysaccharide_transport_system_ATP_binding protein lptB QGJ10277 3182383 3183816 + RNA_polymerase,_sigma_54_(sigma_N)_factor rpoN QGJ10278 3183839 3184126 + ribosome_hibernation-promoting_factor hpf QGJ10279 3184244 3184735 + phosphotransferase_system_enzyme_IIA(Ntr) ptsN QGJ10280 3184781 3185635 + RNase_adaptor_protein rapZ QIJ93354 3185632 3185904 + phosphorelay_protein_Npr npr QGJ10282 3186118 3186750 + protein_kinase-like_domain-containing_protein YrbL yrbL QGJ10283 3186747 3187475 - peptidoglycan_glycosyltransferase_MtgA mtgA QIJ93739 3187472 3188125 - low_activity_glyoxalase_ElbB elbB QGJ10285 3188355 3190691 - sensory_histidine_kinase_ArcB arcB QGJ10286 3190787 3191716 - radical_SAM_family_oxidoreductase_YhcC yhcC QGJ11556 3192391 3196851 + glutamate_synthase_subunit_GltB gltB QGJ10287 3196864 3198282 + glutamate_synthase_subunit_GltD gltD QGJ10289 3198962 3199267 + transposase GI529_G0002679 QIJ93544 3199343 3199807 - DUF386_domain-containing_protein_YhcH yhcH QIJ93594 3199804 3200679 - N-acetylmannosamine_kinase nanK QGJ10292 3200676 3201365 - putative_N-acetylmannosamine-6-phosphate epimerase nanE QGJ10293 3201413 3202903 - N-acetylneuraminate:H(+)_symporter nanT QGJ10294 3203012 3203905 - N-acetylneuraminate_lyase nanA QGJ10295 3204027 3204818 - DNA-binding_transcriptional_dual_regulator_NanR nanR QGJ10296 3205198 3206565 + putative_transporter_DcuD dcuD QGJ10297 3206608 3207105 - ClpXP_protease_specificity-enhancing_factor sspB QGJ10298 3207111 3207749 - stringent_starvation_protein_A sspA QGJ10299 3208144 3208536 - 30S_ribosomal_subunit_protein_S9 rpsI QGJ10300 3208552 3208980 - 50S_ribosomal_subunit_protein_L13 rplM QGJ10301 3209199 3210326 - cell_division_factor_ZapE_with_ATPase_activity zapE QGJ10302 3210520 3210918 + conserved_protein_YhcB yhcB QGJ10303 3211072 3212439 + periplasmic_serine_endoprotease degQ QGJ10304 3212529 3213596 + serine_endoprotease degS QGJ10305 3213658 3214596 - malate_dehydrogenase mdh QGJ10306 3215031 3215501 + DNA-binding_transcriptional_dual_regulator_ArgR argR QGJ10307 3215866 3216129 + DUF1471_domain-containing_stress-induced_protein YhcN yhcN QGJ10308 3216185 3216457 - putative_barnase_inhibitor yhcO QGJ10309 3216549 3218516 - aromatic_carboxylic_acid_efflux_pump_subunit AaeB aaeB QGJ10310 3218522 3219454 - aromatic_carboxylic_acid_efflux_pump_membrane fusion protein aaeA QGJ10311 3219462 3219665 - DUF1656_domain-containing_protein_AaeX aaeX QGJ10312 3219848 3220777 + LysR-type_transcriptional_regulator_AaeR aaeR QGJ10313 3220905 3222350 - metalloprotease_TldD tldD QGJ10314 3222780 3226580 - AsmA2_domain-containing_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QIJ93544 98 314 100.0 3e-107 PJR32596.1 QIJ93594 97 508 100.0 5e-179 PJR32598.1 QGJ10293 99 990 100.0 0.0 PJR32600.1 QGJ10295 100 537 100.0 0.0 >> 405. CP020368_0 Source: Escherichia coli strain BLR(DE3) chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2349 Table of genes, locations, strands and annotations of subject cluster: ARH98822 3202631 3203197 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC ARH98823 3203194 3203769 + lipopolysaccharide_export,_IM-tethered periplasmic protein of the LptBFGC export complex lptC ARH98824 3203738 3204295 + periplasmic_LPS-binding_protein lptA ARH98825 3204302 3205027 + lipopolysaccharide_export_ABC_transporter ATP-binding protein of the LptBFGC export complex lptB ARH98826 3205075 3206508 + RNA_polymerase,_sigma_54_(sigma_N)_factor rpoN ARH98827 3206531 3206818 + ribosome_hibernation_promoting_factor_HPF hpf ARH98828 3206936 3207427 + sugar-specific_enzyme_IIA_component_of_PTS ptsN ARH98829 3207473 3208327 + adaptor_protein_RapZ_for_GlmZ/GlmY_sRNA_decay yhbJ ARH98830 3208324 3208596 + phosphohistidinoprotein-hexose npr ARH98831 3208810 3209442 + Mg(2+)-starvation-stimulated_protein yrbL ARH98832 3209439 3210167 - biosynthetic_peptidoglycan_transglycosylase mtgA ARH98833 3210164 3210817 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB ARH98834 3211047 3213383 - aerobic_respiration_control_sensor_histidine protein kinase arcB ARH98835 3213479 3214408 - putative_Fe-S_oxidoreductase,_Radical_SAM superfamily protein yhcC ARH98836 3215083 3219543 + glutamate_synthase,_large_subunit gltB ARH98837 3219556 3220974 + glutamate_synthase,_4Fe-4S_protein,_small subunit gltD ARH98838 3221158 3221637 + putative_uncharacterized_protein_YhcG yhcG ARH98839 3221654 3221959 + IS600_orf-like_protein B5762_03343 ARH98840 3222035 3222499 - DUF386_family_protein,_cupin_superfamily yhcH ARH98841 3222496 3223371 - N-acetylmannosamine_kinase nanK ARH98842 3223368 3224057 - putative_N-acetylmannosamine-6-P_epimerase nanE ARH98843 3224105 3225595 - sialic_acid_transporter nanT ARH98844 3225704 3226597 - N-acetylneuraminate_lyase nanA ARH98845 3226719 3227510 - transcriptional_repressor_of_the_nan_operon, induced by sialic acid nanR ARH98846 3227890 3229257 + putative_transporter dcuD ARH98847 3229300 3229797 - ClpXP_protease_specificity_enhancing_factor sspB ARH98848 3229803 3230441 - stringent_starvation_protein_A,_phage_P1_late gene activator sspA ARH98849 3230383 3230592 + hypothetical_protein B5762_03353 ARH98850 3230836 3231228 - 30S_ribosomal_subunit_protein_S9 rpsI ARH98851 3231244 3231672 - 50S_ribosomal_subunit_protein_L13 rplM ARH98852 3231891 3233018 - putative_AFG1-like_family_P-loop_ATPase yhcM ARH98853 3233212 3233610 + putative_uncharacterized_protein_YhcB yhcB ARH98854 3233764 3235131 + serine_endoprotease,_periplasmic degQ ARH98855 3235221 3236288 + serine_endoprotease,_periplasmic degS ARH98856 3236350 3237288 - malate_dehydrogenase,_NAD(P)-binding mdh ARH98857 3237723 3238193 + L-arginine-responsive_arginine_metabolism regulontranscriptional regulator argR ARH98858 3238558 3238821 + cadmium_and_peroxide_resistance_protein, stress-induced yhcN ARH98859 3238877 3239149 - putative_barnase_inhibitor yhcO ARH98860 3239241 3241208 - p-hydroxybenzoic_acid_efflux_system_component aaeB ARH98861 3241214 3242146 - p-hydroxybenzoic_acid_efflux_system_component aaeA ARH98862 3242154 3242357 - DUF1656_family_putative_inner_membrane_efflux pump associated protein aaeX ARH98863 3242540 3243469 + transcriptional_regulator_for_aaeXAB_operon aaeR ARH98864 3243597 3245042 - putative_peptidase tldD ARH98865 3245472 3249272 - DUF3971-AsmA2_domains_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 ARH98840 98 314 100.0 3e-107 PJR32596.1 ARH98841 97 508 100.0 5e-179 PJR32598.1 ARH98843 99 990 100.0 0.0 PJR32600.1 ARH98845 100 537 100.0 0.0 >> 406. CP011938_0 Source: Escherichia coli strain C43(DE3), complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2349 Table of genes, locations, strands and annotations of subject cluster: AKN49070 3189832 3190398 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase TZ57_15820 AKN49071 3190395 3190970 + lipopolysaccharide_transporter TZ57_15825 AKN49072 3190939 3191496 + lipopolysaccharide_transporter TZ57_15830 AKN49073 3191503 3192228 + sugar_ABC_transporter_ATP-binding_protein TZ57_15835 AKN49074 3192276 3193709 + RNA_polymerase_factor_sigma-54 TZ57_15840 AKN49075 3193732 3194019 + ribosome_hibernation_promoting_factor_HPF TZ57_15845 AKN49076 3194137 3194628 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) TZ57_15850 AKN49077 3194674 3195528 + glmZ(sRNA)-inactivating_NTPase TZ57_15855 AKN49078 3195525 3195797 + phosphohistidinoprotein-hexose phosphotransferase TZ57_15860 AKN49079 3196011 3196643 + hypothetical_protein TZ57_15865 AKN49080 3196640 3197368 - peptidoglycan_transglycosylase mtgA AKN49081 3197365 3198018 - isoprenoid_biosynthesis_protein TZ57_15875 AKN49082 3198248 3200584 - aerobic_respiration_control_sensor_protein_ArcB TZ57_15880 AKN50390 3200680 3201609 - hypothetical_protein TZ57_15885 AKN50391 3202284 3206744 + glutamate_synthase gltB AKN49083 3206757 3208175 + glutamate_synthase TZ57_15895 AKN49084 3208855 3209160 + transposase TZ57_15905 AKN49085 3209236 3209700 - hypothetical_protein TZ57_15910 AKN49086 3209697 3210572 - N-acetylmannosamine_kinase TZ57_15915 AKN49087 3210569 3211258 - N-acetylmannosamine-6-phosphate_2-epimerase TZ57_15920 AKN49088 3211306 3212796 - sialic_acid_transporter TZ57_15925 AKN49089 3212905 3213798 - N-acetylneuraminate_lyase TZ57_15930 AKN49090 3213920 3214711 - transcriptional_regulator_NanR TZ57_15935 AKN49091 3215091 3216458 + C4-dicarboxylate_transporter TZ57_15940 AKN49092 3216501 3216998 - Clp_protease_ClpP TZ57_15945 AKN49093 3217004 3217642 - stringent_starvation_protein_A sspA AKN49094 3218037 3218429 - 30S_ribosomal_protein_S9 TZ57_15955 AKN49095 3218445 3218873 - 50S_ribosomal_protein_L13 TZ57_15960 AKN49096 3219092 3220219 - hypothetical_protein TZ57_15965 AKN50392 3220413 3220811 + hypothetical_protein TZ57_15970 AKN49097 3220965 3222332 + serine_endoprotease_DegQ TZ57_15975 AKN49098 3222422 3223489 + serine_endoprotease TZ57_15980 AKN49099 3223551 3224489 - malate_dehydrogenase TZ57_15985 AKN49100 3224924 3225394 + arginine_repressor TZ57_15990 AKN49101 3225759 3226022 + membrane_protein TZ57_15995 AKN49102 3226078 3226350 - hypothetical_protein TZ57_16000 AKN49103 3226442 3228409 - p-hydroxybenzoic_acid_efflux_subunit_AaeB TZ57_16005 AKN49104 3228415 3229347 - p-hydroxybenzoic_acid_efflux_subunit_AaeA TZ57_16010 AKN50393 3229355 3229558 - transporter TZ57_16015 AKN49105 3229741 3230670 + transcriptional_regulator TZ57_16020 AKN49106 3230798 3232243 - protease_TldD tldD AKN49107 3232673 3236473 - hypothetical_protein TZ57_16030 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AKN49085 98 314 100.0 3e-107 PJR32596.1 AKN49086 97 508 100.0 5e-179 PJR32598.1 AKN49088 99 990 100.0 0.0 PJR32600.1 AKN49090 100 537 100.0 0.0 >> 407. CP010137_0 Source: Escherichia coli strain D2, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2349 Table of genes, locations, strands and annotations of subject cluster: APK04775 702743 704188 + protease_TldD tldD APK04776 704316 705245 - transcriptional_regulator RG35_03490 APK08432 705428 705631 + transporter RG35_03495 APK04777 705639 706571 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG35_03500 APK04778 706577 708544 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG35_03505 APK04779 708636 708908 + hypothetical_protein RG35_03510 APK04780 708964 709227 - membrane_protein RG35_03515 APK04781 709592 710062 - arginine_repressor RG35_03520 APK04782 710497 711435 + malate_dehydrogenase RG35_03525 APK04783 711497 712564 - serine_endoprotease RG35_03530 APK04784 712654 714021 - serine_endoprotease_DegQ RG35_03535 APK04785 714175 714573 - hypothetical_protein RG35_03540 APK04786 714767 715894 + hypothetical_protein RG35_03545 APK04787 716113 716541 + 50S_ribosomal_protein_L13 RG35_03550 APK04788 716557 716949 + 30S_ribosomal_protein_S9 RG35_03555 APK04789 717344 717982 + stringent_starvation_protein_A sspA APK04790 717988 718485 + Clp_protease_ClpP RG35_03565 APK04791 718528 719895 - C4-dicarboxylate_transporter RG35_03570 APK04792 720275 721066 + transcriptional_regulator_NanR RG35_03575 APK04793 721188 722081 + N-acetylneuraminate_lyase RG35_03580 APK04794 722190 723680 + sialic_acid_transporter RG35_03585 APK04795 723728 724417 + N-acetylmannosamine-6-phosphate_2-epimerase RG35_03590 APK04796 724414 725289 + N-acetylmannosamine_kinase RG35_03595 APK04797 725286 725750 + hypothetical_protein RG35_03600 APK04798 725826 726131 - transposase RG35_03605 APK04799 726811 728229 - glutamate_synthase RG35_03615 APK08433 728242 732702 - glutamate_synthase gltB APK08434 733377 734306 + hypothetical_protein RG35_03625 APK04800 734402 736738 + aerobic_respiration_control_sensor_protein_ArcB RG35_03630 APK04801 736968 737621 + isoprenoid_biosynthesis_protein RG35_03635 APK04802 737618 738346 + peptidoglycan_transglycosylase mtgA APK04803 738343 738975 - hypothetical_protein RG35_03645 APK04804 739189 739461 - phosphohistidinoprotein-hexose phosphotransferase RG35_03650 APK04805 739458 740312 - glmZ(sRNA)-inactivating_NTPase RG35_03655 APK04806 740358 740849 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG35_03660 APK04807 740967 741254 - ribosome_hibernation_promoting_factor_HPF RG35_03665 APK04808 741277 742710 - RNA_polymerase_factor_sigma-54 RG35_03670 APK04809 742758 743483 - sugar_ABC_transporter_ATP-binding_protein RG35_03675 APK04810 743490 744047 - lipopolysaccharide_transporter RG35_03680 APK04811 744016 744591 - lipopolysaccharide_transporter RG35_03685 APK04812 744588 745154 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG35_03690 APK04813 745175 746161 - D-arabinose_5-phosphate_isomerase RG35_03695 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 APK04797 98 314 100.0 3e-107 PJR32596.1 APK04796 97 508 100.0 5e-179 PJR32598.1 APK04794 99 990 100.0 0.0 PJR32600.1 APK04792 100 537 100.0 0.0 >> 408. AM946981_0 Source: Escherichia coli BL21(DE3), complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2349 Table of genes, locations, strands and annotations of subject cluster: CAQ33531 3210767 3211333 + 3-deoxy-D-manno-octulosonate_8-phosphate kdsC CAQ33532 3211330 3211905 + LptC,_subunit_of_LptABCFG_ABC_transporter lptC CAQ33533 3211874 3212431 + LptA,_subunit_of_LptABCFG_ABC_transporter lptA CAQ33534 3212438 3213163 + LptB,_subunit_of_LptABCFG_ABC_transporter lptB CAQ33535 3213211 3214644 + RNA_polymerase,_sigma_54_(sigma_N)_factor, subunit of RNA polymerase sigma 54 rpoN CAQ33536 3214667 3214954 + predicted_ribosome-associated,_sigma_54 modulation protein hpf CAQ33537 3215072 3215563 + phosphotransferase_system_enzyme_IIA,_regulates N metabolism ptsN CAQ33538 3215609 3216463 + predicted_P-loop_containing_ATPase yhbJ CAQ33539 3216460 3216732 + phosphocarrier_protein_HPr-like_NPr,_nitrogen related, exchanges phosphate with Enzyme I, Hpr npr CAQ33540 3216946 3217578 + predicted_protein yrbL CAQ33541 3217575 3218303 - biosynthetic_peptidoglycan_transglycosylase mtgA CAQ33542 3218300 3218953 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB CAQ33543 3219183 3221519 - ArcB_sensory_histidine_kinase arcB CAQ33544 3221615 3222544 - predicted_Fe-S_oxidoreductase yhcC CAQ33545 3223126 3227679 + glutamate_synthase,_large_subunit,_subunit_of glutamate synthase gltB CAQ33546 3227692 3229110 + glutamate_synthase,_small_subunit,_subunit_of glutamate synthase gltD CAQ33547 3229294 3229773 + predicted_protein yhcG CAQ33548 3229790 3230095 + predicted_IS600_orf-like_protein ybl141 CAQ33549 3230171 3230635 - conserved_protein yhcH CAQ33550 3230632 3231507 - N-acetylmannosamine_kinase nanK CAQ33551 3231504 3232193 - predicted_N-acetylmannosamine-6-phosphate epimerase nanE CAQ33552 3232241 3233731 - NanT_sialic_acid_MFS_transporter nanT CAQ33553 3233840 3234733 - N-acetylneuraminate_lyase nanA CAQ33554 3234855 3235646 - NanR_DNA_binding_transcriptional_dual_regulator nanR CAQ33555 3236026 3237393 + YhcL_DcuC_transporter dcuD CAQ33556 3237436 3237933 - ClpXP_protease_specificity-enhancing_factor sspB CAQ33557 3237939 3238577 - stringent_starvation_protein_A sspA CAQ33558 3238972 3239364 - 30S_ribosomal_subunit_protein_S9,_subunit_of_30S ribosomal subunit and ribosome rpsI CAQ33559 3239380 3239808 - 50S_ribosomal_subunit_protein_L13,_subunit_of 50S ribosomal subunit and ribosome rplM CAQ33560 3240027 3241154 - conserved_protein_with_nucleoside_triphosphate hydrolase domain yhcM CAQ33561 3241348 3241746 + conserved_protein yhcB CAQ33562 3241900 3243267 + serine_endoprotease,_periplasmic degQ CAQ33563 3243357 3244424 + DegS_serine_endoprotease degS CAQ33564 3244486 3245424 - malate_dehydrogenase mdh CAQ33565 3245859 3246329 + ArgR_transcriptional_dual_regulator argR CAQ33566 3246694 3246957 + stress-induced_protein yhcN CAQ33567 3247013 3247285 - predicted_barnase_inhibitor yhcO CAQ33568 3247377 3249344 - AaeAB_Hydroxylated,_Aromatic_Carboxylic_Acid aaeB CAQ33569 3249350 3250282 - AaeAB_Hydroxylated,_Aromatic_Carboxylic_Acid aaeA CAQ33570 3250290 3250493 - hypothetical_protein aaeX CAQ33571 3250676 3251605 + quorum_sensing_transcriptional_regulator_of LYSR-type aaeR CAQ33572 3251733 3253178 - protease_involved_in_Microcin_B17_maturation_and in sensitivity to the DNA gyrase inhibitor LetD tldD CAQ33573 3253608 3257408 - conserved_membrane_protein,_predicted transporter yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 CAQ33549 98 314 100.0 3e-107 PJR32596.1 CAQ33550 97 508 100.0 5e-179 PJR32598.1 CAQ33552 99 990 100.0 0.0 PJR32600.1 CAQ33554 100 537 100.0 0.0 >> 409. LR134234_0 Source: Escherichia coli strain NCTC8623 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2294 Table of genes, locations, strands and annotations of subject cluster: VED20967 2646759 2647325 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC VED20969 2647322 2647897 + putative_organic_solvent_tolerance_protein lptC VED20971 2647866 2648423 + lipopolysaccharide_transport_periplasmic_protein LptA yhbN VED20973 2648430 2649155 + lipopolysaccharide_ABC_transporter lptB VED20975 2649203 2650636 + RNA_polymerase_sigma-54_factor_(sigma-N) rpoN VED20977 2650659 2650946 + putative_sigma(54)_modulation_protein yhbH VED20979 2651064 2651555 + PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN VED20981 2651601 2652455 + putative_ATPase yhbJ VED20983 2652452 2652724 + phosphocarrier_protein ptsO VED20985 2652938 2653570 + protein yrbL VED20987 2653567 2654295 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VED20989 2654292 2654945 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VED20991 2655175 2657511 - aerobic_respiration_control_protein arcB VED20993 2657607 2658536 - putative_radical_SAM_protein NCTC8623_02628 VED20995 2659118 2663671 + glutamate_synthase_subunit_alpha gltB VED20997 2663684 2665102 + glutamate_synthase_(NADPH)_small_subunit gltD_2 VED20999 2665286 2665765 + protein yhcG VED21001 2665782 2666087 + IS600_orf-like_protein NCTC8623_02632 VED21003 2666163 2666627 - beta-galactosidase yhcH VED21005 2666624 2667499 - putative_transcriptional_regulator nanK VED21006 2667496 2668185 - N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VED21008 2668233 2669723 - sialic_acid_transporter nanT VED21010 2669832 2670725 - N-acetylneuraminate_lyase nanA VED21012 2670847 2671638 - GntR_family_transcriptional_regulator nanR VED21014 2672018 2673385 + C4-dicarboxylate_transporter dcuD VED21016 2673428 2673925 - stringent_starvation_protein_B sspB VED21017 2673931 2674569 - stringent_starvation_protein_A sspA VED21019 2674964 2675356 - 30S_ribosomal_protein_S9 rpsI VED21021 2675372 2675800 - 50S_ribosomal_protein_L13 rplM VED21023 2676019 2677146 - putative_ATP/GTP-binding_protein yhcM VED21025 2677340 2677738 + cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VED21027 2677892 2679259 + serine_endoprotease degQ VED21029 2679349 2680416 + protease degS VED21031 2680479 2681417 - malate_dehydrogenase mdh VED21033 2681852 2682322 + arginine_repressor argR VED21035 2682687 2682950 + protein_YcfR ycfR VED21037 2683007 2683279 - barnase_inhibitor yhcO VED21039 2683371 2685338 - p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_2 VED21041 2685344 2686276 - p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VED21043 2686284 2686487 - protein_AaeX aaeX VED21045 2686670 2687599 + LysR_family_transcriptional_regulator aaeR VED21047 2687727 2689172 - TldD_protein tldD VED21049 2689328 2693128 - membrane_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 VED21003 98 311 100.0 7e-106 PJR32597.1 VED21006 99 456 100.0 1e-160 PJR32598.1 VED21008 99 990 100.0 0.0 PJR32600.1 VED21012 100 537 100.0 0.0 >> 410. CP048359_0 Source: Escherichia coli strain 53 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2294 Table of genes, locations, strands and annotations of subject cluster: QHW77145 511544 512989 + metalloprotease_TldD tldD QHW77146 513117 514046 - HTH-type_transcriptional_activator_AaeR aaeR QHW77147 514229 514432 + AaeX_family_protein GZS09_02445 QHW77148 514440 515372 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHW77149 515378 517345 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHW77150 517437 517709 + hypothetical_protein GZS09_02460 QHW77151 517765 518028 - peroxide/acid_stress_response_protein_YhcN yhcN QHW77152 518393 518863 - transcriptional_regulator_ArgR argR QHW77153 519298 520236 + malate_dehydrogenase mdh QHW77154 520299 521366 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QHW77155 521456 522823 - serine_endoprotease_DegQ degQ QHW77156 522977 523375 - DUF1043_family_protein GZS09_02490 QHW77157 523569 524696 + cell_division_protein_ZapE GZS09_02495 QHW77158 524915 525343 + 50S_ribosomal_protein_L13 rplM QHW77159 525359 525751 + 30S_ribosomal_protein_S9 rpsI QHW77160 526146 526784 + stringent_starvation_protein_A sspA QHW77161 526790 527287 + ClpXP_protease_specificity-enhancing_factor sspB QHW77162 527330 528697 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHW77163 529077 529868 + transcriptional_regulator_NanR nanR QHW77164 529990 530883 + N-acetylneuraminate_lyase nanA QHW77165 530992 532482 + sialic_acid_transporter_NanT nanT QHW77166 532530 533219 + N-acetylmannosamine-6-phosphate_2-epimerase GZS09_02540 QHW77167 533216 534091 + N-acetylmannosamine_kinase GZS09_02545 QHW77168 534088 534552 + DUF386_domain-containing_protein GZS09_02550 QHW77169 534628 534933 - transposase GZS09_02555 QHW77170 534950 535429 - DUF1016_family_protein GZS09_02560 QHW77171 535613 537031 - FAD-dependent_oxidoreductase GZS09_02565 QHW80939 537044 541504 - glutamate_synthase_large_subunit gltB QHW77172 542179 543108 + TIGR01212_family_radical_SAM_protein GZS09_02575 QHW77173 543204 545540 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHW77174 545770 546423 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHW77175 546420 547148 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHW77176 547145 547777 - PhoP_regulatory_network_protein_YrbL yrbL QHW77177 547991 548263 - PTS_phosphocarrier_protein_NPr npr QHW77178 548260 549114 - RNase_adapter_RapZ rapZ QHW77179 549160 549651 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHW77180 549769 550056 - ribosome_hibernation_promoting_factor hpf QHW77181 550079 551512 - RNA_polymerase_factor_sigma-54 rpoN QHW77182 551560 552285 - LPS_export_ABC_transporter_ATP-binding_protein lptB QHW77183 552292 552849 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHW77184 552818 553393 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHW77185 553390 553956 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHW77186 553977 554963 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QHW77168 98 311 100.0 7e-106 PJR32597.1 QHW77166 99 456 100.0 1e-160 PJR32598.1 QHW77165 99 990 100.0 0.0 PJR32600.1 QHW77163 100 537 100.0 0.0 >> 411. CP027255_0 Source: Escherichia coli strain EC11 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2294 Table of genes, locations, strands and annotations of subject cluster: AVL08165 1157074 1157640 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC AVL08166 1157637 1158212 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AVL08167 1158181 1158738 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA C6C13_05920 AVL08168 1158745 1159470 + ABC_transporter_ATP-binding_protein C6C13_05925 AVL08169 1159518 1160951 + RNA_polymerase_sigma-54_factor C6C13_05930 AVL08170 1160974 1161261 + ribosome_hibernation_promoting_factor C6C13_05935 AVL08171 1161379 1161870 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN C6C13_05940 AVL08172 1161916 1162770 + RNase_adaptor_protein_RapZ C6C13_05945 AVL08173 1162767 1163039 + phosphocarrier_protein_NPr C6C13_05950 AVL08174 1163253 1163885 + protein_YrbL yrbL AVL08175 1163882 1164610 - monofunctional_biosynthetic_peptidoglycan transglycosylase C6C13_05960 AVL08176 1164607 1165260 - glutamine_amidotransferase C6C13_05965 AVL08177 1165490 1167826 - hybrid_sensor_histidine_kinase/response regulator C6C13_05970 AVL11726 1167922 1168851 - TIGR01212_family_radical_SAM_protein C6C13_05975 AVL08178 1169243 1169479 - hypothetical_protein C6C13_05980 C6C13_05985 1169377 1169603 - hypothetical_protein no_locus_tag AVL08179 1169526 1173986 + glutamate_synthase_large_subunit C6C13_05990 AVL08180 1173999 1175417 + glutamate_synthase_small_subunit C6C13_05995 AVL08181 1175601 1176080 + DUF1016_domain-containing_protein C6C13_06000 AVL08182 1176097 1176402 + transposase C6C13_06005 AVL08183 1176478 1176942 - YhcH/YjgK/YiaL_family_protein C6C13_06010 AVL08184 1176939 1177814 - N-acetylmannosamine_kinase C6C13_06015 AVL08185 1177811 1178500 - N-acetylmannosamine-6-phosphate_2-epimerase C6C13_06020 AVL08186 1178548 1180038 - MFS_transporter C6C13_06025 AVL08187 1180147 1181040 - N-acetylneuraminate_lyase nanA AVL08188 1181162 1181953 - transcriptional_regulator_NanR nanR C6C13_06040 1182223 1182333 - transposase no_locus_tag AVL08189 1182333 1183700 + C4-dicarboxylate_transporter C6C13_06045 AVL08190 1183743 1184240 - stringent_starvation_protein_B C6C13_06050 AVL08191 1184246 1184884 - stringent_starvation_protein_A C6C13_06055 AVL08192 1184826 1185035 + hypothetical_protein C6C13_06060 AVL11727 1184987 1185166 - hypothetical_protein C6C13_06065 AVL08193 1185140 1185361 + hypothetical_protein C6C13_06070 AVL08194 1185279 1185671 - 30S_ribosomal_protein_S9 C6C13_06075 AVL08195 1185687 1186115 - 50S_ribosomal_protein_L13 C6C13_06080 AVL08196 1186334 1187461 - cell_division_protein_ZapE C6C13_06085 AVL08197 1187655 1188053 + hypothetical_protein C6C13_06090 AVL08198 1188207 1189574 + serine_endoprotease_DegQ C6C13_06095 AVL08199 1189664 1190731 + outer_membrane-stress_sensor_serine endopeptidase DegS C6C13_06100 AVL08200 1190794 1191732 - malate_dehydrogenase C6C13_06105 AVL08201 1192167 1192637 + arginine_repressor C6C13_06110 AVL08202 1193002 1193265 + DUF1471_domain-containing_protein C6C13_06115 AVL08203 1193321 1193593 - hypothetical_protein C6C13_06120 AVL08204 1193685 1195652 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB C6C13_06125 AVL08205 1195658 1196590 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA C6C13_06130 AVL08206 1196598 1196801 - protein_AaeX C6C13_06135 AVL08207 1196984 1197913 + HTH-type_transcriptional_activator_AaeR C6C13_06140 AVL08208 1198047 1199492 - metalloprotease_TldD C6C13_06145 AVL08209 1199922 1203722 - AsmA2_domain-containing_protein C6C13_06150 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AVL08183 98 311 100.0 7e-106 PJR32597.1 AVL08185 99 456 100.0 1e-160 PJR32598.1 AVL08186 99 990 100.0 0.0 PJR32600.1 AVL08188 100 537 100.0 0.0 >> 412. CP012781_0 Source: Escherichia coli strain A18 genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2294 Table of genes, locations, strands and annotations of subject cluster: AYL87412 3340100 3340666 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase AOY71_16320 AYL87413 3340663 3341238 + LPS_export_ABC_transporter_periplasmic_protein LptC AOY71_16325 AYL87414 3341207 3341764 + lipopolysaccharide_transporter AOY71_16330 AYL87415 3341771 3342496 + LPS_export_ABC_transporter_ATP-binding_protein AOY71_16335 AYL87416 3342544 3343977 + RNA_polymerase_sigma-54_factor AOY71_16340 AYL87417 3344000 3344287 + hypothetical_protein AOY71_16345 AYL87418 3344405 3344896 + transcriptional_regulator AOY71_16350 AYL87419 3344942 3345796 + glmZ(sRNA)-inactivating_NTPase AOY71_16355 AYL87420 3345793 3346065 + phosphohistidinoprotein-hexose phosphotransferase AOY71_16360 AYL87421 3346279 3346911 + hypothetical_protein AOY71_16365 AYL87422 3346908 3347636 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AYL87423 3347633 3348286 - isoprenoid_biosynthesis_protein AOY71_16375 AYL87424 3348516 3350852 - aerobic_respiration_control_sensor_protein_ArcB AOY71_16380 AYL88716 3350948 3351877 - radical_SAM_protein AOY71_16385 AYL88717 3352552 3357012 + glutamate_synthase gltB AYL87425 3357025 3358443 + glutamate_synthase AOY71_16395 AOY71_16400 3358627 3359031 + hypothetical_protein no_locus_tag AYL87426 3359123 3359428 + transposase AOY71_16405 AYL87427 3359504 3359968 - hypothetical_protein AOY71_16410 AYL87428 3359965 3360840 - N-acetylmannosamine_kinase AOY71_16415 AYL87429 3360837 3361526 - N-acetylmannosamine-6-phosphate_2-epimerase AOY71_16420 AYL87430 3361574 3363064 - sialic_acid_transporter AOY71_16425 AYL87431 3363173 3364066 - N-acetylneuraminate_lyase AOY71_16430 AYL87432 3364188 3364979 - transcriptional_regulator_NanR AOY71_16435 AYL87433 3365359 3366726 + C4-dicarboxylate_transporter AOY71_16440 AYL87434 3366769 3367266 - Clp_protease_ClpP AOY71_16445 AYL87435 3367272 3367910 - stringent_starvation_protein_A sspA AYL87436 3368305 3368697 - 30S_ribosomal_protein_S9 AOY71_16455 AYL87437 3368713 3369141 - 50S_ribosomal_protein_L13 AOY71_16460 AYL87438 3369360 3370487 - hypothetical_protein AOY71_16465 AYL87439 3370681 3371079 + hypothetical_protein AOY71_16470 AYL87440 3371233 3372600 + serine_endoprotease_DegQ AOY71_16475 AYL87441 3372690 3373757 + serine_endoprotease AOY71_16480 AYL87442 3373820 3374758 - malate_dehydrogenase AOY71_16485 AYL87443 3375193 3375663 + arginine_repressor AOY71_16490 AYL87444 3376028 3376291 + hypothetical_protein AOY71_16495 AYL87445 3376347 3376619 - hypothetical_protein AOY71_16500 AYL87446 3376711 3378678 - p-hydroxybenzoic_acid_efflux_subunit_AaeB AOY71_16505 AYL87447 3378684 3379616 - p-hydroxybenzoic_acid_efflux_subunit_AaeA AOY71_16510 AYL88718 3379624 3379827 - transporter AOY71_16515 AYL87448 3380010 3380939 + transcriptional_regulator AOY71_16520 AYL87449 3381073 3382518 - protease_TldD tldD AYL87450 3382948 3386748 - hypothetical_protein AOY71_16530 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AYL87427 98 311 100.0 7e-106 PJR32597.1 AYL87429 99 456 100.0 1e-160 PJR32598.1 AYL87430 99 990 100.0 0.0 PJR32600.1 AYL87432 100 537 100.0 0.0 >> 413. CP010221_0 Source: Escherichia coli strain M19, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2294 Table of genes, locations, strands and annotations of subject cluster: APL40389 4795218 4796663 + protease_TldD tldD APL40390 4796797 4797726 - transcriptional_regulator RG63_23600 APL40893 4797909 4798112 + transporter RG63_23605 APL40391 4798120 4799052 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG63_23610 APL40392 4799058 4801025 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG63_23615 APL40393 4801117 4801389 + hypothetical_protein RG63_23620 APL40394 4801445 4801708 - membrane_protein RG63_23625 APL40395 4802073 4802543 - arginine_repressor RG63_23630 APL40396 4802978 4803916 + malate_dehydrogenase RG63_23635 APL40397 4803979 4805046 - serine_endoprotease RG63_23640 APL40398 4805136 4806503 - serine_endoprotease_DegQ RG63_23645 APL40399 4806657 4807055 - hypothetical_protein RG63_23650 APL40400 4807249 4808376 + hypothetical_protein RG63_23655 APL40401 4808595 4809023 + 50S_ribosomal_protein_L13 RG63_23660 APL40402 4809039 4809431 + 30S_ribosomal_protein_S9 RG63_23665 APL40403 4809826 4810464 + stringent_starvation_protein_A sspA APL40404 4810470 4810967 + Clp_protease_ClpP RG63_23675 APL40405 4811010 4812377 - C4-dicarboxylate_transporter RG63_23680 APL40406 4812757 4813548 + transcriptional_regulator_NanR RG63_23685 APL40407 4813670 4814563 + N-acetylneuraminate_lyase RG63_23690 APL40408 4814672 4816162 + sialic_acid_transporter RG63_23695 APL40409 4816210 4816899 + N-acetylmannosamine-6-phosphate_2-epimerase RG63_23700 APL40410 4816896 4817771 + N-acetylmannosamine_kinase RG63_23705 APL40411 4817768 4818232 + hypothetical_protein RG63_23710 APL40412 4818308 4818613 - transposase RG63_23715 APL40413 4819293 4820711 - glutamate_synthase RG63_23725 APL40894 4820724 4825184 - glutamate_synthase gltB APL40895 4825859 4826788 + hypothetical_protein RG63_23735 APL40414 4826884 4829220 + aerobic_respiration_control_sensor_protein_ArcB RG63_23740 APL40415 4829450 4830103 + isoprenoid_biosynthesis_protein RG63_23745 APL40416 4830100 4830828 + peptidoglycan_transglycosylase mtgA APL40417 4830825 4831457 - hypothetical_protein RG63_23755 APL40418 4831671 4831943 - phosphohistidinoprotein-hexose phosphotransferase RG63_23760 APL40419 4831940 4832794 - glmZ(sRNA)-inactivating_NTPase RG63_23765 APL40420 4832840 4833331 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG63_23770 APL40421 4833449 4833736 - ribosome_hibernation_promoting_factor_HPF RG63_23775 APL40422 4833759 4835192 - RNA_polymerase_factor_sigma-54 RG63_23780 APL40423 4835240 4835965 - sugar_ABC_transporter_ATP-binding_protein RG63_23785 APL40424 4835972 4836529 - lipopolysaccharide_transporter RG63_23790 APL40425 4836498 4837073 - lipopolysaccharide_transporter RG63_23795 APL40426 4837070 4837636 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG63_23800 APL40427 4837657 4838643 - D-arabinose_5-phosphate_isomerase RG63_23805 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 APL40411 98 311 100.0 7e-106 PJR32597.1 APL40409 99 456 100.0 1e-160 PJR32598.1 APL40408 99 990 100.0 0.0 PJR32600.1 APL40406 100 537 100.0 0.0 >> 414. CP010213_0 Source: Escherichia coli strain M15, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2294 Table of genes, locations, strands and annotations of subject cluster: APL26708 485084 486529 + protease_TldD tldD APL26709 486663 487592 - transcriptional_regulator RG61_02410 APL26710 487775 487978 + transporter RG61_02415 APL26711 487986 488918 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG61_02420 APL26712 488924 490891 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG61_02425 APL26713 490983 491255 + hypothetical_protein RG61_02430 APL26714 491311 491574 - membrane_protein RG61_02435 APL26715 491939 492409 - arginine_repressor RG61_02440 APL26716 492844 493782 + malate_dehydrogenase RG61_02445 APL26717 493845 494912 - serine_endoprotease RG61_02450 APL26718 495002 496369 - serine_endoprotease_DegQ RG61_02455 APL26719 496523 496921 - hypothetical_protein RG61_02460 APL26720 497115 498242 + hypothetical_protein RG61_02465 APL26721 498461 498889 + 50S_ribosomal_protein_L13 RG61_02470 APL26722 498905 499297 + 30S_ribosomal_protein_S9 RG61_02475 APL26723 499692 500330 + stringent_starvation_protein_A sspA APL26724 500336 500833 + Clp_protease_ClpP RG61_02485 APL26725 500876 502243 - C4-dicarboxylate_transporter RG61_02490 APL26726 502623 503414 + transcriptional_regulator_NanR RG61_02495 APL26727 503536 504429 + N-acetylneuraminate_lyase RG61_02500 APL26728 504538 506028 + sialic_acid_transporter RG61_02505 APL26729 506076 506765 + N-acetylmannosamine-6-phosphate_2-epimerase RG61_02510 APL26730 506762 507637 + N-acetylmannosamine_kinase RG61_02515 APL26731 507634 508098 + hypothetical_protein RG61_02520 APL26732 508174 508479 - transposase RG61_02525 APL26733 509159 510577 - glutamate_synthase RG61_02535 APL26734 510590 515050 - glutamate_synthase gltB APL26735 515725 516654 + hypothetical_protein RG61_02545 APL26736 516750 519086 + aerobic_respiration_control_sensor_protein_ArcB RG61_02550 APL26737 519316 519969 + isoprenoid_biosynthesis_protein RG61_02555 APL26738 519966 520694 + peptidoglycan_transglycosylase mtgA APL26739 520691 521323 - hypothetical_protein RG61_02565 APL26740 521537 521809 - phosphohistidinoprotein-hexose phosphotransferase RG61_02570 APL26741 521806 522660 - glmZ(sRNA)-inactivating_NTPase RG61_02575 APL26742 522706 523197 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG61_02580 APL26743 523315 523602 - ribosome_hibernation_promoting_factor_HPF RG61_02585 APL26744 523625 525058 - RNA_polymerase_factor_sigma-54 RG61_02590 APL26745 525106 525831 - sugar_ABC_transporter_ATP-binding_protein RG61_02595 APL26746 525838 526395 - lipopolysaccharide_transporter RG61_02600 APL26747 526364 526939 - lipopolysaccharide_transporter RG61_02605 APL26748 526936 527502 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG61_02610 APL26749 527523 528509 - D-arabinose_5-phosphate_isomerase RG61_02615 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 APL26731 98 311 100.0 7e-106 PJR32597.1 APL26729 99 456 100.0 1e-160 PJR32598.1 APL26728 99 990 100.0 0.0 PJR32600.1 APL26726 100 537 100.0 0.0 >> 415. CP010206_0 Source: Escherichia coli strain M11, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2294 Table of genes, locations, strands and annotations of subject cluster: APL25499 4734903 4736348 + protease_TldD tldD APL25500 4736482 4737411 - transcriptional_regulator RG60_23385 APL25989 4737594 4737797 + transporter RG60_23390 APL25501 4737805 4738737 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG60_23395 APL25502 4738743 4740710 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG60_23400 APL25503 4740802 4741074 + hypothetical_protein RG60_23405 APL25504 4741130 4741393 - membrane_protein RG60_23410 APL25505 4741758 4742228 - arginine_repressor RG60_23415 APL25506 4742663 4743601 + malate_dehydrogenase RG60_23420 APL25507 4743664 4744731 - serine_endoprotease RG60_23425 APL25508 4744821 4746188 - serine_endoprotease_DegQ RG60_23430 APL25509 4746342 4746740 - hypothetical_protein RG60_23435 APL25510 4746934 4748061 + hypothetical_protein RG60_23440 APL25511 4748280 4748708 + 50S_ribosomal_protein_L13 RG60_23445 APL25512 4748724 4749116 + 30S_ribosomal_protein_S9 RG60_23450 APL25513 4749511 4750149 + stringent_starvation_protein_A sspA APL25514 4750155 4750652 + Clp_protease_ClpP RG60_23460 APL25515 4750695 4752062 - C4-dicarboxylate_transporter RG60_23465 APL25516 4752442 4753233 + transcriptional_regulator_NanR RG60_23470 APL25517 4753355 4754248 + N-acetylneuraminate_lyase RG60_23475 APL25518 4754357 4755847 + sialic_acid_transporter RG60_23480 APL25519 4755895 4756584 + N-acetylmannosamine-6-phosphate_2-epimerase RG60_23485 APL25520 4756581 4757456 + N-acetylmannosamine_kinase RG60_23490 APL25521 4757453 4757917 + hypothetical_protein RG60_23495 APL25522 4757993 4758298 - transposase RG60_23500 APL25523 4758978 4760396 - glutamate_synthase RG60_23510 APL25990 4760409 4764869 - glutamate_synthase gltB APL25991 4765544 4766473 + hypothetical_protein RG60_23520 APL25524 4766569 4768905 + aerobic_respiration_control_sensor_protein_ArcB RG60_23525 APL25525 4769135 4769788 + isoprenoid_biosynthesis_protein RG60_23530 APL25526 4769785 4770513 + peptidoglycan_transglycosylase mtgA APL25527 4770510 4771142 - hypothetical_protein RG60_23540 APL25528 4771356 4771628 - phosphohistidinoprotein-hexose phosphotransferase RG60_23545 APL25529 4771625 4772479 - glmZ(sRNA)-inactivating_NTPase RG60_23550 APL25530 4772525 4773016 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG60_23555 APL25531 4773134 4773421 - ribosome_hibernation_promoting_factor_HPF RG60_23560 APL25532 4773444 4774877 - RNA_polymerase_factor_sigma-54 RG60_23565 APL25533 4774925 4775650 - sugar_ABC_transporter_ATP-binding_protein RG60_23570 APL25534 4775657 4776214 - lipopolysaccharide_transporter RG60_23575 APL25535 4776183 4776758 - lipopolysaccharide_transporter RG60_23580 APL25536 4776755 4777321 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG60_23585 APL25537 4777342 4778328 - D-arabinose_5-phosphate_isomerase RG60_23590 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 APL25521 98 311 100.0 7e-106 PJR32597.1 APL25519 99 456 100.0 1e-160 PJR32598.1 APL25518 99 990 100.0 0.0 PJR32600.1 APL25516 100 537 100.0 0.0 >> 416. CP010200_0 Source: Escherichia coli strain M10, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2294 Table of genes, locations, strands and annotations of subject cluster: APL18334 1902922 1903488 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG59_09525 APL18335 1903485 1904060 + lipopolysaccharide_transporter RG59_09530 APL18336 1904029 1904586 + lipopolysaccharide_transporter RG59_09535 APL18337 1904593 1905318 + sugar_ABC_transporter_ATP-binding_protein RG59_09540 APL18338 1905366 1906799 + RNA_polymerase_factor_sigma-54 RG59_09545 APL18339 1906822 1907109 + ribosome_hibernation_promoting_factor_HPF RG59_09550 APL18340 1907227 1907718 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG59_09555 APL18341 1907764 1908618 + glmZ(sRNA)-inactivating_NTPase RG59_09560 APL18342 1908615 1908887 + phosphohistidinoprotein-hexose phosphotransferase RG59_09565 APL18343 1909101 1909733 + hypothetical_protein RG59_09570 APL18344 1909730 1910458 - peptidoglycan_transglycosylase mtgA APL18345 1910455 1911108 - isoprenoid_biosynthesis_protein RG59_09580 APL18346 1911338 1913674 - aerobic_respiration_control_sensor_protein_ArcB RG59_09585 APL21058 1913770 1914699 - hypothetical_protein RG59_09590 APL21059 1915374 1919834 + glutamate_synthase gltB APL18347 1919847 1921265 + glutamate_synthase RG59_09600 APL18348 1921945 1922250 + transposase RG59_09610 APL18349 1922326 1922790 - hypothetical_protein RG59_09615 APL18350 1922787 1923662 - N-acetylmannosamine_kinase RG59_09620 APL18351 1923659 1924348 - N-acetylmannosamine-6-phosphate_2-epimerase RG59_09625 APL18352 1924396 1925886 - sialic_acid_transporter RG59_09630 APL18353 1925995 1926888 - N-acetylneuraminate_lyase RG59_09635 APL18354 1927010 1927801 - transcriptional_regulator_NanR RG59_09640 APL18355 1928181 1929548 + C4-dicarboxylate_transporter RG59_09645 APL18356 1929591 1930088 - Clp_protease_ClpP RG59_09650 APL18357 1930094 1930732 - stringent_starvation_protein_A sspA APL18358 1931127 1931519 - 30S_ribosomal_protein_S9 RG59_09660 APL18359 1931535 1931963 - 50S_ribosomal_protein_L13 RG59_09665 APL18360 1932182 1933309 - hypothetical_protein RG59_09670 APL18361 1933503 1933901 + hypothetical_protein RG59_09675 APL18362 1934055 1935422 + serine_endoprotease_DegQ RG59_09680 APL18363 1935512 1936579 + serine_endoprotease RG59_09685 APL18364 1936642 1937580 - malate_dehydrogenase RG59_09690 APL18365 1938015 1938485 + arginine_repressor RG59_09695 APL18366 1938850 1939113 + membrane_protein RG59_09700 APL18367 1939169 1939441 - hypothetical_protein RG59_09705 APL18368 1939533 1941500 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG59_09710 APL18369 1941506 1942438 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG59_09715 APL21060 1942446 1942649 - transporter RG59_09720 APL18370 1942832 1943761 + transcriptional_regulator RG59_09725 APL18371 1943889 1945334 - protease_TldD tldD APL18372 1945490 1949290 - hypothetical_protein RG59_09735 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 APL18349 98 311 100.0 7e-106 PJR32597.1 APL18351 99 456 100.0 1e-160 PJR32598.1 APL18352 99 990 100.0 0.0 PJR32600.1 APL18354 100 537 100.0 0.0 >> 417. CP010196_0 Source: Escherichia coli strain M9, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2294 Table of genes, locations, strands and annotations of subject cluster: APL14708 3469865 3470431 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG58_17205 APL14709 3470428 3471003 + lipopolysaccharide_transporter RG58_17210 APL14710 3470972 3471529 + lipopolysaccharide_transporter RG58_17215 APL14711 3471536 3472261 + sugar_ABC_transporter_ATP-binding_protein RG58_17220 APL14712 3472309 3473742 + RNA_polymerase_factor_sigma-54 RG58_17225 APL14713 3473765 3474052 + ribosome_hibernation_promoting_factor_HPF RG58_17230 APL14714 3474170 3474661 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG58_17235 APL14715 3474707 3475561 + glmZ(sRNA)-inactivating_NTPase RG58_17240 APL14716 3475558 3475830 + phosphohistidinoprotein-hexose phosphotransferase RG58_17245 APL14717 3476044 3476676 + hypothetical_protein RG58_17250 APL14718 3476673 3477401 - peptidoglycan_transglycosylase mtgA APL14719 3477398 3478051 - isoprenoid_biosynthesis_protein RG58_17260 APL14720 3478281 3480617 - aerobic_respiration_control_sensor_protein_ArcB RG58_17265 APL16365 3480713 3481642 - hypothetical_protein RG58_17270 APL16366 3482317 3486777 + glutamate_synthase gltB APL14721 3486790 3488208 + glutamate_synthase RG58_17280 APL14722 3488888 3489193 + transposase RG58_17290 APL14723 3489269 3489733 - hypothetical_protein RG58_17295 APL14724 3489730 3490605 - N-acetylmannosamine_kinase RG58_17300 APL14725 3490602 3491291 - N-acetylmannosamine-6-phosphate_2-epimerase RG58_17305 APL14726 3491339 3492829 - sialic_acid_transporter RG58_17310 APL14727 3492938 3493831 - N-acetylneuraminate_lyase RG58_17315 APL14728 3493953 3494744 - transcriptional_regulator_NanR RG58_17320 APL14729 3495124 3496491 + C4-dicarboxylate_transporter RG58_17325 APL14730 3496534 3497031 - Clp_protease_ClpP RG58_17330 APL14731 3497037 3497675 - stringent_starvation_protein_A sspA APL14732 3498070 3498462 - 30S_ribosomal_protein_S9 RG58_17340 APL14733 3498478 3498906 - 50S_ribosomal_protein_L13 RG58_17345 APL14734 3499125 3500252 - hypothetical_protein RG58_17350 APL14735 3500446 3500844 + hypothetical_protein RG58_17355 APL14736 3500998 3502365 + serine_endoprotease_DegQ RG58_17360 APL14737 3502455 3503522 + serine_endoprotease RG58_17365 APL14738 3503585 3504523 - malate_dehydrogenase RG58_17370 APL14739 3504958 3505428 + arginine_repressor RG58_17375 APL14740 3505793 3506056 + membrane_protein RG58_17380 APL14741 3506112 3506384 - hypothetical_protein RG58_17385 APL14742 3506476 3508443 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG58_17390 APL14743 3508449 3509381 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG58_17395 APL16367 3509389 3509592 - transporter RG58_17400 APL14744 3509775 3510704 + transcriptional_regulator RG58_17405 APL14745 3510838 3512283 - protease_TldD tldD APL14746 3512713 3516513 - hypothetical_protein RG58_17415 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 APL14723 98 311 100.0 7e-106 PJR32597.1 APL14725 99 456 100.0 1e-160 PJR32598.1 APL14726 99 990 100.0 0.0 PJR32600.1 APL14728 100 537 100.0 0.0 >> 418. CP010186_0 Source: Escherichia coli strain M6, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2294 Table of genes, locations, strands and annotations of subject cluster: APL04925 3470546 3471112 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG56_17225 APL04926 3471109 3471684 + lipopolysaccharide_transporter RG56_17230 APL04927 3471653 3472210 + lipopolysaccharide_transporter RG56_17235 APL04928 3472217 3472942 + sugar_ABC_transporter_ATP-binding_protein RG56_17240 APL04929 3472990 3474423 + RNA_polymerase_factor_sigma-54 RG56_17245 APL04930 3474446 3474733 + ribosome_hibernation_promoting_factor_HPF RG56_17250 APL04931 3474851 3475342 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG56_17255 APL04932 3475388 3476242 + glmZ(sRNA)-inactivating_NTPase RG56_17260 APL04933 3476239 3476511 + phosphohistidinoprotein-hexose phosphotransferase RG56_17265 APL04934 3476725 3477357 + hypothetical_protein RG56_17270 APL04935 3477354 3478082 - peptidoglycan_transglycosylase mtgA APL04936 3478079 3478732 - isoprenoid_biosynthesis_protein RG56_17280 APL04937 3478962 3481298 - aerobic_respiration_control_sensor_protein_ArcB RG56_17285 APL06590 3481394 3482323 - hypothetical_protein RG56_17290 APL06591 3482998 3487458 + glutamate_synthase gltB APL04938 3487471 3488889 + glutamate_synthase RG56_17300 APL04939 3489569 3489874 + transposase RG56_17310 APL04940 3489950 3490414 - hypothetical_protein RG56_17315 APL04941 3490411 3491286 - N-acetylmannosamine_kinase RG56_17320 APL04942 3491283 3491972 - N-acetylmannosamine-6-phosphate_2-epimerase RG56_17325 APL04943 3492020 3493510 - sialic_acid_transporter RG56_17330 APL04944 3493619 3494512 - N-acetylneuraminate_lyase RG56_17335 APL04945 3494634 3495425 - transcriptional_regulator_NanR RG56_17340 APL04946 3495805 3497172 + C4-dicarboxylate_transporter RG56_17345 APL04947 3497215 3497712 - Clp_protease_ClpP RG56_17350 APL04948 3497718 3498356 - stringent_starvation_protein_A sspA APL04949 3498751 3499143 - 30S_ribosomal_protein_S9 RG56_17360 APL04950 3499159 3499587 - 50S_ribosomal_protein_L13 RG56_17365 APL04951 3499806 3500933 - hypothetical_protein RG56_17370 APL04952 3501127 3501525 + hypothetical_protein RG56_17375 APL04953 3501679 3503046 + serine_endoprotease_DegQ RG56_17380 APL04954 3503136 3504203 + serine_endoprotease RG56_17385 APL04955 3504266 3505204 - malate_dehydrogenase RG56_17390 APL04956 3505639 3506109 + arginine_repressor RG56_17395 APL04957 3506474 3506737 + membrane_protein RG56_17400 APL04958 3506793 3507065 - hypothetical_protein RG56_17405 APL04959 3507157 3509124 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG56_17410 APL04960 3509130 3510062 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG56_17415 APL06592 3510070 3510273 - transporter RG56_17420 APL04961 3510456 3511385 + transcriptional_regulator RG56_17425 APL04962 3511519 3512964 - protease_TldD tldD APL04963 3513394 3517194 - hypothetical_protein RG56_17435 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 APL04940 98 311 100.0 7e-106 PJR32597.1 APL04942 99 456 100.0 1e-160 PJR32598.1 APL04943 99 990 100.0 0.0 PJR32600.1 APL04945 100 537 100.0 0.0 >> 419. CP010178_0 Source: Escherichia coli strain H15, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2294 Table of genes, locations, strands and annotations of subject cluster: APK90418 3188078 3188644 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG53_15705 APK90419 3188641 3189216 + lipopolysaccharide_transporter RG53_15710 APK90420 3189185 3189742 + lipopolysaccharide_transporter RG53_15715 APK90421 3189749 3190474 + sugar_ABC_transporter_ATP-binding_protein RG53_15720 APK90422 3190522 3191955 + RNA_polymerase_factor_sigma-54 RG53_15725 APK90423 3191978 3192265 + ribosome_hibernation_promoting_factor_HPF RG53_15730 APK90424 3192383 3192874 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG53_15735 APK90425 3192920 3193774 + glmZ(sRNA)-inactivating_NTPase RG53_15740 APK90426 3193771 3194043 + phosphohistidinoprotein-hexose phosphotransferase RG53_15745 APK90427 3194257 3194889 + hypothetical_protein RG53_15750 APK90428 3194886 3195614 - peptidoglycan_transglycosylase mtgA APK90429 3195611 3196264 - isoprenoid_biosynthesis_protein RG53_15760 APK90430 3196494 3198830 - aerobic_respiration_control_sensor_protein_ArcB RG53_15765 APK91935 3198926 3199855 - hypothetical_protein RG53_15770 APK91936 3200530 3204990 + glutamate_synthase gltB APK90431 3205003 3206421 + glutamate_synthase RG53_15780 APK90432 3207101 3207406 + transposase RG53_15790 APK90433 3207482 3207946 - hypothetical_protein RG53_15795 APK90434 3207943 3208818 - N-acetylmannosamine_kinase RG53_15800 APK90435 3208815 3209504 - N-acetylmannosamine-6-phosphate_2-epimerase RG53_15805 APK90436 3209552 3211042 - sialic_acid_transporter RG53_15810 APK90437 3211151 3212044 - N-acetylneuraminate_lyase RG53_15815 APK90438 3212166 3212957 - transcriptional_regulator_NanR RG53_15820 APK90439 3213337 3214704 + C4-dicarboxylate_transporter RG53_15825 APK90440 3214747 3215244 - Clp_protease_ClpP RG53_15830 APK90441 3215250 3215888 - stringent_starvation_protein_A sspA APK90442 3216283 3216675 - 30S_ribosomal_protein_S9 RG53_15840 APK90443 3216691 3217119 - 50S_ribosomal_protein_L13 RG53_15845 APK90444 3217338 3218465 - hypothetical_protein RG53_15850 APK90445 3218659 3219057 + hypothetical_protein RG53_15855 APK90446 3219211 3220578 + serine_endoprotease_DegQ RG53_15860 APK90447 3220668 3221735 + serine_endoprotease RG53_15865 APK90448 3221797 3222735 - malate_dehydrogenase RG53_15870 APK90449 3223170 3223640 + arginine_repressor RG53_15875 APK90450 3224005 3224268 + membrane_protein RG53_15880 APK90451 3224324 3224596 - hypothetical_protein RG53_15885 APK90452 3224688 3226655 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG53_15890 APK90453 3226661 3227593 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG53_15895 APK91937 3227601 3227804 - transporter RG53_15900 APK90454 3227987 3228916 + transcriptional_regulator RG53_15905 APK90455 3229044 3230489 - protease_TldD tldD APK90456 3230645 3234445 - hypothetical_protein RG53_15915 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 APK90433 98 311 100.0 7e-106 PJR32597.1 APK90435 99 456 100.0 1e-160 PJR32598.1 APK90436 99 990 100.0 0.0 PJR32600.1 APK90438 100 537 100.0 0.0 >> 420. CP043757_0 Source: Escherichia coli strain CVM N55972 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2287 Table of genes, locations, strands and annotations of subject cluster: QEP87261 522930 524375 + metalloprotease_TldD tldD QEP87262 524509 525438 - HTH-type_transcriptional_activator_AaeR aaeR QEP87263 525621 525824 + DUF1656_domain-containing_protein F1L16_02510 QEP87264 525832 526764 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QEP87265 526770 528737 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QEP87266 528829 529101 + hypothetical_protein F1L16_02525 QEP87267 529157 529420 - peroxide/acid_stress_response_protein_YhcN yhcN QEP87268 529785 530255 - transcriptional_regulator_ArgR argR QEP87269 530690 531628 + malate_dehydrogenase mdh QEP87270 531691 532758 - serine_endoprotease_DegS F1L16_02545 QEP87271 532848 534215 - serine_endoprotease_DegQ degQ QEP87272 534369 534767 - DUF1043_family_protein F1L16_02555 QEP87273 534961 536088 + cell_division_protein_ZapE F1L16_02560 QEP87274 536307 536735 + 50S_ribosomal_protein_L13 rplM QEP87275 536751 537143 + 30S_ribosomal_protein_S9 rpsI QEP87276 537538 538176 + stringent_starvation_protein_A sspA QEP87277 538182 538679 + ClpXP_protease_specificity-enhancing_factor sspB QEP87278 538722 540089 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QEP87279 540469 541260 + transcriptional_regulator_NanR nanR QEP87280 541382 542275 + N-acetylneuraminate_lyase nanA QEP87281 542384 543874 + sialic_acid_transporter_NanT nanT QEP87282 543922 544611 + N-acetylmannosamine-6-phosphate_2-epimerase F1L16_02605 QEP87283 544608 545483 + N-acetylmannosamine_kinase F1L16_02610 QEP87284 545480 545944 + DUF386_domain-containing_protein F1L16_02615 QEP87285 546004 547131 - DUF1016_domain-containing_protein F1L16_02620 QEP87286 547316 548032 - DUF1120_domain-containing_protein F1L16_02625 QEP87287 548029 548574 - hypothetical_protein F1L16_02630 QEP87288 548571 550952 - fimbrial_biogenesis_outer_membrane_usher protein F1L16_02635 QEP87289 550973 551647 - fimbria/pilus_periplasmic_chaperone F1L16_02640 QEP87290 551819 552583 - DUF1120_domain-containing_protein F1L16_02645 QEP87291 553143 554561 - glutamate_synthase F1L16_02650 QEP90976 554574 559034 - glutamate_synthase_large_subunit gltB QEP87292 559709 560638 + TIGR01212_family_radical_SAM_protein F1L16_02660 QEP87293 560734 563070 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QEP87294 563300 563953 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QEP87295 563950 564678 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QEP87296 564675 565307 - PhoP_regulatory_network_protein_YrbL yrbL QEP87297 565521 565793 - PTS_phosphocarrier_protein_NPr npr QEP87298 565790 566644 - RNase_adapter_RapZ rapZ QEP87299 566690 567181 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QEP87285 90 684 107.449856734 0.0 PJR32597.1 QEP87282 99 456 100.0 1e-160 PJR32599.1 QEP87280 100 611 100.0 0.0 PJR32600.1 QEP87279 99 536 100.0 0.0 >> 421. LN832404_0 Source: Escherichia coli K-12 genome assembly EcoliK12AG100, chromosome : I. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: CQR82631 3344478 3344750 + phosphohistidinoprotein-hexose npr CQR82632 3344964 3345596 + hypothetical_protein yrbL CQR82633 3345593 3346321 - biosynthetic_peptidoglycan_transglycosylase mtgA CQR82634 3346318 3346971 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB CQR82635 3347201 3349537 - aerobic_respiration_control_sensor_histidine arcB CQR82636 3349633 3350562 - putative_Fe-S_oxidoreductase yhcC CQR82637 3351237 3355697 + glutamate_synthase,_large_subunit gltB CQR82638 3355710 3357128 + glutamate_synthase,_4Fe-4S_protein,_small subunit gltD CQR82639 3357688 3358452 + periplasmic_protein gltF CQR82640 3358624 3359298 + putative_periplasmic_chaperone_protein yhcA CQR82641 3359319 3361700 + putative_outer_membrane_mbrial_subunitusher protein yhcD CQR82643 3362214 3363230 - IS5_transposase_and_trans-activator insH1 CQR82644 3363438 3364154 + putative_transcriptional_regulator yhcF CQR82645 3364339 3365466 + hypothetical_protein yhcG CQR82646 3365526 3365990 - hypothetical_protein yhcH CQR82647 3365987 3366862 - N-acetylmannosamine_kinase nanK CQR82648 3366859 3367548 - putative_N-acetylmannosamine-6-P_epimerase nanE CQR82649 3367596 3369086 - sialic_acid_transporter nanT CQR82650 3369195 3370088 - N-acetylneuraminate_lyase nanA CQR82651 3370210 3371001 - DNA-binding_transcriptional_repressor_of_the_nan operon, induced by sialic acid nanR CQR82652 3371381 3372748 + putative_transporter dcuD CQR82653 3372791 3373288 - ClpXP_protease_specificity_enhancing_factor sspB CQR82654 3373294 3373932 - stringent_starvation_protein_A sspA CQR82655 3374327 3374719 - 30S_ribosomal_subunit_protein_S9 rpsI CQR82656 3374735 3375163 - 50S_ribosomal_subunit_protein_L13 rplM CQR82657 3375382 3376509 - conserved_protein_with_nucleoside_triphosphate hydrolase domain yhcM CQR82658 3377255 3378622 + serine_endoprotease,_periplasmic degQ CQR82659 3378712 3379779 + serine_endoprotease,_periplasmic degS CQR82660 3379842 3380780 - malate_dehydrogenase,_NAD(P)-binding mdh CQR82661 3381215 3381685 + DNA-binding_transcriptional_dual_regulator, L-arginine-binding argR CQR82662 3382050 3382313 + hypothetical_protein yhcN CQR82663 3382369 3382641 - putative_barnase_inhibitor yhcO CQR82664 3382733 3384700 - p-hydroxybenzoic_acid_efflux_system_component aaeB CQR82665 3384706 3385638 - p-hydroxybenzoic_acid_efflux_system_component aaeA CQR82666 3385646 3385849 - membrane_protein_of_efflux_system aaeX CQR82667 3386032 3386961 + transcriptional_regulator_for_aaeXAB_operon aaeR CQR82668 3387095 3388540 - putative_peptidase tldD CQR82669 3388970 3392770 - conserved_membrane_protein,_predicted transporter yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 CQR82645 90 682 107.449856734 0.0 PJR32597.1 CQR82648 99 456 100.0 1e-160 PJR32599.1 CQR82650 100 611 100.0 0.0 PJR32600.1 CQR82651 99 536 100.0 0.0 >> 422. LM995446_0 Source: Escherichia coli genome assembly EcRV308Chr, chromosome : 1. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: CDZ21989 3291605 3292333 - biosynthetic_peptidoglycan_transglycosylase mtgA CDZ21990 3292330 3292983 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB CDZ21991 3293103 3293800 - InsAB'_transposase insAB-n2 CDZ21992 3293103 3293606 - IS1_protein_InsB insB-n2 CDZ21993 3293525 3293800 - IS1_protein_InsA insA-n2 CDZ21994 3293989 3296325 - ArcB_sensory_histidine_kinase arcB CDZ21995 3296421 3297350 - predicted_Fe-S_oxidoreductase yhcC CDZ21996 3297932 3302485 + glutamate_synthase,_large_subunit gltB CDZ21997 3302498 3303916 + glutamate_synthase,_small_subunit gltD CDZ21998 3304476 3305240 + periplasmic_protein gltF CDZ21999 3305412 3306086 + predicted_periplasmic_chaperone_protein yhcA CDZ22000 3306107 3308488 + predicted_outer_membrane_protein yhcD CDZ22001 3308485 3308964 + predicted_protein,_N-ter_fragment_(pseudogene) ychE_1 CDZ22002 3309002 3310018 - IS5_transposase_and_trans-activator insH-10 CDZ22003 3310226 3310942 + predicted_transcriptional_regulator yhcF CDZ22004 3311127 3312254 + conserved_protein yhcG CDZ22005 3312314 3312778 - conserved_protein yhcH CDZ22006 3312775 3313650 - N-acetylmannosamine_kinase nanK CDZ22007 3313647 3314336 - predicted_N-acetylmannosamine-6-phosphate epimerase nanE CDZ22008 3314384 3315874 - N-acetylneuraminate:H[+]_symporter nanT CDZ22009 3315983 3316876 - N-acetylneuraminate_lyase nanA CDZ22010 3316998 3317789 - NanR_DNA-binding_transcriptional_dual_regulator nanR CDZ22011 3318169 3319536 + YhcL_DcuC_transporter dcuD CDZ22012 3319579 3320076 - ClpXP_protease_specificity-enhancing_factor sspB CDZ22013 3320082 3320720 - stringent_starvation_protein_A sspA CDZ22014 3321115 3321507 - 30S_ribosomal_subunit_protein_S9,_subunit_of ribosome rpsI CDZ22015 3321523 3321951 - 50S_ribosomal_subunit_protein_L13,_subunit_of ribosome rplM CDZ22016 3322170 3323297 - conserved_protein_with_nucleoside_triphosphate hydrolase domain yhcM CDZ22017 3323491 3323889 + conserved_protein yhcB CDZ22018 3324043 3325410 + serine_endoprotease,_periplasmic degQ CDZ22019 3325500 3326567 + DegS_serine_endoprotease degS CDZ22020 3326630 3327568 - malate_dehydrogenase mdh CDZ22021 3328003 3328473 + ArgR_transcriptional_dual_regulator argR CDZ22022 3328838 3329101 + stress-induced_protein yhcN CDZ22023 3329157 3329429 - predicted_barnase_inhibitor yhcO CDZ22024 3329521 3331488 - hydroxylated,_aromatic_carboxylic_acid_efflux aaeB CDZ22025 3331494 3332426 - hydroxylated,_aromatic_carboxylic_acid_efflux aaeA CDZ22026 3332434 3332637 - hypothetical_protein aaeX CDZ22027 3332820 3333749 + quorum_sensing_transcriptional_regulator_of LYSR-type aaeR CDZ22028 3333883 3335328 - protease_involved_in_Microcin_B17_maturation_and in sensitivity to the DNA gyrase inhibitor LetD tldD CDZ22029 3335758 3339558 - conserved_membrane_protein,_predicted transporter yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 CDZ22004 90 682 107.449856734 0.0 PJR32597.1 CDZ22007 99 456 100.0 1e-160 PJR32599.1 CDZ22009 100 611 100.0 0.0 PJR32600.1 CDZ22010 99 536 100.0 0.0 >> 423. LM993812_0 Source: Escherichia coli genome assembly EcHMS174Chr, chromosome : 1. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: CDY62145 3300346 3300618 + phosphocarrier_protein_HPr-like_NPr,_nitrogen related, exchanges phosphate with Enzyme I, Hpr npr CDY62150 3300832 3301464 + predicted_protein yrbL CDY62154 3301461 3302189 - biosynthetic_peptidoglycan_transglycosylase mtgA CDY62158 3302186 3302839 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain elbB CDY62162 3303069 3305405 - ArcB_sensory_histidine_kinase arcB CDY62167 3305501 3306430 - predicted_Fe-S_oxidoreductase yhcC CDY62170 3307012 3311565 + glutamate_synthase,_large_subunit gltB CDY62173 3311578 3312996 + glutamate_synthase,_small_subunit gltD CDY62175 3313556 3314320 + periplasmic_protein gltF CDY62182 3314492 3315166 + predicted_periplasmic_chaperone_protein yhcA CDY62183 3315187 3317568 + predicted_outer_membrane_protein yhcD CDY62188 3317565 3318044 + predicted_protein,_N-ter_fragment_(pseudogene) ychE_1 CDY62194 3318082 3319098 - IS5_transposase_and_trans-activator insH-10 CDY62195 3319306 3320022 + predicted_transcriptional_regulator yhcF CDY62202 3320207 3321334 + conserved_protein yhcG CDY62206 3321394 3321858 - conserved_protein yhcH CDY62208 3321855 3322730 - N-acetylmannosamine_kinase nanK CDY62214 3322727 3323416 - predicted_N-acetylmannosamine-6-phosphate epimerase nanE CDY62217 3323464 3324954 - N-acetylneuraminate:H[+]_symporter nanT CDY62218 3325063 3325956 - N-acetylneuraminate_lyase nanA CDY62221 3326078 3326869 - NanR_DNA-binding_transcriptional_dual_regulator nanR CDY62222 3327249 3328616 + YhcL_DcuC_transporter dcuD CDY62223 3328659 3329156 - ClpXP_protease_specificity-enhancing_factor sspB CDY62225 3329162 3329800 - stringent_starvation_protein_A sspA CDY62229 3330195 3330587 - 30S_ribosomal_subunit_protein_S9,_subunit_of ribosome rpsI CDY62230 3330603 3331031 - 50S_ribosomal_subunit_protein_L13,_subunit_of ribosome rplM CDY62231 3331250 3332377 - conserved_protein_with_nucleoside_triphosphate hydrolase domain yhcM CDY62233 3332571 3332969 + conserved_protein yhcB CDY62234 3333123 3334490 + serine_endoprotease,_periplasmic degQ CDY62237 3334580 3335647 + DegS_serine_endoprotease degS CDY62241 3335710 3336648 - malate_dehydrogenase mdh CDY62242 3337083 3337553 + ArgR_transcriptional_dual_regulator argR CDY62243 3337918 3338181 + stress-induced_protein yhcN CDY62244 3338237 3338509 - predicted_barnase_inhibitor yhcO CDY62246 3338601 3340568 - hydroxylated,_aromatic_carboxylic_acid_efflux aaeB CDY62250 3340574 3341506 - hydroxylated,_aromatic_carboxylic_acid_efflux aaeA CDY62251 3341514 3341717 - hypothetical_protein aaeX CDY62255 3341900 3342829 + quorum_sensing_transcriptional_regulator_of LYSR-type aaeR CDY62259 3342963 3344408 - protease_involved_in_Microcin_B17_maturation_and in sensitivity to the DNA gyrase inhibitor LetD tldD CDY62260 3344838 3348638 - conserved_membrane_protein,_predicted transporter yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 CDY62202 90 682 107.449856734 0.0 PJR32597.1 CDY62214 99 456 100.0 1e-160 PJR32599.1 CDY62218 100 611 100.0 0.0 PJR32600.1 CDY62221 99 536 100.0 0.0 >> 424. CP049299_0 Source: Escherichia coli strain pV01-18-E02-025-051 chromosome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: QIH02505 2552165 2553610 + metalloprotease_TldD tldD QIH02506 2553744 2554673 - HTH-type_transcriptional_activator_AaeR aaeR QIH02507 2554856 2555059 + AaeX_family_protein G4R05_12405 QIH02508 2555067 2555999 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QIH02509 2556005 2557972 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIH02510 2558064 2558336 + hypothetical_protein G4R05_12420 QIH02511 2558392 2558655 - peroxide/acid_stress_response_protein_YhcN yhcN QIH02512 2559020 2559490 - transcriptional_regulator_ArgR argR QIH02513 2559925 2560863 + malate_dehydrogenase mdh QIH02514 2560926 2561993 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QIH02515 2562083 2563450 - serine_endoprotease_DegQ degQ QIH02516 2563604 2564002 - DUF1043_family_protein G4R05_12450 QIH02517 2564196 2565323 + cell_division_protein_ZapE G4R05_12455 QIH02518 2565542 2565970 + 50S_ribosomal_protein_L13 rplM QIH02519 2565986 2566378 + 30S_ribosomal_protein_S9 rpsI QIH02520 2566773 2567411 + stringent_starvation_protein_A sspA QIH02521 2567417 2567914 + ClpXP_protease_specificity-enhancing_factor sspB QIH02522 2567957 2569324 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIH02523 2569704 2570495 + transcriptional_regulator_NanR nanR QIH02524 2570617 2571510 + N-acetylneuraminate_lyase nanA QIH02525 2571619 2573109 + sialic_acid_transporter_NanT nanT QIH02526 2573157 2573846 + N-acetylmannosamine-6-phosphate_2-epimerase G4R05_12500 QIH02527 2573843 2574718 + N-acetylmannosamine_kinase nanK QIH02528 2574715 2575179 + DUF386_domain-containing_protein G4R05_12510 QIH02529 2575239 2576366 - DUF1016_domain-containing_protein G4R05_12515 QIH02530 2576551 2577267 - DUF1120_domain-containing_protein G4R05_12520 G4R05_12525 2577264 2577465 - hypothetical_protein no_locus_tag QIH02531 2577475 2578491 + IS5-like_element_IS5_family_transposase G4R05_12530 G4R05_12535 2578640 2579008 - hypothetical_protein no_locus_tag QIH02532 2579005 2581386 - fimbrial_biogenesis_outer_membrane_usher protein G4R05_12540 QIH02533 2581407 2582081 - fimbria/pilus_periplasmic_chaperone G4R05_12545 QIH02534 2582253 2583017 - DUF1120_domain-containing_protein G4R05_12550 QIH02535 2583577 2584995 - glutamate_synthase_subunit_GltD gltD QIH04478 2585008 2589468 - glutamate_synthase_large_subunit gltB QIH02536 2590143 2591072 + TIGR01212_family_radical_SAM_protein G4R05_12565 QIH02537 2591168 2593504 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIH02538 2593734 2594387 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIH02539 2594384 2595112 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QIH02540 2595109 2595741 - PhoP_regulatory_network_protein_YrbL yrbL QIH02541 2595955 2596227 - PTS_phosphocarrier_protein_NPr npr QIH02542 2596224 2597078 - RNase_adapter_RapZ rapZ Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QIH02529 90 682 107.449856734 0.0 PJR32597.1 QIH02526 99 456 100.0 1e-160 PJR32599.1 QIH02524 100 611 100.0 0.0 PJR32600.1 QIH02523 99 536 100.0 0.0 >> 425. CP040663_0 Source: Escherichia coli strain EK2009 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: QCW36087 3311653 3311925 + PTS_phosphocarrier_protein_NPr npr QCW36088 3312139 3312771 + PhoP_regulatory_network_protein_YrbL yrbL QCW36089 3312768 3313496 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QCW36090 3313493 3314146 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QCW36091 3314376 3316712 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QCW36092 3316808 3317737 - TIGR01212_family_radical_SAM_protein FE383_16235 QCW37316 3318412 3322872 + glutamate_synthase_large_subunit gltB QCW36093 3322885 3324303 + glutamate_synthase FE383_16245 QCW36094 3324863 3325627 + DUF1120_domain-containing_protein FE383_16250 QCW36095 3325799 3326473 + fimbrial_chaperone_protein FE383_16255 QCW36096 3326494 3328875 + fimbrial_biogenesis_outer_membrane_usher protein FE383_16260 FE383_16265 3328872 3329240 + hypothetical_protein no_locus_tag QCW36097 3329389 3330405 - IS5-like_element_IS5_family_transposase FE383_16270 FE383_16275 3330428 3330607 + hypothetical_protein no_locus_tag QCW36098 3330604 3331320 + DUF1120_domain-containing_protein FE383_16280 QCW36099 3331505 3332632 + DUF1016_domain-containing_protein FE383_16285 QCW36100 3332692 3333156 - DUF386_domain-containing_protein FE383_16290 QCW36101 3333153 3334028 - N-acetylmannosamine_kinase FE383_16295 QCW36102 3334025 3334714 - N-acetylmannosamine-6-phosphate_2-epimerase FE383_16300 QCW36103 3334762 3336252 - sialic_acid_transporter_NanT nanT QCW36104 3336361 3337254 - N-acetylneuraminate_lyase nanA QCW36105 3337376 3338167 - transcriptional_regulator_NanR nanR dcuC 3338547 3339915 + anaerobic_C4-dicarboxylate_transporter_DcuC no_locus_tag QCW36106 3339958 3340455 - ClpXP_protease_specificity-enhancing_factor sspB QCW36107 3340461 3341099 - stringent_starvation_protein_A sspA QCW36108 3341494 3341886 - 30S_ribosomal_protein_S9 rpsI QCW36109 3341902 3342330 - 50S_ribosomal_protein_L13 rplM QCW36110 3342549 3343676 - cell_division_protein_ZapE FE383_16345 QCW36111 3343870 3344268 + DUF1043_family_protein FE383_16350 QCW36112 3344422 3345789 + serine_endoprotease_DegQ degQ QCW36113 3345879 3346946 + serine_endoprotease_DegS FE383_16360 QCW36114 3347009 3347947 - malate_dehydrogenase mdh QCW36115 3348382 3348852 + transcriptional_regulator_ArgR argR QCW36116 3349217 3349480 + peroxide/acid_stress_response_protein_YhcN yhcN QCW36117 3349536 3349808 - hypothetical_protein FE383_16380 QCW36118 3349900 3351867 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCW36119 3351873 3352805 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCW36120 3352813 3353016 - DUF1656_domain-containing_protein FE383_16395 QCW36121 3353199 3354128 + HTH-type_transcriptional_activator_AaeR aaeR QCW36122 3354262 3355707 - metalloprotease_TldD tldD QCW36123 3356137 3359937 - AsmA2_domain-containing_protein FE383_16410 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCW36099 90 682 107.449856734 0.0 PJR32597.1 QCW36102 99 456 100.0 1e-160 PJR32599.1 QCW36104 100 611 100.0 0.0 PJR32600.1 QCW36105 99 536 100.0 0.0 >> 426. CP040643_0 Source: Escherichia coli strain BE104 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: QCV92582 3480853 3481125 + PTS_phosphocarrier_protein_NPr npr QCV92583 3481339 3481971 + PhoP_regulatory_network_protein_YrbL yrbL QCV92584 3481968 3482696 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QCV92585 3482693 3483346 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QCV92586 3483576 3485912 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QCV92587 3486008 3486937 - TIGR01212_family_radical_SAM_protein FGC38_17210 QCV93843 3487612 3492072 + glutamate_synthase_large_subunit gltB QCV92588 3492085 3493503 + glutamate_synthase FGC38_17220 QCV92589 3494063 3494827 + DUF1120_domain-containing_protein FGC38_17225 QCV92590 3494999 3495673 + fimbrial_chaperone_protein FGC38_17230 QCV92591 3495694 3498075 + fimbrial_biogenesis_outer_membrane_usher protein FGC38_17235 FGC38_17240 3498072 3498440 + hypothetical_protein no_locus_tag QCV92592 3498589 3499605 - IS5-like_element_IS5_family_transposase FGC38_17245 FGC38_17250 3499615 3499816 + hypothetical_protein no_locus_tag QCV92593 3499813 3500529 + DUF1120_domain-containing_protein FGC38_17255 QCV92594 3500714 3501841 + DUF1016_domain-containing_protein FGC38_17260 QCV92595 3501901 3502365 - DUF386_domain-containing_protein FGC38_17265 QCV92596 3502362 3503237 - N-acetylmannosamine_kinase FGC38_17270 QCV92597 3503234 3503923 - N-acetylmannosamine-6-phosphate_2-epimerase FGC38_17275 QCV92598 3503971 3505461 - sialic_acid_transporter_NanT nanT QCV92599 3505570 3506463 - N-acetylneuraminate_lyase nanA QCV92600 3506585 3507376 - transcriptional_regulator_NanR nanR QCV92601 3507756 3509123 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QCV92602 3509166 3509663 - ClpXP_protease_specificity-enhancing_factor sspB QCV92603 3509669 3510307 - stringent_starvation_protein_A sspA QCV92604 3510702 3511094 - 30S_ribosomal_protein_S9 rpsI QCV92605 3511110 3511538 - 50S_ribosomal_protein_L13 rplM QCV92606 3511757 3512884 - cell_division_protein_ZapE FGC38_17320 QCV92607 3513078 3513476 + DUF1043_family_protein FGC38_17325 QCV92608 3513630 3514997 + serine_endoprotease_DegQ degQ QCV92609 3515087 3516154 + serine_endoprotease_DegS FGC38_17335 QCV92610 3516217 3517155 - malate_dehydrogenase mdh QCV92611 3517590 3518060 + transcriptional_regulator_ArgR argR QCV92612 3518425 3518688 + peroxide/acid_stress_response_protein_YhcN yhcN QCV92613 3518744 3519016 - hypothetical_protein FGC38_17355 QCV92614 3519108 3521075 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCV92615 3521081 3522013 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCV92616 3522021 3522224 - DUF1656_domain-containing_protein FGC38_17370 QCV92617 3522407 3523336 + HTH-type_transcriptional_activator_AaeR aaeR QCV92618 3523470 3524915 - metalloprotease_TldD tldD QCV92619 3525345 3529145 - AsmA2_domain-containing_protein FGC38_17385 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCV92594 90 682 107.449856734 0.0 PJR32597.1 QCV92597 99 456 100.0 1e-160 PJR32599.1 QCV92599 100 611 100.0 0.0 PJR32600.1 QCV92600 99 536 100.0 0.0 >> 427. CP032667_0 Source: Escherichia coli str. K-12 substr. MG1655 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: AYG17807 491347 492792 + metalloprotease_TldD tldD AYG17808 492926 493855 - HTH-type_transcriptional_activator_AaeR aaeR AYG17809 494038 494241 + protein_AaeX D8B36_02440 AYG17810 494249 495181 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AYG17811 495187 497154 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AYG17812 497246 497518 + hypothetical_protein D8B36_02455 AYG17813 497574 497837 - DUF1471_domain-containing_protein D8B36_02460 AYG17814 498202 498672 - transcriptional_regulator_ArgR argR AYG17815 499107 500045 + malate_dehydrogenase D8B36_02470 AYG17816 500108 501175 - outer_membrane-stress_sensor_serine endopeptidase DegS D8B36_02475 AYG17817 501265 502632 - periplasmic_pH-dependent_serine_endoprotease DegQ D8B36_02480 AYG17818 502786 503184 - DUF1043_family_protein D8B36_02485 AYG17819 503378 504505 + cell_division_protein_ZapE zapE AYG17820 504724 505152 + 50S_ribosomal_protein_L13 D8B36_02495 AYG17821 505168 505560 + 30S_ribosomal_protein_S9 D8B36_02500 AYG17822 505955 506593 + stringent_starvation_protein_A D8B36_02505 AYG17823 506599 507096 + stringent_starvation_protein_B D8B36_02510 AYG17824 507139 508506 - C4-dicarboxylate_transporter_DcuC dcuC AYG17825 508886 509677 + transcriptional_regulator_NanR D8B36_02520 AYG17826 509799 510692 + N-acetylneuraminate_lyase nanA AYG17827 510801 512291 + MFS_transporter D8B36_02530 AYG17828 512339 513028 + N-acetylmannosamine-6-phosphate_2-epimerase D8B36_02535 AYG17829 513025 513900 + ROK_family_protein D8B36_02540 AYG17830 513897 514361 + YhcH/YjgK/YiaL_family_protein D8B36_02545 AYG17831 514421 515548 - DUF1016_domain-containing_protein D8B36_02550 AYG17832 515733 516449 - DUF1120_domain-containing_protein D8B36_02555 D8B36_02560 516446 516647 - hypothetical_protein no_locus_tag AYG17833 516657 517673 + IS5-like_element_IS5_family_transposase D8B36_02565 D8B36_02570 517822 518190 - hypothetical_protein no_locus_tag AYG17834 518187 520568 - fimbrial_biogenesis_outer_membrane_usher protein D8B36_02575 AYG17835 520589 521263 - fimbrial_chaperone_protein D8B36_02580 AYG17836 521435 522199 - glutamate_synthase_operon_protein_GltF D8B36_02585 AYG17837 522320 522604 - hypothetical_protein D8B36_02590 AYG17838 522759 524177 - glutamate_synthase D8B36_02595 AYG17839 524190 528650 - glutamate_synthase_large_subunit D8B36_02600 AYG21494 529325 530254 + TIGR01212_family_radical_SAM_protein D8B36_02605 AYG17840 530350 532686 + hybrid_sensor_histidine_kinase/response regulator D8B36_02610 AYG17841 532916 533569 + glutamine_amidotransferase D8B36_02615 AYG17842 533566 534294 + monofunctional_biosynthetic_peptidoglycan transglycosylase D8B36_02620 AYG17843 534291 534923 - PhoP_regulatory_network_protein_YrbL yrbL AYG17844 535137 535409 - phosphocarrier_protein_NPr D8B36_02630 AYG17845 535406 536260 - RNase_adaptor_protein_RapZ D8B36_02635 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AYG17831 90 682 107.449856734 0.0 PJR32597.1 AYG17828 99 456 100.0 1e-160 PJR32599.1 AYG17826 100 611 100.0 0.0 PJR32600.1 AYG17825 99 536 100.0 0.0 >> 428. CP019629_0 Source: Escherichia coli strain MGY chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: AQP93105 3349562 3349834 + phosphocarrier_protein_NPr BWL12_17785 AQP93106 3350048 3350680 + hypothetical_protein BWL12_17790 AQP93107 3350677 3351405 - monofunctional_biosynthetic_peptidoglycan transglycosylase BWL12_17795 AQP93108 3351402 3352055 - glutamine_amidotransferase BWL12_17800 AQP93109 3352285 3354621 - hybrid_sensor_histidine_kinase/response regulator BWL12_17805 AQP94444 3354717 3355646 - TIGR01212_family_radical_SAM_protein BWL12_17810 AQP93110 3356038 3356274 - hypothetical_protein BWL12_17815 BWL12_17820 3356172 3356398 - hypothetical_protein no_locus_tag AQP93111 3356321 3360781 + glutamate_synthase_large_subunit BWL12_17825 AQP93112 3360794 3362212 + glutamate_synthase BWL12_17830 AQP93113 3362190 3362375 - hypothetical_protein BWL12_17835 AQP93114 3362367 3362651 + hypothetical_protein BWL12_17840 AQP93115 3362772 3363536 + glutamate_synthase_operon_protein_GltF BWL12_17845 AQP93116 3363708 3364382 + fimbrial_chaperone_protein BWL12_17850 AQP93117 3364403 3366784 + fimbrial_protein BWL12_17855 AQP93118 3366781 3367260 + hypothetical_protein BWL12_17860 AQP93119 3367298 3368278 - IS5_family_transposase BWL12_17865 AQP93120 3368277 3368525 + hypothetical_protein BWL12_17870 AQP93121 3368522 3369238 + hypothetical_protein BWL12_17875 AQP93122 3369423 3370550 + hypothetical_protein BWL12_17880 AQP93123 3370610 3371074 - hypothetical_protein BWL12_17885 AQP93124 3371071 3371946 - N-acetylmannosamine_kinase BWL12_17890 AQP93125 3371943 3372632 - N-acetylmannosamine-6-phosphate_2-epimerase BWL12_17895 AQP93126 3372680 3374170 - MFS_transporter BWL12_17900 AQP93127 3374279 3375172 - N-acetylneuraminate_lyase BWL12_17905 AQP93128 3375294 3376085 - transcriptional_regulator_NanR BWL12_17910 BWL12_17915 3376355 3376465 - transposase no_locus_tag AQP93129 3376465 3377832 + C4-dicarboxylate_transporter BWL12_17920 AQP93130 3377875 3378372 - stringent_starvation_protein_B BWL12_17925 AQP93131 3378378 3379016 - stringent_starvation_protein_A sspA AQP93132 3379411 3379803 - 30S_ribosomal_protein_S9 BWL12_17935 AQP93133 3379819 3380247 - 50S_ribosomal_protein_L13 BWL12_17940 AQP93134 3380466 3381593 - cell_division_protein_ZapE BWL12_17945 AQP93135 3381787 3382185 + hypothetical_protein BWL12_17950 AQP93136 3382339 3383706 + periplasmic_pH-dependent_serine_endoprotease DegQ BWL12_17955 AQP93137 3383796 3384863 + outer_membrane-stress_sensor_serine endopeptidase DegS BWL12_17960 AQP93138 3384926 3385864 - malate_dehydrogenase BWL12_17965 AQP93139 3386299 3386769 + arginine_repressor BWL12_17970 AQP93140 3387134 3387397 + hypothetical_protein BWL12_17975 AQP93141 3387453 3387725 - hypothetical_protein BWL12_17980 AQP93142 3387817 3389784 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BWL12_17985 AQP93143 3389790 3390722 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA BWL12_17990 AQP93144 3390730 3390933 - protein_AaeX BWL12_17995 AQP93145 3391116 3392045 + HTH-type_transcriptional_activator_AaeR BWL12_18000 AQP93146 3392179 3393624 - metalloprotease_TldD BWL12_18005 AQP93147 3394054 3397854 - DUF3971_domain-containing_protein BWL12_18010 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AQP93122 90 682 107.449856734 0.0 PJR32597.1 AQP93125 99 456 100.0 1e-160 PJR32599.1 AQP93127 100 611 100.0 0.0 PJR32600.1 AQP93128 99 536 100.0 0.0 >> 429. CP012870_0 Source: Escherichia coli strain K-12 substrain MG1655_TMP32XR2, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: ALI47866 1249628 1251073 + protease_TldD tldD ALI47867 1251207 1252136 - transcriptional_regulator QR63_06150 ALI51002 1252319 1252522 + transporter QR63_06155 ALI47868 1252530 1253462 + p-hydroxybenzoic_acid_efflux_subunit_AaeA QR63_06160 ALI47869 1253468 1255435 + p-hydroxybenzoic_acid_efflux_subunit_AaeB QR63_06165 ALI47870 1255527 1255799 + hypothetical_protein QR63_06170 ALI47871 1255855 1256118 - hypothetical_protein QR63_06175 ALI47872 1256483 1256953 - arginine_repressor QR63_06180 ALI47873 1257388 1258326 + malate_dehydrogenase QR63_06185 ALI47874 1258389 1259456 - serine_endoprotease QR63_06190 ALI47875 1259546 1260913 - serine_endoprotease_DegQ QR63_06195 ALI47876 1261067 1261465 - hypothetical_protein QR63_06200 ALI47877 1261659 1262786 + hypothetical_protein QR63_06205 ALI47878 1263005 1263433 + 50S_ribosomal_protein_L13 QR63_06210 ALI47879 1263449 1263841 + 30S_ribosomal_protein_S9 QR63_06215 ALI47880 1264236 1264874 + stringent_starvation_protein_A sspA ALI47881 1264880 1265377 + Clp_protease_ClpP QR63_06225 ALI47882 1265420 1266787 - C4-dicarboxylate_transporter QR63_06230 ALI47883 1267167 1267958 + transcriptional_regulator_NanR QR63_06235 ALI47884 1268080 1268973 + N-acetylneuraminate_lyase QR63_06240 ALI47885 1269082 1270572 + sialic_acid_transporter QR63_06245 ALI47886 1270620 1271309 + N-acetylmannosamine-6-phosphate_2-epimerase QR63_06250 ALI47887 1271306 1272181 + N-acetylmannosamine_kinase QR63_06255 ALI47888 1272178 1272642 + hypothetical_protein QR63_06260 ALI47889 1272702 1273829 - hypothetical_protein QR63_06265 ALI47890 1274014 1274730 - hypothetical_protein QR63_06270 ALI47891 1274727 1274975 - hypothetical_protein QR63_06275 ALI47892 1274974 1275954 + transposase QR63_06280 QR63_06285 1276103 1276471 - hypothetical_protein no_locus_tag ALI47893 1276468 1278849 - fimbrial_protein QR63_06290 ALI47894 1278870 1279544 - fimbrial_chaperone_protein QR63_06295 ALI47895 1279716 1280480 - glutamate_synthase_operon_protein_GltF QR63_06300 ALI47896 1281040 1282458 - glutamate_synthase QR63_06305 ALI51003 1282471 1286931 - glutamate_synthase gltB ALI51004 1287606 1288535 + radical_SAM_protein QR63_06315 ALI47897 1288631 1290967 + aerobic_respiration_control_sensor_protein_ArcB QR63_06320 ALI47898 1291197 1291850 + isoprenoid_biosynthesis_protein QR63_06325 ALI47899 1291847 1292575 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA ALI47900 1292572 1293204 - hypothetical_protein QR63_06335 ALI47901 1293418 1293690 - phosphohistidinoprotein-hexose phosphotransferase QR63_06340 ALI47902 1293687 1294541 - glmZ(sRNA)-inactivating_NTPase QR63_06345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ALI47889 90 682 107.449856734 0.0 PJR32597.1 ALI47886 99 456 100.0 1e-160 PJR32599.1 ALI47884 100 611 100.0 0.0 PJR32600.1 ALI47883 99 536 100.0 0.0 >> 430. CP012869_0 Source: Escherichia coli strain K-12 substrain MG1655_TMP32XR1, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: ALI43470 1249628 1251073 + protease_TldD tldD ALI43471 1251207 1252136 - transcriptional_regulator QR62_06150 ALI46603 1252319 1252522 + transporter QR62_06155 ALI43472 1252530 1253462 + p-hydroxybenzoic_acid_efflux_subunit_AaeA QR62_06160 ALI43473 1253468 1255435 + p-hydroxybenzoic_acid_efflux_subunit_AaeB QR62_06165 ALI43474 1255527 1255799 + hypothetical_protein QR62_06170 ALI43475 1255855 1256118 - hypothetical_protein QR62_06175 ALI43476 1256483 1256953 - arginine_repressor QR62_06180 ALI43477 1257388 1258326 + malate_dehydrogenase QR62_06185 ALI43478 1258389 1259456 - serine_endoprotease QR62_06190 ALI43479 1259546 1260913 - serine_endoprotease_DegQ QR62_06195 ALI43480 1261067 1261465 - hypothetical_protein QR62_06200 ALI43481 1261659 1262786 + hypothetical_protein QR62_06205 ALI43482 1263005 1263433 + 50S_ribosomal_protein_L13 QR62_06210 ALI43483 1263449 1263841 + 30S_ribosomal_protein_S9 QR62_06215 ALI43484 1264236 1264874 + stringent_starvation_protein_A sspA ALI43485 1264880 1265377 + Clp_protease_ClpP QR62_06225 ALI43486 1265420 1266787 - C4-dicarboxylate_transporter QR62_06230 ALI43487 1267167 1267958 + transcriptional_regulator_NanR QR62_06235 ALI43488 1268080 1268973 + N-acetylneuraminate_lyase QR62_06240 ALI43489 1269082 1270572 + sialic_acid_transporter QR62_06245 ALI43490 1270620 1271309 + N-acetylmannosamine-6-phosphate_2-epimerase QR62_06250 ALI43491 1271306 1272181 + N-acetylmannosamine_kinase QR62_06255 ALI43492 1272178 1272642 + hypothetical_protein QR62_06260 ALI43493 1272702 1273829 - hypothetical_protein QR62_06265 ALI43494 1274014 1274730 - hypothetical_protein QR62_06270 ALI43495 1274727 1274975 - hypothetical_protein QR62_06275 ALI43496 1274974 1275954 + transposase QR62_06280 QR62_06285 1276103 1276471 - hypothetical_protein no_locus_tag ALI43497 1276468 1278849 - fimbrial_protein QR62_06290 ALI43498 1278870 1279544 - fimbrial_chaperone_protein QR62_06295 ALI43499 1279716 1280480 - glutamate_synthase_operon_protein_GltF QR62_06300 ALI43500 1281040 1282458 - glutamate_synthase QR62_06305 ALI46604 1282471 1286931 - glutamate_synthase gltB ALI46605 1287606 1288535 + radical_SAM_protein QR62_06315 ALI43501 1288631 1290967 + aerobic_respiration_control_sensor_protein_ArcB QR62_06320 ALI43502 1291197 1291850 + isoprenoid_biosynthesis_protein QR62_06325 ALI43503 1291847 1292575 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA ALI43504 1292572 1293204 - hypothetical_protein QR62_06335 ALI43505 1293418 1293690 - phosphohistidinoprotein-hexose phosphotransferase QR62_06340 ALI43506 1293687 1294541 - glmZ(sRNA)-inactivating_NTPase QR62_06345 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ALI43493 90 682 107.449856734 0.0 PJR32597.1 ALI43490 99 456 100.0 1e-160 PJR32599.1 ALI43488 100 611 100.0 0.0 PJR32600.1 ALI43487 99 536 100.0 0.0 >> 431. CP012868_0 Source: Escherichia coli str. K-12 substr. MG1655, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: ALI39070 1249628 1251073 + protease_TldD tldD ALI39071 1251207 1252136 - transcriptional_regulator QQ24_06145 ALI42207 1252319 1252522 + transporter QQ24_06150 ALI39072 1252530 1253462 + p-hydroxybenzoic_acid_efflux_subunit_AaeA QQ24_06155 ALI39073 1253468 1255435 + p-hydroxybenzoic_acid_efflux_subunit_AaeB QQ24_06160 ALI39074 1255527 1255799 + hypothetical_protein QQ24_06165 ALI39075 1255855 1256118 - hypothetical_protein QQ24_06170 ALI39076 1256483 1256953 - arginine_repressor QQ24_06175 ALI39077 1257388 1258326 + malate_dehydrogenase QQ24_06180 ALI39078 1258389 1259456 - serine_endoprotease QQ24_06185 ALI39079 1259546 1260913 - serine_endoprotease_DegQ QQ24_06190 ALI39080 1261067 1261465 - hypothetical_protein QQ24_06195 ALI39081 1261659 1262786 + hypothetical_protein QQ24_06200 ALI39082 1263005 1263433 + 50S_ribosomal_protein_L13 QQ24_06205 ALI39083 1263449 1263841 + 30S_ribosomal_protein_S9 QQ24_06210 ALI39084 1264236 1264874 + stringent_starvation_protein_A sspA ALI39085 1264880 1265377 + Clp_protease_ClpP QQ24_06220 ALI39086 1265420 1266787 - C4-dicarboxylate_transporter QQ24_06225 ALI39087 1267167 1267958 + transcriptional_regulator_NanR QQ24_06230 ALI39088 1268080 1268973 + N-acetylneuraminate_lyase QQ24_06235 ALI39089 1269082 1270572 + sialic_acid_transporter QQ24_06240 ALI39090 1270620 1271309 + N-acetylmannosamine-6-phosphate_2-epimerase QQ24_06245 ALI39091 1271306 1272181 + N-acetylmannosamine_kinase QQ24_06250 ALI39092 1272178 1272642 + hypothetical_protein QQ24_06255 ALI39093 1272702 1273829 - hypothetical_protein QQ24_06260 ALI39094 1274014 1274730 - hypothetical_protein QQ24_06265 ALI39095 1274727 1274975 - hypothetical_protein QQ24_06270 ALI39096 1274974 1275954 + transposase QQ24_06275 QQ24_06280 1276103 1276471 - hypothetical_protein no_locus_tag ALI39097 1276468 1278849 - fimbrial_protein QQ24_06285 ALI39098 1278870 1279544 - fimbrial_chaperone_protein QQ24_06290 ALI39099 1279716 1280480 - glutamate_synthase_operon_protein_GltF QQ24_06295 ALI39100 1281040 1282458 - glutamate_synthase QQ24_06300 ALI42208 1282471 1286931 - glutamate_synthase gltB ALI42209 1287606 1288535 + radical_SAM_protein QQ24_06310 ALI39101 1288631 1290967 + aerobic_respiration_control_sensor_protein_ArcB QQ24_06315 ALI39102 1291197 1291850 + isoprenoid_biosynthesis_protein QQ24_06320 ALI39103 1291847 1292575 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA ALI39104 1292572 1293204 - hypothetical_protein QQ24_06330 ALI39105 1293418 1293690 - phosphohistidinoprotein-hexose phosphotransferase QQ24_06335 ALI39106 1293687 1294541 - glmZ(sRNA)-inactivating_NTPase QQ24_06340 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ALI39093 90 682 107.449856734 0.0 PJR32597.1 ALI39090 99 456 100.0 1e-160 PJR32599.1 ALI39088 100 611 100.0 0.0 PJR32600.1 ALI39087 99 536 100.0 0.0 >> 432. CP011113_0 Source: Escherichia coli strain RR1, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: ALB33238 3304683 3304955 + phosphohistidinoprotein-hexose phosphotransferase SR35_16350 ALB33239 3305169 3305801 + hypothetical_protein SR35_16355 ALB33240 3305798 3306526 - peptidoglycan_transglycosylase mtgA ALB33241 3306523 3307176 - isoprenoid_biosynthesis_protein SR35_16365 ALB33242 3307406 3309742 - aerobic_respiration_control_sensor_protein_ArcB SR35_16370 ALB34523 3309838 3310767 - hypothetical_protein SR35_16375 ALB34524 3311442 3315902 + glutamate_synthase gltB ALB33243 3315915 3317333 + glutamate_synthase SR35_16385 ALB33244 3317893 3318657 + gltF SR35_16390 ALB33245 3318829 3319503 + fimbrial_chaperone_protein SR35_16395 ALB33246 3319524 3321905 + fimbrial_protein SR35_16400 ALB34525 3322268 3322381 + sugar_kinase SR35_16410 ALB33247 3322419 3323399 - transposase SR35_16415 ALB33248 3323398 3323646 + hypothetical_protein SR35_16420 ALB33249 3323643 3324359 + hypothetical_protein SR35_16425 ALB33250 3324544 3325671 + hypothetical_protein SR35_16430 ALB33251 3325731 3326195 - hypothetical_protein SR35_16435 ALB33252 3326192 3327067 - N-acetylmannosamine_kinase SR35_16440 ALB33253 3327064 3327753 - N-acetylmannosamine-6-phosphate_2-epimerase SR35_16445 ALB33254 3327801 3329291 - sialic_acid_transporter SR35_16450 ALB33255 3329400 3330293 - N-acetylneuraminate_lyase SR35_16455 ALB33256 3330415 3331206 - transcriptional_regulator_NanR SR35_16460 ALB33257 3331586 3332953 + C4-dicarboxylate_transporter SR35_16465 ALB33258 3332996 3333493 - Clp_protease_ClpP SR35_16470 ALB33259 3333499 3334137 - stringent_starvation_protein_A sspA ALB33260 3334532 3334924 - 30S_ribosomal_protein_S9 SR35_16480 ALB33261 3334940 3335368 - 50S_ribosomal_protein_L13 SR35_16485 ALB33262 3335587 3336714 - hypothetical_protein SR35_16490 ALB34526 3336908 3337306 + hypothetical_protein SR35_16495 ALB33263 3337460 3338827 + serine_endoprotease_DegQ SR35_16500 ALB33264 3338917 3339984 + serine_endoprotease SR35_16505 ALB33265 3340047 3340985 - malate_dehydrogenase SR35_16510 ALB33266 3341420 3341890 + arginine_repressor SR35_16515 ALB33267 3342255 3342518 + membrane_protein SR35_16520 ALB33268 3342574 3342846 - hypothetical_protein SR35_16525 ALB33269 3342938 3344905 - p-hydroxybenzoic_acid_efflux_subunit_AaeB SR35_16530 ALB33270 3344911 3345843 - p-hydroxybenzoic_acid_efflux_subunit_AaeA SR35_16535 ALB34527 3345851 3346054 - transporter SR35_16540 ALB33271 3346237 3347166 + transcriptional_regulator SR35_16545 ALB33272 3347300 3348745 - protease_TldD tldD ALB33273 3349175 3352975 - hypothetical_protein SR35_16555 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ALB33250 90 682 107.449856734 0.0 PJR32597.1 ALB33253 99 456 100.0 1e-160 PJR32599.1 ALB33255 100 611 100.0 0.0 PJR32600.1 ALB33256 99 536 100.0 0.0 >> 433. CP010445_0 Source: Escherichia coli K-12 strain ER3435, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: AKD93311 4146483 4146755 + phosphohistidinoprotein-hexose phosphotransferase SF31_20555 AKD93312 4146969 4147601 + hypothetical_protein SF31_20560 AKD93313 4147598 4148326 - peptidoglycan_transglycosylase mtgA AKD93314 4148323 4148976 - isoprenoid_biosynthesis_protein SF31_20570 AKD93315 4149206 4151542 - aerobic_respiration_control_sensor_protein_ArcB SF31_20575 AKD93977 4151638 4152567 - hypothetical_protein SF31_20580 AKD93978 4153242 4157702 + glutamate_synthase gltB AKD93316 4157715 4159133 + glutamate_synthase SF31_20590 AKD93317 4159693 4160457 + gltF SF31_20595 AKD93318 4160629 4161303 + fimbrial_chaperone_protein SF31_20600 AKD93319 4161324 4163705 + fimbrial_protein SF31_20605 AKD93979 4164068 4164181 + sugar_kinase SF31_20615 AKD93320 4164219 4165199 - transposase SF31_20620 AKD93321 4165198 4165446 + hypothetical_protein SF31_20625 AKD93322 4165443 4166159 + hypothetical_protein SF31_20630 AKD93323 4166344 4167471 + hypothetical_protein SF31_20635 AKD93324 4167531 4167995 - hypothetical_protein SF31_20640 AKD93325 4167992 4168867 - N-acetylmannosamine_kinase SF31_20645 AKD93326 4168864 4169553 - N-acetylmannosamine-6-phosphate_2-epimerase SF31_20650 AKD93327 4169601 4171091 - sialic_acid_transporter SF31_20655 AKD93328 4171200 4172093 - N-acetylneuraminate_lyase SF31_20660 AKD93329 4172215 4173006 - transcriptional_regulator_NanR SF31_20665 AKD93330 4173386 4174753 + C4-dicarboxylate_transporter SF31_20670 AKD93331 4174796 4175293 - Clp_protease_ClpP SF31_20675 AKD93332 4175299 4175937 - stringent_starvation_protein_A sspA AKD93333 4176332 4176724 - 30S_ribosomal_protein_S9 SF31_20685 AKD93334 4176740 4177168 - 50S_ribosomal_protein_L13 SF31_20690 AKD93335 4177387 4178514 - hypothetical_protein SF31_20695 AKD93336 4178708 4179106 + hypothetical_protein SF31_20700 AKD93337 4179260 4180627 + serine_endoprotease_DegQ SF31_20705 AKD93338 4180717 4181784 + serine_endoprotease SF31_20710 AKD93339 4181847 4182785 - malate_dehydrogenase SF31_20715 AKD93340 4183220 4183690 + arginine_repressor SF31_20720 AKD93341 4184055 4184318 + membrane_protein SF31_20725 AKD93342 4184374 4184646 - hypothetical_protein SF31_20730 AKD93343 4184738 4186705 - p-hydroxybenzoic_acid_efflux_subunit_AaeB SF31_20735 AKD93344 4186711 4187643 - p-hydroxybenzoic_acid_efflux_subunit_AaeA SF31_20740 AKD93980 4187651 4187854 - transporter SF31_20745 AKD93345 4188037 4188966 + transcriptional_regulator SF31_20750 AKD93346 4189100 4190545 - protease_TldD tldD AKD93347 4190975 4194775 - hypothetical_protein SF31_20760 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKD93323 90 682 107.449856734 0.0 PJR32597.1 AKD93326 99 456 100.0 1e-160 PJR32599.1 AKD93328 100 611 100.0 0.0 PJR32600.1 AKD93329 99 536 100.0 0.0 >> 434. CP010444_0 Source: Escherichia coli K-12 strain ER3475, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: AKD88861 4072044 4073009 - membrane_protein SH07_20105 AKD88862 4073136 4073393 - 50S_ribosomal_protein_L27 rpmA AKD88863 4073414 4073725 - 50S_ribosomal_protein_L21 rplU AKD88864 4073984 4074955 + octaprenyl_diphosphate_synthase SH07_20120 AKD88865 4075183 4075461 + transcriptional_regulator SH07_20125 AKD88866 4075509 4076768 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase SH07_20130 AKD89531 4076823 4077077 - hypothetical_protein SH07_20135 AKD88867 4077237 4077530 - phospholipid_ABC_transporter_substrate-binding protein SH07_20140 AKD88868 4077530 4078165 - ABC_transporter_substrate-binding_protein SH07_20145 AKD89532 4078184 4078735 - phospholipid_ABC_transporter_substrate-binding protein SH07_20150 AKD88869 4078740 4079522 - ABC_transporter_permease SH07_20155 AKD88870 4079530 4080339 - ABC_transporter_ATP-binding_protein SH07_20160 AKD88871 4080549 4081526 + calcium/sodium:proton_antiporter SH07_20165 AKD88872 4081540 4082526 + D-arabinose_5-phosphate_isomerase SH07_20170 AKD88873 4082547 4083113 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase SH07_20175 AKD88874 4083110 4083685 + lipopolysaccharide_transporter SH07_20180 AKD88875 4083654 4084211 + lipopolysaccharide_transporter SH07_20185 AKD88876 4084218 4084943 + sugar_ABC_transporter_ATP-binding_protein SH07_20190 AKD88877 4084991 4086424 + RNA_polymerase_factor_sigma-54 SH07_20195 AKD88878 4086447 4086734 + ribosome_hibernation_promoting_factor_HPF SH07_20200 AKD88879 4086852 4087343 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) SH07_20205 AKD88880 4087389 4088243 + glmZ(sRNA)-inactivating_NTPase SH07_20210 AKD88881 4088240 4088512 + phosphohistidinoprotein-hexose phosphotransferase SH07_20215 AKD88882 4088726 4089358 + hypothetical_protein SH07_20220 AKD88883 4089626 4090606 - transposase SH07_20225 AKD88884 4090605 4090853 + hypothetical_protein SH07_20230 AKD88885 4090850 4091566 + hypothetical_protein SH07_20235 AKD88886 4091751 4092878 + hypothetical_protein SH07_20240 AKD88887 4092938 4093402 - hypothetical_protein SH07_20245 AKD88888 4093399 4094274 - N-acetylmannosamine_kinase SH07_20250 AKD88889 4094271 4094960 - N-acetylmannosamine-6-phosphate_2-epimerase SH07_20255 AKD88890 4095008 4096498 - sialic_acid_transporter SH07_20260 AKD88891 4096607 4097500 - N-acetylneuraminate_lyase SH07_20265 AKD88892 4097622 4098413 - transcriptional_regulator_NanR SH07_20270 AKD88893 4098793 4100160 + C4-dicarboxylate_transporter SH07_20275 AKD88894 4100203 4100700 - Clp_protease_ClpP SH07_20280 AKD88895 4100706 4101344 - stringent_starvation_protein_A sspA AKD88896 4101739 4102131 - 30S_ribosomal_protein_S9 SH07_20290 AKD88897 4102147 4102575 - 50S_ribosomal_protein_L13 SH07_20295 AKD88898 4102794 4103921 - hypothetical_protein SH07_20300 AKD88899 4104115 4104513 + hypothetical_protein SH07_20305 AKD88900 4104667 4106034 + serine_endoprotease_DegQ SH07_20310 AKD88901 4106124 4107191 + serine_endoprotease SH07_20315 AKD88902 4107254 4108192 - malate_dehydrogenase SH07_20320 AKD88903 4108627 4109097 + arginine_repressor SH07_20325 AKD88904 4109462 4109725 + membrane_protein SH07_20330 AKD88905 4109781 4110053 - hypothetical_protein SH07_20335 AKD88906 4110145 4112112 - p-hydroxybenzoic_acid_efflux_subunit_AaeB SH07_20340 AKD88907 4112118 4113050 - p-hydroxybenzoic_acid_efflux_subunit_AaeA SH07_20345 AKD89533 4113058 4113261 - transporter SH07_20350 AKD88908 4113444 4114373 + transcriptional_regulator SH07_20355 AKD88909 4114507 4115952 - protease_TldD tldD AKD88910 4116382 4120182 - hypothetical_protein SH07_20365 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKD88886 90 682 107.449856734 0.0 PJR32597.1 AKD88889 99 456 100.0 1e-160 PJR32599.1 AKD88891 100 611 100.0 0.0 PJR32600.1 AKD88892 99 536 100.0 0.0 >> 435. CP010443_0 Source: Escherichia coli K-12 strain ER3446, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: AKD84504 4069274 4070239 - membrane_protein SH04_20100 AKD84505 4070366 4070623 - 50S_ribosomal_protein_L27 rpmA AKD84506 4070644 4070955 - 50S_ribosomal_protein_L21 rplU AKD84507 4071214 4072185 + octaprenyl_diphosphate_synthase SH04_20115 AKD84508 4072413 4072691 + transcriptional_regulator SH04_20120 AKD84509 4072739 4073998 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase SH04_20125 AKD85170 4074053 4074307 - hypothetical_protein SH04_20130 AKD84510 4074467 4074760 - phospholipid_ABC_transporter_substrate-binding protein SH04_20135 AKD84511 4074760 4075395 - ABC_transporter_substrate-binding_protein SH04_20140 AKD85171 4075414 4075965 - phospholipid_ABC_transporter_substrate-binding protein SH04_20145 AKD84512 4075970 4076752 - ABC_transporter_permease SH04_20150 AKD84513 4076760 4077569 - ABC_transporter_ATP-binding_protein SH04_20155 AKD84514 4077779 4078756 + calcium/sodium:proton_antiporter SH04_20160 AKD84515 4078770 4079756 + D-arabinose_5-phosphate_isomerase SH04_20165 AKD84516 4079777 4080343 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase SH04_20170 AKD84517 4080340 4080915 + lipopolysaccharide_transporter SH04_20175 AKD84518 4080884 4081441 + lipopolysaccharide_transporter SH04_20180 AKD84519 4081448 4082173 + sugar_ABC_transporter_ATP-binding_protein SH04_20185 AKD84520 4082221 4083654 + RNA_polymerase_factor_sigma-54 SH04_20190 AKD84521 4083677 4083964 + ribosome_hibernation_promoting_factor_HPF SH04_20195 AKD84522 4084082 4084573 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) SH04_20200 AKD84523 4084619 4085473 + glmZ(sRNA)-inactivating_NTPase SH04_20205 AKD84524 4085470 4085742 + phosphohistidinoprotein-hexose phosphotransferase SH04_20210 AKD84525 4085956 4086588 + hypothetical_protein SH04_20215 AKD84526 4086856 4087836 - transposase SH04_20220 AKD84527 4087835 4088083 + hypothetical_protein SH04_20225 AKD84528 4088080 4088796 + hypothetical_protein SH04_20230 AKD84529 4088981 4090108 + hypothetical_protein SH04_20235 AKD84530 4090168 4090632 - hypothetical_protein SH04_20240 AKD84531 4090629 4091504 - N-acetylmannosamine_kinase SH04_20245 AKD84532 4091501 4092190 - N-acetylmannosamine-6-phosphate_2-epimerase SH04_20250 AKD84533 4092238 4093728 - sialic_acid_transporter SH04_20255 AKD84534 4093837 4094730 - N-acetylneuraminate_lyase SH04_20260 AKD84535 4094852 4095643 - transcriptional_regulator_NanR SH04_20265 AKD84536 4096023 4097390 + C4-dicarboxylate_transporter SH04_20270 AKD84537 4097433 4097930 - Clp_protease_ClpP SH04_20275 AKD84538 4097936 4098574 - stringent_starvation_protein_A sspA AKD84539 4098969 4099361 - 30S_ribosomal_protein_S9 SH04_20285 AKD84540 4099377 4099805 - 50S_ribosomal_protein_L13 SH04_20290 AKD84541 4100024 4101151 - hypothetical_protein SH04_20295 AKD84542 4101345 4101743 + hypothetical_protein SH04_20300 AKD84543 4101897 4103264 + serine_endoprotease_DegQ SH04_20305 AKD84544 4103354 4104421 + serine_endoprotease SH04_20310 AKD84545 4104484 4105422 - malate_dehydrogenase SH04_20315 AKD84546 4105857 4106327 + arginine_repressor SH04_20320 AKD84547 4106692 4106955 + membrane_protein SH04_20325 AKD84548 4107011 4107283 - hypothetical_protein SH04_20330 AKD84549 4107375 4109342 - p-hydroxybenzoic_acid_efflux_subunit_AaeB SH04_20335 AKD84550 4109348 4110280 - p-hydroxybenzoic_acid_efflux_subunit_AaeA SH04_20340 AKD85172 4110288 4110491 - transporter SH04_20345 AKD84551 4110674 4111603 + transcriptional_regulator SH04_20350 AKD84552 4111737 4113182 - protease_TldD tldD AKD84553 4113612 4117412 - hypothetical_protein SH04_20360 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKD84529 90 682 107.449856734 0.0 PJR32597.1 AKD84532 99 456 100.0 1e-160 PJR32599.1 AKD84534 100 611 100.0 0.0 PJR32600.1 AKD84535 99 536 100.0 0.0 >> 436. CP010442_0 Source: Escherichia coli K-12 strain ER3466, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: AKD80135 4122847 4123812 - membrane_protein SH06_20415 AKD80136 4123939 4124196 - 50S_ribosomal_protein_L27 rpmA AKD80137 4124217 4124528 - 50S_ribosomal_protein_L21 rplU AKD80138 4124787 4125758 + octaprenyl_diphosphate_synthase SH06_20430 AKD80139 4125986 4126264 + transcriptional_regulator SH06_20435 AKD80140 4126312 4127571 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase SH06_20440 AKD80810 4127626 4127880 - hypothetical_protein SH06_20445 AKD80141 4128040 4128333 - phospholipid_ABC_transporter_substrate-binding protein SH06_20450 AKD80142 4128333 4128968 - ABC_transporter_substrate-binding_protein SH06_20455 AKD80811 4128987 4129538 - phospholipid_ABC_transporter_substrate-binding protein SH06_20460 AKD80143 4129543 4130325 - ABC_transporter_permease SH06_20465 AKD80144 4130333 4131142 - ABC_transporter_ATP-binding_protein SH06_20470 AKD80145 4131352 4132329 + calcium/sodium:proton_antiporter SH06_20475 AKD80146 4132343 4133329 + D-arabinose_5-phosphate_isomerase SH06_20480 AKD80147 4133350 4133916 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase SH06_20485 AKD80148 4133913 4134488 + lipopolysaccharide_transporter SH06_20490 AKD80149 4134457 4135014 + lipopolysaccharide_transporter SH06_20495 AKD80150 4135021 4135746 + sugar_ABC_transporter_ATP-binding_protein SH06_20500 AKD80151 4135794 4137227 + RNA_polymerase_factor_sigma-54 SH06_20505 AKD80152 4137250 4137537 + ribosome_hibernation_promoting_factor_HPF SH06_20510 AKD80153 4137655 4138146 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) SH06_20515 AKD80154 4138192 4139046 + glmZ(sRNA)-inactivating_NTPase SH06_20520 AKD80155 4139043 4139315 + phosphohistidinoprotein-hexose phosphotransferase SH06_20525 AKD80156 4139529 4140161 + hypothetical_protein SH06_20530 AKD80157 4140429 4141409 - transposase SH06_20535 AKD80158 4141408 4141656 + hypothetical_protein SH06_20540 AKD80159 4141653 4142369 + hypothetical_protein SH06_20545 AKD80160 4142554 4143681 + hypothetical_protein SH06_20550 AKD80161 4143741 4144205 - hypothetical_protein SH06_20555 AKD80162 4144202 4145077 - N-acetylmannosamine_kinase SH06_20560 AKD80163 4145074 4145763 - N-acetylmannosamine-6-phosphate_2-epimerase SH06_20565 AKD80164 4145811 4147301 - sialic_acid_transporter SH06_20570 AKD80165 4147410 4148303 - N-acetylneuraminate_lyase SH06_20575 AKD80166 4148425 4149216 - transcriptional_regulator_NanR SH06_20580 AKD80167 4149596 4150963 + C4-dicarboxylate_transporter SH06_20585 AKD80168 4151006 4151503 - Clp_protease_ClpP SH06_20590 AKD80169 4151509 4152147 - stringent_starvation_protein_A sspA AKD80170 4152542 4152934 - 30S_ribosomal_protein_S9 SH06_20600 AKD80171 4152950 4153378 - 50S_ribosomal_protein_L13 SH06_20605 AKD80172 4153597 4154724 - hypothetical_protein SH06_20610 AKD80173 4154918 4155316 + hypothetical_protein SH06_20615 AKD80174 4155470 4156837 + serine_endoprotease_DegQ SH06_20620 AKD80175 4156927 4157994 + serine_endoprotease SH06_20625 AKD80176 4158057 4158995 - malate_dehydrogenase SH06_20630 AKD80177 4159430 4159900 + arginine_repressor SH06_20635 AKD80178 4160265 4160528 + membrane_protein SH06_20640 AKD80179 4160584 4160856 - hypothetical_protein SH06_20645 AKD80180 4160948 4162915 - p-hydroxybenzoic_acid_efflux_subunit_AaeB SH06_20650 AKD80181 4162921 4163853 - p-hydroxybenzoic_acid_efflux_subunit_AaeA SH06_20655 AKD80812 4163861 4164064 - transporter SH06_20660 AKD80182 4164247 4165176 + transcriptional_regulator SH06_20665 AKD80183 4165310 4166755 - protease_TldD tldD AKD80184 4167185 4170985 - hypothetical_protein SH06_20675 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKD80160 90 682 107.449856734 0.0 PJR32597.1 AKD80163 99 456 100.0 1e-160 PJR32599.1 AKD80165 100 611 100.0 0.0 PJR32600.1 AKD80166 99 536 100.0 0.0 >> 437. CP010441_0 Source: Escherichia coli K-12 strain ER3445, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: AKD75726 4070049 4071014 - membrane_protein SH03_20110 AKD75727 4071141 4071398 - 50S_ribosomal_protein_L27 rpmA AKD75728 4071419 4071730 - 50S_ribosomal_protein_L21 rplU AKD75729 4071989 4072960 + octaprenyl_diphosphate_synthase SH03_20125 AKD75730 4073188 4073466 + transcriptional_regulator SH03_20130 AKD75731 4073514 4074773 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase SH03_20135 AKD76388 4074828 4075082 - hypothetical_protein SH03_20140 AKD75732 4075242 4075535 - phospholipid_ABC_transporter_substrate-binding protein SH03_20145 AKD75733 4075535 4076170 - ABC_transporter_substrate-binding_protein SH03_20150 AKD76389 4076189 4076740 - phospholipid_ABC_transporter_substrate-binding protein SH03_20155 AKD75734 4076745 4077527 - ABC_transporter_permease SH03_20160 AKD75735 4077535 4078344 - ABC_transporter_ATP-binding_protein SH03_20165 AKD75736 4078554 4079531 + calcium/sodium:proton_antiporter SH03_20170 AKD75737 4079545 4080531 + D-arabinose_5-phosphate_isomerase SH03_20175 AKD75738 4080552 4081118 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase SH03_20180 AKD75739 4081115 4081690 + lipopolysaccharide_transporter SH03_20185 AKD75740 4081659 4082216 + lipopolysaccharide_transporter SH03_20190 AKD75741 4082223 4082948 + sugar_ABC_transporter_ATP-binding_protein SH03_20195 AKD75742 4082996 4084429 + RNA_polymerase_factor_sigma-54 SH03_20200 AKD75743 4084452 4084739 + ribosome_hibernation_promoting_factor_HPF SH03_20205 AKD75744 4084857 4085348 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) SH03_20210 AKD75745 4085394 4086248 + glmZ(sRNA)-inactivating_NTPase SH03_20215 AKD75746 4086245 4086517 + phosphohistidinoprotein-hexose phosphotransferase SH03_20220 AKD75747 4086731 4087363 + hypothetical_protein SH03_20225 AKD75748 4087631 4088611 - transposase SH03_20230 AKD75749 4088610 4088858 + hypothetical_protein SH03_20235 AKD75750 4088855 4089571 + hypothetical_protein SH03_20240 AKD75751 4089756 4090883 + hypothetical_protein SH03_20245 AKD75752 4090943 4091407 - hypothetical_protein SH03_20250 AKD75753 4091404 4092279 - N-acetylmannosamine_kinase SH03_20255 AKD75754 4092276 4092965 - N-acetylmannosamine-6-phosphate_2-epimerase SH03_20260 AKD75755 4093013 4094503 - sialic_acid_transporter SH03_20265 AKD75756 4094612 4095505 - N-acetylneuraminate_lyase SH03_20270 AKD75757 4095627 4096418 - transcriptional_regulator_NanR SH03_20275 AKD75758 4096798 4098165 + C4-dicarboxylate_transporter SH03_20280 AKD75759 4098208 4098705 - Clp_protease_ClpP SH03_20285 AKD75760 4098711 4099349 - stringent_starvation_protein_A sspA AKD75761 4099744 4100136 - 30S_ribosomal_protein_S9 SH03_20295 AKD75762 4100152 4100580 - 50S_ribosomal_protein_L13 SH03_20300 AKD75763 4100799 4101926 - hypothetical_protein SH03_20305 AKD75764 4102120 4102518 + hypothetical_protein SH03_20310 AKD75765 4102672 4104039 + serine_endoprotease_DegQ SH03_20315 AKD75766 4104129 4105196 + serine_endoprotease SH03_20320 AKD75767 4105259 4106197 - malate_dehydrogenase SH03_20325 AKD75768 4106632 4107102 + arginine_repressor SH03_20330 AKD75769 4107467 4107730 + membrane_protein SH03_20335 AKD75770 4107786 4108058 - hypothetical_protein SH03_20340 AKD75771 4108150 4110117 - p-hydroxybenzoic_acid_efflux_subunit_AaeB SH03_20345 AKD75772 4110123 4111055 - p-hydroxybenzoic_acid_efflux_subunit_AaeA SH03_20350 AKD76390 4111063 4111266 - transporter SH03_20355 AKD75773 4111449 4112378 + transcriptional_regulator SH03_20360 AKD75774 4112512 4113957 - protease_TldD tldD AKD75775 4114387 4118187 - hypothetical_protein SH03_20370 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKD75751 90 682 107.449856734 0.0 PJR32597.1 AKD75754 99 456 100.0 1e-160 PJR32599.1 AKD75756 100 611 100.0 0.0 PJR32600.1 AKD75757 99 536 100.0 0.0 >> 438. CP010440_0 Source: Escherichia coli K-12 strain ER3476, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: AKD71360 4083579 4084544 - membrane_protein SH08_20215 AKD71361 4084671 4084928 - 50S_ribosomal_protein_L27 rpmA AKD71362 4084949 4085260 - 50S_ribosomal_protein_L21 rplU AKD71363 4085519 4086490 + octaprenyl_diphosphate_synthase SH08_20230 AKD71364 4086718 4086996 + transcriptional_regulator SH08_20235 AKD71365 4087044 4088303 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase SH08_20240 AKD72024 4088358 4088612 - hypothetical_protein SH08_20245 AKD71366 4088772 4089065 - phospholipid_ABC_transporter_substrate-binding protein SH08_20250 AKD71367 4089065 4089700 - ABC_transporter_substrate-binding_protein SH08_20255 AKD72025 4089719 4090270 - phospholipid_ABC_transporter_substrate-binding protein SH08_20260 AKD71368 4090275 4091057 - ABC_transporter_permease SH08_20265 AKD71369 4091065 4091874 - ABC_transporter_ATP-binding_protein SH08_20270 AKD71370 4092084 4093061 + calcium/sodium:proton_antiporter SH08_20275 AKD71371 4093075 4094061 + D-arabinose_5-phosphate_isomerase SH08_20280 AKD71372 4094082 4094648 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase SH08_20285 AKD71373 4094645 4095220 + lipopolysaccharide_transporter SH08_20290 AKD71374 4095189 4095746 + lipopolysaccharide_transporter SH08_20295 AKD71375 4095753 4096478 + sugar_ABC_transporter_ATP-binding_protein SH08_20300 AKD71376 4096526 4097959 + RNA_polymerase_factor_sigma-54 SH08_20305 AKD71377 4097982 4098269 + ribosome_hibernation_promoting_factor_HPF SH08_20310 AKD71378 4098387 4098878 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) SH08_20315 AKD71379 4098924 4099778 + glmZ(sRNA)-inactivating_NTPase SH08_20320 AKD71380 4099775 4100047 + phosphohistidinoprotein-hexose phosphotransferase SH08_20325 AKD71381 4100261 4100893 + hypothetical_protein SH08_20330 AKD71382 4101161 4102141 - transposase SH08_20335 AKD71383 4102140 4102388 + hypothetical_protein SH08_20340 AKD71384 4102385 4103101 + hypothetical_protein SH08_20345 AKD71385 4103286 4104413 + hypothetical_protein SH08_20350 AKD71386 4104473 4104937 - hypothetical_protein SH08_20355 AKD71387 4104934 4105809 - N-acetylmannosamine_kinase SH08_20360 AKD71388 4105806 4106495 - N-acetylmannosamine-6-phosphate_2-epimerase SH08_20365 AKD71389 4106543 4108033 - sialic_acid_transporter SH08_20370 AKD71390 4108142 4109035 - N-acetylneuraminate_lyase SH08_20375 AKD71391 4109157 4109948 - transcriptional_regulator_NanR SH08_20380 AKD71392 4110328 4111695 + C4-dicarboxylate_transporter SH08_20385 AKD71393 4111738 4112235 - Clp_protease_ClpP SH08_20390 AKD71394 4112241 4112879 - stringent_starvation_protein_A sspA AKD71395 4113274 4113666 - 30S_ribosomal_protein_S9 SH08_20400 AKD71396 4113682 4114110 - 50S_ribosomal_protein_L13 SH08_20405 AKD71397 4114329 4115456 - hypothetical_protein SH08_20410 AKD72026 4115650 4116048 + hypothetical_protein SH08_20415 AKD71398 4116202 4117569 + serine_endoprotease_DegQ SH08_20420 AKD71399 4117659 4118726 + serine_endoprotease SH08_20425 AKD71400 4118789 4119727 - malate_dehydrogenase SH08_20430 AKD71401 4120162 4120632 + arginine_repressor SH08_20435 AKD71402 4120997 4121260 + membrane_protein SH08_20440 AKD71403 4121316 4121588 - hypothetical_protein SH08_20445 AKD71404 4121680 4123647 - p-hydroxybenzoic_acid_efflux_subunit_AaeB SH08_20450 AKD71405 4123653 4124585 - p-hydroxybenzoic_acid_efflux_subunit_AaeA SH08_20455 AKD72027 4124593 4124796 - transporter SH08_20460 AKD71406 4124979 4125908 + transcriptional_regulator SH08_20465 AKD71407 4126042 4127487 - protease_TldD tldD AKD71408 4127917 4131717 - hypothetical_protein SH08_20475 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKD71385 90 682 107.449856734 0.0 PJR32597.1 AKD71388 99 456 100.0 1e-160 PJR32599.1 AKD71390 100 611 100.0 0.0 PJR32600.1 AKD71391 99 536 100.0 0.0 >> 439. CP010439_0 Source: Escherichia coli K-12 strain ER3440, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: AKD67006 4066958 4067923 - membrane_protein SH02_20170 AKD67007 4068050 4068307 - 50S_ribosomal_protein_L27 rpmA AKD67008 4068328 4068639 - 50S_ribosomal_protein_L21 rplU AKD67009 4068898 4069869 + octaprenyl_diphosphate_synthase SH02_20185 AKD67010 4070097 4070375 + transcriptional_regulator SH02_20190 AKD67011 4070423 4071682 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase SH02_20195 AKD67669 4071737 4071991 - hypothetical_protein SH02_20200 AKD67012 4072151 4072444 - phospholipid_ABC_transporter_substrate-binding protein SH02_20205 AKD67013 4072444 4073079 - ABC_transporter_substrate-binding_protein SH02_20210 AKD67670 4073098 4073649 - phospholipid_ABC_transporter_substrate-binding protein SH02_20215 AKD67014 4073654 4074436 - ABC_transporter_permease SH02_20220 AKD67015 4074444 4075253 - ABC_transporter_ATP-binding_protein SH02_20225 AKD67016 4075463 4076440 + calcium/sodium:proton_antiporter SH02_20230 AKD67017 4076454 4077440 + D-arabinose_5-phosphate_isomerase SH02_20235 AKD67018 4077461 4078027 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase SH02_20240 AKD67019 4078024 4078599 + lipopolysaccharide_transporter SH02_20245 AKD67020 4078568 4079125 + lipopolysaccharide_transporter SH02_20250 AKD67021 4079132 4079857 + sugar_ABC_transporter_ATP-binding_protein SH02_20255 AKD67022 4079905 4081338 + RNA_polymerase_factor_sigma-54 SH02_20260 AKD67023 4081361 4081648 + ribosome_hibernation_promoting_factor_HPF SH02_20265 AKD67024 4081766 4082257 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) SH02_20270 AKD67025 4082303 4083157 + glmZ(sRNA)-inactivating_NTPase SH02_20275 AKD67026 4083154 4083426 + phosphohistidinoprotein-hexose phosphotransferase SH02_20280 AKD67027 4083640 4084272 + hypothetical_protein SH02_20285 AKD67028 4084540 4085520 - transposase SH02_20290 AKD67029 4085519 4085767 + hypothetical_protein SH02_20295 AKD67030 4085764 4086480 + hypothetical_protein SH02_20300 AKD67031 4086665 4087792 + hypothetical_protein SH02_20305 AKD67032 4087852 4088316 - hypothetical_protein SH02_20310 AKD67033 4088313 4089188 - N-acetylmannosamine_kinase SH02_20315 AKD67034 4089185 4089874 - N-acetylmannosamine-6-phosphate_2-epimerase SH02_20320 AKD67035 4089922 4091412 - sialic_acid_transporter SH02_20325 AKD67036 4091521 4092414 - N-acetylneuraminate_lyase SH02_20330 AKD67037 4092536 4093327 - transcriptional_regulator_NanR SH02_20335 AKD67038 4093707 4095074 + C4-dicarboxylate_transporter SH02_20340 AKD67039 4095117 4095614 - Clp_protease_ClpP SH02_20345 AKD67040 4095620 4096258 - stringent_starvation_protein_A sspA AKD67041 4096653 4097045 - 30S_ribosomal_protein_S9 SH02_20355 AKD67042 4097061 4097489 - 50S_ribosomal_protein_L13 SH02_20360 AKD67043 4097708 4098835 - hypothetical_protein SH02_20365 AKD67044 4099029 4099427 + hypothetical_protein SH02_20370 AKD67045 4099581 4100948 + serine_endoprotease_DegQ SH02_20375 AKD67046 4101038 4102105 + serine_endoprotease SH02_20380 AKD67047 4102168 4103106 - malate_dehydrogenase SH02_20385 AKD67048 4103541 4104011 + arginine_repressor SH02_20390 AKD67049 4104376 4104639 + membrane_protein SH02_20395 AKD67050 4104695 4104967 - hypothetical_protein SH02_20400 AKD67051 4105059 4107026 - p-hydroxybenzoic_acid_efflux_subunit_AaeB SH02_20405 AKD67052 4107032 4107964 - p-hydroxybenzoic_acid_efflux_subunit_AaeA SH02_20410 AKD67671 4107972 4108175 - transporter SH02_20415 AKD67053 4108358 4109287 + transcriptional_regulator SH02_20420 AKD67054 4109421 4110866 - protease_TldD tldD AKD67055 4111296 4115096 - hypothetical_protein SH02_20430 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKD67031 90 682 107.449856734 0.0 PJR32597.1 AKD67034 99 456 100.0 1e-160 PJR32599.1 AKD67036 100 611 100.0 0.0 PJR32600.1 AKD67037 99 536 100.0 0.0 >> 440. CP010438_0 Source: Escherichia coli K-12 strain ER3454, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: AKD62632 4082144 4083109 - membrane_protein SH05_20215 AKD62633 4083236 4083493 - 50S_ribosomal_protein_L27 rpmA AKD62634 4083514 4083825 - 50S_ribosomal_protein_L21 rplU AKD62635 4084084 4085055 + octaprenyl_diphosphate_synthase SH05_20230 AKD62636 4085283 4085561 + transcriptional_regulator SH05_20235 AKD62637 4085609 4086868 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase SH05_20240 AKD63301 4086923 4087177 - hypothetical_protein SH05_20245 AKD62638 4087337 4087630 - phospholipid_ABC_transporter_substrate-binding protein SH05_20250 AKD62639 4087630 4088265 - ABC_transporter_substrate-binding_protein SH05_20255 AKD63302 4088284 4088835 - phospholipid_ABC_transporter_substrate-binding protein SH05_20260 AKD62640 4088840 4089622 - ABC_transporter_permease SH05_20265 AKD62641 4089630 4090439 - ABC_transporter_ATP-binding_protein SH05_20270 AKD62642 4090649 4091626 + calcium/sodium:proton_antiporter SH05_20275 AKD62643 4091640 4092626 + D-arabinose_5-phosphate_isomerase SH05_20280 AKD62644 4092647 4093213 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase SH05_20285 AKD62645 4093210 4093785 + lipopolysaccharide_transporter SH05_20290 AKD62646 4093754 4094311 + lipopolysaccharide_transporter SH05_20295 AKD62647 4094318 4095043 + sugar_ABC_transporter_ATP-binding_protein SH05_20300 AKD62648 4095091 4096524 + RNA_polymerase_factor_sigma-54 SH05_20305 AKD62649 4096547 4096834 + ribosome_hibernation_promoting_factor_HPF SH05_20310 AKD62650 4096952 4097443 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) SH05_20315 AKD62651 4097489 4098343 + glmZ(sRNA)-inactivating_NTPase SH05_20320 AKD62652 4098340 4098612 + phosphohistidinoprotein-hexose phosphotransferase SH05_20325 AKD62653 4098826 4099458 + hypothetical_protein SH05_20330 AKD62654 4099726 4100706 - transposase SH05_20335 AKD62655 4100705 4100953 + hypothetical_protein SH05_20340 AKD62656 4100950 4101666 + hypothetical_protein SH05_20345 AKD62657 4101851 4102978 + hypothetical_protein SH05_20350 AKD62658 4103038 4103502 - hypothetical_protein SH05_20355 AKD62659 4103499 4104374 - N-acetylmannosamine_kinase SH05_20360 AKD62660 4104371 4105060 - N-acetylmannosamine-6-phosphate_2-epimerase SH05_20365 AKD62661 4105108 4106598 - sialic_acid_transporter SH05_20370 AKD62662 4106707 4107600 - N-acetylneuraminate_lyase SH05_20375 AKD62663 4107722 4108513 - transcriptional_regulator_NanR SH05_20380 AKD62664 4108893 4110260 + C4-dicarboxylate_transporter SH05_20385 AKD62665 4110303 4110800 - Clp_protease_ClpP SH05_20390 AKD62666 4110806 4111444 - stringent_starvation_protein_A sspA AKD62667 4111839 4112231 - 30S_ribosomal_protein_S9 SH05_20400 AKD62668 4112247 4112675 - 50S_ribosomal_protein_L13 SH05_20405 AKD62669 4112894 4114021 - hypothetical_protein SH05_20410 AKD62670 4114215 4114613 + hypothetical_protein SH05_20415 AKD62671 4114767 4116134 + serine_endoprotease_DegQ SH05_20420 AKD62672 4116224 4117291 + serine_endoprotease SH05_20425 AKD62673 4117354 4118292 - malate_dehydrogenase SH05_20430 AKD62674 4118727 4119197 + arginine_repressor SH05_20435 AKD62675 4119562 4119825 + membrane_protein SH05_20440 AKD62676 4119881 4120153 - hypothetical_protein SH05_20445 AKD62677 4120245 4122212 - p-hydroxybenzoic_acid_efflux_subunit_AaeB SH05_20450 AKD62678 4122218 4123150 - p-hydroxybenzoic_acid_efflux_subunit_AaeA SH05_20455 AKD63303 4123158 4123361 - transporter SH05_20460 AKD62679 4123544 4124473 + transcriptional_regulator SH05_20465 AKD62680 4124607 4126052 - protease_TldD tldD AKD62681 4126482 4130282 - hypothetical_protein SH05_20475 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKD62657 90 682 107.449856734 0.0 PJR32597.1 AKD62660 99 456 100.0 1e-160 PJR32599.1 AKD62662 100 611 100.0 0.0 PJR32600.1 AKD62663 99 536 100.0 0.0 >> 441. CP009685_0 Source: Escherichia coli str. K-12 substr. MG1655, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: AIZ89749 308130 309575 + protease_TldD tldD AIZ89750 309709 310638 - transcriptional_regulator EO53_01545 AIZ93676 310821 311024 + transporter EO53_01550 AIZ89751 311032 311964 + p-hydroxybenzoic_acid_efflux_subunit_AaeA EO53_01555 AIZ89752 311970 313937 + p-hydroxybenzoic_acid_efflux_subunit_AaeB EO53_01560 AIZ89753 314029 314301 + hypothetical_protein EO53_01565 AIZ89754 314357 314620 - membrane_protein EO53_01570 AIZ89755 314985 315455 - arginine_repressor EO53_01575 AIZ89756 315890 316828 + malate_dehydrogenase EO53_01580 AIZ89757 316891 317958 - serine_endoprotease EO53_01585 AIZ89758 318048 319415 - serine_endoprotease_DegQ EO53_01590 AIZ89759 319569 319967 - hypothetical_protein EO53_01595 AIZ89760 320161 321288 + hypothetical_protein EO53_01600 AIZ89761 321507 321935 + 50S_ribosomal_protein_L13 EO53_01605 AIZ89762 321951 322343 + 30S_ribosomal_protein_S9 EO53_01610 AIZ89763 322738 323376 + stringent_starvation_protein_A sspA AIZ89764 323382 323879 + Clp_protease_ClpP EO53_01620 AIZ89765 323922 325289 - C4-dicarboxylate_transporter EO53_01625 AIZ89766 325669 326460 + transcriptional_regulator_NanR EO53_01630 AIZ89767 326582 327475 + N-acetylneuraminate_lyase EO53_01635 AIZ89768 327584 329074 + sialic_acid_transporter EO53_01640 AIZ89769 329122 329811 + N-acetylmannosamine-6-phosphate_2-epimerase EO53_01645 AIZ89770 329808 330683 + N-acetylmannosamine_kinase EO53_01650 AIZ89771 330680 331144 + hypothetical_protein EO53_01655 AIZ89772 331204 332331 - hypothetical_protein EO53_01660 AIZ89773 332516 333232 - hypothetical_protein EO53_01665 AIZ89774 333229 333477 - hypothetical_protein EO53_01670 AIZ89775 333476 334456 + transposase EO53_01675 AIZ93677 334494 334607 - sugar_kinase EO53_01680 AIZ89776 334970 337186 - fimbrial_protein EO53_01690 AIZ89777 337371 338045 - fimbrial_chaperone_protein EO53_01695 AIZ89778 338217 338981 - gltF EO53_01700 AIZ89779 339541 340959 - glutamate_synthase EO53_01705 AIZ93678 340972 345432 - glutamate_synthase gltB AIZ93679 346107 347036 + hypothetical_protein EO53_01715 AIZ89780 347132 349468 + aerobic_respiration_control_sensor_protein_ArcB EO53_01720 AIZ89781 349698 350351 + isoprenoid_biosynthesis_protein EO53_01725 AIZ89782 350348 351076 + peptidoglycan_transglycosylase mtgA AIZ89783 351073 351705 - hypothetical_protein EO53_01735 AIZ89784 351919 352191 - phosphohistidinoprotein-hexose phosphotransferase EO53_01740 AIZ89785 352188 353042 - glmZ(sRNA)-inactivating_NTPase EO53_01745 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AIZ89772 90 682 107.449856734 0.0 PJR32597.1 AIZ89769 99 456 100.0 1e-160 PJR32599.1 AIZ89767 100 611 100.0 0.0 PJR32600.1 AIZ89766 99 536 100.0 0.0 >> 442. CP009644_0 Source: Escherichia coli ER2796, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: AIZ29654 3317067 3318032 - putative_inner_membrane_permease yhbE AIZ29655 3318159 3318416 - 50S_ribosomal_subunit_protein_L27 rpmA AIZ29657 3318437 3318748 - 50S_ribosomal_subunit_protein_L21 rplU AIZ29658 3319007 3319978 + octaprenyl_diphosphate_synthase ispB AIZ29659 3320206 3320484 + DNA-binding_transcriptional_activator_of_maltose metabolism sfsB AIZ29660 3320532 3321791 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA AIZ29661 3321846 3322100 - acid_stress_protein;_predicted_transcriptional regulator, BolA family ibaG AIZ29662 3322260 3322553 - ABC_transporter_maintaining_OM_lipid_asymmetry, cytoplasmic STAS component mlaB AIZ29663 3322553 3323188 - ABC_transporter_maintaining_OM_lipid_asymmetry, periplasmic binding protein mlaC AIZ29664 3323207 3323758 - ABC_transporter_maintaining_OM_lipid_asymmetry, anchored periplasmic binding protein mlaD AIZ29665 3323763 3324545 - ABC_transporter_maintaining_OM_lipid_asymmetry, inner membrane permease protein mlaE AIZ29666 3324553 3325362 - ABC_transporter_maintaining_OM_lipid_asymmetry, ATP-binding protein mlaF AIZ29667 3325572 3326549 + putative_calcium/sodium:proton_antiporter yrbG AIZ29668 3326563 3327549 + D-arabinose_5-phosphate_isomerase kdsD AIZ29669 3327570 3328136 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC AIZ29670 3328133 3328708 + lipopolysaccharide_export,_IM-tethered periplasmic protein of the LptBFGC export complex lptC AIZ29671 3328677 3329234 + periplasmic_LPS-binding_protein lptA AIZ29672 3329241 3329966 + lipopolysaccharide_export_ABC_transporter ATP-binding protein of the LptBFGC export complex lptB AIZ29673 3330014 3331447 + RNA_polymerase,_sigma_54_(sigma_N)_factor rpoN AIZ29674 3331470 3331757 + ribosome_hibernation_promoting_factor_HPF; stabilizes 70S dimers (100S) hpf AIZ29675 3331875 3332366 + sugar-specific_enzyme_IIA_component_of_PTS ptsN AIZ29676 3332412 3333266 + glmZ(sRNA)-inactivating_NTPase, glucosamine-6-phosphate regulated yhbJ AIZ29679 3333263 3333535 + phosphohistidinoprotein-hexose npr AIZ29680 3333749 3334381 + hypothetical_protein yrbL AIZ29681 3334649 3335665 - IS5_transposase_and_trans-activator insH1 AIZ29682 3335873 3336589 + putative_transcriptional_regulator yhcF AIZ29683 3336774 3337901 + hypothetical_protein yhcG AIZ29684 3337961 3338425 - hypothetical_protein yhcH AIZ29685 3338422 3339297 - N-acetylmannosamine_kinase nanK AIZ29686 3339294 3339983 - putative_N-acetylmannosamine-6-P_epimerase nanE AIZ29687 3340031 3341521 - sialic_acid_transporter nanT AIZ29689 3341630 3342523 - N-acetylneuraminate_lyase nanA AIZ29690 3342645 3343436 - DNA-binding_transcriptional_repressor_of_the_nan operon, induced by sialic acid nanR AIZ29691 3343816 3345183 + putative_transporter dcuD AIZ29692 3345226 3345723 - ClpXP_protease_specificity_enhancing_factor sspB AIZ29693 3345729 3346367 - stringent_starvation_protein_A sspA AIZ29694 3346762 3347154 - 30S_ribosomal_subunit_protein_S9 rpsI AIZ29695 3347170 3347598 - 50S_ribosomal_subunit_protein_L13 rplM AIZ29696 3347817 3348944 - conserved_protein_with_nucleoside_triphosphate hydrolase domain yhcM AIZ29697 3349138 3349536 + hypothetical_protein yhcB AIZ29698 3349690 3351057 + serine_endoprotease,_periplasmic degQ AIZ29700 3351147 3352214 + serine_endoprotease,_periplasmic degS AIZ29701 3352277 3353215 - malate_dehydrogenase,_NAD(P)-binding mdh AIZ29702 3353650 3354120 + DNA-binding_transcriptional_dual_regulator, L-arginine-binding argR AIZ29703 3354485 3354748 + hypothetical_protein yhcN AIZ29704 3354804 3355076 - putative_barnase_inhibitor yhcO AIZ29705 3355168 3357135 - p-hydroxybenzoic_acid_efflux_system_component aaeB AIZ29706 3357141 3358073 - p-hydroxybenzoic_acid_efflux_system_component aaeA AIZ29707 3358081 3358284 - membrane_protein_of_efflux_system aaeX AIZ29708 3358467 3359396 + transcriptional_regulator_for_aaeXAB_operon aaeR AIZ29709 3359530 3360975 - putative_peptidase tldD AIZ29711 3361405 3365205 - conserved_membrane_protein,_predicted transporter yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AIZ29683 90 682 107.449856734 0.0 PJR32597.1 AIZ29686 99 456 100.0 1e-160 PJR32599.1 AIZ29689 100 611 100.0 0.0 PJR32600.1 AIZ29690 99 536 100.0 0.0 >> 443. CP001637_0 Source: Escherichia coli DH1, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2285 Table of genes, locations, strands and annotations of subject cluster: ACX38150 491736 493181 + peptidase_U62_modulator_of_DNA_gyrase EcDH1_0462 ACX38151 493315 494244 - transcriptional_regulator,_LysR_family EcDH1_0463 ACX38152 494427 494630 + protein_of_unknown_function_DUF1656 EcDH1_0464 ACX38153 494638 495570 + efflux_transporter,_RND_family,_MFP_subunit EcDH1_0465 ACX38154 495576 497543 + Fusaric_acid_resistance_protein_conserved region EcDH1_0466 ACX38155 497635 497907 + Barstar_(barnase_inhibitor) EcDH1_0467 ACX38156 497963 498226 - protein_of_unknown_function_DUF1471 EcDH1_0468 ACX38157 498591 499061 - arginine_repressor,_ArgR EcDH1_0469 ACX38158 499496 500434 + malate_dehydrogenase,_NAD-dependent EcDH1_0470 ACX38159 500497 501564 - periplasmic_serine_protease_DegS EcDH1_0471 ACX38160 501654 503021 - protease_Do EcDH1_0472 ACX38161 503175 503573 - protein_of_unknown_function_DUF1043 EcDH1_0473 ACX38162 503767 504894 + AFG1-family_ATPase EcDH1_0474 ACX38163 505113 505541 + ribosomal_protein_L13 EcDH1_0475 ACX38164 505557 505949 + ribosomal_protein_S9 EcDH1_0476 ACX38165 506344 506982 + Glutathione_S-transferase_domain_protein EcDH1_0477 ACX38166 506988 507485 + Stringent_starvation_protein_B EcDH1_0478 ACX38167 507528 508895 - anaerobic_c4-dicarboxylate_antiporter,_DcuC family EcDH1_0479 ACX38168 509275 510066 + regulatory_protein_GntR_HTH EcDH1_0480 ACX38169 510188 511081 + N-acetylneuraminate_lyase EcDH1_0481 ACX38170 511190 512680 + sialic_acid_transporter EcDH1_0482 ACX38171 512728 513417 + N-acylglucosamine-6-phosphate_2-epimerase EcDH1_0483 ACX38172 513414 514289 + ROK_familiy_protein EcDH1_0484 ACX38173 514286 514750 + conserved_hypothetical_protein EcDH1_0485 ACX38174 514810 515937 - protein_of_unknown_function_DUF1016 EcDH1_0486 ACX38175 516122 516838 - protein_of_unknown_function_DUF1120 EcDH1_0487 ACX38176 516835 517056 - hypothetical_protein EcDH1_0488 ACX38177 517082 518062 + transposase_IS4_family_protein EcDH1_0489 ACX38178 518100 518579 - hypothetical_protein EcDH1_0490 ACX38179 518576 520957 - fimbrial_biogenesis_outer_membrane_usher protein EcDH1_0491 ACX38180 520978 521652 - Pili_assembly_chaperone,_N-terminal EcDH1_0492 ACX38181 521824 522588 - protein_of_unknown_function_DUF1120 EcDH1_0493 ACX38182 523148 524566 - glutamate_synthase,_small_subunit EcDH1_0494 ACX38183 524579 529132 - Glutamate_synthase_(ferredoxin) EcDH1_0495 ACX38184 529714 530643 + conserved_hypothetical_protein EcDH1_0496 ACX38185 530739 533075 + multi-sensor_hybrid_histidine_kinase EcDH1_0497 ACX38186 533305 533958 + ThiJ/PfpI_domain_protein EcDH1_0498 ACX38187 533955 534683 + monofunctional_biosynthetic_peptidoglycan transglycosylase EcDH1_0499 ACX38188 534680 535312 - conserved_hypothetical_protein EcDH1_0500 ACX38189 535526 535798 - phosphocarrier,_Hpr_family EcDH1_0501 ACX38190 535795 536649 - conserved_hypothetical_protein EcDH1_0502 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ACX38174 90 682 107.449856734 0.0 PJR32597.1 ACX38171 99 456 100.0 1e-160 PJR32599.1 ACX38169 100 611 100.0 0.0 PJR32600.1 ACX38168 99 536 100.0 0.0 >> 444. CP025753_0 Source: Escherichia coli strain CV839-06 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2276 Table of genes, locations, strands and annotations of subject cluster: AUP45059 2492970 2494415 + protease_TldD_putative_peptidase tldD AUP45060 2494543 2495454 - transcriptional_regulator CV83906_2471 AUP45061 2495586 2495858 + hypothetical_protein CV83906_2472 AUP45062 2495866 2496798 + hydroxybenzoic_acid_transporter aaeA AUP45063 2496804 2498771 + hydroxybenzoic_acid_transporter aaeB AUP45064 2498863 2499135 + hypothetical_protein CV83906_2475 AUP45065 2499191 2499454 - hypothetical_protein CV83906_2476 AUP45066 2499819 2500289 - arginine_repressor argR AUP45067 2500724 2501662 + malate_dehydrogenase mdh AUP45068 2501724 2502791 - serine_endoprotease hhoB AUP45069 2502881 2504248 - serine_endoprotease_DegQ degQ AUP45070 2504402 2504800 - hypothetical_protein CV83906_2481 AUP45071 2504994 2506121 + hypothetical_protein CV83906_2482 AUP45072 2506340 2506768 + 50S_ribosomal_protein_L13 CV83906_2483 AUP45073 2506784 2507176 + 30S_ribosomal_protein_S9 CV83906_2484 AUP45074 2507571 2508209 + stringent_starvation_protein_A sspA AUP45075 2508215 2508712 + peptidase_ClpXP_protease_specificity-enhancing factor sspB AUP45076 2508755 2510122 - C4-dicarboxylate_ABC_transporter CV83906_2487 AUP45077 2510511 2511293 + transcriptional_regulator CV83906_2488 AUP45078 2511415 2512308 + hypothetical_protein CV83906_2489 AUP45079 2512417 2513907 + MFS_transporter,_sialate:H+_symporter_family protein nanT AUP45080 2513955 2514644 + hypothetical_protein CV83906_2491 AUP45081 2514641 2515516 + N-acetylmannosamine_kinase nanK AUP45082 2515513 2515977 + hypothetical_protein CV83906_2493 AUP45083 2516037 2517164 - hypothetical_protein CV83906_2494 AUP45084 2517348 2518766 - glutamate_synthase gltD AUP45085 2518779 2523332 - glutamate_synthase_subunit_alpha gltB AUP45086 2523512 2523649 + hypothetical_protein CV83906_2497 AUP45087 2523914 2524843 + hypothetical_protein CV83906_2498 AUP45088 2524939 2527275 + aerobic_respiration_control_sensor_protein_ArcB arcB AUP45089 2527505 2528158 + isoprenoid_biosynthesis_protein CV83906_2500 AUP45090 2528155 2528883 + peptidoglycan_transglycosylase mtgA AUP45091 2528880 2529512 - hypothetical_protein CV83906_2502 AUP45092 2529726 2529998 - phosphohistidinoprotein-hexose phosphotransferase CV83906_2503 AUP45093 2529995 2530849 - glmZ(sRNA)-inactivating_NTPase CV83906_2504 AUP45094 2530895 2531386 - PTS_sugar_transporter_subunit_IIA CV83906_2505 AUP45095 2531504 2531791 - hypothetical_protein CV83906_2506 AUP45096 2531814 2533247 - RNA_polymerase_factor_sigma-54 CV83906_2507 AUP45097 2533295 2534020 - lipopolysaccharide_export_system_ATP-binding protein LptB lptB AUP45098 2534027 2534584 - sugar_ABC_transporter_substrate-binding_protein lptA AUP45099 2534553 2535128 - sugar_ABC_transporter_substrate-binding_protein lptC AUP45100 2535125 2535691 - kdsC kdsC AUP45101 2535712 2536698 - D-arabinose_5-phosphate_isomerase CV83906_2512 AUP45102 2536712 2537689 - sodium:proton_antiporter yrbG Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AUP45083 92 701 107.449856734 0.0 PJR32596.1 AUP45081 97 508 100.0 6e-179 PJR32597.1 AUP45080 99 456 100.0 1e-160 PJR32599.1 AUP45078 100 611 100.0 0.0 >> 445. CP030331_0 Source: Escherichia coli strain AR_452 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2275 Table of genes, locations, strands and annotations of subject cluster: AWZ68311 477364 478809 + modulator_of_DNA_gyrase_family_protein CSC39_0488 AWZ70618 478943 479872 - bacterial_regulatory_helix-turn-helix,_lysR family protein CSC39_0489 AWZ69552 480055 480258 + hypothetical_protein CSC39_0490 AWZ71969 480266 481198 + efflux_transporter,_RND_family,_MFP_subunit CSC39_0491 AWZ71564 481204 483171 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AWZ68913 483263 483535 + hypothetical_protein CSC39_0493 AWZ70271 483591 483854 - hypothetical_protein CSC39_0494 AWZ72117 484219 484689 - arginine_repressor argR AWZ68469 485124 486062 + malate_dehydrogenase,_NAD-dependent mdh AWZ68612 486125 487192 - periplasmic_serine_peptidase_DegS degS AWZ68685 487282 488649 - periplasmic_pH-dependent_serine_endoprotease DegQ degQ AWZ68195 488803 489201 - hypothetical_protein CSC39_0499 AWZ69306 489395 490522 + AFG1-like_ATPase_family_protein CSC39_0500 AWZ69532 490741 491169 + ribosomal_protein_L13 rplM AWZ70849 491185 491577 + 30S_ribosomal_protein_S9 rpsI AWZ68950 491972 492610 + glutathione_S-transferase,_N-terminal_domain protein CSC39_0503 AWZ70339 492616 493113 + stringent_starvation_protein_B sspB AWZ71062 493156 494484 - putative_cryptic_C4-dicarboxylate_transporter DcuD CSC39_0505 AWZ68242 494912 495694 + FCD_domain_protein CSC39_0506 AWZ70487 495816 496709 + N-acetylneuraminate_lyase nanA AWZ69382 496818 498308 + H+_symporter_family_protein CSC39_0508 AWZ71289 498356 499045 + putative_N-acetylmannosamine-6-phosphate 2-epimerase CSC39_0509 AWZ71480 499042 499917 + N-acetylmannosamine_kinase nanK AWZ70762 499914 500378 + hypothetical_protein CSC39_0511 AWZ70717 500438 501565 - hypothetical_protein CSC39_0512 AWZ71175 501749 503167 - glutamate_synthase_[NADPH]_small_chain gltD AWZ68228 503180 507733 - conserved_region_in_glutamate_synthase_family protein CSC39_0514 AWZ70750 507913 508050 + hypothetical_protein CSC39_0515 AWZ71587 508315 509244 + radical_SAM_superfamily_protein CSC39_0516 AWZ70942 509340 511676 + aerobic_respiration_control_sensor_protein_ArcB arcB AWZ68828 511906 512559 + enhancing_lycopene_biosynthesis_protein_2 elbB AWZ68955 512556 513284 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AWZ69896 513281 513913 - phoP_regulatory_network_YrbL_family_protein CSC39_0520 AWZ69379 514127 514339 - phosphocarrier_protein_NPr ptsO AWZ70473 514396 515250 - hypothetical_protein CSC39_0522 AWZ70465 515296 515787 - PTS_IIA-like_nitrogen-regulatory_protein_PtsN ptsN AWZ70690 515905 516192 - ribosome_hibernation_promoting_factor hpf AWZ68437 516215 517648 - RNA_polymerase_sigma-54_factor rpoN AWZ71769 517696 518421 - lipopolysaccharide_export_system_ATP-binding protein LptB lptB AWZ71704 518428 518985 - lipopolysaccharide_transport_periplasmic_protein LptA lptA AWZ69267 518954 519529 - lipopolysaccharide_export_system_protein_LptC lptC AWZ68655 519526 520092 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC AWZ69375 520113 521099 - arabinose_5-phosphate_isomerase_KdsD kdsD AWZ71243 521113 522090 - inner_membrane_protein_YrbG yrbG Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AWZ70717 91 699 107.449856734 0.0 PJR32596.1 AWZ71480 97 509 100.0 2e-179 PJR32597.1 AWZ71289 99 456 100.0 1e-160 PJR32599.1 AWZ70487 100 611 100.0 0.0 >> 446. CP032515_0 Source: Escherichia coli strain 118UI chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2272 Table of genes, locations, strands and annotations of subject cluster: AYE17601 3815210 3816196 + arabinose-5-phosphate_isomerase_KdsD kdsD AYE17602 3816217 3816783 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC AYE17603 3816780 3817355 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AYE17604 3817324 3817881 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA AYE17605 3817888 3818613 + ABC_transporter_ATP-binding_protein Eco118UI_19325 AYE17606 3818661 3820094 + RNA_polymerase_sigma-54_factor Eco118UI_19330 AYE17607 3820117 3820404 + ribosome_hibernation_promoting_factor Eco118UI_19335 AYE17608 3820522 3821013 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN AYE17609 3821059 3821913 + RNase_adaptor_protein_RapZ Eco118UI_19345 AYE17610 3821910 3822182 + phosphocarrier_protein_NPr Eco118UI_19350 AYE17611 3822395 3823027 + PhoP_regulatory_network_protein_YrbL yrbL AYE17612 3823024 3823752 - monofunctional_biosynthetic_peptidoglycan transglycosylase Eco118UI_19360 AYE17613 3823749 3824402 - glutamine_amidotransferase Eco118UI_19365 AYE17614 3824632 3826968 - hybrid_sensor_histidine_kinase/response regulator Eco118UI_19370 AYE18976 3827064 3827993 - TIGR01212_family_radical_SAM_protein Eco118UI_19375 AYE17615 3828669 3833129 + glutamate_synthase_large_subunit Eco118UI_19380 AYE17616 3833142 3834560 + glutamate_synthase_small_subunit Eco118UI_19385 AYE17617 3834744 3835871 + DUF1016_domain-containing_protein Eco118UI_19390 AYE17618 3835931 3836395 - YhcH/YjgK/YiaL_family_protein Eco118UI_19395 AYE17619 3836392 3837267 - ROK_family_protein Eco118UI_19400 AYE17620 3837264 3837953 - N-acetylmannosamine-6-phosphate_2-epimerase Eco118UI_19405 AYE17621 3838001 3839491 - MFS_transporter Eco118UI_19410 AYE17622 3839600 3840493 - N-acetylneuraminate_lyase nanA AYE17623 3840616 3841407 - transcriptional_regulator_NanR Eco118UI_19420 AYE17624 3841787 3843154 + C4-dicarboxylate_transporter_DcuC dcuC AYE17625 3843198 3843695 - stringent_starvation_protein_B Eco118UI_19430 AYE17626 3843701 3844339 - stringent_starvation_protein_A Eco118UI_19435 AYE17627 3844595 3844816 + hypothetical_protein Eco118UI_19440 AYE17628 3844734 3845126 - 30S_ribosomal_protein_S9 Eco118UI_19445 AYE17629 3845142 3845570 - 50S_ribosomal_protein_L13 Eco118UI_19450 AYE17630 3845789 3846916 - cell_division_protein_ZapE zapE AYE17631 3847110 3847508 + DUF1043_family_protein Eco118UI_19460 AYE17632 3847662 3849029 + periplasmic_pH-dependent_serine_endoprotease DegQ Eco118UI_19465 AYE17633 3849119 3850186 + outer_membrane-stress_sensor_serine endopeptidase DegS Eco118UI_19470 AYE17634 3850249 3851187 - malate_dehydrogenase Eco118UI_19475 AYE17635 3851622 3852092 + transcriptional_regulator_ArgR argR AYE17636 3852457 3852720 + DUF1471_domain-containing_protein Eco118UI_19485 AYE17637 3852776 3853048 - hypothetical_protein Eco118UI_19490 AYE17638 3853140 3855107 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AYE17639 3855113 3856045 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AYE17640 3856053 3856256 - protein_AaeX Eco118UI_19505 AYE17641 3856439 3857368 + HTH-type_transcriptional_activator_AaeR aaeR AYE17642 3857496 3858941 - metalloprotease_TldD tldD AYE17643 3859097 3862897 - AsmA2_domain-containing_protein Eco118UI_19520 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AYE17617 91 698 107.449856734 0.0 PJR32596.1 AYE17619 97 507 100.0 8e-179 PJR32597.1 AYE17620 99 456 100.0 1e-160 PJR32599.1 AYE17622 100 611 100.0 0.0 >> 447. CP023142_0 Source: Escherichia coli strain CFSAN061770 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2272 Table of genes, locations, strands and annotations of subject cluster: ASX04209 531802 533247 + metalloprotease_TldD CA696_002755 ASX04210 533375 534304 - HTH-type_transcriptional_activator_AaeR CA696_002760 ASX04211 534487 534690 + protein_AaeX CA696_002765 ASX04212 534698 535630 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CA696_002770 ASX04213 535636 537603 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CA696_002775 ASX04214 537695 537967 + hypothetical_protein CA696_002780 ASX04215 538023 538286 - hypothetical_protein CA696_002785 ASX04216 538651 539121 - arginine_repressor CA696_002790 ASX04217 539556 540494 + malate_dehydrogenase CA696_002795 ASX04218 540557 541624 - outer_membrane-stress_sensor_serine endopeptidase DegS CA696_002800 ASX04219 541714 543081 - periplasmic_pH-dependent_serine_endoprotease DegQ CA696_002805 ASX04220 543235 543633 - hypothetical_protein CA696_002810 ASX04221 543827 544954 + cell_division_protein_ZapE CA696_002815 ASX04222 545173 545601 + 50S_ribosomal_protein_L13 CA696_002820 ASX04223 545617 546009 + 30S_ribosomal_protein_S9 CA696_002825 ASX04224 545927 546148 - hypothetical_protein CA696_002830 ASX08675 546122 546301 + hypothetical_protein CA696_002835 ASX08674 546253 546462 - hypothetical_protein CA696_002840 ASX04225 546404 547042 + stringent_starvation_protein_A CA696_002845 ASX04226 547048 547545 + stringent_starvation_protein_B CA696_002850 ASX04227 547589 548956 - C4-dicarboxylate_transporter CA696_002855 CA696_002860 548969 549067 + glycosyl_transferase no_locus_tag CA696_002865 549024 549721 + IS1_family_transposase no_locus_tag ASX04228 549852 550643 + transcriptional_regulator_NanR CA696_002870 ASX04229 550766 551659 + N-acetylneuraminate_lyase nanA ASX04230 551768 553258 + MFS_transporter CA696_002880 ASX04231 553306 553995 + N-acetylmannosamine-6-phosphate_2-epimerase CA696_002885 ASX04232 553992 554867 + N-acetylmannosamine_kinase CA696_002890 ASX04233 554864 555328 + YhcH/YjgK/YiaL_family_protein CA696_002895 ASX04234 555388 556515 - DUF1016_domain-containing_protein CA696_002900 ASX04235 556699 558117 - glutamate_synthase_small_subunit CA696_002905 ASX04236 558130 562590 - glutamate_synthase_large_subunit CA696_002910 CA696_002915 562513 562739 + hypothetical_protein no_locus_tag ASX04237 562637 562873 + hypothetical_protein CA696_002920 ASX08676 563265 564194 + TIGR01212_family_radical_SAM_protein CA696_002925 ASX04238 564290 566626 + hybrid_sensor_histidine_kinase/response regulator CA696_002930 ASX04239 566856 567509 + glutamine_amidotransferase CA696_002935 ASX04240 567506 568234 + monofunctional_biosynthetic_peptidoglycan transglycosylase CA696_002940 ASX04241 568231 568863 - hypothetical_protein CA696_002945 ASX04242 569076 569348 - phosphocarrier_protein_NPr CA696_002950 ASX04243 569345 570199 - RNase_adaptor_protein_RapZ CA696_002955 ASX04244 570245 570736 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN CA696_002960 ASX04245 570854 571141 - ribosome_hibernation_promoting_factor CA696_002965 ASX04246 571164 572597 - RNA_polymerase_sigma-54_factor CA696_002970 ASX04247 572645 573370 - ABC_transporter_ATP-binding_protein lptB ASX04248 573377 573934 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA CA696_002980 ASX04249 573903 574478 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC ASX04250 574475 575041 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC CA696_002990 ASX04251 575062 576048 - arabinose-5-phosphate_isomerase_KdsD CA696_002995 ASX04252 576062 577039 - calcium/sodium_antiporter CA696_003000 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ASX04234 91 698 107.449856734 0.0 PJR32596.1 ASX04232 97 507 100.0 8e-179 PJR32597.1 ASX04231 99 456 100.0 1e-160 PJR32599.1 ASX04229 100 611 100.0 0.0 >> 448. CP007491_0 Source: Escherichia coli strain ACN002, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2272 Table of genes, locations, strands and annotations of subject cluster: ALY14746 3446004 3446990 + D-arabinose_5-phosphate_isomerase kdsD ALY14747 3447011 3447577 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase yrbI ALY14748 3447574 3448149 + lipopolysaccharide_export_system_protein_lptC ACN002_3290 ALY14749 3448118 3448675 + lipopolysaccharide_transport_periplasmic_protein LptA yhbN ALY14750 3448682 3449407 + ABC_transporter_ATP-binding_protein yhbG ALY14751 3449455 3450888 + RNA_polymerase_factor_sigma-54 rpoN ALY14752 3450911 3451198 + sigma(54)_modulation_protein yhbH ALY14753 3451292 3451807 + PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN ALY14754 3451853 3452707 + hypothetical_protein ACN002_3296 ALY14755 3452704 3452976 + phosphohistidinoprotein-hexose ptsO ALY14756 3453190 3453822 + hypothetical_protein ACN002_3298 ALY14757 3453819 3454547 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA ALY14758 3454544 3455197 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL ALY14759 3455427 3457763 - aerobic_respiration_control_sensor_protein_ArcB arcB ALY14760 3457859 3458788 - Fe-S_oxidoreductase yhcC ALY14761 3459053 3459190 - hypothetical_protein ACN002_3303 ALY14762 3459355 3463923 + glutamate_synthase_subunit_alpha gltB ALY14763 3463936 3465354 + glutamate_synthase_subunit_beta gltD ALY14764 3465538 3466665 + hypothetical_protein ACN002_3306 ALY14765 3466725 3467189 - hypothetical_protein ACN002_3307 ALY14766 3467186 3468061 - N-acetylmannosamine_kinase nanK ALY14767 3468058 3468747 - N-acetylmannosamine-6-phosphate_2-epimerase nanE ALY14768 3468795 3470315 - sialic_acid_transporter nanT ALY14769 3470394 3471287 - N-acetylneuraminate_lyase nanA ALY14770 3471409 3472191 - transcriptional_regulator_NanR nanR ALY14771 3472580 3473947 + C4-dicarboxylate_transporter_DcuC dcuC ALY14772 3473990 3474487 - ClpXP_protease_specificity-enhancing_factor sspB ALY14773 3474493 3475131 - stringent_starvation_protein_A sspA ALY14774 3475526 3475918 - 30S_ribosomal_protein_S9 rpsI ALY14775 3475934 3476362 - 50S_ribosomal_protein_L13 rplM ALY14776 3476581 3477708 - hypothetical_protein ACN002_3318 ALY14777 3477902 3478300 + cytochrome_d_ubiquinol_oxidase_subunit_III ACN002_3319 ALY14778 3478454 3479821 + serine_endoprotease degQ ALY14779 3479911 3480978 + serine_endoprotease degS ALY14780 3481040 3481978 - malate_dehydrogenase mdh ALY14781 3482413 3482883 + arginine_repressor argR ALY14782 3483248 3483511 + hypothetical_protein ACN002_3324 ALY14783 3483567 3483839 - hypothetical_protein ACN002_3325 ALY14784 3483931 3485898 - p-hydroxybenzoic_acid_efflux_subunit_AaeB yhcP ALY14785 3485904 3486836 - p-hydroxybenzoic_acid_efflux_subunit_AaeA yhcQ ALY14786 3486844 3487047 - hypothetical_protein ACN002_3328 ALY14787 3487230 3488159 + DNA-binding_transcriptional_regulator aaeR ALY14788 3488287 3489732 - protease_TldD tldD ALY14789 3489888 3493688 - hypothetical_protein ACN002_3331 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ALY14764 91 697 107.449856734 0.0 PJR32596.1 ALY14766 97 508 100.0 6e-179 PJR32597.1 ALY14767 99 456 100.0 1e-160 PJR32599.1 ALY14769 100 611 100.0 0.0 >> 449. CP007442_0 Source: Escherichia coli ACN001, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2272 Table of genes, locations, strands and annotations of subject cluster: AKP86178 3531341 3532327 + D-arabinose_5-phosphate_isomerase kdsD AKP86179 3532348 3532914 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase yrbI AKP86180 3532911 3533486 + lipopolysaccharide_export_system_protein_lptC J444_3501 AKP86181 3533455 3534012 + lipopolysaccharide_transport_periplasmic_protein LptA yhbN AKP86182 3534019 3534744 + ABC_transporter_ATP-binding_protein yhbG AKP86183 3534792 3536225 + RNA_polymerase_factor_sigma-54 rpoN AKP86184 3536248 3536535 + sigma(54)_modulation_protein yhbH AKP86185 3536653 3537144 + sugar-specific_enzyme_IIA_component_of_PTS J444_3506 AKP86186 3537190 3538044 + hypothetical_protein J444_3507 AKP86187 3538041 3538313 + phosphohistidinoprotein-hexose ptsO AKP86188 3538527 3539159 + hypothetical_protein J444_3509 AKP86189 3539156 3539884 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AKP86190 3539881 3540534 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL AKP86191 3540764 3543100 - aerobic_respiration_control_sensor_protein_ArcB arcB AKP86192 3543196 3544125 - Fe-S_oxidoreductase yhcC AKP86193 3544390 3544527 - hypothetical_protein J444_3514 AKP86194 3544707 3549260 + glutamate_synthase_(NADPH),_large_subunit J444_3515 AKP86195 3549273 3550691 + glutamate_synthase_subunit_beta gltD AKP86196 3550875 3552002 + hypothetical_protein J444_3517 AKP86197 3552062 3552526 - hypothetical_protein J444_3518 AKP86198 3552523 3553398 - N-acetylmannosamine_kinase nanK AKP86199 3553395 3554084 - N-acetylmannosamine-6-phosphate_2-epimerase nanE AKP86200 3554132 3555622 - putative_sialic_acid_transporter J444_3521 AKP86201 3555731 3556624 - N-acetylneuraminate_lyase nanA AKP86202 3556746 3557528 - transcriptional_regulator_NanR nanR AKP86203 3557917 3559284 + C4-dicarboxylate_transporter_DcuC dcuC AKP86204 3559327 3559824 - ClpXP_protease_specificity-enhancing_factor sspB AKP86205 3559830 3560468 - stringent_starvation_protein_A sspA AKP86206 3560863 3561255 - 30S_ribosomal_protein_S9 rpsI AKP86207 3561271 3561699 - 50S_ribosomal_protein_L13 rplM AKP86208 3561918 3563045 - hypothetical_protein J444_3529 AKP86209 3563239 3563637 + cytochrome_d_ubiquinol_oxidase_subunit_III J444_3530 AKP86210 3563791 3565158 + serine_endoprotease degQ AKP86211 3565248 3566315 + serine_endoprotease degS AKP86212 3566377 3567315 - malate_dehydrogenase mdh AKP86213 3567750 3568220 + arginine_repressor argR AKP86214 3568585 3568848 + hypothetical_protein J444_3535 AKP86215 3568904 3569176 - hypothetical_protein J444_3536 AKP86216 3569268 3571235 - p-hydroxybenzoic_acid_efflux_subunit_AaeB yhcP AKP86217 3571241 3572173 - p-hydroxybenzoic_acid_efflux_subunit_AaeA yhcQ AKP86218 3572181 3572453 - protein_AaeX J444_3539 AKP86219 3572585 3573496 + DNA-binding_transcriptional_regulator aaeR AKP86220 3573624 3575069 - protease_TldD tldD AKP86221 3575225 3578977 - hypothetical_protein J444_3542 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AKP86196 91 697 107.449856734 0.0 PJR32596.1 AKP86198 97 508 100.0 6e-179 PJR32597.1 AKP86199 99 456 100.0 1e-160 PJR32599.1 AKP86201 100 611 100.0 0.0 >> 450. MG591698_0 Source: Escherichia coli strain PN43 plasmid unnamed, complete sequence. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2271 Table of genes, locations, strands and annotations of subject cluster: AUR80481 290645 291631 + Arabinose_5-phosphate_isomerase no_locus_tag AUR80578 291652 292218 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase no_locus_tag AUR80577 292215 292790 + YrbK yrbK AUR80581 292759 293316 + LptA,_protein_essential_for_LPS_transport_across the periplasm lptA AUR80547 293323 294048 + Lipopolysaccharide_ABC_transporter,_ATP-binding protein LptB lptB AUR80406 294096 295529 + RNA_polymerase_sigma-54_factor_RpoN rpoN AUR80655 295552 295839 + Ribosome_hibernation_protein_YhbH yhbH AUR80596 295957 296448 + PTS_system_nitrogen-specific_IIA_component, PtsN ptsN AUR80517 296494 297348 + Hypothetical_ATP-binding_protein_UPF0042, contains P-loop no_locus_tag AUR80660 297345 297617 + Phosphocarrier_protein,_nitrogen_regulation associated no_locus_tag AUR80564 297831 298463 + Putative_uncharacterized_protein_YrbL yrbL AUR80546 298460 299188 - Monofunctional_biosynthetic_peptidoglycan transglycosylase no_locus_tag AUR80560 299185 299838 - Sigma_cross-reacting_protein_27A no_locus_tag AUR80366 300068 302404 - Aerobic_respiration_control_sensor_protein_arcB arcB AUR80495 302500 303429 - putative_Fe-S_oxidoreductase no_locus_tag AUR80687 303694 303831 - hypothetical_protein no_locus_tag AUR80356 303996 308564 + Glutamate_synthase_[NADPH]_large_chain no_locus_tag AUR80409 308577 309995 + Glutamate_synthase_[NADPH]_small_chain no_locus_tag AUR80456 310179 311306 + Putative_uncharacterized_protein_YhcG yhcG AUR80614 311366 311830 - Putative_sugar_isomerase_involved_in_processing of exogenous sialic acid no_locus_tag AUR80513 311827 312702 - N-acetylmannosamine_kinase no_locus_tag AUR80554 312699 313388 - N-acetylmannosamine-6-phosphate_2-epimerase no_locus_tag AUR80394 313436 314926 - Sialic_acid_transporter_(permease)_NanT nanT AUR80506 315035 315928 - N-acetylneuraminate_lyase no_locus_tag AUR80534 316050 316832 - Transcriptional_regulator_NanR nanR AUR80412 317221 318588 + Putative_cryptic_C4-dicarboxylate_transporter DcuD dcuD AUR80593 318631 319128 - ClpXP_protease_specificity-enhancing_factor_/ Stringent starvation protein B no_locus_tag AUR80562 319134 319772 - Stringent_starvation_protein_A no_locus_tag AUR80627 320167 320559 - SSU_ribosomal_protein_S9p_(S16e) s9 AUR80618 320575 321003 - LSU_ribosomal_protein_L13p_(L13Ae) l13 AUR80457 321222 322349 - ATPase,_AFG1_family no_locus_tag AUR80624 322543 322941 + Putative_cytochrome_d_ubiquinol_oxidase_subunit III no_locus_tag AUR80413 323095 324462 + Outer_membrane_stress_sensor_protease_DegQ, serine protease degQ AUR80466 324552 325619 + Outer_membrane_stress_sensor_protease_DegS degS AUR80492 325681 326619 - Malate_dehydrogenase no_locus_tag AUR80611 327054 327524 + Arginine_pathway_regulatory_protein_ArgR, repressor of arg regulon argR AUR80664 327889 328152 + putative_exported_protein no_locus_tag AUR80661 328208 328480 - putative_ribonuclease_inhibitor no_locus_tag AUR80376 328572 330539 - FUSARIC_ACID_RESISTANCE_PROTEIN_FusB_/_FUSARIC ACID RESISTANCE PROTEIN FusC fusB AUR80494 330545 331477 - Membrane_fusion_component_of_tripartite multidrug resistance system no_locus_tag AUR80677 331485 331688 - putative_membrane_protein no_locus_tag AUR80496 331871 332800 + LysR_family_transcriptional_regulator_QseA qseA AUR80402 332928 334373 - TldD_protein,_part_of_TldE/TldD_proteolytic complex tldD AUR80357 334529 338281 - putative_exported_protein no_locus_tag Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AUR80456 91 696 107.449856734 0.0 PJR32596.1 AUR80513 97 508 100.0 6e-179 PJR32597.1 AUR80554 99 456 100.0 1e-160 PJR32599.1 AUR80506 100 611 100.0 0.0 >> 451. CP029492_0 Source: Escherichia coli strain HS30-1 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2183 Table of genes, locations, strands and annotations of subject cluster: AWU89035 484094 485539 + metalloprotease_TldD DKQ63_02530 AWU89036 485673 486602 - HTH-type_transcriptional_activator_AaeR DKQ63_02535 AWU89037 486785 486988 + protein_AaeX DKQ63_02540 AWU89038 486996 487928 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DKQ63_02545 AWU89039 487934 489901 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DKQ63_02550 AWU89040 489993 490265 + hypothetical_protein DKQ63_02555 AWU92599 490321 490584 - DUF1471_domain-containing_protein DKQ63_02560 AWU89041 490949 491419 - arginine_repressor DKQ63_02565 AWU89042 491854 492792 + malate_dehydrogenase DKQ63_02570 AWU89043 492855 493922 - outer_membrane-stress_sensor_serine endopeptidase DegS DKQ63_02575 AWU89044 494012 495379 - periplasmic_pH-dependent_serine_endoprotease DegQ DKQ63_02580 AWU92600 495533 495931 - DUF1043_domain-containing_protein DKQ63_02585 AWU89045 496125 497252 + cell_division_protein_ZapE DKQ63_02590 AWU89046 497471 497899 + 50S_ribosomal_protein_L13 DKQ63_02595 AWU89047 497915 498307 + 30S_ribosomal_protein_S9 DKQ63_02600 AWU92601 498551 498760 - hypothetical_protein DKQ63_02605 AWU89048 498702 499340 + stringent_starvation_protein_A DKQ63_02610 AWU89049 499346 499843 + stringent_starvation_protein_B DKQ63_02615 AWU89050 499885 501252 - C4-dicarboxylate_transporter_DcuC DKQ63_02620 DKQ63_02625 501252 501362 + transposase no_locus_tag AWU89051 501632 502423 + transcriptional_regulator_NanR nanR AWU89052 502545 503438 + N-acetylneuraminate_lyase nanA DKQ63_02640 503548 505037 + MFS_transporter no_locus_tag AWU89053 505085 505774 + N-acetylmannosamine-6-phosphate_2-epimerase DKQ63_02645 AWU89054 505771 506646 + N-acetylmannosamine_kinase DKQ63_02650 AWU89055 506643 507107 + YhcH/YjgK/YiaL_family_protein DKQ63_02655 AWU89056 507167 508294 - DUF1016_domain-containing_protein DKQ63_02660 AWU89057 508479 509195 - DUF1120_domain-containing_protein DKQ63_02665 AWU89058 509192 509737 - hypothetical_protein DKQ63_02670 AWU89059 509734 512115 - fimbrial_protein DKQ63_02675 AWU89060 512136 512810 - fimbrial_chaperone_protein DKQ63_02680 AWU89061 512982 513746 - glutamate_synthase_operon_protein_GltF DKQ63_02685 AWU89062 513867 514151 - hypothetical_protein DKQ63_02690 AWU89063 514306 515724 - glutamate_synthase DKQ63_02695 AWU89064 515737 520197 - glutamate_synthase_large_subunit DKQ63_02700 DKQ63_02705 520120 520346 + hypothetical_protein no_locus_tag AWU89065 520244 520450 + hypothetical_protein DKQ63_02710 AWU92602 520872 521801 + TIGR01212_family_radical_SAM_protein DKQ63_02715 AWU89066 521897 524233 + hybrid_sensor_histidine_kinase/response regulator DKQ63_02720 AWU89067 524463 525116 + glutamine_amidotransferase DKQ63_02725 AWU89068 525113 525841 + monofunctional_biosynthetic_peptidoglycan transglycosylase DKQ63_02730 AWU89069 525838 526470 - protein_YrbL yrbL AWU89070 526684 526956 - phosphocarrier_protein_NPr DKQ63_02740 AWU89071 526953 527807 - RNase_adaptor_protein_RapZ DKQ63_02745 AWU89072 527853 528344 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN DKQ63_02750 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AWU89056 90 684 107.449856734 0.0 PJR32596.1 AWU89054 97 507 100.0 1e-178 PJR32597.1 AWU89053 99 456 100.0 1e-160 PJR32600.1 AWU89051 99 536 100.0 0.0 >> 452. CP048647_0 Source: Escherichia coli strain GW-AmxH19 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2057 Table of genes, locations, strands and annotations of subject cluster: QIB93460 522160 523605 + metalloprotease_TldD tldD QIB93461 523733 524662 - HTH-type_transcriptional_activator_AaeR aaeR QIB93462 524845 525048 + AaeX_family_protein G3273_02540 QIB93463 525056 525988 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QIB93464 525994 527961 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIB93465 528053 528325 + hypothetical_protein G3273_02555 QIB93466 528380 528643 - peroxide/acid_stress_response_protein_YhcN yhcN QIB93467 529007 529477 - transcriptional_regulator_ArgR argR QIB93468 529912 530850 + malate_dehydrogenase mdh QIB93469 530913 531980 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QIB93470 532070 533437 - serine_endoprotease_DegQ degQ QIB93471 533591 533989 - DUF1043_family_protein G3273_02585 QIB93472 534172 535299 + cell_division_protein_ZapE G3273_02590 QIB93473 535519 535947 + 50S_ribosomal_protein_L13 rplM QIB93474 535963 536355 + 30S_ribosomal_protein_S9 rpsI QIB93475 536750 537388 + stringent_starvation_protein_A sspA QIB93476 537394 537891 + ClpXP_protease_specificity-enhancing_factor sspB QIB93477 537999 538790 + transcriptional_regulator_NanR nanR QIB93478 538912 539805 + N-acetylneuraminate_lyase nanA QIB93479 539914 541404 + sialic_acid_transporter_NanT nanT QIB93480 541452 542141 + N-acetylmannosamine-6-phosphate_2-epimerase G3273_02630 QIB93481 542138 543013 + N-acetylmannosamine_kinase G3273_02635 QIB93482 543010 543474 + DUF386_domain-containing_protein G3273_02640 QIB93483 543534 544661 - DUF1016_domain-containing_protein G3273_02645 QIB93484 544845 546263 - glutamate_synthase G3273_02650 QIB97362 546276 550736 - glutamate_synthase_large_subunit gltB QIB93485 551411 552340 + TIGR01212_family_radical_SAM_protein G3273_02660 QIB93486 552436 554772 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIB93487 555002 555655 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIB93488 555652 556380 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QIB93489 556377 557009 - PhoP_regulatory_network_protein_YrbL yrbL QIB93490 557222 557494 - PTS_phosphocarrier_protein_NPr npr QIB93491 557491 558345 - RNase_adapter_RapZ rapZ QIB93492 558391 558882 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QIB93493 559000 559287 - ribosome_hibernation_promoting_factor hpf QIB93494 559310 560743 - RNA_polymerase_factor_sigma-54 rpoN QIB93495 560791 561516 - LPS_export_ABC_transporter_ATP-binding_protein lptB QIB93496 561523 562080 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QIB93497 562049 562624 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QIB93498 562621 563187 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QIB93499 563208 564194 - arabinose-5-phosphate_isomerase_KdsD kdsD QIB93500 564208 565185 - calcium/sodium_antiporter G3273_02735 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QIB93483 91 699 107.449856734 0.0 PJR32595.1 QIB93482 97 291 100.0 2e-98 PJR32597.1 QIB93480 99 456 100.0 1e-160 PJR32599.1 QIB93478 100 611 100.0 0.0 >> 453. CP010151_0 Source: Escherichia coli strain D8, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 2057 Table of genes, locations, strands and annotations of subject cluster: APK36623 4766058 4767503 + protease_TldD tldD APK36624 4767631 4768560 - transcriptional_regulator RG41_23475 APK37178 4768743 4768946 + transporter RG41_23480 APK36625 4768954 4769886 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG41_23485 APK36626 4769892 4771859 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG41_23490 APK36627 4771951 4772223 + hypothetical_protein RG41_23495 APK36628 4772278 4772541 - membrane_protein RG41_23500 APK36629 4772905 4773375 - arginine_repressor RG41_23505 APK36630 4773810 4774748 + malate_dehydrogenase RG41_23510 APK36631 4774811 4775878 - serine_endoprotease RG41_23515 APK36632 4775968 4777335 - serine_endoprotease_DegQ RG41_23520 APK36633 4777489 4777887 - hypothetical_protein RG41_23525 APK36634 4778070 4779197 + hypothetical_protein RG41_23530 APK36635 4779417 4779845 + 50S_ribosomal_protein_L13 RG41_23535 APK36636 4779861 4780253 + 30S_ribosomal_protein_S9 RG41_23540 APK36637 4780648 4781286 + stringent_starvation_protein_A sspA APK36638 4781292 4781789 + Clp_protease_ClpP RG41_23550 APK36639 4781897 4782688 + transcriptional_regulator_NanR RG41_23555 APK36640 4782810 4783703 + N-acetylneuraminate_lyase RG41_23560 APK36641 4783812 4785302 + sialic_acid_transporter RG41_23565 APK36642 4785350 4786039 + N-acetylmannosamine-6-phosphate_2-epimerase RG41_23570 APK36643 4786036 4786911 + N-acetylmannosamine_kinase RG41_23575 APK36644 4786908 4787372 + hypothetical_protein RG41_23580 APK36645 4787432 4788559 - hypothetical_protein RG41_23585 APK36646 4788743 4790161 - glutamate_synthase RG41_23590 APK37179 4790174 4794634 - glutamate_synthase gltB APK37180 4795309 4796238 + hypothetical_protein RG41_23600 APK36647 4796334 4798670 + aerobic_respiration_control_sensor_protein_ArcB RG41_23605 APK36648 4798900 4799553 + isoprenoid_biosynthesis_protein RG41_23610 APK36649 4799550 4800278 + peptidoglycan_transglycosylase mtgA APK36650 4800275 4800907 - hypothetical_protein RG41_23620 APK36651 4801120 4801392 - phosphohistidinoprotein-hexose phosphotransferase RG41_23625 APK36652 4801389 4802243 - glmZ(sRNA)-inactivating_NTPase RG41_23630 APK36653 4802289 4802780 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG41_23635 APK36654 4802898 4803185 - ribosome_hibernation_promoting_factor_HPF RG41_23640 APK36655 4803208 4804641 - RNA_polymerase_factor_sigma-54 RG41_23645 APK36656 4804689 4805414 - sugar_ABC_transporter_ATP-binding_protein RG41_23650 APK36657 4805421 4805978 - lipopolysaccharide_transporter RG41_23655 APK36658 4805947 4806522 - lipopolysaccharide_transporter RG41_23660 APK36659 4806519 4807085 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG41_23665 APK36660 4807106 4808092 - D-arabinose_5-phosphate_isomerase RG41_23670 APK36661 4808106 4809083 - calcium/sodium:proton_antiporter RG41_23675 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APK36645 91 699 107.449856734 0.0 PJR32595.1 APK36644 97 291 100.0 2e-98 PJR32597.1 APK36642 99 456 100.0 1e-160 PJR32599.1 APK36640 100 611 100.0 0.0 >> 454. LR134238_0 Source: Escherichia coli strain NCTC9044 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 1895 Table of genes, locations, strands and annotations of subject cluster: VED08246 1097464 1097661 + D-arabinose_5-phosphate_isomerase kdsD VED08248 1097682 1098248 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC VED08250 1098245 1099345 + putative_organic_solvent_tolerance_protein lptC VED08252 1099352 1100077 + lipopolysaccharide_ABC_transporter lptB VED08254 1100125 1101435 + RNA_polymerase_sigma-54_factor_(sigma-N) rpoN VED08256 1101580 1101855 + putative_sigma(54)_modulation_protein yhbH VED08258 1102034 1102474 + PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN VED08260 1102520 1103242 + putative_ATPase yhbJ_1 VED08262 1103212 1103373 + putative_ATPase yhbJ_2 VED08264 1103370 1103642 + phosphocarrier_protein ptsO VED08266 1103855 1104487 + protein yrbL VED08268 1104484 1105212 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VED08270 1105209 1105862 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VED08272 1106092 1108428 - aerobic_respiration_control_protein arcB VED08274 1108524 1109453 - putative_radical_SAM_protein NCTC9044_01258 VED08276 1110035 1113493 + glutamate_synthase_subunit_alpha gltB_1 VED08278 1113474 1114589 + glutamate_synthase_subunit_alpha gltB_2 VED08280 1114602 1116020 + glutamate_synthase_(NADPH)_small_subunit gltD_2 VED08282 1116204 1117316 + protein yhcG VED08284 1117376 1117840 - beta-galactosidase yhcH VED08286 1117837 1118712 - putative_transcriptional_regulator nanK VED08288 1118709 1119398 - N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VED08291 1119446 1120936 - sialic_acid_transporter nanT VED08293 1121045 1121938 - N-acetylneuraminate_lyase nanA VED08295 1122060 1122851 - GntR_family_transcriptional_regulator nanR VED08297 1123231 1124598 + C4-dicarboxylate_transporter dcuD VED08299 1124642 1125139 - stringent_starvation_protein_B sspB VED08302 1125145 1125783 - stringent_starvation_protein_A sspA VED08304 1126179 1126571 - 30S_ribosomal_protein_S9 rpsI VED08306 1126587 1127015 - 50S_ribosomal_protein_L13 rplM VED08308 1127234 1128361 - putative_ATP/GTP-binding_protein yhcM VED08310 1128555 1128953 + cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VED08312 1129107 1130474 + serine_endoprotease degQ VED08314 1130564 1131631 + protease degS VED08316 1131694 1132632 - malate_dehydrogenase mdh VED08318 1133067 1133537 + arginine_repressor argR VED08320 1133902 1134165 + protein_YcfR ycfR VED08322 1134221 1134493 - barnase_inhibitor yhcO VED08324 1134585 1136552 - p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VED08326 1136558 1137490 - p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VED08328 1137498 1137701 - protein_AaeX aaeX VED08330 1137884 1138813 + LysR_family_transcriptional_regulator aaeR VED08332 1138941 1140386 - TldD_protein tldD VED08334 1140542 1144342 - membrane_protein yhdP Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 VED08284 97 291 100.0 2e-98 PJR32597.1 VED08288 99 456 100.0 1e-160 PJR32599.1 VED08293 100 611 100.0 0.0 PJR32600.1 VED08295 100 537 100.0 0.0 >> 455. FN554766_0 Source: Escherichia coli 042 complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 1895 Table of genes, locations, strands and annotations of subject cluster: CBG36314 3711110 3711676 + 3-deoxy-d-manno-octulosonate_8-phosphate phosphatase kdsC CBG36315 3711673 3712248 + putative_organic_solvent_tolerance_protein EC042_3489 CBG36316 3712217 3712774 + putative_organic_solvent_tolerance_protein EC042_3490 CBG36317 3712781 3713506 + putative_organic_solvent_tolerance_ABC transporter, ATP-binding protein EC042_3491 CBG36318 3713554 3714987 + RNA_polymerase_sigma-54_factor_(sigma-N) rpoN CBG36319 3715010 3715297 + probable_sigma(54)_modulation_protein EC042_3493 CBG36320 3715415 3715906 + nitrogen_regulatory_protein_includes_PTS_system EIIA component] ptsN CBG36321 3715952 3716806 + putative_ATPase EC042_3495 CBG36322 3716803 3717075 + phosphocarrier_protein ptsO CBG36323 3717288 3717920 + conserved_hypothetical_protein EC042_3497 CBG36324 3717917 3718645 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA CBG36325 3718642 3719295 - enhancing_lycopene_biosynthesis_protein_2_(sigma cross-reacting protein 27A) elbB CBG36326 3719525 3721861 - aerobic_respiration_control_protein arcB CBG36327 3721957 3722886 - radical_SAM_superfamily_protein EC042_3501 CBG36328 3723468 3728021 + glutamate_synthase_[NADPH]_large_subunit gltB CBG36329 3728034 3729452 + glutamate_synthase_(NADPH)_small_subunit gltD CBG36330 3729636 3730748 + conserved_hypothetical_protein EC042_3504 CBG36331 3730808 3731272 - conserved_hypothetical_protein EC042_3505 CBG36332 3731269 3732144 - putative_N-acetylmannosamine_kinase nanK CBG36333 3732141 3732830 - putative_N-acetylmannosamine-6-phosphate 2-epimerase nanE CBG36334 3732878 3734368 - putative_sialic_acid_transporter nanT CBG36335 3734477 3735370 - N-acetylneuraminate_lyase nanA CBG36336 3735492 3736283 - GntR-family_transcriptional_regulator nanR CBG36337 3736663 3738030 + C4-dicarboxylate_transporter dcuD CBG36338 3738074 3738571 - stringent_starvation_protein_B sspB CBG36339 3738577 3739215 - stringent_starvation_protein_A sspA CBG36340 3739610 3740002 - 30S_ribosomal_subunit_protein_S9 rpsI CBG36341 3740018 3740446 - 50S_ribosomal_subunit_protein_L13 rplM CBG36342 3740665 3741792 - putative_ATP/GTP-binding_protein EC042_3517 CBG36343 3741986 3742384 + conserved_hypothetical_protein EC042_3518 CBG36344 3742538 3743905 + protease degQ CBG36345 3743995 3745062 + protease degS CBG36346 3745125 3746063 - malate_dehydrogenase mdh CBG36347 3746498 3746968 + arginine_repressor argR CBG36348 3747333 3747596 + conserved_hypothetical_protein EC042_3523 CBG36349 3747652 3747924 - conserved_hypothetical_protein EC042_3524 CBG36350 3748016 3749983 - p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB CBG36351 3749989 3750921 - p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA CBG36352 3750929 3751132 - putative_membrane_protein aaeX CBG36353 3751315 3752244 + LysR-family_transcriptional_regulator aaeR CBG36354 3752372 3753817 - TldD_protein tldD CBG36355 3753973 3757773 - possible_exported_protein EC042_3530 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 CBG36331 97 291 100.0 2e-98 PJR32597.1 CBG36333 99 456 100.0 1e-160 PJR32599.1 CBG36335 100 611 100.0 0.0 PJR32600.1 CBG36336 100 537 100.0 0.0 >> 456. CP040390_0 Source: Escherichia coli strain A1_136 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 1895 Table of genes, locations, strands and annotations of subject cluster: QCV37776 566938 568383 + metalloprotease_TldD tldD QCV37777 568510 569439 - HTH-type_transcriptional_activator_AaeR aaeR QCV37778 569622 569825 + DUF1656_domain-containing_protein FE198_02785 QCV37779 569833 570765 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCV37780 570771 572738 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCV37781 572830 573102 + hypothetical_protein FE198_02800 QCV37782 573158 573421 - peroxide/acid_stress_response_protein_YhcN yhcN QCV37783 573786 574256 - transcriptional_regulator_ArgR argR QCV37784 574691 575629 + malate_dehydrogenase mdh QCV37785 575692 576759 - serine_endoprotease_DegS FE198_02820 QCV37786 576849 578216 - serine_endoprotease_DegQ degQ QCV37787 578370 578768 - DUF1043_family_protein FE198_02830 QCV37788 578962 580089 + cell_division_protein_ZapE FE198_02835 QCV37789 580308 580736 + 50S_ribosomal_protein_L13 rplM QCV37790 580752 581144 + 30S_ribosomal_protein_S9 rpsI QCV37791 581062 581283 - hypothetical_protein FE198_02850 QCV37792 581539 582177 + stringent_starvation_protein_A sspA QCV37793 582183 582680 + ClpXP_protease_specificity-enhancing_factor sspB QCV37794 582724 584091 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QCV37795 584471 585262 + transcriptional_regulator_NanR nanR QCV37796 585384 586277 + N-acetylneuraminate_lyase nanA QCV37797 586386 587876 + sialic_acid_transporter_NanT nanT QCV37798 587924 588613 + N-acetylmannosamine-6-phosphate_2-epimerase FE198_02885 QCV37799 588610 589485 + ROK_family_protein FE198_02890 QCV37800 589482 589946 + DUF386_domain-containing_protein FE198_02895 QCV37801 590006 591118 - DUF1016_domain-containing_protein FE198_02900 QCV37802 591302 592720 - glutamate_synthase_small_subunit FE198_02905 QCV42029 592733 597193 - glutamate_synthase_large_subunit gltB QCV37803 597868 598797 + TIGR01212_family_radical_SAM_protein FE198_02915 QCV37804 598893 601229 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QCV37805 601459 602112 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QCV37806 602109 602837 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QCV37807 602834 603466 - PhoP_regulatory_network_protein_YrbL yrbL QCV37808 603679 603951 - PTS_phosphocarrier_protein_NPr npr QCV37809 603948 604802 - RNase_adapter_RapZ rapZ QCV37810 604848 605339 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QCV37811 605457 605744 - ribosome_hibernation_promoting_factor FE198_02955 QCV37812 605767 607200 - RNA_polymerase_factor_sigma-54 rpoN QCV37813 607248 607973 - LPS_export_ABC_transporter_ATP-binding_protein lptB QCV37814 607980 608537 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QCV37815 608506 609081 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCV37816 609078 609644 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QCV37817 609665 610651 - arabinose-5-phosphate_isomerase_KdsD kdsD Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QCV37800 97 291 100.0 2e-98 PJR32597.1 QCV37798 99 456 100.0 1e-160 PJR32599.1 QCV37796 100 611 100.0 0.0 PJR32600.1 QCV37795 100 537 100.0 0.0 >> 457. CP032261_0 Source: Escherichia coli strain AR_0067 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 1895 Table of genes, locations, strands and annotations of subject cluster: AXZ84413 424449 425894 + metalloprotease_TldD tldD AXZ84414 426022 426951 - HTH-type_transcriptional_activator_AaeR aaeR AXZ84415 427134 427337 + protein_AaeX AM446_04065 AXZ84416 427345 428277 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AXZ84417 428283 430250 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AXZ84418 430342 430614 + hypothetical_protein AM446_04080 AXZ84419 430670 430933 - DUF1471_domain-containing_protein AM446_04085 AXZ84420 431298 431768 - transcriptional_regulator_ArgR argR AXZ84421 432203 433141 + malate_dehydrogenase AM446_04095 AXZ84422 433204 434271 - outer_membrane-stress_sensor_serine endopeptidase DegS AM446_04100 AXZ84423 434361 435728 - periplasmic_pH-dependent_serine_endoprotease DegQ AM446_04105 AXZ84424 435882 436280 - DUF1043_family_protein AM446_04110 AXZ84425 436474 437601 + cell_division_protein_ZapE zapE AXZ84426 437820 438248 + 50S_ribosomal_protein_L13 AM446_04120 AXZ84427 438264 438656 + 30S_ribosomal_protein_S9 AM446_04125 AXZ84428 438574 438795 - hypothetical_protein AM446_04130 AXZ88730 438769 438948 + hypothetical_protein AM446_04135 AXZ88729 438900 439109 - hypothetical_protein AM446_04140 AXZ84429 439051 439689 + stringent_starvation_protein_A AM446_04145 AXZ84430 439695 440192 + stringent_starvation_protein_B AM446_04150 AXZ84431 440236 441603 - C4-dicarboxylate_transporter_DcuC dcuC AM446_04160 441603 441713 + transposase no_locus_tag AXZ84432 441983 442774 + transcriptional_regulator_NanR AM446_04165 AXZ84433 442896 443789 + N-acetylneuraminate_lyase nanA AXZ84434 443898 445388 + MFS_transporter AM446_04175 AXZ84435 445436 446125 + N-acetylmannosamine-6-phosphate_2-epimerase AM446_04180 AXZ84436 446122 446997 + ROK_family_protein AM446_04185 AXZ84437 446994 447458 + YhcH/YjgK/YiaL_family_protein AM446_04190 AXZ84438 447518 448630 - DUF1016_domain-containing_protein AM446_04195 AXZ84439 448814 450232 - glutamate_synthase_small_subunit AM446_04200 AXZ84440 450245 454705 - glutamate_synthase_large_subunit AM446_04205 AM446_04210 454628 454854 + hypothetical_protein no_locus_tag AXZ84441 454752 454988 + hypothetical_protein AM446_04215 AXZ88731 455380 456309 + TIGR01212_family_radical_SAM_protein AM446_04220 AXZ84442 456405 458741 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB AXZ84443 458971 459624 + glutamine_amidotransferase AM446_04230 AXZ84444 459621 460349 + monofunctional_biosynthetic_peptidoglycan transglycosylase AM446_04235 AXZ84445 460346 460978 - PhoP_regulatory_network_protein_YrbL yrbL AXZ84446 461191 461463 - phosphocarrier_protein_NPr AM446_04245 AXZ84447 461460 462314 - RNase_adaptor_protein_RapZ AM446_04250 AXZ84448 462360 462851 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN AXZ84449 462969 463256 - ribosome_hibernation_promoting_factor AM446_04260 AXZ84450 463279 464712 - RNA_polymerase_sigma-54_factor AM446_04265 AXZ84451 464760 465485 - ABC_transporter_ATP-binding_protein AM446_04270 AXZ84452 465492 466049 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA AXZ84453 466018 466593 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC AXZ84454 466590 467156 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC AXZ84455 467177 468163 - arabinose_5-phosphate_isomerase_KdsD AM446_04290 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AXZ84437 97 291 100.0 2e-98 PJR32597.1 AXZ84435 99 456 100.0 1e-160 PJR32599.1 AXZ84433 100 611 100.0 0.0 PJR32600.1 AXZ84432 100 537 100.0 0.0 >> 458. CP029579_0 Source: Escherichia coli strain DA33137 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 1895 Table of genes, locations, strands and annotations of subject cluster: AWO31334 3149331 3150776 + metalloprotease_TldD DLJ64_16270 AWO31335 3150904 3151833 - HTH-type_transcriptional_activator_AaeR DLJ64_16275 AWO31336 3152016 3152219 + protein_AaeX DLJ64_16280 AWO31337 3152227 3153159 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA DLJ64_16285 AWO31338 3153165 3155132 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB DLJ64_16290 AWO31339 3155224 3155496 + hypothetical_protein DLJ64_16295 AWO31340 3155552 3155815 - DUF1471_domain-containing_protein DLJ64_16300 AWO31341 3156180 3156650 - arginine_repressor DLJ64_16305 AWO31342 3157085 3158023 + malate_dehydrogenase DLJ64_16310 AWO31343 3158086 3159153 - outer_membrane-stress_sensor_serine endopeptidase DegS DLJ64_16315 AWO31344 3159243 3160610 - periplasmic_pH-dependent_serine_endoprotease DegQ DLJ64_16320 AWO31345 3160764 3161162 - DUF1043_domain-containing_protein DLJ64_16325 AWO31346 3161356 3162483 + cell_division_protein_ZapE DLJ64_16330 AWO31347 3162702 3163130 + 50S_ribosomal_protein_L13 DLJ64_16335 AWO31348 3163146 3163538 + 30S_ribosomal_protein_S9 DLJ64_16340 AWO31349 3163456 3163677 - hypothetical_protein DLJ64_16345 AWO33426 3163651 3163830 + hypothetical_protein DLJ64_16350 AWO33425 3163782 3163991 - hypothetical_protein DLJ64_16355 AWO31350 3163933 3164571 + stringent_starvation_protein_A DLJ64_16360 AWO31351 3164577 3165074 + stringent_starvation_protein_B DLJ64_16365 AWO31352 3165118 3166485 - C4-dicarboxylate_transporter_DcuC DLJ64_16370 DLJ64_16375 3166485 3166595 + transposase no_locus_tag AWO31353 3166865 3167656 + transcriptional_regulator_NanR nanR AWO31354 3167778 3168671 + N-acetylneuraminate_lyase nanA AWO31355 3168780 3170270 + MFS_transporter DLJ64_16390 AWO31356 3170318 3171007 + N-acetylmannosamine-6-phosphate_2-epimerase DLJ64_16395 AWO31357 3171004 3171879 + N-acetylmannosamine_kinase DLJ64_16400 AWO31358 3171876 3172340 + YhcH/YjgK/YiaL_family_protein DLJ64_16405 AWO31359 3172400 3173512 - DUF1016_domain-containing_protein DLJ64_16410 AWO31360 3173696 3175114 - glutamate_synthase_small_subunit DLJ64_16415 AWO31361 3175127 3179587 - glutamate_synthase_large_subunit DLJ64_16420 DLJ64_16425 3179510 3179736 + hypothetical_protein no_locus_tag AWO31362 3179634 3179870 + hypothetical_protein DLJ64_16430 AWO33427 3180262 3181191 + TIGR01212_family_radical_SAM_protein DLJ64_16435 AWO31363 3181287 3183623 + aerobic_respiration_two-component_sensor histidine kinase ArcB DLJ64_16440 AWO31364 3183853 3184506 + glutamine_amidotransferase DLJ64_16445 AWO31365 3184503 3185231 + monofunctional_biosynthetic_peptidoglycan transglycosylase DLJ64_16450 AWO31366 3185228 3185860 - protein_YrbL yrbL AWO31367 3186073 3186345 - phosphocarrier_protein_NPr DLJ64_16460 AWO31368 3186342 3187196 - RNase_adaptor_protein_RapZ DLJ64_16465 AWO31369 3187242 3187733 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN DLJ64_16470 AWO31370 3187851 3188138 - ribosome_hibernation_promoting_factor DLJ64_16475 AWO31371 3188161 3189594 - RNA_polymerase_sigma-54_factor DLJ64_16480 AWO31372 3189642 3190367 - ABC_transporter_ATP-binding_protein DLJ64_16485 AWO31373 3190374 3190931 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA DLJ64_16490 AWO31374 3190900 3191475 - LPS_export_ABC_transporter_periplasmic_protein LptC DLJ64_16495 AWO31375 3191472 3192038 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC AWO31376 3192059 3193045 - arabinose_5-phosphate_isomerase_KdsD DLJ64_16505 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AWO31358 97 291 100.0 2e-98 PJR32597.1 AWO31356 99 456 100.0 1e-160 PJR32599.1 AWO31354 100 611 100.0 0.0 PJR32600.1 AWO31353 100 537 100.0 0.0 >> 459. CP025573_0 Source: Escherichia coli strain E-1246 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 1895 Table of genes, locations, strands and annotations of subject cluster: AZZ28292 3993105 3993671 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC CY655_20705 AZZ28293 3993668 3994243 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AZZ28294 3994212 3994769 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA CY655_20715 AZZ28295 3994776 3995501 + ABC_transporter_ATP-binding_protein lptB AZZ28296 3995549 3996982 + RNA_polymerase_sigma-54_factor CY655_20725 AZZ28297 3997005 3997292 + ribosome_hibernation_promoting_factor CY655_20730 AZZ28298 3997410 3997901 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN CY655_20735 AZZ28299 3997947 3998801 + RNase_adaptor_protein_RapZ CY655_20740 AZZ28300 3998798 3999070 + phosphocarrier_protein_NPr CY655_20745 AZZ28301 3999283 3999915 + protein_YrbL yrbL AZZ28302 3999912 4000640 - monofunctional_biosynthetic_peptidoglycan transglycosylase CY655_20755 AZZ28303 4000637 4001290 - glutamine_amidotransferase CY655_20760 AZZ28304 4001520 4003856 - hybrid_sensor_histidine_kinase/response regulator CY655_20765 AZZ29765 4003952 4004881 - TIGR01212_family_radical_SAM_protein CY655_20770 AZZ28305 4005273 4005509 - hypothetical_protein CY655_20775 CY655_20780 4005407 4005633 - hypothetical_protein no_locus_tag AZZ28306 4005556 4010016 + glutamate_synthase_large_subunit CY655_20785 AZZ28307 4010029 4011447 + glutamate_synthase_small_subunit CY655_20790 AZZ28308 4011631 4012743 + DUF1016_domain-containing_protein CY655_20795 AZZ28309 4012803 4013267 - YhcH/YjgK/YiaL_family_protein CY655_20800 AZZ28310 4013264 4014139 - N-acetylmannosamine_kinase CY655_20805 AZZ28311 4014136 4014825 - N-acetylmannosamine-6-phosphate_2-epimerase CY655_20810 AZZ28312 4014873 4016363 - MFS_transporter CY655_20815 AZZ28313 4016472 4017365 - N-acetylneuraminate_lyase nanA AZZ28314 4017487 4018278 - transcriptional_regulator_NanR nanR CY655_20830 4018548 4018658 - transposase no_locus_tag AZZ28315 4018658 4020025 + C4-dicarboxylate_transporter CY655_20835 AZZ28316 4020069 4020566 - stringent_starvation_protein_B CY655_20840 AZZ28317 4020572 4021210 - stringent_starvation_protein_A CY655_20845 AZZ28318 4021152 4021361 + hypothetical_protein CY655_20850 AZZ29766 4021313 4021492 - hypothetical_protein CY655_20855 AZZ28319 4021466 4021687 + hypothetical_protein CY655_20860 AZZ28320 4021605 4021997 - 30S_ribosomal_protein_S9 CY655_20865 AZZ28321 4022013 4022441 - 50S_ribosomal_protein_L13 CY655_20870 AZZ28322 4022660 4023787 - cell_division_protein_ZapE CY655_20875 AZZ28323 4023981 4024379 + hypothetical_protein CY655_20880 AZZ28324 4024533 4025900 + periplasmic_pH-dependent_serine_endoprotease DegQ CY655_20885 AZZ28325 4025990 4027057 + outer_membrane-stress_sensor_serine endopeptidase DegS CY655_20890 AZZ28326 4027120 4028058 - malate_dehydrogenase CY655_20895 AZZ28327 4028493 4028963 + arginine_repressor CY655_20900 AZZ28328 4029328 4029591 + DUF1471_domain-containing_protein CY655_20905 AZZ28329 4029647 4029919 - hypothetical_protein CY655_20910 AZZ28330 4030011 4031978 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CY655_20915 AZZ28331 4031984 4032916 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CY655_20920 AZZ28332 4032924 4033127 - protein_AaeX CY655_20925 AZZ28333 4033310 4034239 + HTH-type_transcriptional_activator_AaeR CY655_20930 AZZ28334 4034366 4035811 - metalloprotease_TldD CY655_20935 AZZ28335 4035967 4039767 - TIGR02099_family_protein CY655_20940 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AZZ28309 97 291 100.0 2e-98 PJR32597.1 AZZ28311 99 456 100.0 1e-160 PJR32599.1 AZZ28313 100 611 100.0 0.0 PJR32600.1 AZZ28314 100 537 100.0 0.0 >> 460. CP023820_0 Source: Escherichia coli strain 7/2 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 1895 Table of genes, locations, strands and annotations of subject cluster: AZH35469 3650560 3651126 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC CRT46_18775 AZH35470 3651123 3651698 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AZH35471 3651667 3652224 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA CRT46_18785 AZH35472 3652231 3652956 + ABC_transporter_ATP-binding_protein lptB AZH35473 3653004 3654437 + RNA_polymerase_sigma-54_factor CRT46_18795 AZH35474 3654460 3654747 + ribosome_hibernation_promoting_factor CRT46_18800 AZH35475 3654865 3655356 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN CRT46_18805 AZH35476 3655402 3656256 + RNase_adaptor_protein_RapZ CRT46_18810 AZH35477 3656253 3656525 + phosphocarrier_protein_NPr CRT46_18815 AZH35478 3656738 3657370 + protein_YrbL CRT46_18820 AZH35479 3657367 3658095 - monofunctional_biosynthetic_peptidoglycan transglycosylase CRT46_18825 AZH35480 3658092 3658745 - glutamine_amidotransferase CRT46_18830 AZH35481 3658975 3661311 - aerobic_respiration_two-component_sensor histidine kinase ArcB CRT46_18835 AZH36941 3661407 3662336 - TIGR01212_family_radical_SAM_protein CRT46_18840 AZH35482 3662728 3662964 - hypothetical_protein CRT46_18845 CRT46_18850 3662862 3663088 - hypothetical_protein no_locus_tag AZH35483 3663011 3667471 + glutamate_synthase_large_subunit CRT46_18855 AZH35484 3667484 3668902 + glutamate_synthase_small_subunit CRT46_18860 AZH35485 3669086 3670198 + DUF1016_domain-containing_protein CRT46_18865 AZH35486 3670258 3670722 - YhcH/YjgK/YiaL_family_protein CRT46_18870 AZH35487 3670719 3671594 - N-acetylmannosamine_kinase CRT46_18875 AZH35488 3671591 3672280 - N-acetylmannosamine-6-phosphate_2-epimerase CRT46_18880 AZH35489 3672328 3673818 - MFS_transporter CRT46_18885 AZH35490 3673927 3674820 - N-acetylneuraminate_lyase nanA AZH35491 3674942 3675733 - transcriptional_regulator_NanR CRT46_18895 CRT46_18900 3676003 3676113 - transposase no_locus_tag AZH35492 3676113 3677480 + C4-dicarboxylate_transporter CRT46_18905 AZH35493 3677524 3678021 - stringent_starvation_protein_B CRT46_18910 AZH35494 3678027 3678665 - stringent_starvation_protein_A CRT46_18915 AZH35495 3678607 3678816 + hypothetical_protein CRT46_18920 AZH36942 3678768 3678947 - hypothetical_protein CRT46_18925 AZH35496 3678921 3679142 + hypothetical_protein CRT46_18930 AZH35497 3679060 3679452 - 30S_ribosomal_protein_S9 CRT46_18935 AZH35498 3679468 3679896 - 50S_ribosomal_protein_L13 CRT46_18940 AZH35499 3680115 3681242 - cell_division_protein_ZapE CRT46_18945 AZH35500 3681436 3681834 + hypothetical_protein CRT46_18950 AZH35501 3681988 3683355 + periplasmic_pH-dependent_serine_endoprotease DegQ CRT46_18955 AZH35502 3683445 3684512 + outer_membrane-stress_sensor_serine endopeptidase DegS CRT46_18960 AZH35503 3684575 3685513 - malate_dehydrogenase CRT46_18965 AZH35504 3685948 3686418 + arginine_repressor CRT46_18970 AZH35505 3686783 3687046 + DUF1471_domain-containing_protein CRT46_18975 AZH35506 3687102 3687374 - hypothetical_protein CRT46_18980 AZH35507 3687466 3689433 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CRT46_18985 AZH35508 3689439 3690371 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CRT46_18990 AZH35509 3690379 3690582 - protein_AaeX CRT46_18995 AZH35510 3690765 3691694 + HTH-type_transcriptional_activator_AaeR CRT46_19000 AZH35511 3691822 3693267 - metalloprotease_TldD CRT46_19005 AZH35512 3693423 3697223 - TIGR02099_family_protein CRT46_19010 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AZH35486 97 291 100.0 2e-98 PJR32597.1 AZH35488 99 456 100.0 1e-160 PJR32599.1 AZH35490 100 611 100.0 0.0 PJR32600.1 AZH35491 100 537 100.0 0.0 >> 461. CP023364_0 Source: Escherichia coli strain 144 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 1895 Table of genes, locations, strands and annotations of subject cluster: ATB86389 567636 569081 + metalloprotease_TldD CNQ53_03740 ATB86390 569208 570137 - HTH-type_transcriptional_activator_AaeR CNQ53_03745 ATB86391 570320 570523 + protein_AaeX CNQ53_03750 ATB86392 570531 571463 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CNQ53_03755 ATB86393 571469 573436 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CNQ53_03760 ATB86394 573528 573800 + hypothetical_protein CNQ53_03765 ATB86395 573856 574119 - hypothetical_protein CNQ53_03770 ATB86396 574484 574954 - arginine_repressor CNQ53_03775 ATB86397 575389 576327 + malate_dehydrogenase CNQ53_03780 ATB86398 576390 577457 - outer_membrane-stress_sensor_serine endopeptidase DegS CNQ53_03785 ATB86399 577547 578914 - periplasmic_pH-dependent_serine_endoprotease DegQ CNQ53_03790 ATB86400 579068 579466 - hypothetical_protein CNQ53_03795 ATB86401 579660 580787 + cell_division_protein_ZapE CNQ53_03800 ATB86402 581006 581434 + 50S_ribosomal_protein_L13 CNQ53_03805 ATB86403 581450 581842 + 30S_ribosomal_protein_S9 CNQ53_03810 ATB86404 581760 581981 - hypothetical_protein CNQ53_03815 ATB90502 581955 582134 + hypothetical_protein CNQ53_03820 ATB90501 582086 582295 - hypothetical_protein CNQ53_03825 ATB86405 582237 582875 + stringent_starvation_protein_A CNQ53_03830 ATB86406 582881 583378 + stringent_starvation_protein_B CNQ53_03835 ATB86407 583422 584789 - C4-dicarboxylate_transporter CNQ53_03840 CNQ53_03845 584789 584899 + transposase no_locus_tag ATB86408 585169 585960 + transcriptional_regulator_NanR CNQ53_03850 ATB86409 586082 586975 + N-acetylneuraminate_lyase nanA ATB86410 587084 588574 + MFS_transporter CNQ53_03860 ATB86411 588622 589311 + N-acetylmannosamine-6-phosphate_2-epimerase CNQ53_03865 ATB86412 589308 590183 + N-acetylmannosamine_kinase CNQ53_03870 ATB86413 590180 590644 + YhcH/YjgK/YiaL_family_protein CNQ53_03875 ATB86414 590704 591816 - DUF1016_domain-containing_protein CNQ53_03880 ATB86415 592000 593418 - glutamate_synthase_small_subunit CNQ53_03885 ATB86416 593431 597891 - glutamate_synthase_large_subunit CNQ53_03890 CNQ53_03895 597814 598040 + hypothetical_protein no_locus_tag ATB86417 597938 598174 + hypothetical_protein CNQ53_03900 ATB90503 598566 599495 + TIGR01212_family_radical_SAM_protein CNQ53_03905 ATB86418 599591 601927 + hybrid_sensor_histidine_kinase/response regulator CNQ53_03910 ATB86419 602157 602810 + glutamine_amidotransferase CNQ53_03915 ATB86420 602807 603535 + monofunctional_biosynthetic_peptidoglycan transglycosylase CNQ53_03920 ATB86421 603532 604164 - protein_YrbL CNQ53_03925 ATB86422 604377 604649 - phosphocarrier_protein_NPr CNQ53_03930 ATB86423 604646 605500 - RNase_adaptor_protein_RapZ CNQ53_03935 ATB86424 605546 606037 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN CNQ53_03940 ATB86425 606155 606442 - ribosome_hibernation_promoting_factor CNQ53_03945 ATB86426 606465 607898 - RNA_polymerase_sigma-54_factor CNQ53_03950 ATB86427 607946 608671 - ABC_transporter_ATP-binding_protein lptB ATB86428 608678 609235 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA CNQ53_03960 ATB86429 609204 609779 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC ATB86430 609776 610342 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC CNQ53_03970 ATB86431 610363 611349 - arabinose_5-phosphate_isomerase_KdsD CNQ53_03975 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 ATB86413 97 291 100.0 2e-98 PJR32597.1 ATB86411 99 456 100.0 1e-160 PJR32599.1 ATB86409 100 611 100.0 0.0 PJR32600.1 ATB86408 100 537 100.0 0.0 >> 462. CP023353_0 Source: Escherichia coli strain 746 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 1895 Table of genes, locations, strands and annotations of subject cluster: ATB71501 570813 572258 + metalloprotease_TldD CNQ56_02870 ATB71502 572386 573315 - HTH-type_transcriptional_activator_AaeR CNQ56_02875 ATB71503 573498 573701 + protein_AaeX CNQ56_02880 ATB71504 573709 574641 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CNQ56_02885 ATB71505 574647 576614 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CNQ56_02890 ATB71506 576706 576978 + hypothetical_protein CNQ56_02895 ATB71507 577034 577297 - hypothetical_protein CNQ56_02900 ATB71508 577662 578132 - arginine_repressor CNQ56_02905 ATB71509 578567 579505 + malate_dehydrogenase CNQ56_02910 ATB71510 579568 580635 - outer_membrane-stress_sensor_serine endopeptidase DegS CNQ56_02915 ATB71511 580725 582092 - periplasmic_pH-dependent_serine_endoprotease DegQ CNQ56_02920 ATB71512 582246 582644 - hypothetical_protein CNQ56_02925 ATB71513 582838 583965 + cell_division_protein_ZapE CNQ56_02930 ATB71514 584184 584612 + 50S_ribosomal_protein_L13 CNQ56_02935 ATB71515 584628 585020 + 30S_ribosomal_protein_S9 CNQ56_02940 ATB71516 584938 585159 - hypothetical_protein CNQ56_02945 ATB75596 585133 585312 + hypothetical_protein CNQ56_02950 ATB75595 585264 585473 - hypothetical_protein CNQ56_02955 ATB71517 585415 586053 + stringent_starvation_protein_A CNQ56_02960 ATB71518 586059 586556 + stringent_starvation_protein_B CNQ56_02965 ATB71519 586600 587967 - C4-dicarboxylate_transporter CNQ56_02970 CNQ56_02975 587967 588077 + transposase no_locus_tag ATB71520 588347 589138 + transcriptional_regulator_NanR CNQ56_02980 ATB71521 589260 590153 + N-acetylneuraminate_lyase nanA ATB71522 590262 591752 + MFS_transporter CNQ56_02990 ATB71523 591800 592489 + N-acetylmannosamine-6-phosphate_2-epimerase CNQ56_02995 ATB71524 592486 593361 + N-acetylmannosamine_kinase CNQ56_03000 ATB71525 593358 593822 + YhcH/YjgK/YiaL_family_protein CNQ56_03005 ATB71526 593882 594994 - DUF1016_domain-containing_protein CNQ56_03010 ATB71527 595178 596596 - glutamate_synthase_small_subunit CNQ56_03015 ATB71528 596609 601069 - glutamate_synthase_large_subunit CNQ56_03020 CNQ56_03025 600992 601218 + hypothetical_protein no_locus_tag ATB71529 601116 601352 + hypothetical_protein CNQ56_03030 ATB75597 601744 602673 + TIGR01212_family_radical_SAM_protein CNQ56_03035 ATB71530 602769 605105 + hybrid_sensor_histidine_kinase/response regulator CNQ56_03040 ATB71531 605335 605988 + glutamine_amidotransferase CNQ56_03045 ATB71532 605985 606713 + monofunctional_biosynthetic_peptidoglycan transglycosylase CNQ56_03050 ATB71533 606710 607342 - protein_YrbL CNQ56_03055 ATB71534 607555 607827 - phosphocarrier_protein_NPr CNQ56_03060 ATB71535 607824 608678 - RNase_adaptor_protein_RapZ CNQ56_03065 ATB71536 608724 609215 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN CNQ56_03070 ATB71537 609333 609620 - ribosome_hibernation_promoting_factor CNQ56_03075 ATB71538 609643 611076 - RNA_polymerase_sigma-54_factor CNQ56_03080 ATB71539 611124 611849 - ABC_transporter_ATP-binding_protein lptB ATB71540 611856 612413 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA CNQ56_03090 ATB71541 612382 612957 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC ATB71542 612954 613520 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC CNQ56_03100 ATB71543 613541 614527 - arabinose_5-phosphate_isomerase_KdsD CNQ56_03105 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 ATB71525 97 291 100.0 2e-98 PJR32597.1 ATB71523 99 456 100.0 1e-160 PJR32599.1 ATB71521 100 611 100.0 0.0 PJR32600.1 ATB71520 100 537 100.0 0.0 >> 463. CP022229_0 Source: Escherichia coli strain WCHEC96200 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 1895 Table of genes, locations, strands and annotations of subject cluster: AXN86544 1424471 1425037 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC AXN86543 1425034 1425609 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AXN86542 1425578 1426135 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA AXN86541 1426142 1426867 + LPS_export_ABC_transporter_ATP-binding_protein lptB AXN86540 1426915 1428348 + RNA_polymerase_factor_sigma-54 rpoN AXN86539 1428371 1428658 + ribosome_hibernation_promoting_factor DBR04_20730 AXN86538 1428776 1429267 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN AXN86537 1429313 1430167 + RNase_adapter_RapZ rapZ AXN86536 1430164 1430436 + PTS_phosphocarrier_protein_NPr npr AXN86535 1430649 1431281 + PhoP_regulatory_network_protein_YrbL yrbL AXN86534 1431278 1432006 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA AXN86533 1432003 1432656 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB AXN86532 1432886 1435222 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB AXN88017 1435318 1436247 - TIGR01212_family_radical_SAM_protein DBR04_20690 AXN86530 1436922 1441382 + glutamate_synthase_large_subunit gltB AXN86529 1441395 1442813 + NAD(P)-binding_protein DBR04_20670 AXN86528 1442997 1444109 + DUF1016_domain-containing_protein DBR04_20665 AXN86527 1444169 1444633 - DUF386_domain-containing_protein DBR04_20660 AXN86526 1444630 1445505 - N-acetylmannosamine_kinase DBR04_20655 AXN86525 1445502 1446191 - N-acetylmannosamine-6-phosphate_2-epimerase DBR04_20650 AXN86524 1446239 1447729 - sialic_acid_transporter_NanT nanT AXN86523 1447838 1448731 - N-acetylneuraminate_lyase nanA AXN86522 1448853 1449644 - transcriptional_regulator_NanR nanR AXN86521 1450024 1451391 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC AXN86520 1451435 1451932 - ClpXP_protease_specificity-enhancing_factor sspB AXN86519 1451938 1452576 - stringent_starvation_protein_A sspA AXN86518 1452832 1453053 + hypothetical_protein DBR04_20600 AXN86517 1452971 1453363 - 30S_ribosomal_protein_S9 rpsI AXN86516 1453379 1453807 - 50S_ribosomal_protein_L13 rplM AXN86515 1454026 1455153 - cell_division_protein_ZapE DBR04_20585 AXN86514 1455347 1455745 + DUF1043_family_protein DBR04_20580 AXN86513 1455899 1457266 + serine_endoprotease_DegQ degQ AXN86512 1457356 1458423 + serine_endoprotease_DegS DBR04_20570 AXN86511 1458486 1459424 - malate_dehydrogenase mdh AXN86510 1459859 1460329 + transcriptional_regulator_ArgR argR AXN86509 1460694 1460957 + peroxide/acid_stress_response_protein_YhcN yhcN AXN86508 1461013 1461285 - hypothetical_protein DBR04_20550 AXN86507 1461377 1463344 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB AXN86506 1463350 1464282 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA AXN86505 1464290 1464493 - DUF1656_domain-containing_protein DBR04_20535 AXN86504 1464676 1465605 + HTH-type_transcriptional_activator_AaeR aaeR AXN86503 1465733 1467178 - metalloprotease_TldD tldD AXN86502 1467334 1471134 - AsmA2_domain-containing_protein DBR04_20520 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AXN86527 97 291 100.0 2e-98 PJR32597.1 AXN86525 99 456 100.0 1e-160 PJR32599.1 AXN86523 100 611 100.0 0.0 PJR32600.1 AXN86522 100 537 100.0 0.0 >> 464. CP020516_0 Source: Escherichia coli strain 222 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 1895 Table of genes, locations, strands and annotations of subject cluster: AVU58963 519901 521346 + metalloprotease_TldD A9P13_02680 AVU58964 521474 522403 - HTH-type_transcriptional_activator_AaeR A9P13_02685 AVU58965 522586 522789 + protein_AaeX A9P13_02690 AVU58966 522797 523729 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA A9P13_02695 AVU58967 523735 525702 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB A9P13_02700 AVU58968 525794 526066 + hypothetical_protein A9P13_02705 AVU58969 526122 526385 - hypothetical_protein A9P13_02710 AVU58970 526750 527220 - arginine_repressor A9P13_02715 AVU58971 527655 528593 + malate_dehydrogenase A9P13_02720 AVU58972 528656 529723 - outer_membrane-stress_sensor_serine endopeptidase DegS A9P13_02725 AVU58973 529813 531180 - periplasmic_pH-dependent_serine_endoprotease DegQ A9P13_02730 AVU58974 531334 531732 - hypothetical_protein A9P13_02735 AVU58975 531926 533053 + cell_division_protein_ZapE A9P13_02740 AVU58976 533272 533700 + 50S_ribosomal_protein_L13 A9P13_02745 AVU58977 533716 534108 + 30S_ribosomal_protein_S9 A9P13_02750 AVU58978 534026 534247 - hypothetical_protein A9P13_02755 AVU63250 534221 534400 + hypothetical_protein A9P13_02760 AVU63249 534352 534561 - hypothetical_protein A9P13_02765 AVU58979 534503 535141 + stringent_starvation_protein_A A9P13_02770 AVU58980 535147 535644 + stringent_starvation_protein_B A9P13_02775 AVU58981 535688 537055 - C4-dicarboxylate_transporter A9P13_02780 A9P13_02785 537055 537165 + transposase no_locus_tag AVU58982 537435 538226 + transcriptional_regulator_NanR A9P13_02790 AVU58983 538348 539241 + N-acetylneuraminate_lyase nanA AVU58984 539350 540840 + MFS_transporter A9P13_02800 AVU58985 540888 541577 + N-acetylmannosamine-6-phosphate_2-epimerase A9P13_02805 AVU58986 541574 542449 + N-acetylmannosamine_kinase A9P13_02810 AVU58987 542446 542910 + YhcH/YjgK/YiaL_family_protein A9P13_02815 AVU58988 542970 544082 - DUF1016_domain-containing_protein A9P13_02820 AVU58989 544266 545684 - glutamate_synthase_small_subunit A9P13_02825 AVU58990 545697 550157 - glutamate_synthase_large_subunit A9P13_02830 A9P13_02835 550080 550306 + hypothetical_protein no_locus_tag AVU58991 550204 550440 + hypothetical_protein A9P13_02840 AVU63251 550832 551761 + TIGR01212_family_radical_SAM_protein A9P13_02845 AVU58992 551857 554193 + aerobic_respiration_two-component_sensor histidine kinase ArcB A9P13_02850 AVU58993 554423 555076 + glutamine_amidotransferase A9P13_02855 AVU58994 555073 555801 + monofunctional_biosynthetic_peptidoglycan transglycosylase A9P13_02860 AVU58995 555798 556430 - protein_YrbL A9P13_02865 AVU58996 556643 556915 - phosphocarrier_protein_NPr A9P13_02870 AVU58997 556912 557766 - RNase_adaptor_protein_RapZ A9P13_02875 AVU58998 557812 558303 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN A9P13_02880 AVU58999 558421 558708 - ribosome_hibernation_promoting_factor A9P13_02885 AVU59000 558731 560164 - RNA_polymerase_sigma-54_factor A9P13_02890 AVU59001 560212 560937 - ABC_transporter_ATP-binding_protein lptB AVU59002 560944 561501 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA A9P13_02900 AVU59003 561470 562045 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC AVU59004 562042 562608 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC A9P13_02910 AVU59005 562629 563615 - arabinose_5-phosphate_isomerase_KdsD A9P13_02915 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AVU58987 97 291 100.0 2e-98 PJR32597.1 AVU58985 99 456 100.0 1e-160 PJR32599.1 AVU58983 100 611 100.0 0.0 PJR32600.1 AVU58982 100 537 100.0 0.0 >> 465. CP020495_0 Source: Escherichia coli strain 103 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 1895 Table of genes, locations, strands and annotations of subject cluster: QBR65270 519902 521347 + metalloprotease_TldD CPA47_02680 QBR65271 521475 522404 - HTH-type_transcriptional_activator_AaeR CPA47_02685 QBR65272 522587 522790 + protein_AaeX CPA47_02690 QBR65273 522798 523730 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CPA47_02695 QBR65274 523736 525703 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CPA47_02700 QBR65275 525795 526067 + hypothetical_protein CPA47_02705 QBR65276 526123 526386 - hypothetical_protein CPA47_02710 QBR65277 526751 527221 - arginine_repressor CPA47_02715 QBR65278 527656 528594 + malate_dehydrogenase CPA47_02720 QBR65279 528657 529724 - outer_membrane-stress_sensor_serine endopeptidase DegS CPA47_02725 QBR65280 529814 531181 - periplasmic_pH-dependent_serine_endoprotease DegQ CPA47_02730 QBR65281 531335 531733 - hypothetical_protein CPA47_02735 QBR65282 531927 533054 + cell_division_protein_ZapE CPA47_02740 QBR65283 533273 533701 + 50S_ribosomal_protein_L13 CPA47_02745 QBR65284 533717 534109 + 30S_ribosomal_protein_S9 CPA47_02750 QBR65285 534027 534248 - hypothetical_protein CPA47_02755 QBR69548 534222 534401 + hypothetical_protein CPA47_02760 QBR69547 534353 534562 - hypothetical_protein CPA47_02765 QBR65286 534504 535142 + stringent_starvation_protein_A CPA47_02770 QBR65287 535148 535645 + stringent_starvation_protein_B CPA47_02775 QBR65288 535689 537056 - C4-dicarboxylate_transporter CPA47_02780 CPA47_02785 537056 537166 + transposase no_locus_tag QBR65289 537436 538227 + transcriptional_regulator_NanR CPA47_02790 QBR65290 538349 539242 + N-acetylneuraminate_lyase nanA QBR65291 539351 540841 + MFS_transporter CPA47_02800 QBR65292 540889 541578 + N-acetylmannosamine-6-phosphate_2-epimerase CPA47_02805 QBR65293 541575 542450 + N-acetylmannosamine_kinase CPA47_02810 QBR65294 542447 542911 + YhcH/YjgK/YiaL_family_protein CPA47_02815 QBR65295 542971 544083 - DUF1016_domain-containing_protein CPA47_02820 QBR65296 544267 545685 - glutamate_synthase_small_subunit CPA47_02825 QBR65297 545698 550158 - glutamate_synthase_large_subunit CPA47_02830 CPA47_02835 550081 550307 + hypothetical_protein no_locus_tag QBR65298 550205 550441 + hypothetical_protein CPA47_02840 QBR69549 550833 551762 + TIGR01212_family_radical_SAM_protein CPA47_02845 QBR65299 551858 554194 + aerobic_respiration_two-component_sensor histidine kinase ArcB CPA47_02850 QBR65300 554424 555077 + glutamine_amidotransferase CPA47_02855 QBR65301 555074 555802 + monofunctional_biosynthetic_peptidoglycan transglycosylase CPA47_02860 QBR65302 555799 556431 - protein_YrbL CPA47_02865 QBR65303 556644 556916 - phosphocarrier_protein_NPr CPA47_02870 QBR65304 556913 557767 - RNase_adaptor_protein_RapZ CPA47_02875 QBR65305 557813 558304 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN CPA47_02880 QBR65306 558422 558709 - ribosome_hibernation_promoting_factor CPA47_02885 QBR65307 558732 560165 - RNA_polymerase_sigma-54_factor CPA47_02890 QBR65308 560213 560938 - ABC_transporter_ATP-binding_protein lptB QBR65309 560945 561502 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA CPA47_02900 QBR65310 561471 562046 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QBR65311 562043 562609 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC CPA47_02910 QBR65312 562630 563616 - arabinose_5-phosphate_isomerase_KdsD CPA47_02915 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 QBR65294 97 291 100.0 2e-98 PJR32597.1 QBR65292 99 456 100.0 1e-160 PJR32599.1 QBR65290 100 611 100.0 0.0 PJR32600.1 QBR65289 100 537 100.0 0.0 >> 466. CP018976_0 Source: Escherichia coli strain Ecol_545 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 1895 Table of genes, locations, strands and annotations of subject cluster: AQV54065 4334594 4336039 + metalloprotease_TldD BE949_24165 AQV54066 4336166 4337095 - HTH-type_transcriptional_activator_AaeR BE949_24170 AQV54067 4337278 4337481 + protein_AaeX BE949_24175 AQV54068 4337489 4338421 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA BE949_24180 AQV54069 4338427 4340394 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BE949_24185 AQV54070 4340486 4340758 + hypothetical_protein BE949_24190 AQV54912 4340814 4341077 - hypothetical_protein BE949_24195 AQV54071 4341442 4341912 - arginine_repressor BE949_24200 AQV54072 4342347 4343285 + malate_dehydrogenase BE949_24205 AQV54073 4343348 4344415 - outer_membrane-stress_sensor_serine endopeptidase DegS BE949_24210 AQV54074 4344505 4345872 - periplasmic_pH-dependent_serine_endoprotease DegQ BE949_24215 AQV54075 4346026 4346424 - hypothetical_protein BE949_24220 AQV54076 4346618 4347745 + cell_division_protein_ZapE BE949_24225 AQV54077 4347964 4348392 + 50S_ribosomal_protein_L13 BE949_24230 AQV54078 4348408 4348800 + 30S_ribosomal_protein_S9 BE949_24235 AQV54913 4348871 4349092 + hypothetical_protein BE949_24240 AQV54079 4349195 4349833 + stringent_starvation_protein_A sspA AQV54080 4349839 4350336 + stringent_starvation_protein_B BE949_24250 AQV54081 4350380 4351747 - C4-dicarboxylate_transporter BE949_24255 BE949_24260 4351747 4351857 + transposase no_locus_tag AQV54082 4352127 4352918 + transcriptional_regulator_NanR BE949_24265 AQV54083 4353040 4353933 + N-acetylneuraminate_lyase BE949_24270 AQV54084 4354042 4355532 + MFS_transporter BE949_24275 AQV54085 4355580 4356269 + N-acetylmannosamine-6-phosphate_2-epimerase BE949_24280 AQV54086 4356266 4357141 + N-acetylmannosamine_kinase BE949_24285 AQV54087 4357138 4357602 + hypothetical_protein BE949_24290 AQV54088 4357662 4358774 - hypothetical_protein BE949_24295 AQV54089 4358958 4360376 - glutamate_synthase BE949_24300 AQV54090 4360389 4364957 - glutamate_synthase BE949_24305 AQV54091 4364896 4365132 + hypothetical_protein BE949_24310 AQV54914 4365524 4366453 + TIGR01212_family_radical_SAM_protein BE949_24315 AQV54092 4366549 4368885 + hybrid_sensor_histidine_kinase/response regulator BE949_24320 AQV54093 4369115 4369768 + glutamine_amidotransferase BE949_24325 AQV54094 4369765 4370493 + monofunctional_biosynthetic_peptidoglycan transglycosylase BE949_24330 AQV54095 4370490 4371122 - hypothetical_protein BE949_24335 AQV54096 4371335 4371607 - phosphocarrier_protein_NPr BE949_24340 AQV54097 4371604 4372458 - RNase_adaptor_protein_RapZ BE949_24345 AQV54098 4372504 4372995 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN BE949_24350 AQV54099 4373113 4373400 - ribosome_hibernation_promoting_factor BE949_24355 AQV54100 4373423 4374856 - RNA_polymerase_sigma-54_factor BE949_24360 AQV54101 4374904 4375629 - ABC_transporter_ATP-binding_protein BE949_24365 AQV54102 4375636 4376193 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA BE949_24370 AQV54103 4376162 4376737 - LPS_export_ABC_transporter_periplasmic_protein LptC BE949_24375 AQV54104 4376734 4377300 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BE949_24380 AQV54105 4377321 4378307 - arabinose_5-phosphate_isomerase_KdsD BE949_24385 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AQV54087 97 291 100.0 2e-98 PJR32597.1 AQV54085 99 456 100.0 1e-160 PJR32599.1 AQV54083 100 611 100.0 0.0 PJR32600.1 AQV54082 100 537 100.0 0.0 >> 467. CP018770_0 Source: Escherichia coli strain 2016C-3936C1 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 1895 Table of genes, locations, strands and annotations of subject cluster: APT60725 256987 258432 + metalloprotease_TldD BUE82_01430 APT60726 258560 259489 - HTH-type_transcriptional_activator_AaeR BUE82_01435 APT60727 259672 259875 + protein_AaeX BUE82_01440 APT60728 259883 260815 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA BUE82_01445 APT60729 260821 262788 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BUE82_01450 APT60730 262880 263152 + hypothetical_protein BUE82_01455 APT60731 263208 263471 - hypothetical_protein BUE82_01460 APT60732 263836 264306 - arginine_repressor BUE82_01465 APT60733 264741 265679 + malate_dehydrogenase BUE82_01470 APT60734 265742 266809 - outer_membrane-stress_sensor_serine endopeptidase DegS BUE82_01475 APT60735 266899 268266 - serine_endoprotease_DegQ BUE82_01480 APT60736 268420 268818 - hypothetical_protein BUE82_01485 APT60737 269012 270139 + cell_division_protein_ZapE BUE82_01490 APT60738 270358 270786 + 50S_ribosomal_protein_L13 BUE82_01495 APT60739 270802 271194 + 30S_ribosomal_protein_S9 BUE82_01500 ARO49451 271112 271333 - hypothetical_protein BUE82_28950 ARO49509 271438 271647 - hypothetical_protein BUE82_28955 APT60740 271589 272227 + stringent_starvation_protein_A sspA APT60741 272233 272730 + stringent_starvation_protein_B BUE82_01510 APT60742 272774 274141 - C4-dicarboxylate_transporter BUE82_01515 BUE82_01520 274141 274251 + transposase no_locus_tag APT60743 274521 275312 + transcriptional_regulator_NanR BUE82_01525 APT60744 275434 276327 + N-acetylneuraminate_lyase BUE82_01530 APT60745 276436 277926 + MFS_transporter BUE82_01535 APT60746 277974 278663 + N-acetylmannosamine-6-phosphate_2-epimerase BUE82_01540 APT60747 278660 279535 + N-acetylmannosamine_kinase BUE82_01545 APT60748 279532 279996 + hypothetical_protein BUE82_01550 APT60749 280056 281168 - hypothetical_protein BUE82_01555 APT60750 281352 282770 - glutamate_synthase_small_subunit BUE82_01560 APT60751 282783 287243 - glutamate_synthase_large_subunit BUE82_01565 BUE82_28960 287166 287392 + hypothetical_protein no_locus_tag APT60752 287290 287526 + hypothetical_protein BUE82_01570 APT65117 287918 288847 + TIGR01212_family_radical_SAM_protein BUE82_01575 APT60753 288943 291279 + hybrid_sensor_histidine_kinase/response regulator BUE82_01580 APT60754 291509 292162 + isoprenoid_biosynthesis_protein_ElbB BUE82_01585 APT60755 292159 292887 + monofunctional_biosynthetic_peptidoglycan transglycosylase BUE82_01590 APT60756 292884 293516 - hypothetical_protein BUE82_01595 APT60757 293730 294002 - phosphocarrier_protein_NPr BUE82_01600 APT60758 293999 294853 - RNase_adaptor_protein_RapZ BUE82_01605 APT60759 294899 295390 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN BUE82_01610 APT60760 295508 295795 - ribosome_hibernation_promoting_factor BUE82_01615 APT60761 295818 297251 - RNA_polymerase_sigma-54_factor BUE82_01620 APT60762 297299 298024 - ABC_transporter_ATP-binding_protein BUE82_01625 APT60763 298031 298588 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA BUE82_01630 APT60764 298557 299132 - LPS_export_ABC_transporter_periplasmic_protein LptC BUE82_01635 APT60765 299129 299695 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BUE82_01640 APT60766 299716 300702 - arabinose_5-phosphate_isomerase_KdsD BUE82_01645 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 APT60748 97 291 100.0 2e-98 PJR32597.1 APT60746 99 456 100.0 1e-160 PJR32599.1 APT60744 100 611 100.0 0.0 PJR32600.1 APT60743 100 537 100.0 0.0 >> 468. CP018206_0 Source: Escherichia coli strain MRSN346647, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.5 Cumulative Blast bit score: 1895 Table of genes, locations, strands and annotations of subject cluster: API49125 4202171 4202737 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase BSZ13_21670 API49126 4202734 4203309 + LPS_export_ABC_transporter_periplasmic_protein LptC BSZ13_21675 API49127 4203278 4203835 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA BSZ13_21680 API49128 4203842 4204567 + LPS_export_ABC_transporter_ATP-binding_protein BSZ13_21685 API49129 4204615 4206048 + RNA_polymerase_factor_sigma-54 BSZ13_21690 API49130 4206071 4206358 + ribosomal_subunit_interface_protein BSZ13_21695 API49131 4206476 4206967 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN BSZ13_21700 API49132 4207013 4207867 + RNase_adaptor_protein_RapZ BSZ13_21705 API49133 4207864 4208136 + phosphohistidinoprotein-hexose phosphotransferase BSZ13_21710 API49134 4208349 4208981 + hypothetical_protein BSZ13_21715 API49135 4208978 4209706 - monofunctional_biosynthetic_peptidoglycan transglycosylase BSZ13_21720 API49136 4209703 4210356 - isoprenoid_biosynthesis_protein_ElbB BSZ13_21725 API49137 4210586 4212922 - aerobic_respiration_two-component_sensor histidine kinase ArcB BSZ13_21730 API50100 4213018 4213947 - TIGR01212_family_radical_SAM_protein BSZ13_21735 API49138 4214339 4214575 - hypothetical_protein BSZ13_21740 BSZ13_21745 4214473 4214699 - hypothetical_protein no_locus_tag API49139 4214622 4219082 + glutamate_synthase_large_subunit BSZ13_21750 API49140 4219095 4220513 + glutamate_synthase BSZ13_21755 API49141 4220697 4221809 + hypothetical_protein BSZ13_21760 API49142 4221869 4222333 - hypothetical_protein BSZ13_21765 API49143 4222330 4223205 - N-acetylmannosamine_kinase BSZ13_21770 API49144 4223202 4223891 - N-acetylmannosamine-6-phosphate_2-epimerase BSZ13_21775 API49145 4223939 4225429 - MFS_transporter BSZ13_21780 API49146 4225538 4226431 - N-acetylneuraminate_lyase BSZ13_21785 API49147 4226553 4227344 - transcriptional_regulator_NanR BSZ13_21790 BSZ13_21795 4227614 4227724 - transposase no_locus_tag API49148 4227724 4229091 + C4-dicarboxylate_transporter BSZ13_21800 API49149 4229135 4229632 - ClpXP_protease_specificity-enhancing_factor BSZ13_21805 API49150 4229638 4230276 - stringent_starvation_protein_A sspA API50101 4230379 4230600 - hypothetical_protein BSZ13_21815 API49151 4230671 4231063 - 30S_ribosomal_protein_S9 BSZ13_21820 API49152 4231079 4231507 - 50S_ribosomal_protein_L13 BSZ13_21825 API49153 4231726 4232853 - cell_division_protein_ZapE BSZ13_21830 API49154 4233047 4233445 + hypothetical_protein BSZ13_21835 API49155 4233599 4234966 + serine_endoprotease_DegQ BSZ13_21840 API49156 4235056 4236123 + outer_membrane-stress_sensor_serine endopeptidase DegS BSZ13_21845 API49157 4236186 4237124 - malate_dehydrogenase BSZ13_21850 API49158 4237559 4238029 + arginine_repressor BSZ13_21855 API49159 4238394 4238657 + hypothetical_protein BSZ13_21860 API49160 4238713 4238985 - hypothetical_protein BSZ13_21865 API49161 4239077 4241044 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BSZ13_21870 API49162 4241050 4241982 - efflux_transporter_periplasmic_adaptor_subunit BSZ13_21875 API49163 4241990 4242193 - transporter BSZ13_21880 API49164 4242376 4243305 + transcriptional_regulator BSZ13_21885 API49165 4243432 4244877 - metalloprotease_TldD BSZ13_21890 API49166 4245033 4248833 - TIGR02099_family_protein BSZ13_21895 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 API49142 97 291 100.0 2e-98 PJR32597.1 API49144 99 456 100.0 1e-160 PJR32599.1 API49146 100 611 100.0 0.0 PJR32600.1 API49147 100 537 100.0 0.0 >> 469. CP041416_0 Source: Escherichia coli strain STEC711 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 2737 Table of genes, locations, strands and annotations of subject cluster: QHR53861 492233 493678 + metalloprotease_TldD tldD QHR53862 493806 494735 - HTH-type_transcriptional_activator_AaeR aaeR QHR53863 494918 495121 + DUF1656_domain-containing_protein FNE87_02425 QHR53864 495129 496061 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHR53865 496067 498034 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHR53866 498126 498398 + hypothetical_protein FNE87_02440 QHR53867 498454 498717 - peroxide/acid_stress_response_protein_YhcN yhcN QHR53868 499082 499552 - transcriptional_regulator_ArgR argR QHR53869 499987 500925 + malate_dehydrogenase mdh QHR53870 500988 502055 - serine_endoprotease_DegS FNE87_02460 QHR53871 502145 503512 - serine_endoprotease_DegQ degQ QHR53872 503666 504064 - DUF1043_family_protein FNE87_02470 QHR53873 504258 505385 + cell_division_protein_ZapE FNE87_02475 QHR53874 505604 506032 + 50S_ribosomal_protein_L13 rplM QHR53875 506048 506440 + 30S_ribosomal_protein_S9 rpsI QHR53876 506358 506579 - hypothetical_protein FNE87_02490 QHR53877 506835 507473 + stringent_starvation_protein_A sspA QHR53878 507479 507976 + ClpXP_protease_specificity-enhancing_factor sspB QHR53879 508019 509386 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHR53880 509766 510557 + transcriptional_regulator_NanR nanR QHR53881 510679 511572 + N-acetylneuraminate_lyase nanA QHR53882 511681 513171 + sialic_acid_transporter_NanT nanT QHR53883 513219 513908 + N-acetylmannosamine-6-phosphate_2-epimerase FNE87_02525 QHR57620 513905 514780 + N-acetylmannosamine_kinase FNE87_02530 QHR53884 514777 515241 + DUF386_domain-containing_protein FNE87_02535 QHR53885 515301 516428 - DUF1016_domain-containing_protein FNE87_02540 QHR53886 516612 518030 - glutamate_synthase FNE87_02545 QHR57621 518043 522503 - glutamate_synthase_large_subunit gltB QHR53887 523178 524107 + TIGR01212_family_radical_SAM_protein FNE87_02555 QHR53888 524203 526539 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHR53889 526769 527422 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHR53890 527419 528147 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHR53891 528144 528776 - PhoP_regulatory_network_protein_YrbL yrbL QHR53892 528990 529262 - PTS_phosphocarrier_protein_NPr npr QHR53893 529259 530113 - RNase_adapter_RapZ rapZ QHR53894 530159 530650 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHR53895 530768 531055 - ribosome_hibernation_promoting_factor FNE87_02595 QHR53896 531078 532511 - RNA_polymerase_factor_sigma-54 rpoN QHR53897 532559 533284 - LPS_export_ABC_transporter_ATP-binding_protein lptB QHR53898 533291 533848 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHR53899 533817 534392 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHR53900 534389 534955 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHR53901 534976 535962 - arabinose-5-phosphate_isomerase_KdsD kdsD QHR53902 535976 536953 - calcium/sodium_antiporter FNE87_02630 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHR53885 92 701 107.449856734 0.0 PJR32596.1 QHR57620 97 509 100.0 2e-179 PJR32598.1 QHR53882 99 990 100.0 0.0 PJR32600.1 QHR53880 100 537 100.0 0.0 >> 470. CP021722_0 Source: Escherichia coli strain AR_0128, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 2737 Table of genes, locations, strands and annotations of subject cluster: ARX54846 750138 751583 + metalloprotease_TldD AM375_06145 ARX54847 751711 752640 - HTH-type_transcriptional_activator_AaeR AM375_06150 ARX54848 752823 753026 + protein_AaeX AM375_06155 ARX54849 753034 753966 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA AM375_06160 ARX54850 753972 755939 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB AM375_06165 ARX54851 756031 756303 + hypothetical_protein AM375_06170 ARX54852 756359 756622 - hypothetical_protein AM375_06175 ARX54853 756987 757457 - arginine_repressor AM375_06180 ARX54854 757892 758830 + malate_dehydrogenase AM375_06185 ARX54855 758893 759960 - outer_membrane-stress_sensor_serine endopeptidase DegS AM375_06190 ARX54856 760050 761417 - periplasmic_pH-dependent_serine_endoprotease DegQ AM375_06195 ARX54857 761571 761969 - hypothetical_protein AM375_06200 ARX54858 762163 763290 + cell_division_protein_ZapE AM375_06205 ARX54859 763509 763937 + 50S_ribosomal_protein_L13 AM375_06210 ARX54860 763953 764345 + 30S_ribosomal_protein_S9 AM375_06215 ARX54861 764263 764484 - hypothetical_protein AM375_06220 ARX58747 764589 764798 - hypothetical_protein AM375_06225 ARX54862 764740 765378 + stringent_starvation_protein_A sspA ARX54863 765384 765881 + stringent_starvation_protein_B AM375_06235 ARX54864 765924 767291 - C4-dicarboxylate_transporter AM375_06240 AM375_06245 767291 767401 + transposase no_locus_tag ARX54865 767671 768462 + transcriptional_regulator_NanR AM375_06250 ARX54866 768584 769477 + N-acetylneuraminate_lyase AM375_06255 ARX54867 769586 771076 + MFS_transporter AM375_06260 ARX54868 771124 771813 + N-acetylmannosamine-6-phosphate_2-epimerase AM375_06265 ARX54869 771810 772685 + N-acetylmannosamine_kinase AM375_06270 ARX54870 772682 773146 + hypothetical_protein AM375_06275 ARX54871 773206 774333 - hypothetical_protein AM375_06280 ARX54872 774517 775935 - glutamate_synthase AM375_06285 ARX54873 775948 780408 - glutamate_synthase AM375_06290 AM375_06295 780331 780557 + hypothetical_protein no_locus_tag ARX54874 780455 780691 + hypothetical_protein AM375_06300 ARX58748 781083 782012 + TIGR01212_family_radical_SAM_protein AM375_06305 ARX54875 782108 784444 + hybrid_sensor_histidine_kinase/response regulator AM375_06310 ARX54876 784674 785327 + glutamine_amidotransferase AM375_06315 ARX54877 785324 786052 + monofunctional_biosynthetic_peptidoglycan transglycosylase AM375_06320 ARX54878 786049 786681 - hypothetical_protein AM375_06325 ARX54879 786895 787167 - phosphocarrier_protein_NPr AM375_06330 ARX54880 787164 788018 - RNase_adaptor_protein_RapZ AM375_06335 ARX54881 788064 788555 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN AM375_06340 ARX54882 788673 788960 - ribosome_hibernation_promoting_factor AM375_06345 ARX54883 788983 790416 - RNA_polymerase_sigma-54_factor AM375_06350 ARX54884 790464 791189 - ABC_transporter_ATP-binding_protein AM375_06355 ARX54885 791196 791753 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA AM375_06360 ARX54886 791722 792297 - LPS_export_ABC_transporter_periplasmic_protein LptC AM375_06365 ARX54887 792294 792860 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC AM375_06370 ARX54888 792881 793867 - arabinose_5-phosphate_isomerase_KdsD AM375_06375 ARX54889 793881 794858 - calcium/sodium_antiporter AM375_06380 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ARX54871 92 701 107.449856734 0.0 PJR32596.1 ARX54869 97 509 100.0 2e-179 PJR32598.1 ARX54867 99 990 100.0 0.0 PJR32600.1 ARX54865 100 537 100.0 0.0 >> 471. CP021535_0 Source: Escherichia coli strain AR_0119, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 2737 Table of genes, locations, strands and annotations of subject cluster: ARW91030 973396 974841 + metalloprotease_TldD AM366_05015 ARW91031 974969 975898 - HTH-type_transcriptional_activator_AaeR AM366_05020 ARW91032 976081 976284 + protein_AaeX AM366_05025 ARW91033 976292 977224 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA AM366_05030 ARW91034 977230 979197 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB AM366_05035 ARW91035 979289 979561 + hypothetical_protein AM366_05040 ARW94829 979617 979880 - hypothetical_protein AM366_05045 ARW91036 980244 980714 - arginine_repressor AM366_05050 ARW91037 981149 982087 + malate_dehydrogenase AM366_05055 ARW91038 982150 983217 - outer_membrane-stress_sensor_serine endopeptidase DegS AM366_05060 ARW91039 983307 984674 - periplasmic_pH-dependent_serine_endoprotease DegQ AM366_05065 ARW91040 984828 985226 - hypothetical_protein AM366_05070 ARW91041 985420 986547 + cell_division_protein_ZapE AM366_05075 ARW91042 986766 987194 + 50S_ribosomal_protein_L13 AM366_05080 ARW91043 987210 987602 + 30S_ribosomal_protein_S9 AM366_05085 ARW91044 987520 987741 - hypothetical_protein AM366_05090 ARW94830 987846 988055 - hypothetical_protein AM366_05095 ARW91045 987997 988635 + stringent_starvation_protein_A sspA ARW91046 988641 989138 + stringent_starvation_protein_B AM366_05105 ARW91047 989181 990548 - C4-dicarboxylate_transporter AM366_05110 AM366_05115 990548 990658 + transposase no_locus_tag ARW91048 990928 991719 + transcriptional_regulator_NanR AM366_05120 ARW91049 991841 992734 + N-acetylneuraminate_lyase AM366_05125 ARW91050 992843 994333 + MFS_transporter AM366_05130 ARW91051 994381 995070 + N-acetylmannosamine-6-phosphate_2-epimerase AM366_05135 ARW91052 995067 995942 + N-acetylmannosamine_kinase AM366_05140 ARW91053 995939 996403 + hypothetical_protein AM366_05145 ARW91054 996463 997590 - hypothetical_protein AM366_05150 ARW91055 997774 999192 - glutamate_synthase AM366_05155 ARW91056 999205 1003665 - glutamate_synthase AM366_05160 AM366_05165 1003588 1003814 + hypothetical_protein no_locus_tag ARW91057 1003712 1003948 + hypothetical_protein AM366_05170 ARW94831 1004340 1005269 + TIGR01212_family_radical_SAM_protein AM366_05175 ARW91058 1005365 1007701 + hybrid_sensor_histidine_kinase/response regulator AM366_05180 ARW91059 1007931 1008584 + glutamine_amidotransferase AM366_05185 ARW91060 1008581 1009309 + monofunctional_biosynthetic_peptidoglycan transglycosylase AM366_05190 ARW91061 1009306 1009938 - hypothetical_protein AM366_05195 ARW91062 1010152 1010424 - phosphocarrier_protein_NPr AM366_05200 ARW91063 1010421 1011275 - RNase_adaptor_protein_RapZ AM366_05205 ARW91064 1011321 1011812 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN AM366_05210 ARW91065 1011930 1012217 - ribosome_hibernation_promoting_factor AM366_05215 ARW91066 1012240 1013673 - RNA_polymerase_sigma-54_factor AM366_05220 ARW91067 1013721 1014446 - ABC_transporter_ATP-binding_protein AM366_05225 ARW91068 1014453 1015010 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA AM366_05230 ARW91069 1014979 1015554 - LPS_export_ABC_transporter_periplasmic_protein LptC AM366_05235 ARW91070 1015551 1016117 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC AM366_05240 ARW91071 1016138 1017124 - arabinose_5-phosphate_isomerase_KdsD AM366_05245 ARW91072 1017138 1018115 - calcium/sodium_antiporter AM366_05250 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ARW91054 92 701 107.449856734 0.0 PJR32596.1 ARW91052 97 509 100.0 2e-179 PJR32598.1 ARW91050 99 990 100.0 0.0 PJR32600.1 ARW91048 100 537 100.0 0.0 >> 472. CP024821_0 Source: Escherichia coli strain CREC-591 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 2736 Table of genes, locations, strands and annotations of subject cluster: ATX10559 3525315 3526760 + metalloprotease_TldD CU078_18650 ATX10560 3526888 3527817 - HTH-type_transcriptional_activator_AaeR CU078_18655 ATX10561 3528000 3528203 + protein_AaeX CU078_18660 ATX10562 3528211 3529143 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CU078_18665 ATX10563 3529149 3531116 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CU078_18670 ATX10564 3531208 3531480 + hypothetical_protein CU078_18675 ATX10565 3531536 3531799 - DUF1471_domain-containing_protein CU078_18680 ATX10566 3532164 3532634 - arginine_repressor CU078_18685 ATX10567 3533069 3534007 + malate_dehydrogenase CU078_18690 ATX10568 3534070 3535137 - outer_membrane-stress_sensor_serine endopeptidase DegS CU078_18695 ATX10569 3535227 3536594 - periplasmic_pH-dependent_serine_endoprotease DegQ CU078_18700 ATX10570 3536748 3537146 - hypothetical_protein CU078_18705 ATX10571 3537340 3538467 + cell_division_protein_ZapE CU078_18710 ATX10572 3538686 3539114 + 50S_ribosomal_protein_L13 CU078_18715 ATX10573 3539130 3539522 + 30S_ribosomal_protein_S9 CU078_18720 ATX10574 3539440 3539661 - hypothetical_protein CU078_18725 ATX12151 3539635 3539814 + hypothetical_protein CU078_18730 ATX12150 3539766 3539975 - hypothetical_protein CU078_18735 ATX10575 3539917 3540555 + stringent_starvation_protein_A CU078_18740 ATX10576 3540561 3541058 + stringent_starvation_protein_B CU078_18745 ATX10577 3541101 3542468 - C4-dicarboxylate_transporter CU078_18750 CU078_18755 3542468 3542578 + transposase no_locus_tag ATX10578 3542848 3543639 + transcriptional_regulator_NanR nanR ATX10579 3543761 3544654 + N-acetylneuraminate_lyase nanA ATX10580 3544763 3546253 + MFS_transporter CU078_18770 ATX10581 3546301 3546990 + N-acetylmannosamine-6-phosphate_2-epimerase CU078_18775 ATX10582 3546987 3547862 + N-acetylmannosamine_kinase CU078_18780 ATX10583 3547859 3548323 + YhcH/YjgK/YiaL_family_protein CU078_18785 ATX10584 3548383 3549510 - DUF1016_domain-containing_protein CU078_18790 ATX10585 3549694 3551112 - glutamate_synthase CU078_18795 ATX10586 3551125 3555585 - glutamate_synthase_large_subunit CU078_18800 CU078_18805 3555508 3555734 + hypothetical_protein no_locus_tag ATX10587 3555632 3555868 + hypothetical_protein CU078_18810 ATX12152 3556260 3557189 + TIGR01212_family_radical_SAM_protein CU078_18815 ATX10588 3557285 3559621 + hybrid_sensor_histidine_kinase/response regulator CU078_18820 ATX10589 3559851 3560504 + glutamine_amidotransferase CU078_18825 ATX10590 3560501 3561229 + monofunctional_biosynthetic_peptidoglycan transglycosylase CU078_18830 ATX10591 3561226 3561858 - protein_YrbL yrbL ATX10592 3562072 3562344 - phosphocarrier_protein_NPr CU078_18840 ATX10593 3562341 3563195 - RNase_adaptor_protein_RapZ CU078_18845 ATX10594 3563241 3563732 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN CU078_18850 ATX10595 3563850 3564137 - ribosome_hibernation_promoting_factor CU078_18855 ATX10596 3564160 3565593 - RNA_polymerase_sigma-54_factor CU078_18860 ATX10597 3565641 3566366 - ABC_transporter_ATP-binding_protein lptB ATX10598 3566373 3566930 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA CU078_18870 ATX10599 3566899 3567474 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC ATX10600 3567471 3568037 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC CU078_18880 ATX10601 3568058 3569044 - arabinose_5-phosphate_isomerase_KdsD CU078_18885 ATX10602 3569058 3570035 - calcium/sodium_antiporter CU078_18890 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ATX10584 92 701 107.449856734 0.0 PJR32596.1 ATX10582 97 508 100.0 6e-179 PJR32598.1 ATX10580 99 990 100.0 0.0 PJR32600.1 ATX10578 100 537 100.0 0.0 >> 473. CP023541_0 Source: Escherichia coli O104:H21 str. CFSAN002236 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 2736 Table of genes, locations, strands and annotations of subject cluster: ATG63757 4360439 4361425 + arabinose_5-phosphate_isomerase_KdsD AWA97_22385 ATG63758 4361446 4362012 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC AWA97_22390 ATG63759 4362009 4362584 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC ATG63760 4362553 4363110 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA AWA97_22400 ATG63761 4363117 4363842 + ABC_transporter_ATP-binding_protein lptB ATG63762 4363890 4365323 + RNA_polymerase_sigma-54_factor AWA97_22410 ATG63763 4365346 4365633 + ribosome_hibernation_promoting_factor AWA97_22415 ATG63764 4365751 4366242 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN AWA97_22420 ATG63765 4366288 4367142 + RNase_adaptor_protein_RapZ AWA97_22425 ATG63766 4367139 4367411 + phosphocarrier_protein_NPr AWA97_22430 ATG63767 4367625 4368257 + hypothetical_protein AWA97_22435 ATG63768 4368254 4368982 - monofunctional_biosynthetic_peptidoglycan transglycosylase AWA97_22440 ATG63769 4368979 4369632 - glutamine_amidotransferase AWA97_22445 ATG63770 4369862 4372198 - hybrid_sensor_histidine_kinase/response regulator AWA97_22450 ATG64438 4372294 4373223 - TIGR01212_family_radical_SAM_protein AWA97_22455 ATG63771 4373615 4373851 - hypothetical_protein AWA97_22460 AWA97_22465 4373749 4373975 - hypothetical_protein no_locus_tag ATG63772 4373898 4378358 + glutamate_synthase_large_subunit AWA97_22470 ATG63773 4378371 4379789 + glutamate_synthase AWA97_22475 ATG63774 4379973 4381100 + DUF1016_domain-containing_protein AWA97_22480 ATG63775 4381160 4381624 - YhcH/YjgK/YiaL_family_protein AWA97_22485 ATG63776 4381621 4382496 - N-acetylmannosamine_kinase AWA97_22490 ATG63777 4382493 4383182 - N-acetylmannosamine-6-phosphate_2-epimerase AWA97_22495 ATG63778 4383230 4384720 - MFS_transporter AWA97_22500 ATG63779 4384829 4385722 - N-acetylneuraminate_lyase nanA ATG63780 4385844 4386635 - transcriptional_regulator_NanR AWA97_22510 AWA97_22515 4386905 4387015 - transposase no_locus_tag ATG63781 4387015 4388382 + C4-dicarboxylate_transporter AWA97_22520 ATG63782 4388425 4388922 - stringent_starvation_protein_B AWA97_22525 ATG63783 4388928 4389566 - stringent_starvation_protein_A AWA97_22530 ATG63784 4389508 4389717 + hypothetical_protein AWA97_22535 ATG64439 4389669 4389848 - hypothetical_protein AWA97_22540 ATG63785 4389822 4390043 + hypothetical_protein AWA97_22545 ATG63786 4389961 4390353 - 30S_ribosomal_protein_S9 AWA97_22550 ATG63787 4390369 4390797 - 50S_ribosomal_protein_L13 AWA97_22555 ATG63788 4391016 4392143 - cell_division_protein_ZapE AWA97_22560 ATG63789 4392337 4392735 + hypothetical_protein AWA97_22565 ATG63790 4392889 4394256 + periplasmic_pH-dependent_serine_endoprotease DegQ AWA97_22570 ATG63791 4394346 4395413 + outer_membrane-stress_sensor_serine endopeptidase DegS AWA97_22575 ATG63792 4395476 4396414 - malate_dehydrogenase AWA97_22580 ATG63793 4396849 4397319 + arginine_repressor AWA97_22585 ATG63794 4397684 4397947 + hypothetical_protein AWA97_22590 ATG63795 4398003 4398275 - hypothetical_protein AWA97_22595 ATG63796 4398367 4400334 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB AWA97_22600 ATG63797 4400340 4401272 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA AWA97_22605 ATG63798 4401280 4401483 - protein_AaeX AWA97_22610 ATG63799 4401666 4402595 + HTH-type_transcriptional_activator_AaeR AWA97_22615 ATG63800 4402729 4404174 - metalloprotease_TldD AWA97_22620 ATG63801 4404604 4408404 - DUF3971_domain-containing_protein AWA97_22625 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ATG63774 91 699 107.449856734 0.0 PJR32596.1 ATG63776 97 510 100.0 6e-180 PJR32598.1 ATG63778 99 990 100.0 0.0 PJR32600.1 ATG63780 100 537 100.0 0.0 >> 474. CP009106_0 Source: Escherichia coli strain 94-3024, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 2736 Table of genes, locations, strands and annotations of subject cluster: AIZ88837 4360436 4361422 + D-arabinose_5-phosphate_isomerase HW43_20945 AIZ88838 4361443 4362009 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase HW43_20950 AIZ88839 4362006 4362581 + lipopolysaccharide_transporter HW43_20955 AIZ88840 4362550 4363107 + lipopolysaccharide_transporter HW43_20960 AIZ88841 4363114 4363839 + sugar_ABC_transporter_ATP-binding_protein HW43_20965 AIZ88842 4363887 4365320 + RNA_polymerase_factor_sigma-54 HW43_20970 AIZ88843 4365343 4365630 + ribosome_hibernation_promoting_factor_HPF HW43_20975 AIZ88844 4365748 4366239 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) HW43_20980 AIZ88845 4366285 4367139 + glmZ(sRNA)-inactivating_NTPase HW43_20985 AIZ88846 4367136 4367408 + phosphohistidinoprotein-hexose phosphotransferase HW43_20990 AIZ88847 4367622 4368254 + hypothetical_protein HW43_20995 AIZ88848 4368251 4368979 - peptidoglycan_transglycosylase mtgA AIZ88849 4368976 4369629 - isoprenoid_biosynthesis_protein HW43_21005 AIZ88850 4369859 4372195 - aerobic_respiration_control_sensor_protein_ArcB HW43_21010 AIZ88851 4372291 4373220 - hypothetical_protein HW43_21015 AIZ88852 4373895 4378355 + glutamate_synthase gltB AIZ88853 4378368 4379786 + glutamate_synthase HW43_21030 AIZ88854 4379970 4381097 + hypothetical_protein HW43_21035 AIZ88855 4381157 4381621 - hypothetical_protein HW43_21040 AIZ88856 4381618 4382493 - N-acetylmannosamine_kinase HW43_21045 AIZ88857 4382490 4383179 - N-acetylmannosamine-6-phosphate_2-epimerase HW43_21050 AIZ88858 4383227 4384717 - sialic_acid_transporter HW43_21055 AIZ88859 4384826 4385719 - N-acetylneuraminate_lyase HW43_21060 AIZ88860 4385841 4386632 - transcriptional_regulator_NanR HW43_21065 AIZ88861 4387012 4388379 + C4-dicarboxylate_transporter HW43_21070 AIZ88862 4388422 4388919 - Clp_protease_ClpP HW43_21075 AIZ88863 4388925 4389563 - stringent_starvation_protein_A sspA AIZ88864 4389958 4390350 - 30S_ribosomal_protein_S9 HW43_21085 AIZ88865 4390366 4390794 - 50S_ribosomal_protein_L13 HW43_21090 AIZ88866 4391013 4392140 - hypothetical_protein HW43_21095 AIZ88867 4392334 4392732 + hypothetical_protein HW43_21100 AIZ88868 4392886 4394253 + serine_endoprotease_DegQ HW43_21105 AIZ88869 4394343 4395410 + serine_endoprotease HW43_21110 AIZ88870 4395473 4396411 - malate_dehydrogenase HW43_21115 AIZ88871 4396846 4397316 + arginine_repressor HW43_21120 AIZ88872 4397681 4397944 + membrane_protein HW43_21125 AIZ88873 4398000 4398272 - hypothetical_protein HW43_21130 AIZ88874 4398364 4400331 - p-hydroxybenzoic_acid_efflux_subunit_AaeB HW43_21135 AIZ88875 4400337 4401269 - p-hydroxybenzoic_acid_efflux_subunit_AaeA HW43_21140 AIZ88876 4401277 4401480 - transporter HW43_21145 AIZ88877 4401663 4402592 + transcriptional_regulator HW43_21150 AIZ88878 4402726 4404171 - protease_TldD tldD AIZ88879 4404601 4408401 - hypothetical_protein HW43_21160 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AIZ88854 91 699 107.449856734 0.0 PJR32596.1 AIZ88856 97 510 100.0 6e-180 PJR32598.1 AIZ88858 99 990 100.0 0.0 PJR32600.1 AIZ88860 100 537 100.0 0.0 >> 475. CP010122_0 Source: Escherichia coli strain C5, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 2735 Table of genes, locations, strands and annotations of subject cluster: APJ78601 4164852 4165838 + D-arabinose_5-phosphate_isomerase RG28_21105 APJ78602 4165859 4166425 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG28_21110 APJ78603 4166422 4166997 + lipopolysaccharide_transporter RG28_21115 APJ78604 4166966 4167523 + lipopolysaccharide_transporter RG28_21120 APJ78605 4167530 4168255 + sugar_ABC_transporter_ATP-binding_protein RG28_21125 APJ78606 4168303 4169736 + RNA_polymerase_factor_sigma-54 RG28_21130 APJ78607 4169759 4170046 + ribosome_hibernation_promoting_factor_HPF RG28_21135 APJ78608 4170164 4170655 + PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG28_21140 APJ78609 4170701 4171555 + glmZ(sRNA)-inactivating_NTPase RG28_21145 APJ78610 4171552 4171824 + phosphohistidinoprotein-hexose phosphotransferase RG28_21150 APJ78611 4172038 4172670 + hypothetical_protein RG28_21155 APJ78612 4172667 4173395 - peptidoglycan_transglycosylase mtgA APJ78613 4173392 4174045 - isoprenoid_biosynthesis_protein RG28_21165 APJ78614 4174275 4176611 - aerobic_respiration_control_sensor_protein_ArcB RG28_21170 APJ79849 4176707 4177636 - hypothetical_protein RG28_21175 APJ79850 4178311 4182771 + glutamate_synthase gltB APJ78615 4182784 4184202 + glutamate_synthase RG28_21185 APJ78616 4184386 4185513 + hypothetical_protein RG28_21190 APJ78617 4185573 4186037 - hypothetical_protein RG28_21195 APJ78618 4186034 4186909 - N-acetylmannosamine_kinase RG28_21200 APJ78619 4186906 4187595 - N-acetylmannosamine-6-phosphate_2-epimerase RG28_21205 APJ78620 4187643 4189133 - sialic_acid_transporter RG28_21210 APJ78621 4189242 4190135 - N-acetylneuraminate_lyase RG28_21215 APJ78622 4190257 4191048 - transcriptional_regulator_NanR RG28_21220 APJ78623 4191428 4192795 + C4-dicarboxylate_transporter RG28_21225 APJ78624 4192838 4193335 - Clp_protease_ClpP RG28_21230 APJ78625 4193341 4193979 - stringent_starvation_protein_A sspA APJ78626 4194374 4194766 - 30S_ribosomal_protein_S9 RG28_21240 APJ78627 4194782 4195210 - 50S_ribosomal_protein_L13 RG28_21245 APJ78628 4195429 4196556 - hypothetical_protein RG28_21250 APJ78629 4196750 4197148 + hypothetical_protein RG28_21255 APJ78630 4197302 4198669 + serine_endoprotease_DegQ RG28_21260 APJ78631 4198759 4199826 + serine_endoprotease RG28_21265 APJ78632 4199889 4200827 - malate_dehydrogenase RG28_21270 APJ78633 4201262 4201732 + arginine_repressor RG28_21275 APJ78634 4202097 4202360 + membrane_protein RG28_21280 APJ78635 4202416 4202688 - hypothetical_protein RG28_21285 APJ78636 4202780 4204747 - p-hydroxybenzoic_acid_efflux_subunit_AaeB RG28_21290 APJ78637 4204753 4205685 - p-hydroxybenzoic_acid_efflux_subunit_AaeA RG28_21295 APJ79851 4205693 4205896 - transporter RG28_21300 APJ78638 4206079 4207008 + transcriptional_regulator RG28_21305 APJ78639 4207136 4208581 - protease_TldD tldD APJ78640 4208737 4212537 - hypothetical_protein RG28_21315 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APJ78616 91 699 107.449856734 0.0 PJR32596.1 APJ78618 97 509 100.0 2e-179 PJR32598.1 APJ78620 99 990 100.0 0.0 PJR32600.1 APJ78622 100 537 100.0 0.0 >> 476. CP020753_0 Source: Shigella flexneri 1c strain Y394 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 2137 Table of genes, locations, strands and annotations of subject cluster: ATH69404 3304383 3304670 + ribosome_hibernation_promoting_factor B7485_18110 ATH69405 3304788 3305279 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN ATH69406 3305325 3306179 + RNase_adapter_RapZ rapZ ATH69407 3306176 3306448 + PTS_phosphocarrier_protein_NPr npr ATH69408 3306661 3307293 + PhoP_regulatory_network_protein_YrbL yrbL ATH69409 3308014 3308667 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB ATH69410 3308897 3311233 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB ATH70635 3311329 3312258 - TIGR01212_family_radical_SAM_protein B7485_18150 ATH69412 3312933 3317393 + glutamate_synthase_large_subunit gltB ATH69413 3317406 3318824 + NAD(P)-binding_protein B7485_18170 ATH69414 3319008 3319487 + DUF1016_domain-containing_protein B7485_18175 B7485_25330 3319475 3319546 - MerR_family_transcriptional_regulator no_locus_tag B7485_18180 3319562 3320725 + IS3_family_transposase no_locus_tag ATH69415 3321116 3321580 - DUF386_domain-containing_protein B7485_18185 ATH69416 3321577 3322452 - N-acetylmannosamine_kinase B7485_18190 ATH69417 3322449 3323138 - N-acetylmannosamine-6-phosphate_2-epimerase B7485_18195 ATH69418 3323186 3324676 - sialic_acid_transporter_NanT nanT ATH69419 3324786 3325679 - N-acetylneuraminate_lyase nanA ATH69420 3325801 3326592 - transcriptional_regulator_NanR nanR B7485_18215 3327030 3327727 + IS1_family_transposase no_locus_tag ATH69421 3327748 3329115 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC ATH69422 3329158 3329655 - ClpXP_protease_specificity-enhancing_factor sspB ATH69423 3329661 3330299 - stringent_starvation_protein_A sspA ATH69425 3330694 3331086 - 30S_ribosomal_protein_S9 rpsI ATH69426 3331102 3331530 - 50S_ribosomal_protein_L13 rplM ATH69427 3331749 3332876 - cell_division_protein_ZapE B7485_18250 ATH69428 3333070 3333468 + DUF1043_family_protein B7485_18255 degQ 3333622 3334969 + serine_endoprotease_DegQ no_locus_tag ATH69429 3335059 3336126 + outer_membrane-stress_sensor_serine endopeptidase DegS degS ATH69430 3336188 3337126 - malate_dehydrogenase mdh ATH69431 3337561 3338031 + transcriptional_regulator_ArgR argR ATH70636 3338396 3338659 + peroxide/acid_stress_response_protein_YhcN yhcN ATH69432 3338715 3338987 - hypothetical_protein B7485_18285 ATH69433 3339079 3341046 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB ATH69434 3341052 3341984 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA ATH69435 3341992 3342195 - DUF1656_domain-containing_protein B7485_18300 ATH69436 3342378 3343307 + HTH-type_transcriptional_activator_AaeR aaeR ATH69437 3343435 3344880 - metalloprotease_TldD tldD ATH69438 3345036 3348836 - AsmA2_domain-containing_protein B7485_18315 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32598.1 ATH69418 99 990 100.0 0.0 PJR32599.1 ATH69419 100 611 100.0 0.0 PJR32600.1 ATH69420 99 536 100.0 0.0 >> 477. CP010191_0 Source: Escherichia coli strain M8, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 2057 Table of genes, locations, strands and annotations of subject cluster: APL08628 2030490 2031935 + protease_TldD tldD APL08629 2032063 2032992 - transcriptional_regulator RG57_09945 APL11244 2033175 2033378 + transporter RG57_09950 APL08630 2033386 2034318 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG57_09955 APL08631 2034324 2036291 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG57_09960 APL08632 2036383 2036655 + hypothetical_protein RG57_09965 APL08633 2036711 2036974 - membrane_protein RG57_09970 APL08634 2037339 2037809 - arginine_repressor RG57_09975 APL08635 2038244 2039182 + malate_dehydrogenase RG57_09980 APL08636 2039245 2040312 - serine_endoprotease RG57_09985 APL08637 2040402 2041769 - serine_endoprotease_DegQ RG57_09990 APL08638 2041923 2042321 - hypothetical_protein RG57_09995 APL08639 2042515 2043642 + hypothetical_protein RG57_10000 APL08640 2043861 2044289 + 50S_ribosomal_protein_L13 RG57_10005 APL08641 2044305 2044697 + 30S_ribosomal_protein_S9 RG57_10010 APL08642 2045092 2045730 + stringent_starvation_protein_A sspA APL08643 2045736 2046233 + Clp_protease_ClpP RG57_10020 APL08644 2046276 2047643 - C4-dicarboxylate_transporter RG57_10025 APL08645 2048023 2048814 + transcriptional_regulator_NanR RG57_10030 APL08646 2048936 2049829 + N-acetylneuraminate_lyase RG57_10035 APL08647 2049939 2051429 + sialic_acid_transporter RG57_10040 APL08648 2051477 2052166 + N-acetylmannosamine-6-phosphate_2-epimerase RG57_10045 APL08649 2052163 2053038 + N-acetylmannosamine_kinase RG57_10050 APL08650 2053035 2053499 + hypothetical_protein RG57_10055 APL08651 2054862 2056280 - glutamate_synthase RG57_10065 APL11245 2056293 2060753 - glutamate_synthase gltB APL11246 2061428 2062357 + hypothetical_protein RG57_10075 APL08652 2062453 2064789 + aerobic_respiration_control_sensor_protein_ArcB RG57_10080 APL08653 2065019 2065672 + isoprenoid_biosynthesis_protein RG57_10085 APL08654 2065669 2066397 + peptidoglycan_transglycosylase mtgA APL08655 2066394 2067026 - hypothetical_protein RG57_10095 APL08656 2067240 2067512 - phosphohistidinoprotein-hexose phosphotransferase RG57_10100 APL08657 2067509 2068363 - glmZ(sRNA)-inactivating_NTPase RG57_10105 APL08658 2068409 2068900 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG57_10110 APL08659 2069018 2069305 - ribosome_hibernation_promoting_factor_HPF RG57_10115 APL08660 2069328 2070761 - RNA_polymerase_factor_sigma-54 RG57_10120 APL08661 2070809 2071534 - sugar_ABC_transporter_ATP-binding_protein RG57_10125 APL08662 2071541 2072098 - lipopolysaccharide_transporter RG57_10130 APL08663 2072067 2072642 - lipopolysaccharide_transporter RG57_10135 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32597.1 APL08648 99 456 100.0 1e-160 PJR32598.1 APL08647 99 990 100.0 0.0 PJR32599.1 APL08646 100 611 100.0 0.0 >> 478. AP021895_0 Source: Escherichia coli 2018-11-3CC DNA, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1952 Table of genes, locations, strands and annotations of subject cluster: BBP33241 524737 526182 + metalloprotease_TldD tldD BBP33242 526316 527245 - HTH-type_transcriptional_activator_AaeR aaeR BBP33243 527359 527631 + efflux_system_membrane_protein VEGS11_04980 BBP33244 527639 528571 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA BBP33245 528577 530544 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB BBP33246 530636 530908 + hypothetical_protein yhcO BBP33247 530964 531278 - membrane_protein VEGS11_05020 BBP33248 531592 532062 - arginine_repressor argR BBP33249 532497 533435 + malate_dehydrogenase mdh BBP33250 533498 534565 - serine_endoprotease_DegS degS BBP33251 534655 536022 - periplasmic_pH-dependent_serine_endoprotease DegQ degQ BBP33252 536176 536574 - putative_cytochrome_d_ubiquinol_oxidase_subunit 3 yhcB BBP33253 536924 537895 + cell_division_protein_ZapE zapE BBP33254 538114 538542 + 50S_ribosomal_protein_L13 rplM BBP33255 538558 538950 + 30S_ribosomal_protein_S9 rpsI BBP33256 539345 539983 + stringent_starvation_protein_A sspA BBP33257 539989 540486 + stringent_starvation_protein_B sspB BBP33258 540528 541895 - C4-dicarboxylate_ABC_transporter dcuD BBP33259 542284 543066 + transcriptional_regulator_NanR nanR BBP33260 543188 544081 + N-acetylneuraminate_lyase nanA BBP33261 544191 545681 + putative_sialic_acid_transporter nanT BBP33262 545729 546418 + putative_N-acetylmannosamine-6-phosphate 2-epimerase nanE BBP33263 546415 547290 + N-acetylmannosamine_kinase nanK BBP33264 547287 547751 + hypothetical_protein yhcH BBP33265 547811 548359 - hypothetical_protein VEGS11_05200 BBP33266 549123 549839 - hypothetical_protein yhcF BBP33267 549836 550381 - hypothetical_protein yhcE BBP33268 550378 552759 - putative_outer_membrane_usher_protein_YhcD yhcD BBP33269 552780 553454 - putative_fimbrial_chaperone_YhcA yhcA BBP33270 553626 554390 - protein_GltF gltF BBP33271 554949 556367 - glutamate_synthase_[NADPH]_small_chain gltD BBP33272 556380 560948 - glutamate_synthase gltB BBP33273 561482 562444 + TIGR01212_family_radical_SAM_protein yhcC BBP33274 562540 564876 + aerobic_respiration_control_sensor_protein_ArcB arcB BBP33275 565106 565759 + glyoxalase elbB BBP33276 565756 566484 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA BBP33277 566481 567113 - hypothetical_protein yrbL Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32596.1 BBP33263 97 507 100.0 1e-178 PJR32597.1 BBP33262 99 456 100.0 1e-160 PJR32598.1 BBP33261 99 990 100.0 0.0 >> 479. CP041520_0 Source: Escherichia coli strain 3057 chromosome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1568 Table of genes, locations, strands and annotations of subject cluster: QDN44875 776157 777143 + arabinose-5-phosphate_isomerase_KdsD kdsD QDN44876 777164 777730 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QDN44877 777727 778302 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QDN44878 778271 778828 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QDN44879 778835 779560 + LPS_export_ABC_transporter_ATP-binding_protein lptB QDN44880 779608 781041 + RNA_polymerase_factor_sigma-54 rpoN QDN44881 781064 781351 + ribosome_hibernation_promoting_factor FNJ66_03745 QDN44882 781469 781960 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QDN44883 782006 782860 + RNase_adapter_RapZ rapZ QDN44884 782857 783129 + PTS_phosphocarrier_protein_NPr npr QDN44885 783342 783974 + PhoP_regulatory_network_protein_YrbL yrbL QDN44886 783971 784699 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QDN44887 784696 785349 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QDN44888 785579 787915 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QDN44889 788011 788940 - TIGR01212_family_radical_SAM_protein FNJ66_03785 QDN48503 789615 794075 + glutamate_synthase_large_subunit gltB QDN44890 794088 795506 + glutamate_synthase_small_subunit FNJ66_03795 QDN44891 795690 796817 + DUF1016_domain-containing_protein FNJ66_03800 QDN44892 796877 797341 - DUF386_domain-containing_protein FNJ66_03805 QDN44893 797338 798213 - ROK_family_protein FNJ66_03810 QDN44894 798210 798899 - N-acetylmannosamine-6-phosphate_2-epimerase FNJ66_03815 QDN44895 798946 800436 - sialic_acid_transporter_NanT nanT QDN44896 800545 801438 - N-acetylneuraminate_lyase nanA QDN44897 801560 802351 - transcriptional_regulator_NanR nanR QDN44898 802731 804098 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QDN44899 804142 804639 - ClpXP_protease_specificity-enhancing_factor sspB QDN44900 804645 805283 - stringent_starvation_protein_A sspA QDN44901 805677 806069 - 30S_ribosomal_protein_S9 rpsI QDN44902 806085 806513 - 50S_ribosomal_protein_L13 rplM QDN44903 806732 807859 - cell_division_protein_ZapE FNJ66_03860 QDN44904 808053 808451 + DUF1043_family_protein FNJ66_03865 QDN44905 808605 809972 + serine_endoprotease_DegQ degQ QDN44906 810062 811129 + serine_endoprotease_DegS FNJ66_03875 QDN44907 811192 812130 - malate_dehydrogenase mdh QDN44908 812565 813035 + transcriptional_regulator_ArgR argR QDN44909 813400 813663 + peroxide/acid_stress_response_protein_YhcN yhcN QDN44910 813719 813991 - hypothetical_protein FNJ66_03895 QDN44911 814083 816050 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QDN44912 816056 816988 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QDN44913 816996 817199 - DUF1656_domain-containing_protein FNJ66_03910 QDN44914 817382 818311 + HTH-type_transcriptional_activator_AaeR aaeR Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QDN44891 91 698 107.449856734 0.0 PJR32595.1 QDN44892 98 311 100.0 7e-106 PJR32596.1 QDN44893 98 559 100.0 0.0 >> 480. CP021726_0 Source: Escherichia coli strain Combat11I9 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1550 Table of genes, locations, strands and annotations of subject cluster: AUX65706 3364144 3365130 + arabinose_5-phosphate_isomerase_KdsD CDC27_17120 AUX65707 3365151 3365717 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC CDC27_17125 AUX65708 3365714 3366289 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AUX65709 3366258 3366815 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA CDC27_17135 AUX65710 3366822 3367547 + ABC_transporter_ATP-binding_protein lptB AUX65711 3367595 3369028 + RNA_polymerase_sigma-54_factor CDC27_17145 AUX65712 3369051 3369338 + ribosome_hibernation_promoting_factor raiA AUX65713 3369456 3369947 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN CDC27_17155 AUX65714 3369993 3370847 + RNase_adaptor_protein_RapZ CDC27_17160 AUX65715 3370844 3371116 + phosphocarrier_protein_NPr CDC27_17165 AUX65716 3371329 3371961 + hypothetical_protein CDC27_17170 AUX65717 3371958 3372686 - monofunctional_biosynthetic_peptidoglycan transglycosylase CDC27_17175 AUX65718 3372683 3373336 - glutamine_amidotransferase CDC27_17180 AUX65719 3373566 3375902 - hybrid_sensor_histidine_kinase/response regulator CDC27_17185 AUX67335 3375998 3376927 - TIGR01212_family_radical_SAM_protein CDC27_17190 AUX65720 3377319 3377555 - hypothetical_protein CDC27_17195 CDC27_17200 3377453 3377679 - hypothetical_protein no_locus_tag AUX65721 3377602 3382062 + glutamate_synthase_large_subunit CDC27_17205 AUX65722 3382075 3383493 + glutamate_synthase_small_subunit CDC27_17210 AUX65723 3383677 3384804 + DUF1016_domain-containing_protein CDC27_17215 AUX65724 3384864 3385328 - YhcH/YjgK/YiaL_family_protein CDC27_17220 AUX65725 3385325 3386200 - N-acetylmannosamine_kinase CDC27_17225 AUX65726 3386197 3386886 - N-acetylmannosamine-6-phosphate_2-epimerase CDC27_17230 AUX65727 3386934 3388424 - MFS_transporter CDC27_17235 AUX65728 3388533 3389426 - N-acetylneuraminate_lyase nanA AUX65729 3389548 3390339 - transcriptional_regulator_NanR CDC27_17245 CDC27_17250 3390609 3390719 - transposase no_locus_tag AUX65730 3390719 3392086 + C4-dicarboxylate_transporter CDC27_17255 AUX65731 3392128 3392625 - stringent_starvation_protein_B CDC27_17260 AUX65732 3392631 3393269 - stringent_starvation_protein_A CDC27_17265 AUX65733 3393211 3393420 + hypothetical_protein CDC27_17270 AUX67336 3393372 3393551 - hypothetical_protein CDC27_17275 AUX65734 3393525 3393746 + hypothetical_protein CDC27_17280 AUX65735 3393664 3394056 - 30S_ribosomal_protein_S9 CDC27_17285 AUX65736 3394072 3394500 - 50S_ribosomal_protein_L13 CDC27_17290 AUX65737 3394719 3395846 - cell_division_protein_ZapE CDC27_17295 AUX65738 3396040 3396438 + hypothetical_protein CDC27_17300 AUX65739 3396592 3397959 + periplasmic_pH-dependent_serine_endoprotease DegQ CDC27_17305 AUX65740 3398049 3399116 + outer_membrane-stress_sensor_serine endopeptidase DegS CDC27_17310 AUX65741 3399179 3400117 - malate_dehydrogenase CDC27_17315 AUX65742 3400552 3401022 + arginine_repressor CDC27_17320 AUX65743 3401387 3401650 + hypothetical_protein CDC27_17325 AUX65744 3401706 3401978 - hypothetical_protein CDC27_17330 AUX65745 3402070 3404037 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CDC27_17335 AUX65746 3404043 3404975 - efflux_transporter_periplasmic_adaptor_subunit CDC27_17340 AUX65747 3404983 3405186 - protein_AaeX CDC27_17345 AUX65748 3405369 3406298 + HTH-type_transcriptional_activator_AaeR CDC27_17350 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AUX65723 91 699 107.449856734 0.0 PJR32595.1 AUX65724 100 318 100.0 6e-109 PJR32596.1 AUX65725 97 533 100.0 0.0 >> 481. CP041678_0 Source: Escherichia coli strain ESBL 15 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1520 Table of genes, locations, strands and annotations of subject cluster: QEO86810 486157 486360 + DUF1656_domain-containing_protein FOA56_02380 QEO86811 486368 487300 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QEO86812 487306 489273 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QEO86813 489365 489637 + hypothetical_protein FOA56_02395 QEO86814 489693 489956 - peroxide/acid_stress_response_protein_YhcN yhcN QEO86815 490320 490790 - transcriptional_regulator_ArgR argR QEO86816 491225 492163 + malate_dehydrogenase mdh QEO86817 492225 493292 - serine_endoprotease_DegS FOA56_02415 QEO86818 493382 494749 - serine_endoprotease_DegQ degQ QEO86819 494903 495301 - DUF1043_family_protein FOA56_02425 QEO86820 495495 496622 + cell_division_protein_ZapE FOA56_02430 QEO86821 496841 497269 + 50S_ribosomal_protein_L13 rplM QEO86822 497285 497677 + 30S_ribosomal_protein_S9 rpsI QEO86823 497595 497816 - hypothetical_protein FOA56_02445 QEO86824 498072 498710 + stringent_starvation_protein_A sspA QEO86825 498716 499213 + ClpXP_protease_specificity-enhancing_factor sspB QEO86826 499256 500623 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QEO86827 501003 501794 + transcriptional_regulator_NanR nanR QEO86828 501916 502809 + N-acetylneuraminate_lyase nanA QEO86829 502919 504409 + sialic_acid_transporter_NanT nanT QEO86830 504457 505146 + N-acetylmannosamine-6-phosphate_2-epimerase FOA56_02480 QEO90811 505143 506018 + ROK_family_protein FOA56_02485 QEO86831 506015 506479 + DUF386_domain-containing_protein FOA56_02490 QEO86832 506539 507666 - DUF1016_domain-containing_protein FOA56_02495 QEO86833 507850 509268 - glutamate_synthase_small_subunit FOA56_02500 QEO90812 509281 513741 - glutamate_synthase_large_subunit gltB QEO86834 514416 515345 + TIGR01212_family_radical_SAM_protein FOA56_02510 QEO86835 515441 517777 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QEO86836 518007 518660 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QEO86837 518657 519385 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QEO86838 519382 520014 - PhoP_regulatory_network_protein_YrbL yrbL QEO86839 520228 520500 - PTS_phosphocarrier_protein_NPr npr QEO86840 520497 521351 - RNase_adapter_RapZ rapZ QEO86841 521397 521888 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QEO86842 522006 522293 - ribosome_hibernation_promoting_factor FOA56_02550 QEO86843 522316 523749 - RNA_polymerase_factor_sigma-54 rpoN QEO86844 523797 524522 - LPS_export_ABC_transporter_ATP-binding_protein lptB QEO86845 524529 525086 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QEO86846 525055 525630 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QEO86847 525627 526193 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QEO86848 526214 527200 - arabinose-5-phosphate_isomerase_KdsD kdsD QEO86849 527214 528191 - calcium/sodium_antiporter FOA56_02585 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QEO86832 92 701 107.449856734 0.0 PJR32595.1 QEO86831 98 311 100.0 7e-106 PJR32596.1 QEO90811 97 508 100.0 5e-179 >> 482. LR134311_0 Source: Escherichia coli strain NCTC9113 genome assembly, chromosome: 1. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: VEE93735 484961 485164 + protein_AaeX aaeX VEE93737 485172 486104 + p-hydroxybenzoic_acid_efflux_pump_subunit_A aaeA VEE93739 486110 488077 + p-hydroxybenzoic_acid_efflux_pump_subunit_B aaeB_1 VEE93741 488169 488441 + barnase_inhibitor yhcO VEE93743 488497 488760 - protein_YcfR ycfR VEE93745 489125 489595 - arginine_repressor argR VEE93747 490030 490968 + malate_dehydrogenase mdh VEE93749 491030 492097 - protease degS VEE93751 492187 493554 - serine_endoprotease degQ VEE93752 493708 494106 - cytochrome_d_ubiquinol_oxidase_subunit_III yhcB VEE93754 494300 495427 + putative_ATP/GTP-binding_protein yhcM VEE93756 495646 496074 + 50S_ribosomal_protein_L13 rplM VEE93758 496090 496482 + 30S_ribosomal_protein_S9 rpsI VEE93760 496877 497515 + stringent_starvation_protein_A sspA VEE93762 497521 498018 + stringent_starvation_protein_B sspB VEE93763 498061 499428 - C4-dicarboxylate_transporter dcuD VEE93765 499808 500599 + GntR_family_transcriptional_regulator nanR VEE93767 500721 501614 + N-acetylneuraminate_lyase nanA VEE93769 501723 503213 + sialic_acid_transporter nanT VEE93771 503261 503950 + N-acetylmannosamine-6-phosphate_2-epimerase yhcJ VEE93772 503947 504822 + putative_transcriptional_regulator nanK VEE93774 504819 505283 + beta-galactosidase yhcH VEE93776 505343 506470 - protein yhcG VEE93778 506654 508072 - glutamate_synthase_(NADPH)_small_subunit gltD_1 VEE93780 508085 512638 - glutamate_synthase_subunit_alpha gltB VEE93782 513220 514149 + putative_radical_SAM_protein NCTC9113_00495 VEE93783 514245 516581 + aerobic_respiration_control_protein arcB VEE93785 516811 517464 + isoprenoid_biosynthesis_protein_with amidotransferase-like domain yhbL VEE93787 517461 518189 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA VEE93789 518186 518818 - protein yrbL VEE93791 519031 519303 - phosphocarrier_protein ptsO VEE93793 519300 520154 - putative_ATPase yhbJ VEE93795 520200 520691 - PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN ptsN VEE93797 520809 521096 - putative_sigma(54)_modulation_protein yhbH VEE93799 521119 522552 - RNA_polymerase_sigma-54_factor_(sigma-N) rpoN VEE93801 522600 523325 - lipopolysaccharide_ABC_transporter lptB VEE93803 523332 523889 - lipopolysaccharide_transport_periplasmic_protein LptA yhbN VEE93805 523858 524433 - putative_organic_solvent_tolerance_protein lptC VEE93807 524430 524996 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase kdsC VEE93809 525017 526003 - D-arabinose_5-phosphate_isomerase kdsD VEE93811 526017 526994 - calcium/sodium:proton_antiporter yrbG Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 VEE93776 91 698 107.449856734 0.0 PJR32595.1 VEE93774 98 311 100.0 7e-106 PJR32596.1 VEE93772 97 510 100.0 6e-180 >> 483. CP049979_0 Source: Escherichia coli strain IBS28 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: QIN56344 922674 922877 + AaeX_family_protein HAP53_04305 QIN56345 922885 923817 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QIN56346 923823 925790 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIN56347 925882 926154 + hypothetical_protein HAP53_04320 QIN56348 926210 926473 - peroxide/acid_stress_response_protein_YhcN yhcN QIN56349 926838 927308 - transcriptional_regulator_ArgR argR QIN56350 927743 928681 + malate_dehydrogenase mdh QIN56351 928743 929810 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QIN56352 929900 931267 - serine_endoprotease_DegQ degQ QIN56353 931421 931819 - DUF1043_family_protein HAP53_04350 QIN56354 932012 933139 + cell_division_protein_ZapE zapE QIN56355 933358 933786 + 50S_ribosomal_protein_L13 rplM QIN56356 933802 934194 + 30S_ribosomal_protein_S9 rpsI QIN56357 934589 935227 + stringent_starvation_protein_A sspA QIN56358 935233 935730 + ClpXP_protease_specificity-enhancing_factor sspB QIN56359 935773 937140 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIN56360 937520 938311 + transcriptional_regulator_NanR nanR QIN56361 938433 939326 + N-acetylneuraminate_lyase nanA QIN56362 939435 940925 + sialic_acid_transporter_NanT nanT QIN56363 940973 941662 + N-acetylmannosamine-6-phosphate_2-epimerase HAP53_04400 QIN56364 941659 942534 + N-acetylmannosamine_kinase nanK QIN56365 942531 942995 + DUF386_domain-containing_protein HAP53_04410 QIN56366 943055 944182 - DUF1016_domain-containing_protein HAP53_04415 QIN56367 944366 945784 - glutamate_synthase_subunit_GltD gltD QIN59853 945797 950257 - glutamate_synthase_large_subunit gltB QIN56368 950932 951861 + TIGR01212_family_radical_SAM_protein HAP53_04430 QIN56369 951957 954293 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIN56370 954523 955176 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIN56371 955173 955901 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QIN56372 955898 956530 - PhoP_regulatory_network_protein_YrbL yrbL QIN56373 956743 957015 - PTS_phosphocarrier_protein_NPr npr QIN56374 957012 957866 - RNase_adapter_RapZ rapZ QIN56375 957912 958403 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QIN56376 958521 958808 - ribosome_hibernation_promoting_factor hpf QIN56377 958831 960264 - RNA_polymerase_factor_sigma-54 rpoN QIN56378 960312 961037 - LPS_export_ABC_transporter_ATP-binding_protein lptB QIN56379 961044 961601 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QIN56380 961570 962145 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QIN56381 962142 962708 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QIN56382 962729 963715 - arabinose-5-phosphate_isomerase_KdsD kdsD QIN56383 963729 964706 - calcium/sodium_antiporter HAP53_04505 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QIN56366 91 698 107.449856734 0.0 PJR32595.1 QIN56365 98 311 100.0 7e-106 PJR32596.1 QIN56364 97 510 100.0 6e-180 >> 484. CP049936_0 Source: Escherichia coli strain JL05 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: QIM35068 3379449 3379652 + AaeX_family_protein G9V97_15905 QIM35069 3379660 3380592 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QIM35070 3380598 3382565 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QIM35071 3382657 3382929 + hypothetical_protein G9V97_15920 QIM35072 3382985 3383248 - peroxide/acid_stress_response_protein_YhcN yhcN QIM35073 3383613 3384083 - transcriptional_regulator_ArgR argR QIM35074 3384518 3385456 + malate_dehydrogenase mdh QIM35075 3385518 3386585 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QIM35076 3386675 3388042 - serine_endoprotease_DegQ degQ QIM35077 3388196 3388594 - DUF1043_family_protein G9V97_15950 QIM35078 3388788 3389915 + cell_division_protein_ZapE zapE QIM35079 3390134 3390562 + 50S_ribosomal_protein_L13 rplM QIM35080 3390578 3390970 + 30S_ribosomal_protein_S9 rpsI QIM35081 3391365 3392003 + stringent_starvation_protein_A sspA QIM35082 3392009 3392506 + ClpXP_protease_specificity-enhancing_factor sspB QIM35083 3392549 3393916 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QIM35084 3394296 3395087 + transcriptional_regulator_NanR nanR QIM35085 3395209 3396102 + N-acetylneuraminate_lyase nanA QIM35086 3396211 3397701 + sialic_acid_transporter_NanT nanT QIM35087 3397749 3398438 + N-acetylmannosamine-6-phosphate_2-epimerase G9V97_16000 QIM35088 3398435 3399310 + N-acetylmannosamine_kinase nanK QIM35089 3399307 3399771 + DUF386_domain-containing_protein G9V97_16010 QIM35090 3399831 3400958 - DUF1016_domain-containing_protein G9V97_16015 QIM35091 3401142 3402560 - glutamate_synthase_subunit_GltD gltD QIM36354 3402573 3407033 - glutamate_synthase_large_subunit gltB QIM35092 3407708 3408637 + TIGR01212_family_radical_SAM_protein G9V97_16030 QIM35093 3408733 3411069 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QIM35094 3411299 3411952 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QIM35095 3411949 3412677 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QIM35096 3412674 3413306 - PhoP_regulatory_network_protein_YrbL yrbL QIM35097 3413519 3413791 - PTS_phosphocarrier_protein_NPr npr QIM35098 3413788 3414642 - RNase_adapter_RapZ rapZ QIM35099 3414688 3415179 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QIM35100 3415297 3415584 - ribosome_hibernation_promoting_factor hpf QIM35101 3415607 3417040 - RNA_polymerase_factor_sigma-54 rpoN QIM35102 3417088 3417813 - LPS_export_ABC_transporter_ATP-binding_protein lptB QIM35103 3417820 3418377 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QIM35104 3418346 3418921 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QIM35105 3418918 3419484 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QIM35106 3419505 3420491 - arabinose-5-phosphate_isomerase_KdsD kdsD QIM35107 3420505 3421482 - calcium/sodium_antiporter G9V97_16105 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QIM35090 91 698 107.449856734 0.0 PJR32595.1 QIM35089 98 311 100.0 7e-106 PJR32596.1 QIM35088 97 510 100.0 6e-180 >> 485. CP047876_0 Source: Escherichia coli strain LD22-1 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: QHL81599 488794 488997 + DUF1656_domain-containing_protein GUU87_02345 QHL81600 489005 489937 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHL81601 489943 491910 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHL81602 492002 492274 + hypothetical_protein GUU87_02360 QHL81603 492330 492593 - peroxide/acid_stress_response_protein_YhcN yhcN QHL81604 492958 493428 - transcriptional_regulator_ArgR argR QHL81605 493863 494801 + malate_dehydrogenase mdh QHL81606 494863 495930 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QHL81607 496020 497387 - serine_endoprotease_DegQ degQ QHL81608 497541 497939 - DUF1043_family_protein GUU87_02390 QHL81609 498133 499260 + cell_division_protein_ZapE zapE QHL81610 499479 499907 + 50S_ribosomal_protein_L13 rplM QHL81611 499923 500315 + 30S_ribosomal_protein_S9 rpsI QHL81612 500710 501348 + stringent_starvation_protein_A sspA QHL81613 501354 501851 + ClpXP_protease_specificity-enhancing_factor sspB QHL81614 501894 503261 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHL81615 503641 504432 + transcriptional_regulator_NanR nanR QHL81616 504554 505447 + N-acetylneuraminate_lyase nanA QHL81617 505556 507046 + sialic_acid_transporter_NanT nanT QHL81618 507094 507783 + putative_N-acetylmannosamine-6-phosphate 2-epimerase GUU87_02440 QHL81619 507780 508655 + ROK_family_protein GUU87_02445 QHL81620 508652 509116 + YhcH/YjgK/YiaL_family_protein GUU87_02450 QHL81621 509176 510303 - DUF1016_family_protein GUU87_02455 QHL81622 510487 511905 - glutamate_synthase GUU87_02460 QHL85357 511918 516378 - glutamate_synthase_large_subunit gltB QHL81623 517053 517982 + TIGR01212_family_radical_SAM_protein GUU87_02470 QHL81624 518078 520414 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHL81625 520644 521297 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHL81626 521294 522022 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHL81627 522019 522651 - PhoP_regulatory_network_protein_YrbL yrbL QHL81628 522864 523136 - PTS_phosphocarrier_protein_NPr npr QHL81629 523133 523987 - RNase_adapter_RapZ rapZ QHL81630 524033 524524 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHL81631 524642 524929 - ribosome_hibernation_promoting_factor GUU87_02510 QHL81632 524952 526385 - RNA_polymerase_factor_sigma-54 rpoN QHL81633 526433 527158 - LPS_export_ABC_transporter_ATP-binding_protein lptB QHL81634 527165 527722 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHL81635 527691 528266 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHL81636 528263 528829 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHL81637 528850 529836 - arabinose-5-phosphate_isomerase_KdsD kdsD QHL81638 529850 530827 - calcium/sodium_antiporter GUU87_02545 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHL81621 91 698 107.449856734 0.0 PJR32595.1 QHL81620 98 311 100.0 7e-106 PJR32596.1 QHL81619 97 510 100.0 6e-180 >> 486. CP047665_0 Source: Escherichia coli strain LD26-1 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: QHJ61651 2606044 2607030 + arabinose-5-phosphate_isomerase_KdsD kdsD QHJ61652 2607051 2607617 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHJ61653 2607614 2608189 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHJ61654 2608158 2608715 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHJ61655 2608722 2609447 + LPS_export_ABC_transporter_ATP-binding_protein lptB QHJ61656 2609495 2610928 + RNA_polymerase_factor_sigma-54 rpoN QHJ61657 2610951 2611238 + ribosome_hibernation_promoting_factor GUU86_12585 QHJ61658 2611356 2611847 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHJ61659 2611893 2612747 + RNase_adapter_RapZ rapZ QHJ61660 2612744 2613016 + PTS_phosphocarrier_protein_NPr npr QHJ61661 2613229 2613861 + PhoP_regulatory_network_protein_YrbL yrbL QHJ61662 2613858 2614586 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHJ61663 2614583 2615236 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHJ61664 2615466 2617802 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHJ61665 2617898 2618827 - TIGR01212_family_radical_SAM_protein GUU86_12625 QHJ63662 2619502 2623962 + glutamate_synthase_large_subunit gltB QHJ61666 2623975 2625393 + glutamate_synthase GUU86_12635 QHJ61667 2625577 2626704 + DUF1016_family_protein GUU86_12640 QHJ61668 2626764 2627228 - YhcH/YjgK/YiaL_family_protein GUU86_12645 QHJ61669 2627225 2628100 - ROK_family_protein GUU86_12650 QHJ61670 2628097 2628786 - putative_N-acetylmannosamine-6-phosphate 2-epimerase GUU86_12655 QHJ61671 2628834 2630324 - sialic_acid_transporter_NanT nanT QHJ61672 2630433 2631326 - N-acetylneuraminate_lyase nanA QHJ61673 2631448 2632239 - transcriptional_regulator_NanR nanR QHJ61674 2632619 2633986 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHJ61675 2634029 2634526 - ClpXP_protease_specificity-enhancing_factor sspB QHJ61676 2634532 2635170 - stringent_starvation_protein_A sspA QHJ61677 2635565 2635957 - 30S_ribosomal_protein_S9 rpsI QHJ61678 2635973 2636401 - 50S_ribosomal_protein_L13 rplM QHJ61679 2636620 2637747 - cell_division_protein_ZapE zapE QHJ61680 2637941 2638339 + DUF1043_family_protein GUU86_12705 QHJ61681 2638493 2639860 + serine_endoprotease_DegQ degQ QHJ61682 2639950 2641017 + outer_membrane-stress_sensor_serine endopeptidase DegS degS QHJ61683 2641079 2642017 - malate_dehydrogenase mdh QHJ61684 2642452 2642922 + transcriptional_regulator_ArgR argR QHJ61685 2643287 2643550 + peroxide/acid_stress_response_protein_YhcN yhcN QHJ61686 2643606 2643878 - hypothetical_protein GUU86_12735 QHJ61687 2643970 2645937 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHJ61688 2645943 2646875 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHJ61689 2646883 2647086 - DUF1656_domain-containing_protein GUU86_12750 QHJ61690 2647269 2648198 + HTH-type_transcriptional_activator_AaeR aaeR Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHJ61667 91 698 107.449856734 0.0 PJR32595.1 QHJ61668 98 311 100.0 7e-106 PJR32596.1 QHJ61669 97 510 100.0 6e-180 >> 487. CP044314_0 Source: Escherichia coli strain RM9245 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: QEX68228 1336832 1337818 + arabinose-5-phosphate_isomerase_KdsD kdsD QEX68229 1337839 1338405 + 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QEX68230 1338402 1338977 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC QEX68231 1338946 1339503 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QEX68232 1339510 1340235 + LPS_export_ABC_transporter_ATP-binding_protein lptB QEX68233 1340283 1341716 + RNA_polymerase_factor_sigma-54 rpoN QEX68234 1341739 1342026 + ribosome_hibernation_promoting_factor F7D03_06605 QEX68235 1342144 1342635 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QEX68236 1342681 1343535 + RNase_adapter_RapZ rapZ QEX68237 1343532 1343804 + PTS_phosphocarrier_protein_NPr npr QEX68238 1344017 1344649 + PhoP_regulatory_network_protein_YrbL yrbL QEX68239 1344646 1345374 - monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QEX68240 1345371 1346024 - isoprenoid_biosynthesis_glyoxalase_ElbB elbB QEX68241 1346254 1348590 - aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QEX68242 1348641 1349615 - TIGR01212_family_radical_SAM_protein F7D03_06645 QEX71690 1350290 1354750 + glutamate_synthase_large_subunit gltB QEX68243 1354763 1356181 + glutamate_synthase F7D03_06655 QEX68244 1356365 1357492 + DUF1016_domain-containing_protein F7D03_06660 QEX68245 1357552 1358016 - DUF386_domain-containing_protein F7D03_06665 QEX68246 1358013 1358888 - N-acetylmannosamine_kinase F7D03_06670 QEX68247 1358885 1359574 - N-acetylmannosamine-6-phosphate_2-epimerase F7D03_06675 QEX68248 1359622 1361112 - sialic_acid_transporter_NanT nanT QEX68249 1361221 1362114 - N-acetylneuraminate_lyase nanA QEX68250 1362236 1363027 - transcriptional_regulator_NanR nanR QEX68251 1363407 1364774 + anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QEX68252 1364817 1365314 - ClpXP_protease_specificity-enhancing_factor sspB QEX68253 1365320 1365958 - stringent_starvation_protein_A sspA QEX68254 1366214 1366435 + hypothetical_protein F7D03_06710 QEX68255 1366353 1366745 - 30S_ribosomal_protein_S9 rpsI QEX68256 1366761 1367189 - 50S_ribosomal_protein_L13 rplM QEX68257 1367408 1368535 - cell_division_protein_ZapE F7D03_06725 QEX68258 1368729 1369127 + DUF1043_family_protein F7D03_06730 QEX68259 1369281 1370648 + serine_endoprotease_DegQ degQ QEX68260 1370738 1371805 + outer_membrane-stress_sensor_serine endopeptidase DegS degS QEX68261 1371867 1372805 - malate_dehydrogenase mdh QEX68262 1373240 1373710 + transcriptional_regulator_ArgR argR QEX68263 1374075 1374338 + peroxide/acid_stress_response_protein_YhcN yhcN QEX68264 1374394 1374666 - hypothetical_protein F7D03_06760 QEX68265 1374758 1376725 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QEX68266 1376731 1377663 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QEX68267 1377671 1377874 - DUF1656_domain-containing_protein F7D03_06775 QEX68268 1378057 1378986 + HTH-type_transcriptional_activator_AaeR aaeR Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QEX68244 91 698 107.449856734 0.0 PJR32595.1 QEX68245 98 311 100.0 7e-106 PJR32596.1 QEX68246 97 510 100.0 6e-180 >> 488. CP041435_0 Source: Escherichia coli strain STEC309 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: QHR25045 497342 497545 + DUF1656_domain-containing_protein FNE81_02405 QHR25046 497553 498485 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QHR25047 498491 500458 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QHR25048 500550 500822 + hypothetical_protein FNE81_02420 QHR25049 500878 501141 - peroxide/acid_stress_response_protein_YhcN yhcN QHR25050 501506 501976 - transcriptional_regulator_ArgR argR QHR25051 502411 503349 + malate_dehydrogenase mdh QHR25052 503411 504478 - outer_membrane-stress_sensor_serine endopeptidase DegS degS QHR25053 504568 505935 - serine_endoprotease_DegQ degQ QHR25054 506089 506487 - DUF1043_family_protein FNE81_02450 QHR25055 506681 507808 + cell_division_protein_ZapE FNE81_02455 QHR25056 508027 508455 + 50S_ribosomal_protein_L13 rplM QHR25057 508471 508863 + 30S_ribosomal_protein_S9 rpsI QHR25058 508781 509002 - hypothetical_protein FNE81_02470 QHR25059 509258 509896 + stringent_starvation_protein_A sspA QHR25060 509902 510399 + ClpXP_protease_specificity-enhancing_factor sspB QHR25061 510442 511809 - anaerobic_C4-dicarboxylate_transporter_DcuC dcuC QHR25062 512189 512980 + transcriptional_regulator_NanR nanR QHR25063 513102 513995 + N-acetylneuraminate_lyase nanA QHR25064 514104 515594 + sialic_acid_transporter_NanT nanT QHR25065 515642 516331 + N-acetylmannosamine-6-phosphate_2-epimerase FNE81_02505 QHR25066 516328 517203 + ROK_family_protein FNE81_02510 QHR25067 517200 517664 + DUF386_domain-containing_protein FNE81_02515 QHR25068 517724 518851 - DUF1016_domain-containing_protein FNE81_02520 QHR25069 519035 520453 - glutamate_synthase FNE81_02525 QHR29038 520466 524926 - glutamate_synthase_large_subunit gltB QHR25070 525601 526530 + TIGR01212_family_radical_SAM_protein FNE81_02535 QHR25071 526626 528962 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QHR25072 529192 529845 + isoprenoid_biosynthesis_glyoxalase_ElbB elbB QHR25073 529842 530570 + monofunctional_biosynthetic_peptidoglycan transglycosylase mtgA QHR25074 530567 531199 - PhoP_regulatory_network_protein_YrbL yrbL QHR25075 531412 531684 - PTS_phosphocarrier_protein_NPr npr QHR25076 531681 532535 - RNase_adapter_RapZ rapZ QHR25077 532581 533072 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QHR25078 533190 533477 - ribosome_hibernation_promoting_factor FNE81_02575 QHR25079 533500 534933 - RNA_polymerase_factor_sigma-54 rpoN QHR25080 534981 535706 - LPS_export_ABC_transporter_ATP-binding_protein lptB QHR25081 535713 536270 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QHR25082 536239 536814 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QHR25083 536811 537377 - 3-deoxy-manno-octulosonate-8-phosphatase_KdsC kdsC QHR25084 537398 538384 - arabinose-5-phosphate_isomerase_KdsD kdsD QHR25085 538398 539375 - calcium/sodium_antiporter FNE81_02610 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QHR25068 91 698 107.449856734 0.0 PJR32595.1 QHR25067 98 311 100.0 7e-106 PJR32596.1 QHR25066 97 510 100.0 6e-180 >> 489. CP031898_0 Source: Escherichia coli O113:H21 strain FWSEC0010 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: QCH49632 485126 485329 + protein_AaeX C8201_02525 QCH49633 485337 486269 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCH49634 486275 488242 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCH49635 488334 488606 + hypothetical_protein C8201_02540 QCH49636 488662 488925 - DUF1471_domain-containing_protein C8201_02545 QCH49637 489290 489760 - transcriptional_regulator_ArgR argR QCH49638 490195 491133 + malate_dehydrogenase C8201_02555 QCH49639 491195 492262 - serine_endoprotease_DegS degS QCH49640 492352 493719 - periplasmic_pH-dependent_serine_endoprotease DegQ C8201_02565 QCH49641 493873 494271 - DUF1043_family_protein C8201_02570 QCH49642 494465 495592 + cell_division_protein_ZapE zapE QCH49643 495811 496239 + 50S_ribosomal_protein_L13 C8201_02580 QCH49644 496255 496647 + 30S_ribosomal_protein_S9 C8201_02585 QCH49645 496565 496786 - hypothetical_protein C8201_02590 QCH53797 496760 496939 + hypothetical_protein C8201_02595 QCH53796 496891 497100 - hypothetical_protein C8201_02600 QCH49646 497042 497680 + stringent_starvation_protein_A C8201_02605 QCH49647 497686 498183 + stringent_starvation_protein_B C8201_02610 QCH49648 498226 499593 - C4-dicarboxylate_transporter_DcuC dcuC C8201_02620 499593 499703 + transposase no_locus_tag QCH49649 499973 500764 + transcriptional_regulator_NanR C8201_02625 QCH49650 500886 501779 + N-acetylneuraminate_lyase nanA QCH49651 501888 503378 + MFS_transporter C8201_02635 QCH49652 503426 504115 + N-acetylmannosamine-6-phosphate_2-epimerase C8201_02640 QCH49653 504112 504987 + ROK_family_protein C8201_02645 QCH49654 504984 505448 + YhcH/YjgK/YiaL_family_protein C8201_02650 QCH49655 505508 506635 - DUF1016_domain-containing_protein C8201_02655 QCH49656 506819 508237 - glutamate_synthase C8201_02660 QCH49657 508250 512710 - glutamate_synthase_large_subunit C8201_02665 C8201_02670 512633 512859 + hypothetical_protein no_locus_tag QCH49658 512757 512993 + hypothetical_protein C8201_02675 QCH53798 513385 514359 + TIGR01212_family_radical_SAM_protein C8201_02680 QCH49659 514410 516746 + aerobic_respiration_two-component_sensor histidine kinase ArcB arcB QCH49660 516976 517629 + glutamine_amidotransferase C8201_02690 QCH49661 517626 518354 + monofunctional_biosynthetic_peptidoglycan transglycosylase C8201_02695 QCH49662 518351 518983 - PhoP_regulatory_network_protein_YrbL yrbL QCH49663 519196 519468 - phosphocarrier_protein_NPr C8201_02705 QCH49664 519465 520319 - RNase_adaptor_protein_RapZ C8201_02710 QCH49665 520365 520856 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QCH49666 520974 521261 - ribosome_hibernation_promoting_factor C8201_02720 QCH49667 521284 522717 - RNA_polymerase_sigma-54_factor C8201_02725 QCH49668 522765 523490 - ABC_transporter_ATP-binding_protein C8201_02730 QCH49669 523497 524054 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QCH49670 524023 524598 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCH49671 524595 525161 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC C8201_02745 QCH49672 525182 526168 - arabinose_5-phosphate_isomerase_KdsD C8201_02750 QCH49673 526182 527159 - calcium/sodium_antiporter C8201_02755 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCH49655 91 698 107.449856734 0.0 PJR32595.1 QCH49654 98 311 100.0 7e-106 PJR32596.1 QCH49653 97 510 100.0 6e-180 >> 490. CP031892_0 Source: Escherichia coli O113:H21 strain FWSEC0011 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: QCH44460 484900 485103 + protein_AaeX C8202_02525 QCH44461 485111 486043 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA QCH44462 486049 488016 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB QCH44463 488108 488380 + hypothetical_protein C8202_02540 QCH44464 488436 488699 - DUF1471_domain-containing_protein C8202_02545 QCH44465 489064 489534 - transcriptional_regulator_ArgR argR QCH44466 489969 490907 + malate_dehydrogenase C8202_02555 QCH44467 490969 492036 - serine_endoprotease_DegS degS QCH44468 492126 493493 - periplasmic_pH-dependent_serine_endoprotease DegQ C8202_02565 QCH44469 493647 494045 - DUF1043_family_protein C8202_02570 QCH44470 494239 495366 + cell_division_protein_ZapE zapE QCH44471 495585 496013 + 50S_ribosomal_protein_L13 C8202_02580 QCH44472 496029 496421 + 30S_ribosomal_protein_S9 C8202_02585 QCH44473 496339 496560 - hypothetical_protein C8202_02590 QCH48705 496534 496713 + hypothetical_protein C8202_02595 QCH48704 496665 496874 - hypothetical_protein C8202_02600 QCH44474 496816 497454 + stringent_starvation_protein_A C8202_02605 QCH44475 497460 497957 + stringent_starvation_protein_B C8202_02610 QCH44476 498000 499367 - C4-dicarboxylate_transporter_DcuC dcuC C8202_02620 499367 499477 + transposase no_locus_tag QCH44477 499747 500538 + transcriptional_regulator_NanR C8202_02625 QCH44478 500660 501553 + N-acetylneuraminate_lyase nanA QCH44479 501662 503152 + MFS_transporter C8202_02635 QCH44480 503200 503889 + N-acetylmannosamine-6-phosphate_2-epimerase C8202_02640 QCH44481 503886 504761 + ROK_family_protein C8202_02645 QCH44482 504758 505222 + YhcH/YjgK/YiaL_family_protein C8202_02650 QCH44483 505282 506409 - DUF1016_domain-containing_protein C8202_02655 QCH44484 506593 508011 - glutamate_synthase C8202_02660 QCH44485 508024 512484 - glutamate_synthase_large_subunit C8202_02665 C8202_02670 512407 512633 + hypothetical_protein no_locus_tag QCH44486 512531 512767 + hypothetical_protein C8202_02675 QCH48706 513159 514088 + TIGR01212_family_radical_SAM_protein C8202_02680 QCH44487 514184 516520 + hybrid_sensor_histidine_kinase/response regulator C8202_02685 QCH44488 516750 517403 + glutamine_amidotransferase C8202_02690 QCH44489 517400 518128 + monofunctional_biosynthetic_peptidoglycan transglycosylase C8202_02695 QCH44490 518125 518757 - PhoP_regulatory_network_protein_YrbL yrbL QCH44491 518970 519242 - phosphocarrier_protein_NPr C8202_02705 QCH44492 519239 520093 - RNase_adaptor_protein_RapZ C8202_02710 QCH44493 520139 520630 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN ptsN QCH44494 520748 521035 - ribosome_hibernation_promoting_factor C8202_02720 QCH44495 521058 522491 - RNA_polymerase_sigma-54_factor C8202_02725 QCH44496 522539 523264 - ABC_transporter_ATP-binding_protein C8202_02730 QCH44497 523271 523828 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA lptA QCH44498 523797 524372 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC QCH44499 524369 524935 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC C8202_02745 QCH44500 524956 525942 - arabinose_5-phosphate_isomerase_KdsD C8202_02750 QCH44501 525956 526933 - calcium/sodium_antiporter C8202_02755 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 QCH44483 91 698 107.449856734 0.0 PJR32595.1 QCH44482 98 311 100.0 7e-106 PJR32596.1 QCH44481 97 510 100.0 6e-180 >> 491. CP024155_0 Source: Escherichia coli strain 14EC047 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: AUJ89448 519869 520072 + protein_AaeX CR540_02735 AUJ89449 520080 521012 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA CR540_02740 AUJ89450 521018 522985 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB CR540_02745 AUJ89451 523077 523331 + hypothetical_protein CR540_02750 CR540_02755 523360 524057 + IS1_family_transposase no_locus_tag AUJ89452 524411 524881 - arginine_repressor CR540_02760 AUJ89453 525316 526254 + malate_dehydrogenase CR540_02765 AUJ89454 526316 527383 - serine_endoprotease_DegS CR540_02770 AUJ89455 527473 528840 - serine_endoprotease_DegQ CR540_02775 AUJ89456 528994 529392 - hypothetical_protein CR540_02780 AUJ89457 529586 530713 + cell_division_protein_ZapE CR540_02785 AUJ89458 530932 531360 + 50S_ribosomal_protein_L13 CR540_02790 AUJ89459 531376 531768 + 30S_ribosomal_protein_S9 CR540_02795 AUJ89460 531686 531907 - hypothetical_protein CR540_02800 AUJ93582 531881 532060 + hypothetical_protein CR540_02805 AUJ93581 532012 532221 - hypothetical_protein CR540_02810 AUJ89461 532163 532801 + stringent_starvation_protein_A CR540_02815 AUJ89462 532807 533304 + stringent_starvation_protein_B CR540_02820 AUJ89463 533347 534714 - C4-dicarboxylate_transporter CR540_02825 CR540_02830 534714 534824 + transposase no_locus_tag AUJ89464 535094 535885 + transcriptional_regulator_NanR CR540_02835 AUJ89465 536007 536900 + N-acetylneuraminate_lyase nanA AUJ89466 537009 538499 + MFS_transporter CR540_02845 AUJ89467 538547 539236 + N-acetylmannosamine-6-phosphate_2-epimerase CR540_02850 AUJ89468 539233 540108 + N-acetylmannosamine_kinase CR540_02855 AUJ89469 540105 540569 + YhcH/YjgK/YiaL_family_protein CR540_02860 AUJ89470 540629 541756 - DUF1016_domain-containing_protein CR540_02865 AUJ89471 541940 542656 - DUF1120_domain-containing_protein CR540_02870 CR540_02875 542653 543197 - hypothetical_protein no_locus_tag AUJ89472 543194 545575 - fimbrial_protein CR540_02880 AUJ89473 545596 546270 - fimbrial_chaperone_protein CR540_02885 CR540_02890 546412 547109 - IS1_family_transposase no_locus_tag CR540_02895 547066 547164 - glycosyl_transferase no_locus_tag AUJ89474 547218 547982 - DUF1120_domain-containing_protein CR540_02900 AUJ89475 548103 548387 - hypothetical_protein CR540_02905 AUJ89476 548542 549960 - glutamate_synthase CR540_02910 AUJ89477 549973 554433 - glutamate_synthase_large_subunit CR540_02915 CR540_02920 554356 554582 + hypothetical_protein no_locus_tag AUJ89478 554480 554716 + hypothetical_protein CR540_02925 AUJ93583 555108 556037 + TIGR01212_family_radical_SAM_protein CR540_02930 AUJ89479 556133 558469 + hybrid_sensor_histidine_kinase/response regulator CR540_02935 AUJ89480 558699 559352 + isoprenoid_biosynthesis_protein_ElbB CR540_02940 AUJ89481 559349 560077 + monofunctional_biosynthetic_peptidoglycan transglycosylase CR540_02945 AUJ89482 560074 560706 - protein_YrbL CR540_02950 AUJ89483 560919 561191 - phosphocarrier_protein_NPr CR540_02955 AUJ89484 561188 562042 - RNase_adaptor_protein_RapZ CR540_02960 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AUJ89470 91 698 107.449856734 0.0 PJR32595.1 AUJ89469 98 311 100.0 7e-106 PJR32596.1 AUJ89468 97 510 100.0 6e-180 >> 492. CP019271_0 Source: Escherichia coli strain 13P460A chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: AUZ08631 2330656 2330859 + protein_AaeX BWI88_11790 AUZ08632 2330867 2331799 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA BWI88_11795 AUZ08633 2331805 2333772 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BWI88_11800 AUZ08634 2333864 2334136 + hypothetical_protein BWI88_11805 AUZ08635 2334192 2334455 - hypothetical_protein BWI88_11810 AUZ08636 2334820 2335290 - arginine_repressor BWI88_11815 AUZ08637 2335725 2336663 + malate_dehydrogenase BWI88_11820 AUZ08638 2336725 2337792 - outer_membrane-stress_sensor_serine endopeptidase DegS BWI88_11825 AUZ08639 2337882 2339249 - periplasmic_pH-dependent_serine_endoprotease DegQ BWI88_11830 AUZ08640 2339403 2339801 - hypothetical_protein BWI88_11835 AUZ08641 2339995 2341122 + cell_division_protein_ZapE BWI88_11840 AUZ08642 2341341 2341769 + 50S_ribosomal_protein_L13 BWI88_11845 AUZ08643 2341785 2342177 + 30S_ribosomal_protein_S9 BWI88_11850 AUZ08644 2342095 2342316 - hypothetical_protein BWI88_11855 AUZ10934 2342290 2342469 + hypothetical_protein BWI88_11860 AUZ10933 2342421 2342630 - hypothetical_protein BWI88_11865 AUZ08645 2342572 2343210 + stringent_starvation_protein_A BWI88_11870 AUZ08646 2343216 2343713 + stringent_starvation_protein_B BWI88_11875 AUZ08647 2343756 2345123 - C4-dicarboxylate_transporter BWI88_11880 BWI88_11885 2345123 2345233 + transposase no_locus_tag AUZ08648 2345503 2346294 + transcriptional_regulator_NanR BWI88_11890 AUZ08649 2346416 2347309 + N-acetylneuraminate_lyase nanA AUZ08650 2347418 2348908 + MFS_transporter BWI88_11900 AUZ08651 2348956 2349645 + N-acetylmannosamine-6-phosphate_2-epimerase BWI88_11905 AUZ08652 2349642 2350517 + N-acetylmannosamine_kinase BWI88_11910 AUZ08653 2350514 2350978 + YhcH/YjgK/YiaL_family_protein BWI88_11915 AUZ08654 2351038 2352165 - DUF1016_domain-containing_protein BWI88_11920 AUZ08655 2352349 2353767 - glutamate_synthase BWI88_11925 AUZ08656 2353780 2358240 - glutamate_synthase_large_subunit BWI88_11930 BWI88_11935 2358163 2358389 + hypothetical_protein no_locus_tag AUZ08657 2358287 2358523 + hypothetical_protein BWI88_11940 AUZ10935 2358915 2359844 + TIGR01212_family_radical_SAM_protein BWI88_11945 AUZ08658 2359940 2362276 + hybrid_sensor_histidine_kinase/response regulator BWI88_11950 AUZ08659 2362506 2363159 + glutamine_amidotransferase BWI88_11955 AUZ08660 2363156 2363884 + monofunctional_biosynthetic_peptidoglycan transglycosylase BWI88_11960 AUZ08661 2363881 2364513 - hypothetical_protein BWI88_11965 AUZ08662 2364726 2364998 - phosphocarrier_protein_NPr BWI88_11970 AUZ08663 2364995 2365849 - RNase_adaptor_protein_RapZ BWI88_11975 AUZ08664 2365895 2366386 - PTS_IIA-like_nitrogen_regulatory_protein_PtsN BWI88_11980 AUZ08665 2366504 2366791 - ribosome_hibernation_promoting_factor raiA AUZ08666 2366814 2368247 - RNA_polymerase_sigma-54_factor BWI88_11990 AUZ08667 2368295 2369020 - ABC_transporter_ATP-binding_protein lptB AUZ08668 2369027 2369584 - lipopolysaccharide_ABC_transporter substrate-binding protein LptA BWI88_12000 AUZ08669 2369553 2370128 - LPS_export_ABC_transporter_periplasmic_protein LptC lptC AUZ08670 2370125 2370691 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC BWI88_12010 AUZ08671 2370712 2371698 - arabinose_5-phosphate_isomerase_KdsD BWI88_12015 AUZ08672 2371712 2372689 - calcium/sodium_antiporter BWI88_12020 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AUZ08654 91 698 107.449856734 0.0 PJR32595.1 AUZ08653 98 311 100.0 7e-106 PJR32596.1 AUZ08652 97 510 100.0 6e-180 >> 493. CP019267_0 Source: Escherichia coli strain 13C1079T chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: AUY94331 34009 34995 + arabinose_5-phosphate_isomerase_KdsD BWI87_00190 AUY94332 35016 35582 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC BWI87_00195 AUY94333 35579 36154 + LPS_export_ABC_transporter_periplasmic_protein LptC lptC AUY94334 36123 36680 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA BWI87_00205 AUY94335 36687 37412 + ABC_transporter_ATP-binding_protein lptB AUY94336 37460 38893 + RNA_polymerase_sigma-54_factor BWI87_00215 AUY94337 38916 39203 + ribosome_hibernation_promoting_factor raiA AUY94338 39321 39812 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN BWI87_00225 AUY94339 39858 40712 + RNase_adaptor_protein_RapZ BWI87_00230 AUY94340 40709 40981 + phosphocarrier_protein_NPr BWI87_00235 AUY94341 41194 41826 + hypothetical_protein BWI87_00240 AUY94342 41823 42551 - monofunctional_biosynthetic_peptidoglycan transglycosylase BWI87_00245 AUY94343 42548 43201 - glutamine_amidotransferase BWI87_00250 AUY94344 43431 45767 - hybrid_sensor_histidine_kinase/response regulator BWI87_00255 AUY98649 45863 46792 - TIGR01212_family_radical_SAM_protein BWI87_00260 AUY94345 47184 47420 - hypothetical_protein BWI87_00265 BWI87_00270 47318 47544 - hypothetical_protein no_locus_tag AUY94346 47467 51927 + glutamate_synthase_large_subunit BWI87_00275 AUY94347 51940 53358 + glutamate_synthase BWI87_00280 AUY94348 53542 54669 + DUF1016_domain-containing_protein BWI87_00285 AUY94349 54729 55193 - YhcH/YjgK/YiaL_family_protein BWI87_00290 AUY94350 55190 56065 - N-acetylmannosamine_kinase BWI87_00295 AUY94351 56062 56751 - N-acetylmannosamine-6-phosphate_2-epimerase BWI87_00300 AUY94352 56799 58289 - MFS_transporter BWI87_00305 AUY94353 58398 59291 - N-acetylneuraminate_lyase nanA AUY94354 59413 60204 - transcriptional_regulator_NanR BWI87_00315 BWI87_00320 60474 60584 - transposase no_locus_tag AUY94355 60584 61951 + C4-dicarboxylate_transporter BWI87_00325 AUY94356 61994 62491 - stringent_starvation_protein_B BWI87_00330 AUY94357 62497 63135 - stringent_starvation_protein_A BWI87_00335 AUY94358 63077 63286 + hypothetical_protein BWI87_00340 AUY98650 63238 63417 - hypothetical_protein BWI87_00345 AUY94359 63391 63612 + hypothetical_protein BWI87_00350 AUY94360 63530 63922 - 30S_ribosomal_protein_S9 BWI87_00355 AUY94361 63938 64366 - 50S_ribosomal_protein_L13 BWI87_00360 AUY94362 64585 65712 - cell_division_protein_ZapE BWI87_00365 AUY94363 65906 66304 + hypothetical_protein BWI87_00370 AUY94364 66458 67825 + periplasmic_pH-dependent_serine_endoprotease DegQ BWI87_00375 AUY94365 67915 68982 + outer_membrane-stress_sensor_serine endopeptidase DegS BWI87_00380 AUY94366 69044 69982 - malate_dehydrogenase BWI87_00385 AUY94367 70417 70887 + arginine_repressor BWI87_00390 AUY94368 71252 71515 + hypothetical_protein BWI87_00395 AUY94369 71571 71843 - hypothetical_protein BWI87_00400 AUY94370 71935 73902 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BWI87_00405 AUY94371 73908 74840 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA BWI87_00410 AUY94372 74848 75051 - protein_AaeX BWI87_00415 AUY94373 75234 76163 + HTH-type_transcriptional_activator_AaeR BWI87_00420 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 AUY94348 91 698 107.449856734 0.0 PJR32595.1 AUY94349 98 311 100.0 7e-106 PJR32596.1 AUY94350 97 510 100.0 6e-180 >> 494. CP015995_0 Source: Escherichia coli strain S51, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: ANJ37623 503973 504176 + transporter A9K64_02500 ANJ33495 504184 505116 + efflux_transporter_periplasmic_adaptor_subunit A9K64_02505 ANJ33496 505122 507089 + p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB A9K64_02510 ANJ33497 507181 507453 + hypothetical_protein A9K64_02515 ANJ33498 507509 507772 - hypothetical_protein A9K64_02520 ANJ33499 508137 508607 - arginine_repressor A9K64_02525 ANJ33500 509042 509980 + malate_dehydrogenase A9K64_02530 ANJ33501 510042 511109 - outer_membrane-stress_sensor_serine endopeptidase DegS A9K64_02535 ANJ33502 511199 512566 - serine_endoprotease_DegQ A9K64_02540 ANJ33503 512720 513118 - hypothetical_protein A9K64_02545 ANJ33504 513312 514439 + hypothetical_protein A9K64_02550 ANJ33505 514658 515086 + 50S_ribosomal_protein_L13 A9K64_02555 ANJ33506 515102 515494 + 30S_ribosomal_protein_S9 A9K64_02560 ANJ33507 515889 516527 + stringent_starvation_protein_A sspA ANJ33508 516533 517030 + ClpXP_protease_specificity-enhancing_factor A9K64_02570 ANJ33509 517073 518440 - C4-dicarboxylate_transporter A9K64_02575 ANJ33510 518820 519611 + transcriptional_regulator_NanR A9K64_02580 ANJ33511 519733 520626 + N-acetylneuraminate_lyase A9K64_02585 ANJ33512 520735 522225 + sialic_acid_transporter A9K64_02590 ANJ33513 522273 522962 + N-acetylmannosamine-6-phosphate_2-epimerase A9K64_02595 ANJ33514 522959 523834 + N-acetylmannosamine_kinase A9K64_02600 ANJ33515 523831 524295 + hypothetical_protein A9K64_02605 ANJ33516 524355 525482 - hypothetical_protein A9K64_02610 ANJ33517 525666 527084 - glutamate_synthase A9K64_02615 ANJ37624 527097 531557 - glutamate_synthase_large_subunit A9K64_02620 ANJ37625 532232 533161 + TIGR01212_family_radical_SAM_protein A9K64_02625 ANJ33518 533257 535593 + aerobic_respiration_two-component_sensor histidine kinase ArcB A9K64_02630 ANJ33519 535823 536476 + isoprenoid_biosynthesis_protein_ElbB A9K64_02635 ANJ33520 536473 537201 + monofunctional_biosynthetic_peptidoglycan transglycosylase A9K64_02640 ANJ33521 537198 537830 - hypothetical_protein A9K64_02645 ANJ33522 538043 538315 - phosphohistidinoprotein-hexose phosphotransferase A9K64_02650 ANJ33523 538312 539166 - RNase_adaptor_protein_RapZ A9K64_02655 ANJ33524 539212 539703 - PTS_IIA-like_nitrogen-regulatory_protein_PtsN A9K64_02660 ANJ33525 539821 540108 - ribosomal_subunit_interface_protein A9K64_02665 ANJ33526 540131 541564 - RNA_polymerase_factor_sigma-54 A9K64_02670 ANJ33527 541612 542337 - LPS_export_ABC_transporter_ATP-binding_protein A9K64_02675 ANJ33528 542344 542901 - lipopolysaccharide_transport_periplasmic_protein LptA A9K64_02680 ANJ33529 542870 543445 - LPS_export_ABC_transporter_periplasmic_protein LptC A9K64_02685 ANJ33530 543442 544008 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase A9K64_02690 ANJ33531 544029 545015 - D-arabinose_5-phosphate_isomerase A9K64_02695 ANJ33532 545029 546006 - calcium/sodium_antiporter A9K64_02700 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ANJ33516 91 698 107.449856734 0.0 PJR32595.1 ANJ33515 98 311 100.0 7e-106 PJR32596.1 ANJ33514 97 510 100.0 6e-180 >> 495. CP012380_0 Source: Escherichia coli strain WAT, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: ASO94659 3574747 3575733 + D-arabinose_5-phosphate_isomerase AKO64_3535 ASO94660 3575754 3576320 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase AKO64_3536 ASO94661 3576317 3576892 + hypothetical_protein AKO64_3537 ASO94662 3576861 3577418 + lipopolysaccharide_transport_periplasmic_protein LptA AKO64_3538 ASO94663 3577425 3578150 + putative_ABC_transporter_ATP-binding_protein YhbG AKO64_3539 ASO94664 3578198 3579631 + RNA_polymerase_factor_sigma-54 AKO64_3540 ASO94665 3579654 3579941 + putative_sigma_modulation_protein AKO64_3541 ASO94666 3580059 3580550 + PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN AKO64_3542 ASO94667 3580596 3581450 + hypothetical_protein AKO64_3543 ASO94668 3581447 3581719 + phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system AKO64_3544 ASO94669 3581716 3581829 - hypothetical_protein AKO64_3545 ASO94670 3581932 3582564 + hypothetical_protein AKO64_3546 ASO94671 3582561 3583289 - monofunctional_biosynthetic_peptidoglycan transglycosylase AKO64_3547 ASO94672 3583286 3583939 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain AKO64_3548 ASO94673 3584169 3586505 - aerobic_respiration_control_sensor_protein_ArcB AKO64_3549 ASO94674 3586601 3587530 - putative_Fe-S_oxidoreductase AKO64_3550 ASO94675 3587795 3587932 - hypothetical_protein AKO64_3551 ASO94676 3588112 3592665 + glutamate_synthase_subunit_alpha AKO64_3552 ASO94677 3592678 3594096 + glutamate_synthase_subunit_beta AKO64_3553 ASO94678 3594280 3595407 + hypothetical_protein AKO64_3554 ASO94679 3595467 3595931 - hypothetical_protein AKO64_3555 ASO94680 3595928 3596803 - N-acetylmannosamine_kinase AKO64_3556 ASO94681 3596800 3597489 - N-acetylmannosamine-6-phosphate_2-epimerase AKO64_3557 ASO94682 3597537 3599027 - putative_sialic_acid_transporter AKO64_3558 ASO94683 3599136 3600029 - N-acetylneuraminate_lyase AKO64_3559 ASO94684 3600151 3600933 - transcriptional_regulator_NanR AKO64_3560 ASO94685 3601321 3602688 + putative_cryptic_C4-dicarboxylate_transporter DcuD AKO64_3561 ASO94686 3602731 3603228 - ClpXP_protease_specificity-enhancing_factor AKO64_3562 ASO94687 3603234 3603872 - stringent_starvation_protein_A AKO64_3563 ASO94688 3604267 3604659 - 30S_ribosomal_protein_S9 AKO64_3564 ASO94689 3604675 3605103 - 50S_ribosomal_protein_L13 AKO64_3565 ASO94690 3605322 3606449 - hypothetical_protein AKO64_3566 ASO94691 3606643 3607041 + cytochrome_d_ubiquinol_oxidase_subunit_III AKO64_3567 ASO94692 3607195 3608562 + serine_endoprotease AKO64_3568 ASO94693 3608652 3609719 + serine_endoprotease AKO64_3569 ASO94694 3609781 3610719 - malate_dehydrogenase AKO64_3570 ASO94695 3611154 3611624 + arginine_repressor AKO64_3571 ASO94696 3611989 3612252 + hypothetical_protein AKO64_3572 ASO94697 3612308 3612580 - hypothetical_protein AKO64_3573 ASO94698 3612672 3614639 - p-hydroxybenzoic_acid_efflux_subunit_AaeB AKO64_3574 ASO94699 3614645 3615577 - p-hydroxybenzoic_acid_efflux_subunit_AaeA AKO64_3575 ASO94700 3615585 3615857 - hypothetical_protein AKO64_3576 ASO94701 3615989 3616900 + DNA-binding_transcriptional_regulator AKO64_3577 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ASO94678 91 698 107.449856734 0.0 PJR32595.1 ASO94679 98 311 100.0 7e-106 PJR32596.1 ASO94680 97 510 100.0 6e-180 >> 496. CP012376_0 Source: Escherichia coli strain GE3, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: ASO85112 3571629 3572615 + D-arabinose_5-phosphate_isomerase AKN41_3517 ASO85113 3572636 3573202 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase AKN41_3518 ASO85114 3573199 3573774 + hypothetical_protein AKN41_3519 ASO85115 3573743 3574300 + lipopolysaccharide_transport_periplasmic_protein LptA AKN41_3520 ASO85116 3574307 3575032 + putative_ABC_transporter_ATP-binding_protein YhbG AKN41_3521 ASO85117 3575080 3576513 + RNA_polymerase_factor_sigma-54 AKN41_3522 ASO85118 3576536 3576823 + putative_sigma_modulation_protein AKN41_3523 ASO85119 3576941 3577432 + PTS_system_transporter_subunit_IIA-like nitrogen-regulatory protein PtsN AKN41_3524 ASO85120 3577478 3578332 + hypothetical_protein AKN41_3525 ASO85121 3578329 3578601 + phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system AKN41_3526 ASO85122 3578598 3578711 - hypothetical_protein AKN41_3527 ASO85123 3578814 3579446 + hypothetical_protein AKN41_3528 ASO85124 3579443 3580171 - monofunctional_biosynthetic_peptidoglycan transglycosylase AKN41_3529 ASO85125 3580168 3580821 - isoprenoid_biosynthesis_protein_with amidotransferase-like domain AKN41_3530 ASO85126 3581051 3583387 - aerobic_respiration_control_sensor_protein_ArcB AKN41_3531 ASO85127 3583483 3584412 - putative_Fe-S_oxidoreductase AKN41_3532 ASO85128 3584677 3584814 - hypothetical_protein AKN41_3533 ASO85129 3584994 3589547 + glutamate_synthase_subunit_alpha AKN41_3534 ASO85130 3589560 3590978 + glutamate_synthase_subunit_beta AKN41_3535 ASO85131 3591162 3592289 + hypothetical_protein AKN41_3536 ASO85132 3592349 3592813 - hypothetical_protein AKN41_3537 ASO85133 3592810 3593685 - N-acetylmannosamine_kinase AKN41_3538 ASO85134 3593682 3594371 - N-acetylmannosamine-6-phosphate_2-epimerase AKN41_3539 ASO85135 3594419 3595909 - putative_sialic_acid_transporter AKN41_3540 ASO85136 3596018 3596911 - N-acetylneuraminate_lyase AKN41_3541 ASO85137 3597033 3597815 - transcriptional_regulator_NanR AKN41_3542 ASO85138 3598204 3599571 + putative_cryptic_C4-dicarboxylate_transporter DcuD AKN41_3543 ASO85139 3599614 3600111 - ClpXP_protease_specificity-enhancing_factor AKN41_3544 ASO85140 3600117 3600755 - stringent_starvation_protein_A AKN41_3545 ASO85141 3601150 3601542 - 30S_ribosomal_protein_S9 AKN41_3546 ASO85142 3601558 3601986 - 50S_ribosomal_protein_L13 AKN41_3547 ASO85143 3602205 3603332 - hypothetical_protein AKN41_3548 ASO85144 3603526 3603924 + cytochrome_d_ubiquinol_oxidase_subunit_III AKN41_3549 ASO85145 3604078 3605445 + serine_endoprotease AKN41_3550 ASO85146 3605535 3606602 + serine_endoprotease AKN41_3551 ASO85147 3606664 3607602 - malate_dehydrogenase AKN41_3552 ASO85148 3608037 3608507 + arginine_repressor AKN41_3553 ASO85149 3608872 3609135 + hypothetical_protein AKN41_3554 ASO85150 3609191 3609463 - hypothetical_protein AKN41_3555 ASO85151 3609555 3611522 - p-hydroxybenzoic_acid_efflux_subunit_AaeB AKN41_3556 ASO85152 3611528 3612460 - p-hydroxybenzoic_acid_efflux_subunit_AaeA AKN41_3557 ASO85153 3612468 3612740 - hypothetical_protein AKN41_3558 ASO85154 3612872 3613783 + DNA-binding_transcriptional_regulator AKN41_3559 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 ASO85131 91 698 107.449856734 0.0 PJR32595.1 ASO85132 98 311 100.0 7e-106 PJR32596.1 ASO85133 97 510 100.0 6e-180 >> 497. CP010117_0 Source: Escherichia coli strain C2, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1519 Table of genes, locations, strands and annotations of subject cluster: APJ64765 4073256 4073459 + transporter RG25_19960 APJ63927 4073467 4074399 + p-hydroxybenzoic_acid_efflux_subunit_AaeA RG25_19965 APJ63928 4074405 4076372 + p-hydroxybenzoic_acid_efflux_subunit_AaeB RG25_19970 APJ63929 4076464 4076736 + hypothetical_protein RG25_19975 APJ63930 4076792 4077055 - membrane_protein RG25_19980 APJ63931 4077420 4077890 - arginine_repressor RG25_19985 APJ63932 4078325 4079263 + malate_dehydrogenase RG25_19990 APJ63933 4079326 4080393 - serine_endoprotease RG25_19995 APJ63934 4080483 4081850 - serine_endoprotease_DegQ RG25_20000 APJ63935 4082004 4082402 - hypothetical_protein RG25_20005 APJ63936 4082596 4083723 + hypothetical_protein RG25_20010 APJ63937 4083942 4084370 + 50S_ribosomal_protein_L13 RG25_20015 APJ63938 4084386 4084778 + 30S_ribosomal_protein_S9 RG25_20020 APJ63939 4085173 4085811 + stringent_starvation_protein_A sspA APJ63940 4085817 4086314 + Clp_protease_ClpP RG25_20030 APJ63941 4086357 4087724 - C4-dicarboxylate_transporter RG25_20035 APJ63942 4088104 4088895 + transcriptional_regulator_NanR RG25_20040 APJ63943 4089017 4089910 + N-acetylneuraminate_lyase RG25_20045 APJ63944 4090019 4091509 + sialic_acid_transporter RG25_20050 APJ63945 4091557 4092246 + N-acetylmannosamine-6-phosphate_2-epimerase RG25_20055 APJ63946 4092243 4093118 + N-acetylmannosamine_kinase RG25_20060 APJ63947 4093115 4093579 + hypothetical_protein RG25_20065 APJ63948 4093639 4094766 - hypothetical_protein RG25_20070 APJ63949 4094950 4096368 - glutamate_synthase RG25_20075 APJ64766 4096381 4100841 - glutamate_synthase gltB APJ64767 4101516 4102445 + hypothetical_protein RG25_20085 APJ63950 4102541 4104877 + aerobic_respiration_control_sensor_protein_ArcB RG25_20090 APJ63951 4105107 4105760 + isoprenoid_biosynthesis_protein RG25_20095 APJ63952 4105757 4106485 + peptidoglycan_transglycosylase mtgA APJ63953 4106482 4107114 - hypothetical_protein RG25_20105 APJ63954 4107328 4107600 - phosphohistidinoprotein-hexose phosphotransferase RG25_20110 APJ63955 4107597 4108451 - glmZ(sRNA)-inactivating_NTPase RG25_20115 APJ63956 4108497 4108988 - PTS_system_nitrogen_regulatory_protein_IIA(Ntr) RG25_20120 APJ63957 4109106 4109393 - ribosome_hibernation_promoting_factor_HPF RG25_20125 APJ63958 4109416 4110849 - RNA_polymerase_factor_sigma-54 RG25_20130 APJ63959 4110897 4111622 - sugar_ABC_transporter_ATP-binding_protein RG25_20135 APJ63960 4111629 4112186 - lipopolysaccharide_transporter RG25_20140 APJ63961 4112155 4112730 - lipopolysaccharide_transporter RG25_20145 APJ63962 4112727 4113293 - 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase RG25_20150 APJ63963 4113314 4114300 - D-arabinose_5-phosphate_isomerase RG25_20155 APJ63964 4114314 4115291 - calcium/sodium:proton_antiporter RG25_20160 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32594.1 APJ63948 91 698 107.449856734 0.0 PJR32595.1 APJ63947 98 311 100.0 7e-106 PJR32596.1 APJ63946 97 510 100.0 6e-180 >> 498. CP029747_0 Source: Escherichia coli strain 2016C-3878 chromosome, complete genome. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1325 Table of genes, locations, strands and annotations of subject cluster: AWT03147 3882040 3882606 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC AWT03148 3882603 3883178 + LPS_export_ABC_transporter_periplasmic_protein LptC BEN53_19740 AWT03149 3883147 3883704 + lipopolysaccharide_ABC_transporter substrate-binding protein LptA BEN53_19745 AWT03150 3883711 3884436 + ABC_transporter_ATP-binding_protein BEN53_19750 AWT03151 3884484 3885917 + RNA_polymerase_sigma-54_factor BEN53_19755 AWT03152 3885940 3886227 + ribosome_hibernation_promoting_factor BEN53_19760 AWT03153 3886345 3886836 + PTS_IIA-like_nitrogen_regulatory_protein_PtsN BEN53_19765 AWT03154 3886882 3887736 + RNase_adaptor_protein_RapZ BEN53_19770 AWT03155 3887733 3888005 + phosphocarrier_protein_NPr BEN53_19775 AWT03156 3888218 3888850 + PhoP_regulatory_network_protein_YrbL yrbL AWT03157 3888847 3889575 - monofunctional_biosynthetic_peptidoglycan transglycosylase BEN53_19785 AWT03158 3889572 3890225 - glutamine_amidotransferase BEN53_19790 AWT03159 3890455 3892791 - hybrid_sensor_histidine_kinase/response regulator BEN53_19795 AWT04330 3892887 3893816 - TIGR01212_family_radical_SAM_protein BEN53_19800 AWT03160 3894207 3894443 - hypothetical_protein BEN53_19805 BEN53_19810 3894341 3894567 - hypothetical_protein no_locus_tag AWT03161 3894490 3898950 + glutamate_synthase_large_subunit BEN53_19815 AWT03162 3898963 3900381 + glutamate_synthase_small_subunit BEN53_19820 AWT03163 3900565 3901677 + DUF1016_domain-containing_protein BEN53_19825 AWT03164 3901737 3902201 - YhcH/YjgK/YiaL_family_protein BEN53_19830 AWT03165 3902198 3903073 - N-acetylmannosamine_kinase BEN53_19835 AWT03166 3903070 3903759 - N-acetylmannosamine-6-phosphate_2-epimerase BEN53_19840 AWT03167 3903807 3905297 - MFS_transporter BEN53_19845 AWT03168 3905406 3906299 - N-acetylneuraminate_lyase nanA AWT03169 3906421 3907212 - transcriptional_regulator_NanR nanR BEN53_19860 3907482 3907592 - transposase no_locus_tag AWT03170 3907592 3908959 + C4-dicarboxylate_transporter_DcuC BEN53_19865 AWT03171 3909003 3909500 - stringent_starvation_protein_B BEN53_19870 AWT03172 3909506 3910144 - stringent_starvation_protein_A BEN53_19875 AWT03173 3910086 3910295 + hypothetical_protein BEN53_19880 AWT03174 3910414 3911208 - DUF695_domain-containing_protein BEN53_19885 AWT03175 3911363 3911755 - 30S_ribosomal_protein_S9 BEN53_19890 AWT03176 3911771 3912199 - 50S_ribosomal_protein_L13 BEN53_19895 AWT03177 3912418 3913545 - cell_division_protein_ZapE BEN53_19900 AWT03178 3913739 3914137 + DUF1043_domain-containing_protein BEN53_19905 AWT03179 3914291 3915658 + periplasmic_pH-dependent_serine_endoprotease DegQ BEN53_19910 AWT03180 3915748 3916815 + outer_membrane-stress_sensor_serine endopeptidase DegS BEN53_19915 AWT03181 3916878 3917816 - malate_dehydrogenase BEN53_19920 AWT03182 3918251 3918721 + arginine_repressor BEN53_19925 AWT03183 3919087 3919350 + DUF1471_domain-containing_protein BEN53_19930 AWT03184 3919407 3919679 - hypothetical_protein BEN53_19935 AWT03185 3919771 3921738 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB BEN53_19940 AWT03186 3921744 3922676 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA BEN53_19945 AWT03187 3922684 3922887 - protein_AaeX BEN53_19950 AWT03188 3923070 3923999 + HTH-type_transcriptional_activator_AaeR BEN53_19955 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 AWT03164 98 311 100.0 5e-106 PJR32596.1 AWT03165 98 558 100.0 0.0 PJR32597.1 AWT03166 99 456 100.0 1e-160 >> 499. AP017620_0 Source: Escherichia coli DNA, complete genome, strain: MRY15-131. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1325 Table of genes, locations, strands and annotations of subject cluster: BAX22631 3553905 3554471 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC BAX22632 3554468 3555043 + lipopolysaccharide_export_system_protein_LptC lptC BAX22633 3555012 3555569 + lipopolysaccharide_export_system_protein_LptA precursor lptA BAX22634 3555576 3556301 + lipopolysaccharide_export_system_ATP-binding protein LptB lptB_1 BAX22635 3556349 3557782 + RNA_polymerase_sigma-54_factor rpoN BAX22636 3557805 3558092 + ribosome_hibernation_promoting_factor hpf BAX22637 3558210 3558701 + nitrogen_regulatory_protein ptsN BAX22638 3558747 3559601 + glmZ(sRNA)-inactivating_NTPase MRY15131_c32960 BAX22639 3559598 3559870 + phosphocarrier_protein_NPr ptsO BAX22640 3560083 3560715 + hypothetical_protein MRY15131_c32980 BAX22641 3560712 3561440 - penicillin-binding_protein_2D pbpG_2 BAX22642 3561437 3562090 - enhancing_lycopene_biosynthesis_protein_2 elbB BAX22643 3562320 3564656 - aerobic_respiration_control_sensor_protein_ArcB arcB BAX22644 3564752 3565681 - coproporphyrinogen_III_oxidase MRY15131_c33020 BAX22645 3566262 3570815 + glutamate_synthase_[NADPH]_large_chain precursor gltB BAX22646 3570828 3572246 + glutamate_synthase_[NADPH]_small_chain gltD_4 BAX22647 3572430 3573542 + hypothetical_protein MRY15131_c33050 BAX22648 3573602 3574066 - toxin-antitoxin_biofilm_protein_TabA tabA_2 BAX22649 3574063 3574938 - N-acetylmannosamine_kinase nanK_2 BAX22650 3574935 3575624 - putative_N-acetylmannosamine-6-phosphate 2-epimerase nanE_2 BAX22651 3575672 3577162 - putative_sialic_acid_transporter nanT BAX22652 3577271 3578164 - N-acetylneuraminate_lyase nanA BAX22653 3578286 3579077 - HTH-type_transcriptional_regulator_LutR lutR_2 BAX22654 3579457 3580824 + putative_cryptic_C4-dicarboxylate_transporter DcuD dcuD_2 BAX22655 3580868 3581365 - stringent_starvation_protein_B sspB BAX22656 3581371 3582009 - stringent_starvation_protein_A sspA BAX22657 3582279 3583073 - hypothetical_protein MRY15131_c33150 BAX22658 3583228 3583620 - 30S_ribosomal_protein_S9 rpsI BAX22659 3583636 3584064 - 50S_ribosomal_protein_L13 rplM BAX22660 3584283 3585410 - hypothetical_protein MRY15131_c33180 BAX22661 3585604 3586002 + inner_membrane_protein_YhcB yhcB BAX22662 3586156 3587523 + periplasmic_pH-dependent_serine_endoprotease DegQ precursor degQ BAX22663 3587613 3588680 + serine_endoprotease_DegS degS_1 BAX22664 3588743 3589681 - malate_dehydrogenase mdh_2 BAX22665 3590116 3590586 + arginine_repressor argR BAX22666 3590952 3591215 + multiple_stress_resistance_protein_BhsA precursor bhsA_5 BAX22667 3591272 3591544 - putative_barstar MRY15131_c33250 BAX22668 3591636 3593603 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB_2 BAX22669 3593609 3594541 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA_2 BAX22670 3594549 3594752 - efflux_system_membrane_protein MRY15131_c33280 BAX22671 3594935 3595864 + HTH-type_transcriptional_regulator_DmlR dmlR_7 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 BAX22648 98 311 100.0 5e-106 PJR32596.1 BAX22649 98 558 100.0 0.0 PJR32597.1 BAX22650 99 456 100.0 1e-160 >> 500. AP017617_0 Source: Escherichia coli DNA, complete genome, strain: MRY15-117. Number of proteins with BLAST hits to this cluster: 4 MultiGeneBlast score: 4.0 Cumulative Blast bit score: 1325 Table of genes, locations, strands and annotations of subject cluster: BAX17758 3626089 3626655 + 3-deoxy-D-manno-octulosonate_8-phosphate phosphatase KdsC kdsC BAX17759 3626652 3627227 + lipopolysaccharide_export_system_protein_LptC lptC BAX17760 3627196 3627753 + lipopolysaccharide_export_system_protein_LptA precursor lptA BAX17761 3627760 3628485 + lipopolysaccharide_export_system_ATP-binding protein LptB lptB_1 BAX17762 3628533 3629966 + RNA_polymerase_sigma-54_factor rpoN BAX17763 3629989 3630276 + ribosome_hibernation_promoting_factor hpf BAX17764 3630394 3630885 + nitrogen_regulatory_protein ptsN BAX17765 3630931 3631785 + glmZ(sRNA)-inactivating_NTPase MRY15117_c33550 BAX17766 3631782 3632054 + phosphocarrier_protein_NPr ptsO BAX17767 3632267 3632899 + hypothetical_protein MRY15117_c33570 BAX17768 3632896 3633624 - penicillin-binding_protein_2D pbpG_2 BAX17769 3633621 3634274 - enhancing_lycopene_biosynthesis_protein_2 elbB BAX17770 3634504 3636840 - aerobic_respiration_control_sensor_protein_ArcB arcB BAX17771 3636936 3637865 - coproporphyrinogen_III_oxidase MRY15117_c33610 BAX17772 3638446 3642999 + glutamate_synthase_[NADPH]_large_chain precursor gltB BAX17773 3643012 3644430 + glutamate_synthase_[NADPH]_small_chain gltD_4 BAX17774 3644614 3645726 + hypothetical_protein MRY15117_c33640 BAX17775 3645786 3646250 - toxin-antitoxin_biofilm_protein_TabA tabA_2 BAX17776 3646247 3647122 - N-acetylmannosamine_kinase nanK_2 BAX17777 3647119 3647808 - putative_N-acetylmannosamine-6-phosphate 2-epimerase nanE_2 BAX17778 3647856 3649346 - putative_sialic_acid_transporter nanT BAX17779 3649455 3650348 - N-acetylneuraminate_lyase nanA BAX17780 3650470 3651261 - HTH-type_transcriptional_regulator_LutR lutR_2 BAX17781 3651641 3653008 + putative_cryptic_C4-dicarboxylate_transporter DcuD dcuD_2 BAX17782 3653052 3653549 - stringent_starvation_protein_B sspB BAX17783 3653555 3654193 - stringent_starvation_protein_A sspA BAX17784 3654463 3655257 - hypothetical_protein MRY15117_c33740 BAX17785 3655412 3655804 - 30S_ribosomal_protein_S9 rpsI BAX17786 3655820 3656248 - 50S_ribosomal_protein_L13 rplM BAX17787 3656467 3657594 - hypothetical_protein MRY15117_c33770 BAX17788 3657788 3658186 + inner_membrane_protein_YhcB yhcB BAX17789 3658340 3659707 + periplasmic_pH-dependent_serine_endoprotease DegQ precursor degQ BAX17790 3659797 3660864 + serine_endoprotease_DegS degS_1 BAX17791 3660927 3661865 - malate_dehydrogenase mdh_2 BAX17792 3662300 3662770 + arginine_repressor argR BAX17793 3663136 3663399 + multiple_stress_resistance_protein_BhsA precursor bhsA_5 BAX17794 3663456 3663728 - putative_barstar MRY15117_c33840 BAX17795 3663820 3665787 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeB aaeB_2 BAX17796 3665793 3666725 - p-hydroxybenzoic_acid_efflux_pump_subunit_AaeA aaeA_2 BAX17797 3666733 3666936 - efflux_system_membrane_protein MRY15117_c33870 BAX17798 3667119 3668048 + HTH-type_transcriptional_regulator_DmlR dmlR_7 Table of Blast hits (query gene, subject gene, %identity, blast score, %coverage, e-value): PJR32595.1 BAX17775 98 311 100.0 5e-106 PJR32596.1 BAX17776 98 558 100.0 0.0 PJR32597.1 BAX17777 99 456 100.0 1e-160