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MultiGeneBlast hits
Select gene cluster alignment
51. CP029164_0 Escherichia coli strain 104 chromosome, complete genome.
52. CP024127_0 Escherichia coli strain 14EC001 chromosome, complete genome.
53. CP023346_0 Escherichia coli strain ETEC-2265 chromosome, complete genome.
54. CP011511_0 Shigella boydii strain ATCC 9210, complete genome.
55. CP000036_0 Shigella boydii Sb227, complete genome.
56. AF402312_0 Shigella boydii serotype 4 O-antigen gene cluster, partial seq...
57. AB812021_0 Escherichia coli genes for O-antigen biosynthetic locus, parti...
58. CP000034_0 Shigella dysenteriae Sd197, complete genome.
59. CP006736_0 Shigella dysenteriae 1617, complete genome.
60. AY585348_0 Shigella dysenteriae strain 1617 O-Ag gene cluster, complete s...
61. KJ755548_0 Escherichia coli strain CDC 63-57 serotype O139:H1 O-antigen g...
62. DQ109552_0 Escherichia coli O139 O-antigen gene cluster, complete sequence.
63. AF402313_0 Shigella boydii serotype 5 O-antigen gene cluster, partial seq...
64. CP029492_0 Escherichia coli strain HS30-1 chromosome, complete genome.
65. CP024155_0 Escherichia coli strain 14EC047 chromosome, complete genome.
66. MF322752_0 Shigella dysenteriae strain 93-119 O-antigen gene cluster, par...
67. LC177546_0 Escherichia coli DNA, O-antigen biosynthesis gene cluster OgN2...
68. CP041300_0 Escherichia coli O1:H42 strain CLSC36 chromosome, complete gen...
69. CP040919_0 Escherichia coli strain FC853_EC chromosome, complete genome.
70. CP033850_0 Escherichia coli strain FDAARGOS_497 chromosome, complete genome.
71. CP033092_0 Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775 chromosome,...
72. CP027255_0 Escherichia coli strain EC11 chromosome, complete genome.
73. CP026491_0 Escherichia coli strain HS13-1 chromosome, complete genome.
74. CP023364_0 Escherichia coli strain 144 chromosome, complete genome.
75. CP020545_0 Escherichia coli strain ZJ3920 chromosome, complete genome.
76. CP019903_0 Escherichia coli strain MDR_56 chromosome, complete genome.
77. CP019029_0 Escherichia coli strain Ecol_881.
78. CP015834_0 Escherichia coli strain MS6198, complete genome.
79. CP012781_0 Escherichia coli strain A18 genome.
80. CP012635_0 Escherichia coli strain SF-088, complete genome.
81. CP012633_0 Escherichia coli strain SF-166, complete genome.
82. CP009859_0 Escherichia coli strain ECONIH1, complete genome.
83. CP000468_0 Escherichia coli APEC O1, complete genome.
84. MN172355_0 Escherichia coli strain 16-02258 O-antigen biosynthesis gene c...
85. KJ778793_0 Escherichia coli strain P 7a serotype O20:K17:H- O-antigen gen...
86. CP000800_0 Escherichia coli E24377A, complete genome.
87. EU296406_0 Shigella boydii type 12 O-antigen gene cluster, complete seque...
88. EU294174_0 Shigella dysenteriae O antigen gene cluster, complete sequence.
89. CP019213_0 Escherichia coli strain WCHEC050613 chromosome, complete genome.
90. GU299791_0 Escherichia coli strain G1632 O antigen gene cluster, complete...
91. DQ868764_0 Escherichia coli serogroup O149 O-antigen gene cluster, comple...
92. DQ091854_0 Escherichia coli serotype O149:H10 O-antigen gene cluster, par...
93. CP002729_0 Escherichia coli UMNK88, complete genome.
94. HG428755_0 Escherichia coli PMV-1 main chromosome, complete genome.
95. EU294170_0 Escherichia coli serotype O152 O antigen gene cluster, complet...
96. CP043747_0 Escherichia coli strain CVM N16EC0140 chromosome, complete gen...
97. CP041535_0 Escherichia coli strain 95 chromosome.
98. CP028320_0 Escherichia coli O18:H1 strain CFSAN067215 chromosome, complet...
99. CP019777_0 Escherichia coli NU14 chromosome, complete genome.
100. CP012631_0 Escherichia coli strain SF-173, complete genome.
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP029164
: Escherichia coli strain 104 chromosome Total score: 5.5 Cumulative Blast bit score: 2050
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
AWH70340
Location: 2733758-2735236
NCBI BlastP on this gene
DDV95_13840
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AWH70341
Location: 2735608-2736888
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AWH70342
Location: 2736885-2738105
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AWH70343
Location: 2738116-2739510
NCBI BlastP on this gene
DDV95_13855
GalU regulator GalF
Accession:
AWH70344
Location: 2739685-2740578
NCBI BlastP on this gene
DDV95_13860
hypothetical protein
Accession:
AWH70345
Location: 2740615-2740878
NCBI BlastP on this gene
DDV95_13865
dTDP-glucose 4,6-dehydratase
Accession:
AWH70346
Location: 2740951-2742036
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AWH70347
Location: 2742036-2742935
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
DDV95_13875
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AWH70348
Location: 2742993-2743871
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
DDV95_13880
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AWH70349
Location: 2743876-2744445
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 3e-76
NCBI BlastP on this gene
rfbC
hypothetical protein
Accession:
AWH70350
Location: 2744432-2745274
NCBI BlastP on this gene
DDV95_13890
glycosyl transferase
Accession:
AWH70351
Location: 2745271-2746383
NCBI BlastP on this gene
DDV95_13895
O53 family O-antigen flippase
Accession:
AWH70352
Location: 2746364-2747593
NCBI BlastP on this gene
wzx
glycosyltransferase family 1 protein
Accession:
AWH70353
Location: 2747594-2748688
NCBI BlastP on this gene
DDV95_13905
O53 family O-antigen polymerase
Accession:
AWH70354
Location: 2748692-2749984
NCBI BlastP on this gene
wzy
DUF1972 domain-containing protein
Accession:
AWH72501
Location: 2749977-2751032
NCBI BlastP on this gene
DDV95_13915
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP024127
: Escherichia coli strain 14EC001 chromosome Total score: 5.5 Cumulative Blast bit score: 2050
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
AUK21369
Location: 1822591-1824069
NCBI BlastP on this gene
CR534_09475
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AUK21370
Location: 1824141-1825421
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AUK21371
Location: 1825418-1826638
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AUK21372
Location: 1826649-1828043
NCBI BlastP on this gene
CR534_09490
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AUK21373
Location: 1828218-1829111
NCBI BlastP on this gene
CR534_09495
hypothetical protein
Accession:
AUK21374
Location: 1829148-1829411
NCBI BlastP on this gene
CR534_09500
dTDP-glucose 4,6-dehydratase
Accession:
AUK21375
Location: 1829484-1830569
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 613
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AUK21376
Location: 1830569-1831468
BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CR534_09510
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AUK21377
Location: 1831526-1832404
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CR534_09515
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AUK21378
Location: 1832409-1832957
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 237
Sequence coverage: 100 %
E-value: 4e-76
NCBI BlastP on this gene
rfbC
glycosyltransferase WbsX family protein
Accession:
AUK21379
Location: 1832964-1834037
NCBI BlastP on this gene
CR534_09525
hypothetical protein
Accession:
AUK21380
Location: 1834030-1834761
NCBI BlastP on this gene
CR534_09530
O115 family O-antigen flippase
Accession:
AUK21381
Location: 1834754-1836241
NCBI BlastP on this gene
CR534_09535
IS1 family transposase
Accession:
AUK21382
Location: 1836301-1836995
NCBI BlastP on this gene
CR534_09540
hypothetical protein
Accession:
AUK21383
Location: 1837049-1838116
NCBI BlastP on this gene
CR534_09545
glycosyltransferase family 2 protein
Accession:
AUK21384
Location: 1838113-1839039
NCBI BlastP on this gene
CR534_09550
acyltransferase
Accession:
AUK24432
Location: 1839170-1839586
NCBI BlastP on this gene
CR534_09555
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP023346
: Escherichia coli strain ETEC-2265 chromosome Total score: 5.5 Cumulative Blast bit score: 2050
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
ATB08887
Location: 2329153-2330631
NCBI BlastP on this gene
CJU64_12330
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
ATB08886
Location: 2327801-2329081
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
ATB08885
Location: 2326584-2327804
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
ATB08884
Location: 2325179-2326573
NCBI BlastP on this gene
CJU64_12315
UTP--glucose-1-phosphate uridylyltransferase
Accession:
ATB08883
Location: 2324111-2325004
NCBI BlastP on this gene
CJU64_12310
hypothetical protein
Accession:
ATB08882
Location: 2323811-2324074
NCBI BlastP on this gene
CJU64_12305
dTDP-glucose 4,6-dehydratase
Accession:
ATB08881
Location: 2322653-2323738
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 613
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
ATB08880
Location: 2321754-2322653
BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CJU64_12295
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
ATB08879
Location: 2320818-2321696
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CJU64_12290
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ATB08878
Location: 2320265-2320813
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 237
Sequence coverage: 100 %
E-value: 4e-76
NCBI BlastP on this gene
rfbC
glycosyltransferase WbsX family protein
Accession:
ATB08877
Location: 2319185-2320258
NCBI BlastP on this gene
CJU64_12280
hypothetical protein
Accession:
ATB08876
Location: 2318461-2319192
NCBI BlastP on this gene
CJU64_12275
O115 family O-antigen flippase
Accession:
ATB08875
Location: 2316981-2318468
NCBI BlastP on this gene
CJU64_12270
IS1 family transposase
Accession:
ATB08874
Location: 2316227-2316921
NCBI BlastP on this gene
CJU64_12265
hypothetical protein
Accession:
ATB08873
Location: 2315106-2316173
NCBI BlastP on this gene
CJU64_12260
glycosyltransferase family 2 protein
Accession:
ATB08872
Location: 2314183-2315109
NCBI BlastP on this gene
CJU64_12255
galactoside O-acetyltransferase
Accession:
ATB11568
Location: 2313636-2314052
NCBI BlastP on this gene
CJU64_12250
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP011511
: Shigella boydii strain ATCC 9210 Total score: 5.5 Cumulative Blast bit score: 2050
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
AKI66088
Location: 1007987-1009465
NCBI BlastP on this gene
ABE81_05435
colanic acid biosynthesis protein
Accession:
AKI66089
Location: 1009837-1011117
NCBI BlastP on this gene
ABE81_05440
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AKI66090
Location: 1011114-1012334
NCBI BlastP on this gene
ABE81_05445
colanic acid biosynthesis protein
Accession:
AKI66091
Location: 1012345-1013739
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AKI66092
Location: 1013914-1014807
NCBI BlastP on this gene
ABE81_05455
dTDP-glucose 4,6-dehydratase
Accession:
AKI66093
Location: 1015180-1016265
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
ABE81_05460
dTDP-4-dehydrorhamnose reductase
Accession:
AKI66094
Location: 1016265-1017164
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
ABE81_05465
glucose-1-phosphate thymidylyltransferase
Accession:
AKI66095
Location: 1017222-1018100
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
ABE81_05470
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AKI66096
Location: 1018105-1018674
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 3e-76
NCBI BlastP on this gene
ABE81_05475
hypothetical protein
Accession:
AKI66097
Location: 1018661-1019503
NCBI BlastP on this gene
ABE81_05480
glycosyl transferase
Accession:
AKI66098
Location: 1019500-1020612
NCBI BlastP on this gene
ABE81_05485
flippase
Accession:
AKI66099
Location: 1020593-1021822
NCBI BlastP on this gene
ABE81_05490
hypothetical protein
Accession:
AKI66100
Location: 1021823-1022917
NCBI BlastP on this gene
ABE81_05495
polymerase
Accession:
AKI66101
Location: 1022921-1024213
NCBI BlastP on this gene
ABE81_05500
glycosyl transferase
Accession:
AKI69458
Location: 1024206-1025261
NCBI BlastP on this gene
ABE81_05505
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP000036
: Shigella boydii Sb227 Total score: 5.5 Cumulative Blast bit score: 2050
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
probable export protein
Accession:
ABB65543
Location: 889383-890861
NCBI BlastP on this gene
wzxC
putative galactokinase
Accession:
ABB65542
Location: 887731-889011
NCBI BlastP on this gene
wcaK
putative colanic acid biosynthesis glycosyl transferase
Accession:
ABB65541
Location: 886514-887734
NCBI BlastP on this gene
wcaL
conserved hypothetical protein
Accession:
ABB65540
Location: 885109-886503
NCBI BlastP on this gene
wcaM
probable UDP-gal transferase
Accession:
ABB65539
Location: 884041-884934
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
ABB65538
Location: 882583-883668
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-6-deoxy-L-mannose-dehydrogenase
Accession:
ABB65537
Location: 881684-882583
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase
Accession:
ABB65536
Location: 880748-881626
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ABB65535
Location: 880174-880743
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 3e-76
NCBI BlastP on this gene
rfbC
putative glycosyl transferase
Accession:
ABB65534
Location: 879345-880187
NCBI BlastP on this gene
wbdE
putative glycosyl transferase
Accession:
ABB65533
Location: 878236-879348
NCBI BlastP on this gene
wbdF
O-antigen flippase
Accession:
ABB65532
Location: 877026-878255
NCBI BlastP on this gene
wzx
putative glycosyl transferase
Accession:
ABB65531
Location: 875931-876941
NCBI BlastP on this gene
wbdG
O-antigen polymerase
Accession:
ABB65530
Location: 874635-875927
NCBI BlastP on this gene
wzy
putative glycosyl transferase
Accession:
ABB65529
Location: 873587-874663
NCBI BlastP on this gene
wbdS
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AF402312
: Shigella boydii serotype 4 O-antigen gene cluster Total score: 5.5 Cumulative Blast bit score: 2050
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
putative glucose-1-phosphate uridylyltransferase
Accession:
AAL27309
Location: 1-765
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase
Accession:
AAL27310
Location: 1138-2223
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-6-deoxy-L-mannose-dehydrogenase
Accession:
AAL27311
Location: 2223-3122
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
AAL27312
Location: 3180-4058
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession:
AAL27313
Location: 4063-4632
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 3e-76
NCBI BlastP on this gene
rmlC
putative glycosyl transferase
Accession:
AAL27314
Location: 4619-5461
NCBI BlastP on this gene
wbdE
putative glycosyl transferase
Accession:
AAL27315
Location: 5458-6570
NCBI BlastP on this gene
wbdF
O-antigen flippase
Accession:
AAL27316
Location: 6551-7780
NCBI BlastP on this gene
wzx
putative glycosyl transferase
Accession:
AAL27317
Location: 7781-8875
NCBI BlastP on this gene
wbdG
O-antigen polymerase
Accession:
AAL27318
Location: 8879-10171
NCBI BlastP on this gene
wzy
putative glycosyl transferase
Accession:
AAL27319
Location: 10164-11219
NCBI BlastP on this gene
wbdS
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AB812021
: Escherichia coli genes for O-antigen biosynthetic locus Total score: 5.5 Cumulative Blast bit score: 2050
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession:
BAQ01033
Location: 2-856
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession:
BAQ01034
Location: 1019-1924
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
BAQ01035
Location: 2297-3382
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
BAQ01036
Location: 3382-4281
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
BAQ01037
Location: 4339-5217
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
BAQ01038
Location: 5222-5791
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 4e-76
NCBI BlastP on this gene
rmlC
putative glycosyltransferase
Accession:
BAQ01039
Location: 5778-6620
NCBI BlastP on this gene
BAQ01039
putative glycosyltransferase
Accession:
BAQ01040
Location: 6617-7729
NCBI BlastP on this gene
BAQ01040
O-antigen flippase
Accession:
BAQ01041
Location: 7710-8939
NCBI BlastP on this gene
wzx
putative glycosyltransferase
Accession:
BAQ01042
Location: 8940-10034
NCBI BlastP on this gene
BAQ01042
O-antigen polymerase
Accession:
BAQ01043
Location: 10038-11330
NCBI BlastP on this gene
wzy
putative glycosyltransferase
Accession:
BAQ01044
Location: 11323-12378
NCBI BlastP on this gene
BAQ01044
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP000034
: Shigella dysenteriae Sd197 Total score: 5.5 Cumulative Blast bit score: 2049
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
suppressor of ompF assembly mutants
Accession:
ABB62283
Location: 1999870-2001723
NCBI BlastP on this gene
asmA
conserved hypothetical protein
Accession:
ABB62284
Location: 2001776-2002066
NCBI BlastP on this gene
SDY_2199
hypothetical protein
Accession:
ABB62285
Location: 2002056-2002277
NCBI BlastP on this gene
SDY_2200
putative transport protein
Accession:
ABB62286
Location: 2002615-2004237
NCBI BlastP on this gene
yegH
iso-IS1 ORF2
Accession:
ABB62287
Location: 2004903-2005298
NCBI BlastP on this gene
SDY_2202
probable UDP-gal transferase
Accession:
ABB62288
Location: 2005517-2006410
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
ABB62289
Location: 2006782-2007867
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-6-deoxy-L-mannose-dehydrogenase
Accession:
ABB62290
Location: 2007867-2008766
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase
Accession:
ABB62291
Location: 2008824-2009702
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ABB62292
Location: 2009705-2010262
BlastP hit with rmlC
Percentage identity: 65 %
BlastP bit score: 244
Sequence coverage: 100 %
E-value: 1e-78
NCBI BlastP on this gene
rfbC
putative O-antigen transporter
Accession:
ABB62293
Location: 2010259-2011449
NCBI BlastP on this gene
rfbX
O-antigen polymerase
Accession:
ABB62294
Location: 2011446-2012588
NCBI BlastP on this gene
rfc
rhamnosyl transferase II
Accession:
ABB62295
Location: 2012581-2013429
NCBI BlastP on this gene
rfbR
rhamnosyl transferase I
Accession:
ABB62296
Location: 2013454-2014365
NCBI BlastP on this gene
rfbQ
gluconate-6-phosphate dehydrogenase
Accession:
ABB62297
Location: 2015551-2016957
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP006736
: Shigella dysenteriae 1617 Total score: 5.5 Cumulative Blast bit score: 2048
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
Outer membrane assembly protein
Accession:
AHA65804
Location: 1959610-1961460
NCBI BlastP on this gene
Asd1617_02977
Transcriptional regulator
Accession:
AHA65805
Location: 1961513-1961821
NCBI BlastP on this gene
Asd1617_02978
Phage-related protein
Accession:
AHA65806
Location: 1961793-1962014
NCBI BlastP on this gene
Asd1617_02979
Integral membrane protein
Accession:
AHA65807
Location: 1962352-1963806
NCBI BlastP on this gene
Asd1617_02980
Transposase
Accession:
AHA65808
Location: 1963803-1963946
NCBI BlastP on this gene
Asd1617_02981
Transposase
Accession:
AHA65809
Location: 1963928-1964137
NCBI BlastP on this gene
Asd1617_02982
hypothetical protein
Accession:
AHA65810
Location: 1964161-1964334
NCBI BlastP on this gene
Asd1617_02983
Transposase
Accession:
AHA65811
Location: 1964324-1964497
NCBI BlastP on this gene
Asd1617_02984
Transposase
Accession:
AHA65812
Location: 1964393-1964521
NCBI BlastP on this gene
Asd1617_02985
hypothetical protein
Accession:
AHA65813
Location: 1964531-1964716
NCBI BlastP on this gene
Asd1617_02986
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AHA65814
Location: 1964780-1965685
NCBI BlastP on this gene
Asd1617_02987
DTDP-glucose 4,6-dehydratase
Accession:
AHA65815
Location: 1966057-1967142
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
Asd1617_02988
DTDP-4-dehydrorhamnose reductase
Accession:
AHA65816
Location: 1967142-1968041
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 604
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
Asd1617_02989
Glucose-1-phosphate thymidylyltransferase
Accession:
AHA65817
Location: 1968099-1968977
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
Asd1617_02990
DTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AHA65818
Location: 1968979-1969536
BlastP hit with rmlC
Percentage identity: 65 %
BlastP bit score: 244
Sequence coverage: 100 %
E-value: 1e-78
NCBI BlastP on this gene
Asd1617_02991
Glycosyltransferase
Accession:
AHA65819
Location: 1972923-1973405
NCBI BlastP on this gene
Asd1617_02992
6-phosphogluconate dehydrogenase
Accession:
AHA65820
Location: 1973513-1974919
NCBI BlastP on this gene
Asd1617_02993
UDP-glucose 6-dehydrogenase
Accession:
AHA65821
Location: 1975169-1976335
NCBI BlastP on this gene
Asd1617_02994
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AY585348
: Shigella dysenteriae strain 1617 O-Ag gene cluster Total score: 5.5 Cumulative Blast bit score: 2048
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-D-glucose 4,6-dehydratase
Accession:
AAT91850
Location: 756-1841
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dyhydrorhamnose reductase
Accession:
AAT91847
Location: 1841-2740
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 604
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbC
glucose-1-phosphatate thymidylyltransferase
Accession:
AAT91851
Location: 2798-3676
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AAT91848
Location: 3679-4236
BlastP hit with rmlC
Percentage identity: 65 %
BlastP bit score: 244
Sequence coverage: 100 %
E-value: 1e-78
NCBI BlastP on this gene
rfbD
O-Ag transporter
Accession:
AAT91852
Location: 4233-5423
NCBI BlastP on this gene
rfbX
O-Ag polymerase
Accession:
AAT91849
Location: 5420-6562
NCBI BlastP on this gene
rfc
putative rhamnosyltransferase
Accession:
AAT91853
Location: 6555-7403
NCBI BlastP on this gene
rfbR
putative rhamnosyltransferase
Accession:
AAT91854
Location: 7428-8339
NCBI BlastP on this gene
rfbQ
putative galactosyltransferase
Accession:
AAT91855
Location: 8349-8783
NCBI BlastP on this gene
AAT91855
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KJ755548
: Escherichia coli strain CDC 63-57 serotype O139:H1 O-antigen gene cluster Total score: 5.5 Cumulative Blast bit score: 2046
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-glucose 4,6-dehydratase
Accession:
AIG62431
Location: 107-1192
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 616
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
AIG62432
Location: 1192-2091
BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase 1
Accession:
AIG62433
Location: 2149-3030
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AIG62434
Location: 3032-3562
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 239
Sequence coverage: 96 %
E-value: 7e-77
NCBI BlastP on this gene
rmlC
O-antigen polymerase
Accession:
AIG62435
Location: 3889-5127
NCBI BlastP on this gene
wzy
glycosyl transferase family 2
Accession:
AIG62436
Location: 5124-5996
NCBI BlastP on this gene
AIG62436
O-antigen flippase
Accession:
AIG62437
Location: 5983-7203
NCBI BlastP on this gene
wzx
glycosyl transferase
Accession:
AIG62438
Location: 7193-8251
NCBI BlastP on this gene
PROKKA_00008
N,
Accession:
AIG62439
Location: 8244-9401
NCBI BlastP on this gene
pglA
rhamnosyltransferase
Accession:
AIG62440
Location: 9391-10155
NCBI BlastP on this gene
wbbL
Query: Escherichia coli strain O146 O antigen gene cluster, complete
DQ109552
: Escherichia coli O139 O-antigen gene cluster Total score: 5.5 Cumulative Blast bit score: 2046
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-glucose 4,6-dehydratase
Accession:
AAZ85714
Location: 1140-2225
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 616
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession:
AAZ85715
Location: 2225-3124
BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
AAZ85716
Location: 3182-4063
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AAZ85717
Location: 4065-4595
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 239
Sequence coverage: 96 %
E-value: 7e-77
NCBI BlastP on this gene
rmlC
O-antigen polymerase
Accession:
AAZ85718
Location: 4922-6160
NCBI BlastP on this gene
wzy
glycosyltransferase
Accession:
AAZ85719
Location: 6157-7029
NCBI BlastP on this gene
wfaI
O-antigen flippase
Accession:
AAZ85720
Location: 7016-8236
NCBI BlastP on this gene
wzx
glycosyltransferase
Accession:
AAZ85721
Location: 8226-9284
NCBI BlastP on this gene
wfaJ
glycosyltransferase
Accession:
AAZ85722
Location: 9277-10434
NCBI BlastP on this gene
wfaK
glycosyltransferase
Accession:
AAZ85723
Location: 10424-11188
NCBI BlastP on this gene
wfaL
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AF402313
: Shigella boydii serotype 5 O-antigen gene cluster Total score: 5.5 Cumulative Blast bit score: 2046
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
glucose-1-phosphate uridylyltransferase
Accession:
AAL27321
Location: 1-765
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase
Accession:
AAL27322
Location: 1138-2223
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-6-deoxy-L-mannose-dehydrogenase
Accession:
AAL27323
Location: 2223-3122
BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
AAL27324
Location: 3180-4055
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 594
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession:
AAL27325
Location: 4063-4599
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 239
Sequence coverage: 99 %
E-value: 7e-77
NCBI BlastP on this gene
rmlC
putative glycosyl transferase
Accession:
AAL27326
Location: 4614-5375
NCBI BlastP on this gene
wbdT
O-antigen polymerase
Accession:
AAL27327
Location: 5379-6470
NCBI BlastP on this gene
wzy
putative glycosyl transferase
Accession:
AAL27328
Location: 6463-7263
NCBI BlastP on this gene
wbdU
O-antigen flippase
Accession:
AAL27329
Location: 7263-8411
NCBI BlastP on this gene
wzx
putative glycosyl transferase
Accession:
AAL27330
Location: 8408-9010
NCBI BlastP on this gene
wbdV
putative glycosyl transferase
Accession:
AAL27331
Location: 9007-10089
NCBI BlastP on this gene
wbdW
putative glycosyl transferase
Accession:
AAL27332
Location: 10086-10847
NCBI BlastP on this gene
wbdX
mannose-1-phosphate guanylyltransferase
Accession:
AAL27333
Location: 10828-12255
NCBI BlastP on this gene
manC
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP029492
: Escherichia coli strain HS30-1 chromosome Total score: 5.5 Cumulative Blast bit score: 2046
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
AWU90122
Location: 1695143-1696621
NCBI BlastP on this gene
DKQ63_08595
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AWU90123
Location: 1697283-1698563
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AWU90124
Location: 1698560-1699780
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AWU90125
Location: 1699791-1701185
NCBI BlastP on this gene
DKQ63_08610
GalU regulator GalF
Accession:
AWU90126
Location: 1701360-1702253
NCBI BlastP on this gene
DKQ63_08615
hypothetical protein
Accession:
AWU90127
Location: 1702290-1702553
NCBI BlastP on this gene
DKQ63_08620
dTDP-glucose 4,6-dehydratase
Accession:
AWU90128
Location: 1702626-1703711
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AWU90129
Location: 1703711-1704610
BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
DKQ63_08630
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AWU90130
Location: 1704668-1705546
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 594
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
DKQ63_08635
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AWU90131
Location: 1705551-1706084
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 239
Sequence coverage: 96 %
E-value: 1e-76
NCBI BlastP on this gene
rfbC
DUF616 domain-containing protein
Accession:
AWU90132
Location: 1706183-1706926
NCBI BlastP on this gene
DKQ63_08645
hypothetical protein
Accession:
AWU90133
Location: 1706948-1707976
NCBI BlastP on this gene
DKQ63_08650
hypothetical protein
Accession:
AWU90134
Location: 1707984-1708829
NCBI BlastP on this gene
DKQ63_08655
hypothetical protein
Accession:
AWU90135
Location: 1708826-1709962
NCBI BlastP on this gene
DKQ63_08660
glycosyl transferase
Accession:
AWU90136
Location: 1709959-1710843
NCBI BlastP on this gene
DKQ63_08665
phosphoribosyltransferase
Accession:
AWU90137
Location: 1710860-1711843
NCBI BlastP on this gene
DKQ63_08670
lipopolysaccharide biosynthesis protein
Accession:
AWU90138
Location: 1711885-1713312
NCBI BlastP on this gene
DKQ63_08675
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP024155
: Escherichia coli strain 14EC047 chromosome Total score: 5.5 Cumulative Blast bit score: 2046
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
AUJ90692
Location: 1898580-1900058
NCBI BlastP on this gene
CR540_09920
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AUJ93633
Location: 1900238-1901518
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AUJ90693
Location: 1901515-1902735
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AUJ90694
Location: 1902746-1904140
NCBI BlastP on this gene
CR540_09935
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AUJ90695
Location: 1904315-1905208
NCBI BlastP on this gene
CR540_09940
hypothetical protein
Accession:
AUJ90696
Location: 1905245-1905508
NCBI BlastP on this gene
CR540_09945
dTDP-glucose 4,6-dehydratase
Accession:
AUJ90697
Location: 1905581-1906666
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 610
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AUJ90698
Location: 1906666-1907565
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CR540_09955
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AUJ90699
Location: 1907623-1908501
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 594
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CR540_09960
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AUJ90700
Location: 1908506-1909054
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 237
Sequence coverage: 100 %
E-value: 4e-76
NCBI BlastP on this gene
rfbC
glycosyltransferase WbsX family protein
Accession:
AUJ90701
Location: 1909061-1910134
NCBI BlastP on this gene
CR540_09970
hypothetical protein
Accession:
AUJ90702
Location: 1910127-1910858
NCBI BlastP on this gene
CR540_09975
O115 family O-antigen flippase
Accession:
AUJ90703
Location: 1910851-1912338
NCBI BlastP on this gene
CR540_09980
IS1 family transposase
Accession:
AUJ90704
Location: 1912398-1913092
NCBI BlastP on this gene
CR540_09985
hypothetical protein
Accession:
AUJ90705
Location: 1913146-1914213
NCBI BlastP on this gene
CR540_09990
glycosyltransferase family 2 protein
Accession:
AUJ90706
Location: 1914210-1915136
NCBI BlastP on this gene
CR540_09995
acyltransferase
Accession:
AUJ93634
Location: 1915267-1915683
NCBI BlastP on this gene
CR540_10000
Query: Escherichia coli strain O146 O antigen gene cluster, complete
MF322752
: Shigella dysenteriae strain 93-119 O-antigen gene cluster Total score: 5.5 Cumulative Blast bit score: 2045
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AXC25100
Location: 1-894
NCBI BlastP on this gene
galF
hypothetical protein
Accession:
AXC25101
Location: 931-1194
NCBI BlastP on this gene
AXC25101
dTDP-glucose 4,6-dehydratase
Accession:
AXC25102
Location: 1266-2351
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AXC25103
Location: 2351-3250
BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase 1
Accession:
AXC25104
Location: 3308-4186
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA1
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AXC25105
Location: 4191-4742
BlastP hit with rmlC
Percentage identity: 65 %
BlastP bit score: 241
Sequence coverage: 97 %
E-value: 1e-77
NCBI BlastP on this gene
rfbC
putative O-antigen transporter
Accession:
AXC25106
Location: 4772-5977
NCBI BlastP on this gene
rfbX
glycosyltransferase family 2
Accession:
AXC25107
Location: 5974-6891
NCBI BlastP on this gene
AXC25107
hypothetical protein
Accession:
AXC25108
Location: 6910-8214
NCBI BlastP on this gene
AXC25108
galactoside O-acetyltransferase
Accession:
AXC25109
Location: 8204-8764
NCBI BlastP on this gene
lacA
UDP-glc:alpha-D-glcNac-diphosphoundecaprenol beta-1,3-glucosyltransferase wfgD
Accession:
AXC25110
Location: 8783-9712
NCBI BlastP on this gene
wfgD
N,
Accession:
AXC25111
Location: 9743-10849
NCBI BlastP on this gene
pglA
N-acetylgalactosamine-N,
Accession:
AXC25112
Location: 10875-11933
NCBI BlastP on this gene
pglJ
Query: Escherichia coli strain O146 O antigen gene cluster, complete
LC177546
: Escherichia coli DNA, O-antigen biosynthesis gene cluster OgN2, strain: E1657. Total score: 5.5 Cumulative Blast bit score: 2045
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession:
BAV90409
Location: 14-1408
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession:
BAV90410
Location: 1571-2476
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
BAV90411
Location: 2848-3933
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 614
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
BAV90412
Location: 3933-4832
BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
BAV90413
Location: 4890-5768
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
BAV90414
Location: 5773-6321
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 241
Sequence coverage: 96 %
E-value: 2e-77
NCBI BlastP on this gene
rmlC
putative glycosyltranslocase
Accession:
BAV90415
Location: 6377-7357
NCBI BlastP on this gene
BAV90415
putative glycosyltranslocase
Accession:
BAV90416
Location: 7354-8097
NCBI BlastP on this gene
BAV90416
O-antigen polymerase
Accession:
BAV90417
Location: 8113-9126
NCBI BlastP on this gene
wzy
putative dehydrogenase
Accession:
BAV90418
Location: 9233-10519
NCBI BlastP on this gene
BAV90418
putative epimerase
Accession:
BAV90419
Location: 10534-11565
NCBI BlastP on this gene
BAV90419
putative glycosyltranslocase
Accession:
BAV90420
Location: 11662-12414
NCBI BlastP on this gene
BAV90420
O-antigen flippase
Accession:
BAV90421
Location: 12414-13655
NCBI BlastP on this gene
wzx
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP041300
: Escherichia coli O1:H42 strain CLSC36 chromosome Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Accession:
QDJ70828
Location: 1935157-1936635
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QDJ70829
Location: 1936708-1937988
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QDJ70830
Location: 1937985-1939205
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QDJ70831
Location: 1939216-1940610
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QDJ70832
Location: 1940785-1941678
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QDJ70833
Location: 1942051-1943136
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QDJ70834
Location: 1943136-1944035
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QDJ70835
Location: 1944093-1944971
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QDJ70836
Location: 1944976-1945524
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 247
Sequence coverage: 96 %
E-value: 5e-80
NCBI BlastP on this gene
rfbC
oligosaccharide flippase family protein
Accession:
QDJ70837
Location: 1945556-1946794
NCBI BlastP on this gene
FK541_10270
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession:
FK541_10275
Location: 1946804-1947929
NCBI BlastP on this gene
FK541_10275
glycosyltransferase family 4 protein
Accession:
QDJ70838
Location: 1947944-1949008
NCBI BlastP on this gene
FK541_10280
EpsG family protein
Accession:
QDJ70839
Location: 1949060-1950064
NCBI BlastP on this gene
FK541_10285
glycosyltransferase family 2 protein
Accession:
QDJ70840
Location: 1950066-1951025
NCBI BlastP on this gene
FK541_10290
glycosyltransferase family 1 protein
Accession:
QDJ70841
Location: 1951035-1952099
NCBI BlastP on this gene
FK541_10295
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP040919
: Escherichia coli strain FC853_EC chromosome Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Accession:
QDB95412
Location: 1794592-1796070
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QDB95413
Location: 1796143-1797423
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QDB95414
Location: 1797420-1798640
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QDB95415
Location: 1798651-1800045
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QDB95416
Location: 1800220-1801113
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QDB95417
Location: 1801486-1802571
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QDB95418
Location: 1802571-1803470
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QDB95419
Location: 1803528-1804406
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QDB95420
Location: 1804411-1804959
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 247
Sequence coverage: 96 %
E-value: 5e-80
NCBI BlastP on this gene
rfbC
flippase
Accession:
FH485_08730
Location: 1804991-1806227
NCBI BlastP on this gene
FH485_08730
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession:
QDB95421
Location: 1806237-1807364
NCBI BlastP on this gene
FH485_08735
glycosyltransferase family 4 protein
Accession:
QDB95422
Location: 1807379-1808443
NCBI BlastP on this gene
FH485_08740
EpsG family protein
Accession:
QDB95423
Location: 1808495-1809499
NCBI BlastP on this gene
FH485_08745
glycosyltransferase family 2 protein
Accession:
QDB95424
Location: 1809501-1810460
NCBI BlastP on this gene
FH485_08750
glycosyltransferase family 1 protein
Accession:
QDB95425
Location: 1810470-1811534
NCBI BlastP on this gene
FH485_08755
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP033850
: Escherichia coli strain FDAARGOS_497 chromosome Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
AYZ42791
Location: 4698466-4699944
NCBI BlastP on this gene
EGY17_24905
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AYZ43450
Location: 4697113-4698393
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AYZ42790
Location: 4695896-4697116
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AYZ42789
Location: 4694491-4695885
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AYZ42788
Location: 4693423-4694316
NCBI BlastP on this gene
EGY17_24885
dTDP-glucose 4,6-dehydratase
Accession:
AYZ42787
Location: 4691965-4693050
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AYZ42786
Location: 4691066-4691965
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
EGY17_24875
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AYZ42785
Location: 4690130-4691008
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AYZ42784
Location: 4689577-4690125
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 247
Sequence coverage: 96 %
E-value: 5e-80
NCBI BlastP on this gene
rfbC
flippase
Accession:
AYZ42783
Location: 4688307-4689545
NCBI BlastP on this gene
EGY17_24860
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession:
AYZ42782
Location: 4687170-4688297
NCBI BlastP on this gene
EGY17_24855
glycosyl transferase family 2
Accession:
AYZ42781
Location: 4686091-4687155
NCBI BlastP on this gene
EGY17_24850
EpsG family protein
Accession:
AYZ42780
Location: 4685035-4686039
NCBI BlastP on this gene
EGY17_24845
glycosyltransferase family 2 protein
Accession:
AYZ42779
Location: 4684074-4685033
NCBI BlastP on this gene
EGY17_24840
glycosyltransferase family 1 protein
Accession:
AYZ42778
Location: 4683000-4684064
NCBI BlastP on this gene
EGY17_24835
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP033092
: Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775 chromosome Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
AYO70872
Location: 1940763-1942241
NCBI BlastP on this gene
EAS44_01220
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AYO70873
Location: 1942403-1943683
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AYO70874
Location: 1943680-1944900
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AYO70875
Location: 1944911-1946305
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AYO70876
Location: 1946480-1947373
NCBI BlastP on this gene
EAS44_01240
dTDP-glucose 4,6-dehydratase
Accession:
AYO70878
Location: 1947746-1948831
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AYO70879
Location: 1948831-1949730
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
EAS44_01255
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AYO70880
Location: 1949788-1950666
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AYO70881
Location: 1950671-1951219
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 247
Sequence coverage: 96 %
E-value: 5e-80
NCBI BlastP on this gene
rfbC
flippase
Accession:
AYO70882
Location: 1951251-1952489
NCBI BlastP on this gene
EAS44_01270
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession:
AYO70883
Location: 1952499-1953626
NCBI BlastP on this gene
EAS44_01275
glycosyl transferase family 2
Accession:
AYO70884
Location: 1953641-1954705
NCBI BlastP on this gene
EAS44_01280
EpsG family protein
Accession:
AYO70885
Location: 1954757-1955761
NCBI BlastP on this gene
EAS44_01285
glycosyltransferase family 2 protein
Accession:
AYO70886
Location: 1955763-1956722
NCBI BlastP on this gene
EAS44_01290
glycosyltransferase family 1 protein
Accession:
AYO70887
Location: 1956732-1957796
NCBI BlastP on this gene
EAS44_01295
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP027255
: Escherichia coli strain EC11 chromosome Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
AVL10693
Location: 3901866-3903344
NCBI BlastP on this gene
C6C13_19870
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AVL10694
Location: 3903620-3904900
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AVL10695
Location: 3904897-3906117
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AVL10696
Location: 3906128-3907522
NCBI BlastP on this gene
C6C13_19885
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AVL10697
Location: 3907697-3908590
NCBI BlastP on this gene
C6C13_19890
hypothetical protein
Accession:
AVL10698
Location: 3908627-3908890
NCBI BlastP on this gene
C6C13_19895
dTDP-glucose 4,6-dehydratase
Accession:
AVL10699
Location: 3908962-3910047
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 613
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AVL10700
Location: 3910047-3910946
BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
C6C13_19905
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AVL10701
Location: 3911004-3911882
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 594
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
C6C13_19910
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AVL10702
Location: 3911887-3912423
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 3e-78
NCBI BlastP on this gene
rfbC
polysaccharide pyruvyl transferase family protein
Accession:
AVL10703
Location: 3912447-3913283
NCBI BlastP on this gene
C6C13_19920
hypothetical protein
Accession:
AVL10704
Location: 3913393-3914847
NCBI BlastP on this gene
C6C13_19925
hypothetical protein
Accession:
AVL10705
Location: 3914837-3915769
NCBI BlastP on this gene
C6C13_19930
hypothetical protein
Accession:
AVL10706
Location: 3915802-3916914
NCBI BlastP on this gene
C6C13_19935
hypothetical protein
Accession:
AVL10707
Location: 3916929-3917771
NCBI BlastP on this gene
C6C13_19940
hypothetical protein
Accession:
AVL10708
Location: 3917764-3918888
NCBI BlastP on this gene
C6C13_19945
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP026491
: Escherichia coli strain HS13-1 chromosome Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
AUY43047
Location: 846560-848038
NCBI BlastP on this gene
C3K24_04645
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AUY43046
Location: 845118-846398
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AUY43045
Location: 843901-845121
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AUY43044
Location: 842496-843890
NCBI BlastP on this gene
C3K24_04630
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AUY43043
Location: 841428-842321
NCBI BlastP on this gene
C3K24_04625
hypothetical protein
Accession:
AUY43042
Location: 841128-841373
NCBI BlastP on this gene
C3K24_04620
dTDP-glucose 4,6-dehydratase
Accession:
AUY43041
Location: 839970-841055
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AUY43040
Location: 839071-839970
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
C3K24_04610
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AUY43039
Location: 838135-839013
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
C3K24_04605
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AUY43038
Location: 837582-838130
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 247
Sequence coverage: 96 %
E-value: 5e-80
NCBI BlastP on this gene
rfbC
flippase
Accession:
AUY43037
Location: 836312-837550
NCBI BlastP on this gene
C3K24_04595
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession:
AUY43036
Location: 835175-836302
NCBI BlastP on this gene
C3K24_04590
glycosyl transferase family 2
Accession:
AUY43035
Location: 834096-835160
NCBI BlastP on this gene
C3K24_04585
EpsG family protein
Accession:
AUY43034
Location: 833040-834044
NCBI BlastP on this gene
C3K24_04580
glycosyltransferase family 2 protein
Accession:
AUY43033
Location: 832079-833038
NCBI BlastP on this gene
C3K24_04575
glycosyltransferase family 1 protein
Accession:
AUY43032
Location: 831005-832069
NCBI BlastP on this gene
C3K24_04570
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP023364
: Escherichia coli strain 144 chromosome Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
ATB87634
Location: 1953604-1955082
NCBI BlastP on this gene
CNQ53_10610
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
ATB87635
Location: 1955154-1956434
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
ATB87636
Location: 1956431-1957651
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
ATB87637
Location: 1957662-1959056
NCBI BlastP on this gene
CNQ53_10625
UTP--glucose-1-phosphate uridylyltransferase
Accession:
ATB87638
Location: 1959231-1960124
NCBI BlastP on this gene
CNQ53_10630
hypothetical protein
Accession:
ATB87639
Location: 1960179-1960424
NCBI BlastP on this gene
CNQ53_10635
dTDP-glucose 4,6-dehydratase
Accession:
ATB87640
Location: 1960497-1961582
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
ATB87641
Location: 1961582-1962481
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CNQ53_10645
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
ATB87642
Location: 1962539-1963417
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CNQ53_10650
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ATB87643
Location: 1963422-1963970
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 247
Sequence coverage: 96 %
E-value: 5e-80
NCBI BlastP on this gene
rfbC
flippase
Accession:
ATB87644
Location: 1964002-1965240
NCBI BlastP on this gene
CNQ53_10660
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession:
ATB87645
Location: 1965250-1966377
NCBI BlastP on this gene
CNQ53_10665
glycosyl transferase family 2
Accession:
ATB87646
Location: 1966392-1967456
NCBI BlastP on this gene
CNQ53_10670
EpsG family protein
Accession:
ATB87647
Location: 1967508-1968512
NCBI BlastP on this gene
CNQ53_10675
glycosyltransferase family 2 protein
Accession:
ATB87648
Location: 1968514-1969473
NCBI BlastP on this gene
CNQ53_10680
glycosyltransferase family 1 protein
Accession:
ATB87649
Location: 1969483-1970547
NCBI BlastP on this gene
CNQ53_10685
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP020545
: Escherichia coli strain ZJ3920 chromosome Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
lipopolysaccharide biosynthesis protein
Accession:
AWG06986
Location: 2094130-2095608
NCBI BlastP on this gene
B6V57_11005
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AWG06985
Location: 2092688-2093968
NCBI BlastP on this gene
B6V57_11000
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AWG06984
Location: 2091471-2092691
NCBI BlastP on this gene
B6V57_10995
colanic acid biosynthesis protein WcaM
Accession:
AWG06983
Location: 2090066-2091460
NCBI BlastP on this gene
B6V57_10990
GalU regulator GalF
Accession:
B6V57_10985
Location: 2089032-2089891
NCBI BlastP on this gene
B6V57_10985
hypothetical protein
Accession:
AWG06982
Location: 2088732-2088977
NCBI BlastP on this gene
B6V57_10980
dTDP-glucose 4,6-dehydratase
Accession:
AWG06981
Location: 2087574-2088659
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
B6V57_10975
NAD(P)-dependent oxidoreductase
Accession:
AWG06980
Location: 2086675-2087574
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
B6V57_10970
glucose-1-phosphate thymidylyltransferase
Accession:
AWG06979
Location: 2085739-2086617
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
B6V57_10965
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AWG06978
Location: 2085186-2085734
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 247
Sequence coverage: 96 %
E-value: 5e-80
NCBI BlastP on this gene
B6V57_10960
transporter
Accession:
AWG06977
Location: 2083916-2085154
NCBI BlastP on this gene
B6V57_10955
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession:
AWG06976
Location: 2082779-2083906
NCBI BlastP on this gene
B6V57_10950
glycosyl transferase family 2
Accession:
AWG06975
Location: 2081700-2082764
NCBI BlastP on this gene
B6V57_10945
hypothetical protein
Accession:
AWG06974
Location: 2080644-2081648
NCBI BlastP on this gene
B6V57_10940
glycosyl transferase
Accession:
AWG06973
Location: 2079683-2080642
NCBI BlastP on this gene
B6V57_10935
glycosyl transferase
Accession:
AWG06972
Location: 2078609-2079673
NCBI BlastP on this gene
B6V57_10930
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP019903
: Escherichia coli strain MDR_56 chromosome Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
lipopolysaccharide biosynthesis protein
Accession:
AQU97739
Location: 4104481-4105959
NCBI BlastP on this gene
B1200_22365
hypothetical protein
Accession:
AQU98725
Location: 4104292-4104495
NCBI BlastP on this gene
B1200_22360
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AQU97738
Location: 4102925-4104205
NCBI BlastP on this gene
B1200_22355
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AQU97737
Location: 4101708-4102928
NCBI BlastP on this gene
B1200_22350
colanic acid biosynthesis protein WcaM
Accession:
AQU97736
Location: 4100303-4101697
NCBI BlastP on this gene
B1200_22345
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AQU97735
Location: 4099235-4100128
NCBI BlastP on this gene
B1200_22340
hypothetical protein
Accession:
AQU97734
Location: 4098935-4099198
NCBI BlastP on this gene
B1200_22335
dTDP-glucose 4,6-dehydratase
Accession:
AQU97733
Location: 4097777-4098862
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 614
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
B1200_22330
NAD(P)-dependent oxidoreductase
Accession:
AQU97732
Location: 4096878-4097777
BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
B1200_22325
glucose-1-phosphate thymidylyltransferase
Accession:
AQU97731
Location: 4095942-4096820
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
B1200_22320
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AQU97730
Location: 4095392-4095937
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 3e-76
NCBI BlastP on this gene
B1200_22315
hypothetical protein
Accession:
AQU97729
Location: 4094141-4095388
NCBI BlastP on this gene
B1200_22310
hypothetical protein
Accession:
AQU97728
Location: 4093359-4094141
NCBI BlastP on this gene
B1200_22305
hypothetical protein
Accession:
AQU97727
Location: 4092385-4093341
NCBI BlastP on this gene
B1200_22300
hypothetical protein
Accession:
AQU97726
Location: 4091228-4092385
NCBI BlastP on this gene
B1200_22295
hypothetical protein
Accession:
AQU97725
Location: 4089975-4091273
NCBI BlastP on this gene
B1200_22290
hypothetical protein
Accession:
AQU97724
Location: 4088998-4089981
NCBI BlastP on this gene
B1200_22285
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP019029
: Escherichia coli strain Ecol_881. Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
lipopolysaccharide biosynthesis protein
Accession:
AQV70690
Location: 5214435-5215913
NCBI BlastP on this gene
BE930_29500
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AQV70964
Location: 5215986-5217266
NCBI BlastP on this gene
BE930_29505
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AQV70691
Location: 5217263-5218483
NCBI BlastP on this gene
BE930_29510
colanic acid biosynthesis protein WcaM
Accession:
AQV70692
Location: 5218494-5219888
NCBI BlastP on this gene
BE930_29515
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AQV70693
Location: 5220063-5220956
NCBI BlastP on this gene
BE930_29520
hypothetical protein
Accession:
AQV70694
Location: 5221011-5221256
NCBI BlastP on this gene
BE930_29525
dTDP-glucose 4,6-dehydratase
Accession:
AQV70695
Location: 5221329-5222414
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
BE930_29530
NAD(P)-dependent oxidoreductase
Accession:
AQV70696
Location: 5222414-5223313
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
BE930_29535
glucose-1-phosphate thymidylyltransferase
Accession:
AQV70697
Location: 5223371-5224249
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
BE930_29540
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AQV70698
Location: 5224254-5224802
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 247
Sequence coverage: 96 %
E-value: 5e-80
NCBI BlastP on this gene
BE930_29545
transporter
Accession:
AQV70699
Location: 5224834-5226072
NCBI BlastP on this gene
BE930_29550
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession:
AQV70700
Location: 5226082-5227209
NCBI BlastP on this gene
BE930_29555
glycosyl transferase family 2
Accession:
AQV70701
Location: 5227224-5228288
NCBI BlastP on this gene
BE930_29560
hypothetical protein
Accession:
AQV70702
Location: 5228340-5229344
NCBI BlastP on this gene
BE930_29565
glycosyl transferase
Accession:
AQV70703
Location: 5229346-5230305
NCBI BlastP on this gene
BE930_29570
glycosyl transferase
Accession:
AQV70704
Location: 5230315-5231379
NCBI BlastP on this gene
BE930_29575
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP015834
: Escherichia coli strain MS6198 Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
Lipopolysaccharide biosynthesis protein WzxC
Accession:
AOM70480
Location: 2340736-2342214
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis protein
Accession:
AOM70479
Location: 2339383-2340735
NCBI BlastP on this gene
MS6198_23640
GDP-mannose-dependent
Accession:
AOM70478
Location: 2338166-2339386
NCBI BlastP on this gene
pimB
putative colanic acid biosynthesis protein
Accession:
AOM70477
Location: 2336761-2338155
NCBI BlastP on this gene
MS6198_23610
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AOM70476
Location: 2335693-2336586
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
AOM70475
Location: 2334235-2335320
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AOM70474
Location: 2333336-2334235
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
Glucose-1-phosphate thymidylyltransferase 1
Accession:
AOM70473
Location: 2332400-2333278
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA1
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AOM70472
Location: 2331847-2332395
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 247
Sequence coverage: 96 %
E-value: 5e-80
NCBI BlastP on this gene
rfbC
Putative O-antigen transporter
Accession:
AOM70471
Location: 2330577-2331815
NCBI BlastP on this gene
rfbX
UDP-N-acetylglucosamine 2-epimerase
Accession:
AOM70470
Location: 2329440-2330567
NCBI BlastP on this gene
wecB_3
hypothetical protein
Accession:
AOM70469
Location: 2328361-2329371
NCBI BlastP on this gene
MS6198_23510
hypothetical protein
Accession:
AOM70468
Location: 2327305-2328309
NCBI BlastP on this gene
MS6198_23500
Putative glycosyltransferase EpsE
Accession:
AOM70467
Location: 2326344-2327303
NCBI BlastP on this gene
epsE_3
Glycosyl transferases group 1
Accession:
AOM70466
Location: 2325270-2326334
NCBI BlastP on this gene
MS6198_23480
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP012781
: Escherichia coli strain A18 genome. Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid transporter
Accession:
AYL86319
Location: 2113202-2114680
NCBI BlastP on this gene
AOY71_10405
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AYL86318
Location: 2111646-2112926
NCBI BlastP on this gene
AOY71_10400
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AYL86317
Location: 2110429-2111649
NCBI BlastP on this gene
AOY71_10395
colanic acid biosynthesis protein WcaM
Accession:
AYL86316
Location: 2109024-2110418
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AYL86315
Location: 2107956-2108849
NCBI BlastP on this gene
AOY71_10385
dTDP-glucose 4,6-dehydratase
Accession:
AYL86314
Location: 2106499-2107584
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 613
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AOY71_10380
dTDP-4-dehydrorhamnose reductase
Accession:
AYL86313
Location: 2105600-2106499
BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AOY71_10375
glucose-1-phosphate thymidylyltransferase
Accession:
AYL86312
Location: 2104664-2105542
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 594
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AOY71_10370
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AYL86311
Location: 2104123-2104659
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 3e-78
NCBI BlastP on this gene
AOY71_10365
hypothetical protein
Accession:
AYL86310
Location: 2103263-2104099
NCBI BlastP on this gene
AOY71_10360
hypothetical protein
Accession:
AYL86309
Location: 2101699-2103153
NCBI BlastP on this gene
AOY71_10355
hypothetical protein
Accession:
AYL86308
Location: 2100777-2101676
NCBI BlastP on this gene
AOY71_10350
hypothetical protein
Accession:
AYL86307
Location: 2100472-2100744
NCBI BlastP on this gene
AOY71_10345
hypothetical protein
Accession:
AYL86306
Location: 2098707-2099549
NCBI BlastP on this gene
AOY71_10340
hypothetical protein
Accession:
AYL86305
Location: 2097590-2098714
NCBI BlastP on this gene
AOY71_10335
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP012635
: Escherichia coli strain SF-088 Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid transporter
Accession:
ALD39490
Location: 1836423-1837901
NCBI BlastP on this gene
AN203_08860
colanic acid biosynthesis protein
Accession:
ALD39491
Location: 1838063-1839343
NCBI BlastP on this gene
AN203_08865
colanic acid biosynthesis protein
Accession:
ALD39492
Location: 1839340-1840560
NCBI BlastP on this gene
AN203_08870
colanic acid biosynthesis protein
Accession:
ALD39493
Location: 1840571-1841965
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
ALD39494
Location: 1842140-1843033
NCBI BlastP on this gene
AN203_08880
dTDP-glucose 4,6-dehydratase
Accession:
ALD39495
Location: 1843406-1844491
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AN203_08885
dTDP-4-dehydrorhamnose reductase
Accession:
ALD39496
Location: 1844491-1845390
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AN203_08890
glucose-1-phosphate thymidylyltransferase
Accession:
ALD39497
Location: 1845448-1846326
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AN203_08895
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ALD39498
Location: 1846331-1846879
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 247
Sequence coverage: 96 %
E-value: 5e-80
NCBI BlastP on this gene
AN203_08900
transporter
Accession:
ALD39499
Location: 1846911-1848149
NCBI BlastP on this gene
AN203_08905
UDP-N-acetylglucosamine 2-epimerase
Accession:
ALD39500
Location: 1848159-1849286
NCBI BlastP on this gene
AN203_08910
glycosyl transferase family 2
Accession:
ALD39501
Location: 1849301-1850365
NCBI BlastP on this gene
AN203_08915
hypothetical protein
Accession:
ALD39502
Location: 1850417-1851421
NCBI BlastP on this gene
AN203_08920
glycosyl transferase
Accession:
ALD39503
Location: 1851423-1852382
NCBI BlastP on this gene
AN203_08925
glycosyl transferase
Accession:
ALD39504
Location: 1852392-1853456
NCBI BlastP on this gene
AN203_08930
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP012633
: Escherichia coli strain SF-166 Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid transporter
Accession:
ALD34779
Location: 1874194-1875672
NCBI BlastP on this gene
AN204_09145
colanic acid biosynthesis protein
Accession:
ALD34780
Location: 1875834-1877114
NCBI BlastP on this gene
AN204_09150
colanic acid biosynthesis protein
Accession:
ALD34781
Location: 1877111-1878331
NCBI BlastP on this gene
AN204_09155
colanic acid biosynthesis protein
Accession:
ALD34782
Location: 1878342-1879736
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
ALD34783
Location: 1879911-1880804
NCBI BlastP on this gene
AN204_09165
dTDP-glucose 4,6-dehydratase
Accession:
ALD34784
Location: 1881177-1882262
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AN204_09170
dTDP-4-dehydrorhamnose reductase
Accession:
ALD34785
Location: 1882262-1883161
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AN204_09175
glucose-1-phosphate thymidylyltransferase
Accession:
ALD34786
Location: 1883219-1884097
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AN204_09180
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ALD34787
Location: 1884102-1884650
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 247
Sequence coverage: 96 %
E-value: 5e-80
NCBI BlastP on this gene
AN204_09185
transporter
Accession:
ALD34788
Location: 1884682-1885920
NCBI BlastP on this gene
AN204_09190
UDP-N-acetylglucosamine 2-epimerase
Accession:
ALD34789
Location: 1885930-1887057
NCBI BlastP on this gene
AN204_09195
glycosyl transferase family 2
Accession:
ALD34790
Location: 1887072-1888136
NCBI BlastP on this gene
AN204_09200
hypothetical protein
Accession:
ALD34791
Location: 1888188-1889192
NCBI BlastP on this gene
AN204_09205
glycosyl transferase
Accession:
ALD34792
Location: 1889194-1890153
NCBI BlastP on this gene
AN204_09210
glycosyl transferase
Accession:
ALD34793
Location: 1890163-1891227
NCBI BlastP on this gene
AN204_09215
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP009859
: Escherichia coli strain ECONIH1 Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
AIX63923
Location: 2407487-2408965
NCBI BlastP on this gene
ECONIH1_12085
colanic acid biosynthesis protein
Accession:
AIX66638
Location: 2406134-2407414
NCBI BlastP on this gene
ECONIH1_12080
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AIX63922
Location: 2404917-2406137
NCBI BlastP on this gene
ECONIH1_12075
colanic acid biosynthesis protein
Accession:
AIX63921
Location: 2403512-2404906
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AIX63920
Location: 2402444-2403337
NCBI BlastP on this gene
ECONIH1_12065
dTDP-glucose 4,6-dehydratase
Accession:
AIX63919
Location: 2400986-2402071
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
ECONIH1_12060
dTDP-4-dehydrorhamnose reductase
Accession:
AIX63918
Location: 2400087-2400986
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
ECONIH1_12055
glucose-1-phosphate thymidylyltransferase
Accession:
AIX63917
Location: 2399151-2400029
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
ECONIH1_12050
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AIX63916
Location: 2398598-2399146
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 247
Sequence coverage: 96 %
E-value: 5e-80
NCBI BlastP on this gene
ECONIH1_12045
transporter
Accession:
AIX63915
Location: 2397328-2398566
NCBI BlastP on this gene
ECONIH1_12040
UDP-N-acetylglucosamine 2-epimerase
Accession:
AIX63914
Location: 2396191-2397318
NCBI BlastP on this gene
ECONIH1_12035
glycosyl transferase family 2
Accession:
AIX66637
Location: 2395112-2396122
NCBI BlastP on this gene
ECONIH1_12030
hypothetical protein
Accession:
AIX63913
Location: 2394056-2395060
NCBI BlastP on this gene
ECONIH1_12025
glycosyl transferase
Accession:
AIX63912
Location: 2393095-2394054
NCBI BlastP on this gene
ECONIH1_12020
glycosyl transferase
Accession:
AIX63911
Location: 2392021-2393085
NCBI BlastP on this gene
ECONIH1_12015
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP000468
: Escherichia coli APEC O1 Total score: 5.5 Cumulative Blast bit score: 2044
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
lipopolysaccharide biosynthesis protein
Accession:
ABJ01441
Location: 2205727-2207205
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis protein
Accession:
ABJ01440
Location: 2204285-2205565
NCBI BlastP on this gene
wcaK
putative colanic acid biosynthesis glycosyl transferase
Accession:
ABJ01439
Location: 2203068-2204288
NCBI BlastP on this gene
wcaL
putative colanic acid biosynthesis protein
Accession:
ABJ01438
Location: 2201663-2203057
NCBI BlastP on this gene
wcaM
putative UTP--glucose-1-phosphate uridylyltransferase
Accession:
ABJ01437
Location: 2200595-2201500
NCBI BlastP on this gene
galF
RfbB, subunit of dTDP-glucose 4,6-dehydratase
Accession:
ABJ01436
Location: 2199137-2200222
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession:
ABJ01435
Location: 2198238-2199137
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
ABJ01434
Location: 2197302-2198180
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
putative dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ABJ01433
Location: 2196749-2197297
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 247
Sequence coverage: 96 %
E-value: 5e-80
NCBI BlastP on this gene
rmlC
putative O-antigen transporter
Accession:
ABJ01432
Location: 2195479-2196705
NCBI BlastP on this gene
APECO1_1127
Query: Escherichia coli strain O146 O antigen gene cluster, complete
MN172355
: Escherichia coli strain 16-02258 O-antigen biosynthesis gene cluster Total score: 5.5 Cumulative Blast bit score: 2043
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
GalF
Accession:
QEE84071
Location: 82-975
NCBI BlastP on this gene
galF
RmlB
Accession:
QEE84072
Location: 1347-2432
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 610
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
RmlD
Accession:
QEE84073
Location: 2432-3331
BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 600
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
RmlA
Accession:
QEE84074
Location: 3389-4264
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 594
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QEE84075
Location: 4272-4823
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 239
Sequence coverage: 100 %
E-value: 8e-77
NCBI BlastP on this gene
QEE84075
lipopolysaccharide biosynthesis protein
Accession:
QEE84076
Location: 4834-6243
NCBI BlastP on this gene
wzx
glycosyltransferase
Accession:
QEE84077
Location: 6268-6990
NCBI BlastP on this gene
QEE84077
oligosaccharide repeat unit polymerase
Accession:
QEE84078
Location: 6987-8309
NCBI BlastP on this gene
wzy
glycosyltransferase family 2 protein
Accession:
QEE84079
Location: 8302-9180
NCBI BlastP on this gene
QEE84079
glycosyltransferase
Accession:
QEE84080
Location: 9196-10359
NCBI BlastP on this gene
QEE84080
colanic acid biosynthesis acetyltransferase WcaF
Accession:
QEE84081
Location: 10367-10897
NCBI BlastP on this gene
QEE84081
Gmd
Accession:
QEE84082
Location: 10897-12015
NCBI BlastP on this gene
gmd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KJ778793
: Escherichia coli strain P 7a serotype O20:K17:H- O-antigen gene cluster Total score: 5.5 Cumulative Blast bit score: 2043
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-glucose 4,6-dehydratase
Accession:
AIG62690
Location: 108-1193
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 610
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
AIG62689
Location: 1193-2092
BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 600
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
AIG62688
Location: 2150-3025
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 594
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AIG62687
Location: 3033-3584
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 239
Sequence coverage: 100 %
E-value: 8e-77
NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession:
AIG62686
Location: 3595-5004
NCBI BlastP on this gene
wzx
PGL/p-HBAD biosynthesis
Accession:
AIG62685
Location: 5029-5751
NCBI BlastP on this gene
AIG62685
O-antigen polymerase
Accession:
AIG62684
Location: 5748-7070
NCBI BlastP on this gene
wzy
N-glycosyltransferase
Accession:
AIG62683
Location: 7063-7941
NCBI BlastP on this gene
AIG62683
D-inositol 3-phosphate glycosyltransferase
Accession:
AIG62682
Location: 7957-9120
NCBI BlastP on this gene
mshA
maltose O-acetyltransferase
Accession:
AIG62681
Location: 9128-9658
NCBI BlastP on this gene
maa
GDP-mannose 4,6-dehydratase
Accession:
AIG62680
Location: 9658-10776
NCBI BlastP on this gene
gmd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP000800
: Escherichia coli E24377A Total score: 5.5 Cumulative Blast bit score: 2043
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
polysaccharide biosynthesis protein WzxC
Accession:
ABV18437
Location: 2301603-2303081
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis protein WcaK
Accession:
ABV17797
Location: 2300047-2301327
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyl transferase WcaL
Accession:
ABV20652
Location: 2298830-2300050
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
ABV21119
Location: 2297425-2298819
NCBI BlastP on this gene
wcaM
regulatory protein GalF
Accession:
ABV20596
Location: 2296357-2297250
NCBI BlastP on this gene
galF
hypothetical protein
Accession:
ABV20943
Location: 2296214-2296309
NCBI BlastP on this gene
EcE24377A_2333
dTDP-glucose 4,6-dehydratase
Accession:
ABV16636
Location: 2294900-2295985
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 614
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB2
dTDP-4-dehydrorhamnose reductase
Accession:
ABV20633
Location: 2294001-2294900
BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase
Accession:
ABV19187
Location: 2293065-2293943
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA1
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ABV19799
Location: 2292512-2293060
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 241
Sequence coverage: 96 %
E-value: 2e-77
NCBI BlastP on this gene
rfbC
glycosyl transferase, group 2 family domain protein
Accession:
ABV17836
Location: 2291476-2292456
NCBI BlastP on this gene
EcE24377A_2328
glycosyl transferase, group 2 family protein
Accession:
ABV18525
Location: 2290736-2291479
NCBI BlastP on this gene
EcE24377A_2327
putative membrane protein
Accession:
ABV16490
Location: 2289707-2290720
NCBI BlastP on this gene
EcE24377A_2326
VI polysaccharide biosynthesis protein
Accession:
ABV17228
Location: 2288314-2289588
NCBI BlastP on this gene
vipA
Vi polysaccharide biosynthesis protein
Accession:
ABV17163
Location: 2287268-2288299
NCBI BlastP on this gene
vipB
hypothetical protein
Accession:
ABV17854
Location: 2286419-2287171
NCBI BlastP on this gene
EcE24377A_2323
putative membrane protein
Accession:
ABV20694
Location: 2285178-2286419
NCBI BlastP on this gene
EcE24377A_2322
Query: Escherichia coli strain O146 O antigen gene cluster, complete
EU296406
: Shigella boydii type 12 O-antigen gene cluster Total score: 5.5 Cumulative Blast bit score: 2042
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession:
ACD37020
Location: 558-1643
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 610
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
RmlD
Accession:
ACD37021
Location: 1643-2542
BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
RmlA
Accession:
ACD37022
Location: 3755-4633
BlastP hit with rmlA
Percentage identity: 96 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
RmlC
Accession:
ACD37023
Location: 4638-5177
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 243
Sequence coverage: 99 %
E-value: 2e-78
NCBI BlastP on this gene
rmlC
WfdW
Accession:
ACD37024
Location: 5179-6270
NCBI BlastP on this gene
wfdW
Wzx
Accession:
ACD37025
Location: 6246-7580
NCBI BlastP on this gene
wzx
Wzy
Accession:
ACD37026
Location: 7561-8700
NCBI BlastP on this gene
wzy
WfdX
Accession:
ACD37027
Location: 8717-9538
NCBI BlastP on this gene
wfdX
WfdY
Accession:
ACD37028
Location: 9535-10653
NCBI BlastP on this gene
wfdY
WfdZ
Accession:
ACD37029
Location: 10650-11471
NCBI BlastP on this gene
wfdZ
Query: Escherichia coli strain O146 O antigen gene cluster, complete
EU294174
: Shigella dysenteriae O antigen gene cluster Total score: 5.5 Cumulative Blast bit score: 2042
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession:
ACA24859
Location: 1137-2222
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
RmlD
Accession:
ACA24860
Location: 2222-3121
BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
RmlA
Accession:
ACA24861
Location: 3179-4054
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 594
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
RmlC
Accession:
ACA24862
Location: 4062-4604
BlastP hit with rmlC
Percentage identity: 65 %
BlastP bit score: 240
Sequence coverage: 99 %
E-value: 2e-77
NCBI BlastP on this gene
rmlC
Wzx
Accession:
ACA24863
Location: 4728-5915
NCBI BlastP on this gene
wzx
WfeZ
Accession:
ACA24864
Location: 5905-6513
NCBI BlastP on this gene
wfeZ
WffA
Accession:
ACA24865
Location: 6500-7708
NCBI BlastP on this gene
wffA
WffB
Accession:
ACA24866
Location: 7683-8864
NCBI BlastP on this gene
wffB
WffC
Accession:
ACA24867
Location: 8977-9798
NCBI BlastP on this gene
wffC
Wzy
Accession:
ACA24868
Location: 9803-11134
NCBI BlastP on this gene
wzy
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP019213
: Escherichia coli strain WCHEC050613 chromosome Total score: 5.5 Cumulative Blast bit score: 2042
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Accession:
APW91190
Location: 1754706-1756184
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
APW91188
Location: 1756748-1758028
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
APW91187
Location: 1758025-1759245
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
APW91186
Location: 1759256-1760650
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
APW91185
Location: 1760825-1761718
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
APW91184
Location: 1762092-1763177
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
APW91183
Location: 1763177-1764076
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
APW91182
Location: 1764134-1765012
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
APW91181
Location: 1765017-1765562
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 6e-78
NCBI BlastP on this gene
rfbC
O149 family O-antigen flippase
Accession:
APW91180
Location: 1765552-1766736
NCBI BlastP on this gene
DBA32_08960
polysaccharide pyruvyl transferase family protein
Accession:
APW91179
Location: 1766720-1767556
NCBI BlastP on this gene
DBA32_08965
O-antigen polymerase
Accession:
APW91178
Location: 1767587-1768651
NCBI BlastP on this gene
DBA32_08970
glycosyltransferase family 2 protein
Accession:
APW91177
Location: 1768648-1769469
NCBI BlastP on this gene
DBA32_08975
glycosyltransferase family 1 protein
Accession:
APW91176
Location: 1769511-1770593
NCBI BlastP on this gene
DBA32_08980
NADP-dependent phosphogluconate dehydrogenase
Accession:
APW91175
Location: 1770677-1772083
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
GU299791
: Escherichia coli strain G1632 O antigen gene cluster Total score: 5.5 Cumulative Blast bit score: 2041
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession:
ADC54922
Location: 108-1193
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
RmlD
Accession:
ADC54923
Location: 1193-2092
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
RmlA
Accession:
ADC54924
Location: 2150-3028
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
RmlC
Accession:
ADC54925
Location: 3033-3581
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 246
Sequence coverage: 96 %
E-value: 1e-79
NCBI BlastP on this gene
rmlC
Wzx
Accession:
ADC54926
Location: 3625-4851
NCBI BlastP on this gene
wzx
MnaA
Accession:
ADC54927
Location: 4861-5988
NCBI BlastP on this gene
mnaA
WekM
Accession:
ADC54928
Location: 6003-7067
NCBI BlastP on this gene
wekM
Wzy
Accession:
ADC54929
Location: 7119-8123
NCBI BlastP on this gene
wzy
WekN
Accession:
ADC54930
Location: 8125-9084
NCBI BlastP on this gene
wekN
WekO
Accession:
ADC54931
Location: 9094-10158
NCBI BlastP on this gene
wekO
Query: Escherichia coli strain O146 O antigen gene cluster, complete
DQ868764
: Escherichia coli serogroup O149 O-antigen gene cluster Total score: 5.5 Cumulative Blast bit score: 2041
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession:
ABI98960
Location: 107-1192
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
RmlD
Accession:
ABI98961
Location: 1192-2091
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
RmlA
Accession:
ABI98962
Location: 2149-3027
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
RmlC
Accession:
ABI98963
Location: 3032-3577
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 6e-78
NCBI BlastP on this gene
rmlC
Wzx
Accession:
ABI98964
Location: 3567-4751
NCBI BlastP on this gene
wzx
WbuT
Accession:
ABI98965
Location: 4735-5571
NCBI BlastP on this gene
wbuT
Wzy
Accession:
ABI98966
Location: 5602-6666
NCBI BlastP on this gene
wzy
WbuU
Accession:
ABI98967
Location: 6663-7484
NCBI BlastP on this gene
wbuU
WbuV
Accession:
ABI98968
Location: 7526-8608
NCBI BlastP on this gene
wbuV
Query: Escherichia coli strain O146 O antigen gene cluster, complete
DQ091854
: Escherichia coli serotype O149:H10 O-antigen gene cluster Total score: 5.5 Cumulative Blast bit score: 2041
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
putative dTDP-glucose 4,6 dehydratase
Accession:
AAZ65831
Location: 3177-4262
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AAZ65831
putative dTDP-4-dyhydrorhamnose reductase
Accession:
AAZ65832
Location: 4262-5161
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AAZ65832
putative protein
Accession:
AAZ65833
Location: 5219-6097
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AAZ65833
putative protein
Accession:
AAZ65834
Location: 6102-6647
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 6e-78
NCBI BlastP on this gene
AAZ65834
putative protein
Accession:
AAZ65835
Location: 6637-7821
NCBI BlastP on this gene
AAZ65835
putative protein
Accession:
AAZ65836
Location: 7805-8641
NCBI BlastP on this gene
AAZ65836
putative protein
Accession:
AAZ65837
Location: 8672-9736
NCBI BlastP on this gene
AAZ65837
putative protein
Accession:
AAZ65838
Location: 9733-10554
NCBI BlastP on this gene
AAZ65838
putative protein
Accession:
AAZ65839
Location: 10596-11678
NCBI BlastP on this gene
AAZ65839
6-phosphogluconate dehydrogenase
Accession:
AAZ65840
Location: 11762-13201
NCBI BlastP on this gene
AAZ65840
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP002729
: Escherichia coli UMNK88 Total score: 5.5 Cumulative Blast bit score: 2041
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
lipopolysaccharide biosynthesis protein WzxC
Accession:
AEE57161
Location: 2469759-2471237
NCBI BlastP on this gene
UMNK88_2591
amylovoran biosynthesis protein AmsJ
Accession:
AEE57160
Location: 2468311-2469591
NCBI BlastP on this gene
UMNK88_2590
putative colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AEE57159
Location: 2467094-2468314
NCBI BlastP on this gene
UMNK88_2589
colanic acid biosynthesis protein WcaM
Accession:
AEE57158
Location: 2465689-2467083
NCBI BlastP on this gene
UMNK88_2588
regulatory protein GalF
Accession:
AEE57157
Location: 2464621-2465514
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase RfbB
Accession:
AEE57156
Location: 2463164-2464249
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase RfbD
Accession:
AEE57155
Location: 2462265-2463164
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AEE57154
Location: 2461329-2462207
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase RfbC
Accession:
AEE57153
Location: 2460779-2461324
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 6e-78
NCBI BlastP on this gene
rfbC
conserved hypothetical protein
Accession:
AEE57152
Location: 2459606-2460349
NCBI BlastP on this gene
UMNK88_2582
conserved hypothetical protein
Accession:
AEE57151
Location: 2458786-2459622
NCBI BlastP on this gene
UMNK88_2581
conserved hypothetical protein
Accession:
AEE57150
Location: 2457691-2458755
NCBI BlastP on this gene
UMNK88_2580
conserved hypothetical protein
Accession:
AEE57149
Location: 2456999-2457694
NCBI BlastP on this gene
UMNK88_2579
conserved hypothetical protein
Accession:
AEE57148
Location: 2455750-2456832
NCBI BlastP on this gene
UMNK88_2578
6-phosphogluconate dehydrogenase, decarboxylating
Accession:
AEE57147
Location: 2454260-2455666
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
HG428755
: Escherichia coli PMV-1 main chromosome Total score: 5.5 Cumulative Blast bit score: 2040
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
Lipopolysaccharide biosynthesis protein wzxC
Accession:
CDH65618
Location: 2259054-2260532
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis protein
Accession:
CDH65617
Location: 2257111-2258391
NCBI BlastP on this gene
ECOPMV1_02200
GDP-mannose-dependent
Accession:
CDH65616
Location: 2255894-2257114
NCBI BlastP on this gene
pimB
putative colanic acid biosynthesis protein
Accession:
CDH65615
Location: 2254489-2255883
NCBI BlastP on this gene
ECOPMV1_02198
UTP--glucose-1-phosphate uridylyltransferase
Accession:
CDH65614
Location: 2253421-2254314
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
CDH65613
Location: 2251963-2253048
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 609
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
CDH65612
Location: 2251064-2251963
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
Glucose-1-phosphate thymidylyltransferase 1
Accession:
CDH65611
Location: 2250131-2251006
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 590
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
rmlA1
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
CDH65610
Location: 2249566-2250123
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 236
Sequence coverage: 99 %
E-value: 2e-75
NCBI BlastP on this gene
rfbC
Polysaccharide biosynthesis protein
Accession:
CDH65609
Location: 2248322-2249569
NCBI BlastP on this gene
ECOPMV1_02191
hypothetical protein
Accession:
CDH65608
Location: 2247618-2248265
NCBI BlastP on this gene
ECOPMV1_02190
hypothetical protein
Accession:
CDH65607
Location: 2247076-2247567
NCBI BlastP on this gene
ECOPMV1_02189
Spore coat polysaccharide biosynthesis protein spsA
Accession:
CDH65606
Location: 2246159-2247127
NCBI BlastP on this gene
spsA
Chondroitin polymerase
Accession:
CDH65605
Location: 2245374-2246162
NCBI BlastP on this gene
kfoC_1
Capsular glucan synthase
Accession:
CDH65604
Location: 2244271-2245377
NCBI BlastP on this gene
glgA_1
Glycogen synthase
Accession:
CDH65603
Location: 2242826-2243929
NCBI BlastP on this gene
ECOPMV1_02185
Query: Escherichia coli strain O146 O antigen gene cluster, complete
EU294170
: Escherichia coli serotype O152 O antigen gene cluster Total score: 5.5 Cumulative Blast bit score: 2040
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession:
ACA24814
Location: 1177-2262
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
RmlD
Accession:
ACA24815
Location: 2262-3161
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 603
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
RmlA
Accession:
ACA24816
Location: 3219-4097
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
RmlC
Accession:
ACA24817
Location: 4102-4650
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 239
Sequence coverage: 96 %
E-value: 5e-77
NCBI BlastP on this gene
rmlC
WfgB
Accession:
ACA24818
Location: 4666-5703
NCBI BlastP on this gene
wfgB
Wzx
Accession:
ACA24819
Location: 5703-6914
NCBI BlastP on this gene
wzx
WfgC
Accession:
ACA24820
Location: 6917-7909
NCBI BlastP on this gene
wfgC
Wzy
Accession:
ACA24821
Location: 7922-8995
NCBI BlastP on this gene
wzy
WfgD
Accession:
ACA24822
Location: 9000-9761
NCBI BlastP on this gene
wfgD
WfgE
Accession:
ACA24823
Location: 9758-10828
NCBI BlastP on this gene
wfgE
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP043747
: Escherichia coli strain CVM N16EC0140 chromosome Total score: 5.5 Cumulative Blast bit score: 2040
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Accession:
QEP69753
Location: 1868343-1869821
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QEP69754
Location: 1870097-1871377
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QEP69755
Location: 1871374-1872594
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QEP69756
Location: 1872605-1873999
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QEP69757
Location: 1874174-1875067
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QEP69758
Location: 1875440-1876525
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QEP69759
Location: 1876525-1877424
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 603
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QEP69760
Location: 1877482-1878360
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QEP69761
Location: 1878365-1878913
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 239
Sequence coverage: 96 %
E-value: 5e-77
NCBI BlastP on this gene
rfbC
hypothetical protein
Accession:
QEP69762
Location: 1878929-1879966
NCBI BlastP on this gene
F1L20_09130
flippase
Accession:
QEP69763
Location: 1879966-1881177
NCBI BlastP on this gene
F1L20_09135
glycosyl transferase
Accession:
QEP69764
Location: 1881180-1882172
NCBI BlastP on this gene
F1L20_09140
EpsG family protein
Accession:
QEP69765
Location: 1882185-1883258
NCBI BlastP on this gene
F1L20_09145
glycosyltransferase
Accession:
QEP69766
Location: 1883263-1884024
NCBI BlastP on this gene
F1L20_09150
glycosyltransferase family 4 protein
Accession:
QEP69767
Location: 1884021-1885091
NCBI BlastP on this gene
F1L20_09155
NADP-dependent phosphogluconate dehydrogenase
Accession:
QEP69768
Location: 1885199-1886605
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP041535
: Escherichia coli strain 95 chromosome. Total score: 5.5 Cumulative Blast bit score: 2040
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Accession:
QDM89498
Location: 1448510-1449988
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QDM89497
Location: 1446567-1447847
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QDM89496
Location: 1445350-1446570
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QDM89495
Location: 1443945-1445339
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QDM89494
Location: 1442877-1443770
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QDM89493
Location: 1441419-1442504
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 609
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QDM89492
Location: 1440520-1441419
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QDM89491
Location: 1439587-1440462
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 590
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QDM89490
Location: 1439022-1439579
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 236
Sequence coverage: 99 %
E-value: 2e-75
NCBI BlastP on this gene
rfbC
O18ab/O18ac family O-antigen flippase
Accession:
QDM89489
Location: 1437778-1439025
NCBI BlastP on this gene
wzx
O18ab/O18ac family O-antigen polymerase
Accession:
QDM92841
Location: 1436531-1437676
NCBI BlastP on this gene
wzy
glycosyltransferase family 2 protein
Accession:
QDM89488
Location: 1435614-1436582
NCBI BlastP on this gene
FNJ77_07485
glycosyltransferase
Accession:
QDM89487
Location: 1434829-1435617
NCBI BlastP on this gene
FNJ77_07480
glycosyltransferase
Accession:
QDM89486
Location: 1433726-1434832
NCBI BlastP on this gene
FNJ77_07475
glycosyltransferase family 4 protein
Accession:
QDM89485
Location: 1432281-1433384
NCBI BlastP on this gene
FNJ77_07470
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP028320
: Escherichia coli O18:H1 strain CFSAN067215 chromosome Total score: 5.5 Cumulative Blast bit score: 2040
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
QBZ08860
Location: 3275054-3276532
NCBI BlastP on this gene
C7X15_17275
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QBZ08859
Location: 3273111-3274391
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QBZ08858
Location: 3271894-3273114
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QBZ08857
Location: 3270489-3271883
NCBI BlastP on this gene
C7X15_17260
UTP--glucose-1-phosphate uridylyltransferase
Accession:
QBZ08856
Location: 3269421-3270314
NCBI BlastP on this gene
C7X15_17255
hypothetical protein
Accession:
QBZ08855
Location: 3269121-3269366
NCBI BlastP on this gene
C7X15_17250
dTDP-glucose 4,6-dehydratase
Accession:
QBZ08854
Location: 3267963-3269048
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 609
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QBZ08853
Location: 3267064-3267963
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
C7X15_17240
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QBZ08852
Location: 3266131-3267006
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 590
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
C7X15_17235
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QBZ08851
Location: 3265566-3266123
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 236
Sequence coverage: 99 %
E-value: 2e-75
NCBI BlastP on this gene
rfbC
O18ab/O18ac family O-antigen flippase
Accession:
QBZ08850
Location: 3264322-3265569
NCBI BlastP on this gene
wzx
O18ab/O18ac family O-antigen polymerase
Accession:
QBZ10555
Location: 3263075-3264220
NCBI BlastP on this gene
wzy
glycosyltransferase family 2 protein
Accession:
QBZ08849
Location: 3262158-3263126
NCBI BlastP on this gene
C7X15_17215
glycosyltransferase family 2 protein
Accession:
QBZ08848
Location: 3261373-3262161
NCBI BlastP on this gene
C7X15_17210
glycosyl transferase family 1
Accession:
QBZ08847
Location: 3260270-3261376
NCBI BlastP on this gene
C7X15_17205
glycosyltransferase family 1 protein
Accession:
QBZ08846
Location: 3258825-3259928
NCBI BlastP on this gene
C7X15_17200
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP019777
: Escherichia coli NU14 chromosome Total score: 5.5 Cumulative Blast bit score: 2040
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
lipopolysaccharide biosynthesis protein
Accession:
AQX97264
Location: 2267008-2268486
NCBI BlastP on this gene
B0908_11870
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AQX97263
Location: 2265065-2266345
NCBI BlastP on this gene
B0908_11865
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AQX97262
Location: 2263848-2265068
NCBI BlastP on this gene
B0908_11860
colanic acid biosynthesis protein WcaM
Accession:
B0908_11855
Location: 2262444-2263837
NCBI BlastP on this gene
B0908_11855
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AQX97261
Location: 2261376-2262269
NCBI BlastP on this gene
B0908_11850
hypothetical protein
Accession:
AQX97260
Location: 2261076-2261321
NCBI BlastP on this gene
B0908_11845
dTDP-glucose 4,6-dehydratase
Accession:
AQX97259
Location: 2259918-2261003
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 609
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
B0908_11840
NAD(P)-dependent oxidoreductase
Accession:
AQX97258
Location: 2259019-2259918
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
B0908_11835
glucose-1-phosphate thymidylyltransferase
Accession:
AQX97257
Location: 2258086-2258961
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 590
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
B0908_11830
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AQX97256
Location: 2257521-2258078
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 236
Sequence coverage: 99 %
E-value: 2e-75
NCBI BlastP on this gene
B0908_11825
polysaccharide biosynthesis protein
Accession:
AQX97255
Location: 2256277-2257524
NCBI BlastP on this gene
B0908_11820
nucleoid-structuring protein H-NS
Accession:
AQX97254
Location: 2255030-2256220
NCBI BlastP on this gene
B0908_11815
rhamnosyl transferase
Accession:
AQX97253
Location: 2254113-2255081
NCBI BlastP on this gene
B0908_11810
glycosyl transferase family A
Accession:
AQX97252
Location: 2253328-2254116
NCBI BlastP on this gene
B0908_11805
glycosyl transferase family 1
Accession:
AQX97251
Location: 2252225-2253331
NCBI BlastP on this gene
B0908_11800
glycosyl transferase family 1
Accession:
AQX97250
Location: 2250780-2251883
NCBI BlastP on this gene
B0908_11795
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP012631
: Escherichia coli strain SF-173 Total score: 5.5 Cumulative Blast bit score: 2040
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid transporter
Accession:
ALD29822
Location: 1850499-1851977
NCBI BlastP on this gene
AN205_09090
colanic acid biosynthesis protein
Accession:
ALD29823
Location: 1852640-1853920
NCBI BlastP on this gene
AN205_09095
colanic acid biosynthesis protein
Accession:
ALD29824
Location: 1853917-1855137
NCBI BlastP on this gene
AN205_09100
colanic acid biosynthesis protein
Accession:
ALD29825
Location: 1855148-1856542
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
ALD29826
Location: 1856717-1857610
NCBI BlastP on this gene
AN205_09110
dTDP-glucose 4,6-dehydratase
Accession:
ALD29827
Location: 1857983-1859068
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 609
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AN205_09115
dTDP-4-dehydrorhamnose reductase
Accession:
ALD29828
Location: 1859068-1859967
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AN205_09120
glucose-1-phosphate thymidylyltransferase
Accession:
ALD29829
Location: 1860025-1860900
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 590
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
AN205_09125
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ALD29830
Location: 1860908-1861465
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 236
Sequence coverage: 99 %
E-value: 2e-75
NCBI BlastP on this gene
AN205_09130
polysaccharide biosynthesis protein
Accession:
ALD29831
Location: 1861462-1862709
NCBI BlastP on this gene
AN205_09135
nucleoid-structuring protein H-NS
Accession:
ALD29832
Location: 1862766-1863956
NCBI BlastP on this gene
AN205_09140
rhamnosyl transferase
Accession:
ALD32810
Location: 1863938-1864873
NCBI BlastP on this gene
AN205_09145
glycosyl transferase family A
Accession:
ALD29833
Location: 1864870-1865658
NCBI BlastP on this gene
AN205_09150
glycosyl transferase family 1
Accession:
ALD29834
Location: 1865655-1866761
NCBI BlastP on this gene
AN205_09155
glycosyl transferase family 1
Accession:
ALD29835
Location: 1867103-1868206
NCBI BlastP on this gene
AN205_09160
Query: Escherichia coli strain O146 O antigen gene cluster, complete
51. :
CP029164
Escherichia coli strain 104 chromosome Total score: 5.5 Cumulative Blast bit score: 2050
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
AWH70340
Location: 2733758-2735236
NCBI BlastP on this gene
DDV95_13840
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AWH70341
Location: 2735608-2736888
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AWH70342
Location: 2736885-2738105
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AWH70343
Location: 2738116-2739510
NCBI BlastP on this gene
DDV95_13855
GalU regulator GalF
Accession:
AWH70344
Location: 2739685-2740578
NCBI BlastP on this gene
DDV95_13860
hypothetical protein
Accession:
AWH70345
Location: 2740615-2740878
NCBI BlastP on this gene
DDV95_13865
dTDP-glucose 4,6-dehydratase
Accession:
AWH70346
Location: 2740951-2742036
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AWH70347
Location: 2742036-2742935
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
DDV95_13875
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AWH70348
Location: 2742993-2743871
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
DDV95_13880
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AWH70349
Location: 2743876-2744445
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 3e-76
NCBI BlastP on this gene
rfbC
hypothetical protein
Accession:
AWH70350
Location: 2744432-2745274
NCBI BlastP on this gene
DDV95_13890
glycosyl transferase
Accession:
AWH70351
Location: 2745271-2746383
NCBI BlastP on this gene
DDV95_13895
O53 family O-antigen flippase
Accession:
AWH70352
Location: 2746364-2747593
NCBI BlastP on this gene
wzx
glycosyltransferase family 1 protein
Accession:
AWH70353
Location: 2747594-2748688
NCBI BlastP on this gene
DDV95_13905
O53 family O-antigen polymerase
Accession:
AWH70354
Location: 2748692-2749984
NCBI BlastP on this gene
wzy
DUF1972 domain-containing protein
Accession:
AWH72501
Location: 2749977-2751032
NCBI BlastP on this gene
DDV95_13915
52. :
CP024127
Escherichia coli strain 14EC001 chromosome Total score: 5.5 Cumulative Blast bit score: 2050
colanic acid exporter
Accession:
AUK21369
Location: 1822591-1824069
NCBI BlastP on this gene
CR534_09475
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AUK21370
Location: 1824141-1825421
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AUK21371
Location: 1825418-1826638
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AUK21372
Location: 1826649-1828043
NCBI BlastP on this gene
CR534_09490
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AUK21373
Location: 1828218-1829111
NCBI BlastP on this gene
CR534_09495
hypothetical protein
Accession:
AUK21374
Location: 1829148-1829411
NCBI BlastP on this gene
CR534_09500
dTDP-glucose 4,6-dehydratase
Accession:
AUK21375
Location: 1829484-1830569
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 613
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AUK21376
Location: 1830569-1831468
BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CR534_09510
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AUK21377
Location: 1831526-1832404
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CR534_09515
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AUK21378
Location: 1832409-1832957
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 237
Sequence coverage: 100 %
E-value: 4e-76
NCBI BlastP on this gene
rfbC
glycosyltransferase WbsX family protein
Accession:
AUK21379
Location: 1832964-1834037
NCBI BlastP on this gene
CR534_09525
hypothetical protein
Accession:
AUK21380
Location: 1834030-1834761
NCBI BlastP on this gene
CR534_09530
O115 family O-antigen flippase
Accession:
AUK21381
Location: 1834754-1836241
NCBI BlastP on this gene
CR534_09535
IS1 family transposase
Accession:
AUK21382
Location: 1836301-1836995
NCBI BlastP on this gene
CR534_09540
hypothetical protein
Accession:
AUK21383
Location: 1837049-1838116
NCBI BlastP on this gene
CR534_09545
glycosyltransferase family 2 protein
Accession:
AUK21384
Location: 1838113-1839039
NCBI BlastP on this gene
CR534_09550
acyltransferase
Accession:
AUK24432
Location: 1839170-1839586
NCBI BlastP on this gene
CR534_09555
53. :
CP023346
Escherichia coli strain ETEC-2265 chromosome Total score: 5.5 Cumulative Blast bit score: 2050
colanic acid exporter
Accession:
ATB08887
Location: 2329153-2330631
NCBI BlastP on this gene
CJU64_12330
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
ATB08886
Location: 2327801-2329081
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
ATB08885
Location: 2326584-2327804
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
ATB08884
Location: 2325179-2326573
NCBI BlastP on this gene
CJU64_12315
UTP--glucose-1-phosphate uridylyltransferase
Accession:
ATB08883
Location: 2324111-2325004
NCBI BlastP on this gene
CJU64_12310
hypothetical protein
Accession:
ATB08882
Location: 2323811-2324074
NCBI BlastP on this gene
CJU64_12305
dTDP-glucose 4,6-dehydratase
Accession:
ATB08881
Location: 2322653-2323738
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 613
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
ATB08880
Location: 2321754-2322653
BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CJU64_12295
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
ATB08879
Location: 2320818-2321696
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CJU64_12290
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ATB08878
Location: 2320265-2320813
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 237
Sequence coverage: 100 %
E-value: 4e-76
NCBI BlastP on this gene
rfbC
glycosyltransferase WbsX family protein
Accession:
ATB08877
Location: 2319185-2320258
NCBI BlastP on this gene
CJU64_12280
hypothetical protein
Accession:
ATB08876
Location: 2318461-2319192
NCBI BlastP on this gene
CJU64_12275
O115 family O-antigen flippase
Accession:
ATB08875
Location: 2316981-2318468
NCBI BlastP on this gene
CJU64_12270
IS1 family transposase
Accession:
ATB08874
Location: 2316227-2316921
NCBI BlastP on this gene
CJU64_12265
hypothetical protein
Accession:
ATB08873
Location: 2315106-2316173
NCBI BlastP on this gene
CJU64_12260
glycosyltransferase family 2 protein
Accession:
ATB08872
Location: 2314183-2315109
NCBI BlastP on this gene
CJU64_12255
galactoside O-acetyltransferase
Accession:
ATB11568
Location: 2313636-2314052
NCBI BlastP on this gene
CJU64_12250
54. :
CP011511
Shigella boydii strain ATCC 9210 Total score: 5.5 Cumulative Blast bit score: 2050
colanic acid exporter
Accession:
AKI66088
Location: 1007987-1009465
NCBI BlastP on this gene
ABE81_05435
colanic acid biosynthesis protein
Accession:
AKI66089
Location: 1009837-1011117
NCBI BlastP on this gene
ABE81_05440
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AKI66090
Location: 1011114-1012334
NCBI BlastP on this gene
ABE81_05445
colanic acid biosynthesis protein
Accession:
AKI66091
Location: 1012345-1013739
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AKI66092
Location: 1013914-1014807
NCBI BlastP on this gene
ABE81_05455
dTDP-glucose 4,6-dehydratase
Accession:
AKI66093
Location: 1015180-1016265
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
ABE81_05460
dTDP-4-dehydrorhamnose reductase
Accession:
AKI66094
Location: 1016265-1017164
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
ABE81_05465
glucose-1-phosphate thymidylyltransferase
Accession:
AKI66095
Location: 1017222-1018100
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
ABE81_05470
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AKI66096
Location: 1018105-1018674
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 3e-76
NCBI BlastP on this gene
ABE81_05475
hypothetical protein
Accession:
AKI66097
Location: 1018661-1019503
NCBI BlastP on this gene
ABE81_05480
glycosyl transferase
Accession:
AKI66098
Location: 1019500-1020612
NCBI BlastP on this gene
ABE81_05485
flippase
Accession:
AKI66099
Location: 1020593-1021822
NCBI BlastP on this gene
ABE81_05490
hypothetical protein
Accession:
AKI66100
Location: 1021823-1022917
NCBI BlastP on this gene
ABE81_05495
polymerase
Accession:
AKI66101
Location: 1022921-1024213
NCBI BlastP on this gene
ABE81_05500
glycosyl transferase
Accession:
AKI69458
Location: 1024206-1025261
NCBI BlastP on this gene
ABE81_05505
55. :
CP000036
Shigella boydii Sb227 Total score: 5.5 Cumulative Blast bit score: 2050
probable export protein
Accession:
ABB65543
Location: 889383-890861
NCBI BlastP on this gene
wzxC
putative galactokinase
Accession:
ABB65542
Location: 887731-889011
NCBI BlastP on this gene
wcaK
putative colanic acid biosynthesis glycosyl transferase
Accession:
ABB65541
Location: 886514-887734
NCBI BlastP on this gene
wcaL
conserved hypothetical protein
Accession:
ABB65540
Location: 885109-886503
NCBI BlastP on this gene
wcaM
probable UDP-gal transferase
Accession:
ABB65539
Location: 884041-884934
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
ABB65538
Location: 882583-883668
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-6-deoxy-L-mannose-dehydrogenase
Accession:
ABB65537
Location: 881684-882583
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase
Accession:
ABB65536
Location: 880748-881626
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ABB65535
Location: 880174-880743
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 3e-76
NCBI BlastP on this gene
rfbC
putative glycosyl transferase
Accession:
ABB65534
Location: 879345-880187
NCBI BlastP on this gene
wbdE
putative glycosyl transferase
Accession:
ABB65533
Location: 878236-879348
NCBI BlastP on this gene
wbdF
O-antigen flippase
Accession:
ABB65532
Location: 877026-878255
NCBI BlastP on this gene
wzx
putative glycosyl transferase
Accession:
ABB65531
Location: 875931-876941
NCBI BlastP on this gene
wbdG
O-antigen polymerase
Accession:
ABB65530
Location: 874635-875927
NCBI BlastP on this gene
wzy
putative glycosyl transferase
Accession:
ABB65529
Location: 873587-874663
NCBI BlastP on this gene
wbdS
56. :
AF402312
Shigella boydii serotype 4 O-antigen gene cluster Total score: 5.5 Cumulative Blast bit score: 2050
putative glucose-1-phosphate uridylyltransferase
Accession:
AAL27309
Location: 1-765
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase
Accession:
AAL27310
Location: 1138-2223
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-6-deoxy-L-mannose-dehydrogenase
Accession:
AAL27311
Location: 2223-3122
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
AAL27312
Location: 3180-4058
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession:
AAL27313
Location: 4063-4632
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 3e-76
NCBI BlastP on this gene
rmlC
putative glycosyl transferase
Accession:
AAL27314
Location: 4619-5461
NCBI BlastP on this gene
wbdE
putative glycosyl transferase
Accession:
AAL27315
Location: 5458-6570
NCBI BlastP on this gene
wbdF
O-antigen flippase
Accession:
AAL27316
Location: 6551-7780
NCBI BlastP on this gene
wzx
putative glycosyl transferase
Accession:
AAL27317
Location: 7781-8875
NCBI BlastP on this gene
wbdG
O-antigen polymerase
Accession:
AAL27318
Location: 8879-10171
NCBI BlastP on this gene
wzy
putative glycosyl transferase
Accession:
AAL27319
Location: 10164-11219
NCBI BlastP on this gene
wbdS
57. :
AB812021
Escherichia coli genes for O-antigen biosynthetic locus Total score: 5.5 Cumulative Blast bit score: 2050
colanic acid biosynthesis protein
Accession:
BAQ01033
Location: 2-856
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession:
BAQ01034
Location: 1019-1924
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
BAQ01035
Location: 2297-3382
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
BAQ01036
Location: 3382-4281
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
BAQ01037
Location: 4339-5217
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
BAQ01038
Location: 5222-5791
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 4e-76
NCBI BlastP on this gene
rmlC
putative glycosyltransferase
Accession:
BAQ01039
Location: 5778-6620
NCBI BlastP on this gene
BAQ01039
putative glycosyltransferase
Accession:
BAQ01040
Location: 6617-7729
NCBI BlastP on this gene
BAQ01040
O-antigen flippase
Accession:
BAQ01041
Location: 7710-8939
NCBI BlastP on this gene
wzx
putative glycosyltransferase
Accession:
BAQ01042
Location: 8940-10034
NCBI BlastP on this gene
BAQ01042
O-antigen polymerase
Accession:
BAQ01043
Location: 10038-11330
NCBI BlastP on this gene
wzy
putative glycosyltransferase
Accession:
BAQ01044
Location: 11323-12378
NCBI BlastP on this gene
BAQ01044
58. :
CP000034
Shigella dysenteriae Sd197 Total score: 5.5 Cumulative Blast bit score: 2049
suppressor of ompF assembly mutants
Accession:
ABB62283
Location: 1999870-2001723
NCBI BlastP on this gene
asmA
conserved hypothetical protein
Accession:
ABB62284
Location: 2001776-2002066
NCBI BlastP on this gene
SDY_2199
hypothetical protein
Accession:
ABB62285
Location: 2002056-2002277
NCBI BlastP on this gene
SDY_2200
putative transport protein
Accession:
ABB62286
Location: 2002615-2004237
NCBI BlastP on this gene
yegH
iso-IS1 ORF2
Accession:
ABB62287
Location: 2004903-2005298
NCBI BlastP on this gene
SDY_2202
probable UDP-gal transferase
Accession:
ABB62288
Location: 2005517-2006410
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
ABB62289
Location: 2006782-2007867
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0