Search Results
Results pages:
1
,
2
,
3
,
4
,
5
,
6
,
7
,
8
,
9
,
10
MultiGeneBlast hits
Select gene cluster alignment
351. CP015229_0 Escherichia coli strain 06-00048 chromosome, complete genome.
352. AY948196_0 Shigella boydii serogroup 18 O antigen gene cluster, complete...
353. CP006834_0 Escherichia coli APEC O2-211 chromosome, complete genome.
354. AF402315_0 Shigella boydii serotype 9 O-antigen gene cluster, partial se...
355. CP010151_0 Escherichia coli strain D8, complete genome.
356. CP048603_1 Escherichia coli strain ChlosBP-23-1 chromosome, complete gen...
357. CP001671_0 Escherichia coli ABU 83972, complete genome.
358. CP048647_1 Escherichia coli strain GW-AmxH19 chromosome, complete genome.
359. CP043752_0 Escherichia coli strain CVM N56639 chromosome, complete genome.
360. AP017620_0 Escherichia coli DNA, complete genome, strain: MRY15-131.
361. LC177553_0 Escherichia coli DNA, O-antigen biosynthesis gene cluster OgN...
362. GU299793_0 Escherichia coli strain G1630 O antigen gene cluster, complet...
363. AB811603_0 Escherichia coli DNA, O-antigen biosynthetic locus, strain: D...
364. CP017220_0 Escherichia coli strain FAM21845 chromosome, complete genome.
365. CP007149_0 Escherichia coli RS218, complete genome.
366. CP047094_0 Salmonella sp. S13 chromosome, complete genome.
367. LT906474_0 Escherichia coli strain NCTC122 genome assembly, chromosome: 1.
368. CP049050_0 Escherichia coli strain pV11-19-E11-025-038 chromosome.
369. CP042982_0 Escherichia coli strain NCCP 14540 chromosome, complete genome.
370. CP024090_0 Escherichia coli strain WG5 chromosome, complete genome.
371. CP020543_0 Escherichia coli C, complete genome.
372. CP020933_0 Escherichia coli strain HB-Coli0 chromosome, complete genome.
373. CP019250_0 Escherichia coli strain 13KWH46 chromosome, complete genome.
374. CP029057_0 Escherichia coli strain FORC_081 chromosome, complete genome.
375. CP047876_0 Escherichia coli strain LD22-1 chromosome, complete genome.
376. CP047665_0 Escherichia coli strain LD26-1 chromosome, complete genome.
377. CP034745_0 Escherichia coli strain L100 chromosome, complete genome.
378. CP034727_0 Escherichia coli strain L41-1 chromosome, complete genome.
379. AP021894_0 Escherichia coli 2018-10-1CC DNA, complete genome.
380. AB812064_0 Escherichia coli genes for O-antigen biosynthetic locus, part...
381. CP048107_0 Escherichia coli strain 201609 chromosome, complete genome.
382. CP042606_0 Escherichia coli strain NCYU-29-19 chromosome, complete genome.
383. CP040269_0 Escherichia coli strain 1500 chromosome, complete genome.
384. CP036202_0 Escherichia coli strain L725 chromosome, complete genome.
385. CP010219_0 Escherichia coli strain M18, complete genome.
386. AB812020_0 Escherichia coli genes for O-antigen biosynthetic locus, part...
387. MF322753_0 Shigella boydii strain 07-6597 O-antigen gene cluster, partia...
388. CP024131_0 Escherichia coli strain 14EC007 chromosome, complete genome.
389. KJ710508_0 Escherichia coli strain U 8-41 serotype O48:K-:H- O-antigen g...
390. JQ751058_0 Escherichia coli strain 86-381 serogroup O180 O-antigen gene ...
391. AB812077_0 Escherichia coli genes for O-antigen biosynthetic locus, part...
392. LR134340_0 Escherichia coli strain NCTC11133 genome assembly, chromosome...
393. GU068044_0 Escherichia coli strain E1020-72 serogroup O158 O antigen gen...
394. FJ940774_0 Escherichia coli serogroup O35 O-antigen gene cluster, comple...
395. CP010170_0 Escherichia coli strain H6, complete genome.
396. CP010169_0 Escherichia coli strain H5, complete genome.
397. LS483303_0 Escherichia coli strain NCTC9967 genome assembly, chromosome: 1.
398. EU296424_0 Escherichia coli serogroup O129 O-antigen gene cluster, compl...
399. EU296423_0 Escherichia coli serogroup O135 O-antigen gene cluster, compl...
400. EU296422_0 Escherichia coli serogroup O13 O-antigen gene cluster, comple...
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP015229
: Escherichia coli strain 06-00048 chromosome Total score: 4.0 Cumulative Blast bit score: 1791
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid transporter
Accession:
ANO89826
Location: 2724117-2725595
NCBI BlastP on this gene
GJ11_14075
colanic acid biosynthesis protein
Accession:
ANO89825
Location: 2722561-2723841
NCBI BlastP on this gene
GJ11_14070
colanic acid biosynthesis protein
Accession:
ANO89824
Location: 2721344-2722564
NCBI BlastP on this gene
GJ11_14065
colanic acid biosynthesis protein
Accession:
ANO89823
Location: 2719939-2721333
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
ANO89822
Location: 2718871-2719764
NCBI BlastP on this gene
GJ11_14055
dTDP-glucose 4,6-dehydratase
Accession:
ANO89821
Location: 2717414-2718499
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 609
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
GJ11_14050
dTDP-4-dehydrorhamnose reductase
Accession:
ANO89820
Location: 2716515-2717414
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
GJ11_14045
glucose-1-phosphate thymidylyltransferase
Accession:
ANO89819
Location: 2715579-2716457
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
GJ11_14040
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ANO89818
Location: 2715032-2715574
NCBI BlastP on this gene
GJ11_14035
matE family protein
Accession:
ANO89817
Location: 2713770-2715014
NCBI BlastP on this gene
GJ11_14030
hypothetical protein
Accession:
ANO89816
Location: 2713063-2713773
NCBI BlastP on this gene
GJ11_14025
glycosyl transferase 2 family protein
Accession:
ANO89815
Location: 2712247-2713056
NCBI BlastP on this gene
GJ11_14020
hypothetical protein
Accession:
ANO89814
Location: 2710980-2712236
NCBI BlastP on this gene
GJ11_14015
mannosyltransferase
Accession:
ANO89813
Location: 2709952-2710980
NCBI BlastP on this gene
GJ11_14010
GDP-mannose 4,6-dehydratase
Accession:
ANO89812
Location: 2708809-2709933
NCBI BlastP on this gene
GJ11_14005
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AY948196
: Shigella boydii serogroup 18 O antigen gene cluster Total score: 4.0 Cumulative Blast bit score: 1791
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession:
AAY23333
Location: 1150-2235
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
RmlD
Accession:
AAY23334
Location: 2235-3134
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
RmlA
Accession:
AAY23335
Location: 3192-4070
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
RmlC
Accession:
AAY23336
Location: 4075-4632
NCBI BlastP on this gene
rmlC
Wzx
Accession:
AAY23337
Location: 5978-7195
NCBI BlastP on this gene
wzx
WbwX
Accession:
AAY23338
Location: 7313-8296
NCBI BlastP on this gene
wbwX
Wzy
Accession:
AAY23339
Location: 8380-9489
NCBI BlastP on this gene
wzy
WbwY
Accession:
AAY23340
Location: 9500-10396
NCBI BlastP on this gene
wbwY
WbwZ
Accession:
AAY23341
Location: 10393-11502
NCBI BlastP on this gene
wbwZ
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP006834
: Escherichia coli APEC O2-211 chromosome Total score: 4.0 Cumulative Blast bit score: 1790
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
AKK39455
Location: 3256368-3257846
NCBI BlastP on this gene
APECO2_12640
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AKK39454
Location: 3254428-3255708
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AKK39453
Location: 3253211-3254431
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AKK39452
Location: 3251806-3253200
NCBI BlastP on this gene
APECO2_12625
GalU regulator GalF
Accession:
AKK39451
Location: 3250738-3251631
NCBI BlastP on this gene
galF
hypothetical protein
Accession:
AXF92050
Location: 3250438-3250701
NCBI BlastP on this gene
APECO2_26925
dTDP-glucose 4,6-dehydratase
Accession:
AKK39449
Location: 3249280-3250365
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 607
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AKK39448
Location: 3248381-3249280
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
APECO2_12605
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AKK39447
Location: 3247448-3248323
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 582
Sequence coverage: 98 %
E-value: 0.0
NCBI BlastP on this gene
APECO2_12600
WxcM-like domain-containing protein
Accession:
AKK39446
Location: 3247020-3247430
NCBI BlastP on this gene
APECO2_12595
N-acetyltransferase
Accession:
AKK39445
Location: 3246566-3247033
NCBI BlastP on this gene
APECO2_12590
DegT/DnrJ/EryC1/StrS family aminotransferase
Accession:
AKK39444
Location: 3245467-3246573
NCBI BlastP on this gene
APECO2_12585
O50 family O-antigen flippase
Accession:
AKK39443
Location: 3244205-3245467
NCBI BlastP on this gene
APECO2_12580
hypothetical protein
Accession:
AKK39442
Location: 3243139-3244188
NCBI BlastP on this gene
APECO2_12575
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AKK39441
Location: 3242561-3243118
NCBI BlastP on this gene
rfbC
hypothetical protein
Accession:
AKK39440
Location: 3241532-3242494
NCBI BlastP on this gene
APECO2_12565
glycosyltransferase family 2 protein
Accession:
AKK39439
Location: 3240652-3241539
NCBI BlastP on this gene
APECO2_12560
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AF402315
: Shigella boydii serotype 9 O-antigen gene cluster Total score: 4.0 Cumulative Blast bit score: 1790
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
glucose-1-phosphate uridylyltransferase
Accession:
AAL27346
Location: 1-765
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase
Accession:
AAL27347
Location: 1138-2223
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 613
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-6-deoxy-L-mannose-dehydrogenase
Accession:
AAL27348
Location: 2223-3122
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
AAL27349
Location: 3180-4061
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 587
Sequence coverage: 98 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
putative glycosyl transferase
Accession:
AAL27350
Location: 4069-4932
NCBI BlastP on this gene
wbgQ
O-antigen polymerase
Accession:
AAL27351
Location: 4922-6139
NCBI BlastP on this gene
wzy
putative glycosyl transferase
Accession:
AAL27352
Location: 6141-6947
NCBI BlastP on this gene
wbgR
O-antigen flippase
Accession:
AAL27353
Location: 6944-8191
NCBI BlastP on this gene
wzx
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession:
AAL27354
Location: 8163-8696
NCBI BlastP on this gene
rmlC
putative glycosyl transferase
Accession:
AAL27355
Location: 8698-9471
NCBI BlastP on this gene
wbgS
6-phosphogluconate dehydrogenase
Accession:
AAL27356
Location: 9595-10911
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP010151
: Escherichia coli strain D8 Total score: 4.0 Cumulative Blast bit score: 1789
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
APK33196
Location: 962025-963503
NCBI BlastP on this gene
RG41_04480
colanic acid biosynthesis protein
Accession:
APK33197
Location: 963683-964963
NCBI BlastP on this gene
RG41_04485
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
APK33198
Location: 964960-966180
NCBI BlastP on this gene
RG41_04490
colanic acid biosynthesis protein
Accession:
APK33199
Location: 966191-967585
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
APK33200
Location: 967760-968653
NCBI BlastP on this gene
RG41_04500
dTDP-glucose 4,6-dehydratase
Accession:
APK33201
Location: 969026-970111
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 613
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
RG41_04505
dTDP-4-dehydrorhamnose reductase
Accession:
APK33202
Location: 970111-971010
BlastP hit with rmlD
Percentage identity: 93 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
RG41_04510
glucose-1-phosphate thymidylyltransferase
Accession:
APK33203
Location: 971069-971947
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
RG41_04515
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
APK33204
Location: 971952-972500
NCBI BlastP on this gene
RG41_04520
transporter
Accession:
APK33205
Location: 972512-973750
NCBI BlastP on this gene
RG41_04525
glycosyl transferase family 2
Accession:
APK33206
Location: 973747-974649
NCBI BlastP on this gene
RG41_04530
polymerase
Accession:
APK33207
Location: 974646-975833
NCBI BlastP on this gene
RG41_04535
glycosyltransferase
Accession:
APK33208
Location: 975946-977049
NCBI BlastP on this gene
RG41_04540
UDP-glucose 4-epimerase
Accession:
APK33209
Location: 977058-978092
NCBI BlastP on this gene
RG41_04545
capsular biosynthesis protein
Accession:
APK36989
Location: 978094-979200
NCBI BlastP on this gene
RG41_04550
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP048603
: Escherichia coli strain ChlosBP-23-1 chromosome Total score: 4.0 Cumulative Blast bit score: 1788
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Accession:
QIB10632
Location: 1809496-1810974
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QIB10633
Location: 1811047-1812327
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QIB10634
Location: 1812324-1813544
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QIB10635
Location: 1813555-1814949
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QIB10636
Location: 1815124-1816017
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QIB10637
Location: 1816389-1817474
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QIB10638
Location: 1817474-1818373
BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 589
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QIB10639
Location: 1818431-1819309
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 591
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QIB10640
Location: 1819312-1819854
NCBI BlastP on this gene
rfbC
O25 family O-antigen flippase
Accession:
QIB10641
Location: 1819856-1821121
NCBI BlastP on this gene
wzx
glycosyltransferase family 2 protein
Accession:
QIB10642
Location: 1821121-1822086
NCBI BlastP on this gene
G3M71_08480
glycosyltransferase family 4 protein
Accession:
QIB10643
Location: 1822153-1823301
NCBI BlastP on this gene
G3M71_08485
acetyltransferase
Accession:
QIB13241
Location: 1824787-1825083
NCBI BlastP on this gene
G3M71_08495
glycosyltransferase family 4 protein
Accession:
QIB10644
Location: 1825360-1826463
NCBI BlastP on this gene
G3M71_08500
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP001671
: Escherichia coli ABU 83972 Total score: 4.0 Cumulative Blast bit score: 1788
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
lipopolysaccharide biosynthesis protein WzxC
Accession:
ADN46893
Location: 2382235-2383713
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis protein WcaK
Accession:
ADN46892
Location: 2380882-2382162
NCBI BlastP on this gene
wcaK
putative colanic acid biosynthesis glycosyl transferase
Accession:
ADN46891
Location: 2379665-2380885
NCBI BlastP on this gene
wcaL
putative colanic acid biosynthetic protein WcaM
Accession:
ADN46890
Location: 2378260-2379654
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase subunit GalF
Accession:
ADN46889
Location: 2377192-2378085
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase rmlB
Accession:
ADN46888
Location: 2375735-2376820
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
ADN46887
Location: 2374836-2375735
BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 589
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
ADN46886
Location: 2373900-2374778
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 591
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ADN46885
Location: 2373355-2373897
NCBI BlastP on this gene
rmlC
polysaccharide biosynthesis protein
Accession:
ADN46884
Location: 2372088-2373353
NCBI BlastP on this gene
ECABU_c23690
putative glycosyl transferase family 2
Accession:
ADN46883
Location: 2371123-2372088
NCBI BlastP on this gene
ECABU_c23680
putative glycosyltransferase
Accession:
ADN46882
Location: 2369908-2371056
NCBI BlastP on this gene
ECABU_c23670
hypothetical membrane protein
Accession:
ADN46881
Location: 2368719-2369480
NCBI BlastP on this gene
ECABU_c23660
putative O-acetyl transferase
Accession:
ADN46880
Location: 2368125-2368433
NCBI BlastP on this gene
ECABU_c23650
lipopolysaccharide biosynthesis protein
Accession:
ADN46879
Location: 2366745-2367848
NCBI BlastP on this gene
wbuH
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP048647
: Escherichia coli strain GW-AmxH19 chromosome Total score: 4.0 Cumulative Blast bit score: 1786
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Accession:
QIB94587
Location: 1835614-1837092
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QIB94588
Location: 1837272-1838552
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QIB94589
Location: 1838549-1839769
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QIB94590
Location: 1839780-1841174
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QIB94591
Location: 1841349-1842242
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QIB94592
Location: 1842615-1843700
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 610
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QIB94593
Location: 1843700-1844599
BlastP hit with rmlD
Percentage identity: 93 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QIB94594
Location: 1844658-1845536
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QIB94595
Location: 1845541-1846089
NCBI BlastP on this gene
rfbC
O4 family O-antigen flippase
Accession:
QIB94596
Location: 1846101-1847339
NCBI BlastP on this gene
wzx
glycosyltransferase family 2 protein
Accession:
QIB94597
Location: 1847336-1848238
NCBI BlastP on this gene
G3273_08645
O4 family O-antigen polymerase
Accession:
QIB94598
Location: 1848235-1849422
NCBI BlastP on this gene
wzy
glycosyltransferase family 4 protein
Accession:
QIB94599
Location: 1849535-1850638
NCBI BlastP on this gene
G3273_08655
UDP-N-acetylglucosamine
Accession:
QIB94600
Location: 1850647-1851681
NCBI BlastP on this gene
fnlA
capsular polysaccharide biosynthesis protein CapF
Accession:
QIB97407
Location: 1851683-1852789
NCBI BlastP on this gene
G3273_08665
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP043752
: Escherichia coli strain CVM N56639 chromosome Total score: 4.0 Cumulative Blast bit score: 1782
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QEP83891
Location: 1857358-1858638
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QEP83892
Location: 1858635-1859855
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QEP83893
Location: 1859866-1861260
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QEP83894
Location: 1861435-1862328
NCBI BlastP on this gene
galF
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession:
QEP86621
Location: 1862736-1863845
NCBI BlastP on this gene
F1L18_09220
dTDP-glucose 4,6-dehydratase
Accession:
QEP83895
Location: 1863849-1864934
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 599
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QEP83896
Location: 1864934-1865833
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 589
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QEP83897
Location: 1865891-1866769
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 594
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QEP83898
Location: 1866774-1867304
NCBI BlastP on this gene
rfbC
hypothetical protein
Accession:
QEP83899
Location: 1867376-1868554
NCBI BlastP on this gene
F1L18_09245
polysaccharide pyruvyl transferase family protein
Accession:
QEP83900
Location: 1868544-1869752
NCBI BlastP on this gene
F1L18_09250
coenzyme F420 hydrogenase
Accession:
QEP83901
Location: 1869749-1870948
NCBI BlastP on this gene
F1L18_09255
glycosyltransferase family 2 protein
Accession:
QEP83902
Location: 1870945-1871805
NCBI BlastP on this gene
F1L18_09260
oligosaccharide repeat unit polymerase
Accession:
QEP83903
Location: 1871792-1873006
NCBI BlastP on this gene
F1L18_09265
glycosyltransferase family 4 protein
Accession:
QEP83904
Location: 1873003-1874121
NCBI BlastP on this gene
F1L18_09270
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AP017620
: Escherichia coli DNA Total score: 4.0 Cumulative Blast bit score: 1442
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
lipopolysaccharide biosynthesis protein WzxC
Accession:
BAX20324
Location: 1062181-1063659
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis protein
Accession:
BAX20325
Location: 1063730-1065010
NCBI BlastP on this gene
MRY15131_c09830
GDP-mannose-dependent
Accession:
BAX20326
Location: 1065007-1066227
NCBI BlastP on this gene
pimB
putative colanic acid biosynthesis protein
Accession:
BAX20327
Location: 1066238-1067632
NCBI BlastP on this gene
MRY15131_c09850
UTP--glucose-1-phosphate uridylyltransferase
Accession:
BAX20328
Location: 1067807-1068700
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
BAX20329
Location: 1069073-1070158
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
BAX20330
Location: 1070158-1071057
BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase 1
Accession:
BAX20331
Location: 1071116-1071994
BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 599
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA1
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
BAX20332
Location: 1071999-1072547
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 247
Sequence coverage: 96 %
E-value: 5e-80
NCBI BlastP on this gene
rfbC
putative O-antigen transporter
Accession:
BAX20333
Location: 1072579-1073817
NCBI BlastP on this gene
rfbX
UDP-N-acetylglucosamine 2-epimerase
Accession:
BAX20334
Location: 1073827-1074954
NCBI BlastP on this gene
wecB_1
hypothetical protein
Accession:
BAX20335
Location: 1075023-1076033
NCBI BlastP on this gene
MRY15131_c09930
hypothetical protein
Accession:
BAX20336
Location: 1076085-1077089
NCBI BlastP on this gene
MRY15131_c09940
putative glycosyltransferase EpsE
Accession:
BAX20337
Location: 1077091-1078050
NCBI BlastP on this gene
epsE_2
glycosyl transferases group 1
Accession:
BAX20338
Location: 1078060-1079124
NCBI BlastP on this gene
MRY15131_c09960
6-phosphogluconate dehydrogenase, decarboxylating
Accession:
BAX20339
Location: 1079229-1080635
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
LC177553
: Escherichia coli DNA, O-antigen biosynthesis gene cluster OgN16, strain: E1642. Total score: 4.0 Cumulative Blast bit score: 1434
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession:
BAV90521
Location: 14-1408
NCBI BlastP on this gene
wcaM
UDP-N-acetylglucosamine 4-epimerase
Accession:
BAV90522
Location: 1566-2561
NCBI BlastP on this gene
gne
UTP-glucose-1-phosphate uridylyltransferase
Accession:
BAV90523
Location: 2804-3697
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
BAV90524
Location: 4068-5153
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
BAV90525
Location: 5153-6052
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 606
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
BAV90526
Location: 6059-6988
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
BAV90527
Location: 6993-7529
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 238
Sequence coverage: 98 %
E-value: 1e-76
NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession:
BAV90528
Location: 7542-8780
NCBI BlastP on this gene
wzx
O-antigen polymerase
Accession:
BAV90529
Location: 8788-10008
NCBI BlastP on this gene
wzy
putative glycosyltranslocase
Accession:
BAV90530
Location: 9977-10999
NCBI BlastP on this gene
BAV90530
putative glycosyltranslocase
Accession:
BAV90531
Location: 10989-12080
NCBI BlastP on this gene
BAV90531
hypothetical protein
Accession:
BAV90532
Location: 12081-13232
NCBI BlastP on this gene
BAV90532
putative glycosyltranslocase
Accession:
BAV90533
Location: 13510-14262
NCBI BlastP on this gene
BAV90533
6-phosphogluconate dehydrogenase
Accession:
BAV90534
Location: 14365-15771
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
GU299793
: Escherichia coli strain G1630 O antigen gene cluster Total score: 4.0 Cumulative Blast bit score: 1431
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession:
ADC54945
Location: 1012-2097
NCBI BlastP on this gene
rmlB
RmlD
Accession:
ADC54946
Location: 2097-2996
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
RmlA
Accession:
ADC54947
Location: 3054-3929
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 590
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
RmlC
Accession:
ADC54948
Location: 3937-4494
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 236
Sequence coverage: 99 %
E-value: 2e-75
NCBI BlastP on this gene
rmlC
Wzx
Accession:
ADC54949
Location: 4491-5738
NCBI BlastP on this gene
wzx
Wzy
Accession:
ADC54950
Location: 5795-6985
NCBI BlastP on this gene
wzy
WekT
Accession:
ADC54951
Location: 6967-7902
NCBI BlastP on this gene
wekT
WekU
Accession:
ADC54952
Location: 7899-8687
NCBI BlastP on this gene
wekU
WekV
Accession:
ADC54953
Location: 8684-9790
NCBI BlastP on this gene
wekV
WekW
Accession:
ADC54954
Location: 10132-11235
NCBI BlastP on this gene
wekW
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AB811603
: Escherichia coli DNA, O-antigen biosynthetic locus, strain: D-M3219-54. Total score: 4.0 Cumulative Blast bit score: 1431
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
not annotated
Accession:
BAQ00680
Location: 1-897
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession:
BAQ00681
Location: 1060-1965
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
BAQ00682
Location: 2338-3423
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
BAQ00683
Location: 3423-4322
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
BAQ00684
Location: 4380-5255
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 590
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
BAQ00685
Location: 5263-5820
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 236
Sequence coverage: 99 %
E-value: 2e-75
NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession:
BAQ00686
Location: 5817-7064
NCBI BlastP on this gene
wzx
O-antigen polymerase
Accession:
BAQ00687
Location: 7166-8311
NCBI BlastP on this gene
wzy
putative glycosyltransferase
Accession:
BAQ00688
Location: 8320-9228
NCBI BlastP on this gene
BAQ00688
putative glycosyltransferase
Accession:
BAQ00689
Location: 9225-10013
NCBI BlastP on this gene
BAQ00689
putative glycosyltransferase
Accession:
BAQ00690
Location: 10010-11116
NCBI BlastP on this gene
BAQ00690
putative glycosyltransferase
Accession:
BAQ00691
Location: 11458-12561
NCBI BlastP on this gene
BAQ00691
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP017220
: Escherichia coli strain FAM21845 chromosome Total score: 4.0 Cumulative Blast bit score: 1430
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
ARD51921
Location: 2310006-2311484
NCBI BlastP on this gene
BHT24_11740
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
ARD51920
Location: 2308450-2309730
NCBI BlastP on this gene
BHT24_11735
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
ARD51919
Location: 2307233-2308453
NCBI BlastP on this gene
BHT24_11730
colanic acid biosynthesis protein WcaM
Accession:
ARD51918
Location: 2305828-2307222
NCBI BlastP on this gene
BHT24_11725
GalU regulator GalF
Accession:
ARD51917
Location: 2304760-2305653
NCBI BlastP on this gene
BHT24_11720
dTDP-glucose 4,6-dehydratase
Accession:
BHT24_11715
Location: 2303301-2304387
NCBI BlastP on this gene
BHT24_11715
dTDP-4-dehydrorhamnose reductase
Accession:
ARD51916
Location: 2302402-2303301
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 603
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
BHT24_11710
glucose-1-phosphate thymidylyltransferase
Accession:
ARD51915
Location: 2301466-2302344
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 591
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
BHT24_11705
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ARD51914
Location: 2300904-2301461
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 236
Sequence coverage: 99 %
E-value: 2e-75
NCBI BlastP on this gene
BHT24_11700
polysaccharide biosynthesis protein
Accession:
ARD51913
Location: 2299660-2300907
NCBI BlastP on this gene
BHT24_11695
nucleoid-structuring protein H-NS
Accession:
ARD51912
Location: 2298413-2299603
NCBI BlastP on this gene
BHT24_11690
rhamnosyl transferase
Accession:
ARD54362
Location: 2297496-2298431
NCBI BlastP on this gene
BHT24_11685
glycosyl transferase family A
Accession:
ARD51911
Location: 2296711-2297499
NCBI BlastP on this gene
BHT24_11680
glycosyl transferase family 1
Accession:
ARD51910
Location: 2295608-2296714
NCBI BlastP on this gene
BHT24_11675
glycosyl transferase family 1
Accession:
ARD51909
Location: 2294170-2295273
NCBI BlastP on this gene
BHT24_11670
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP007149
: Escherichia coli RS218 Total score: 3.5 Cumulative Blast bit score: 1450
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
AJM74243
Location: 2275262-2276740
NCBI BlastP on this gene
W817_11815
colanic acid biosynthesis protein
Accession:
AJM74242
Location: 2273319-2274599
NCBI BlastP on this gene
W817_11810
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AJM74241
Location: 2272102-2273322
NCBI BlastP on this gene
W817_11805
colanic acid biosynthesis protein
Accession:
AJM74240
Location: 2270697-2272091
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase subunit GalU
Accession:
AJM74239
Location: 2269629-2270522
NCBI BlastP on this gene
W817_11795
dTDP-glucose 4,6-dehydratase
Accession:
AJM74238
Location: 2268171-2269256
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 609
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
W817_11790
dTDP-4-dehydrorhamnose reductase
Accession:
AJM74237
Location: 2267272-2268171
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
W817_11785
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AJM74236
Location: 2265775-2266332
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 236
Sequence coverage: 99 %
E-value: 2e-75
NCBI BlastP on this gene
W817_11775
nucleoid-structuring protein H-NS
Accession:
AJM74235
Location: 2263285-2264475
NCBI BlastP on this gene
W817_11765
rhamnosyl transferase
Accession:
AJM74234
Location: 2262368-2263303
NCBI BlastP on this gene
W817_11760
glycosyl transferase family A
Accession:
AJM74233
Location: 2261583-2262371
NCBI BlastP on this gene
W817_11755
glycosyl transferase family 1
Accession:
AJM74232
Location: 2260480-2261586
NCBI BlastP on this gene
W817_11750
glycosyl transferase family 1
Accession:
AJM74231
Location: 2259035-2260138
NCBI BlastP on this gene
W817_11745
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP047094
: Salmonella sp. S13 chromosome Total score: 3.5 Cumulative Blast bit score: 1448
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Accession:
QHN45994
Location: 2711036-2712514
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QHN45993
Location: 2709480-2710760
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QHN45992
Location: 2708263-2709483
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QHN45991
Location: 2706858-2708252
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QHN45990
Location: 2705790-2706683
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QHN45989
Location: 2704333-2705418
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 615
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QHN45988
Location: 2703434-2704333
BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase
Accession:
GQN55_14870
Location: 2703281-2703376
NCBI BlastP on this gene
GQN55_14870
IS5 family transposase
Accession:
QHN47888
Location: 2702279-2703202
NCBI BlastP on this gene
GQN55_14865
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QHN45987
Location: 2700879-2701427
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 1e-76
NCBI BlastP on this gene
rfbC
glycosyltransferase
Accession:
QHN45986
Location: 2699840-2700808
NCBI BlastP on this gene
GQN55_14850
glycosyltransferase
Accession:
QHN45985
Location: 2699100-2699843
NCBI BlastP on this gene
GQN55_14845
EpsG family protein
Accession:
QHN45984
Location: 2698071-2699084
NCBI BlastP on this gene
GQN55_14840
Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB
Accession:
QHN45983
Location: 2696678-2697952
NCBI BlastP on this gene
tviB
Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC
Accession:
QHN45982
Location: 2695632-2696663
NCBI BlastP on this gene
tviC
hypothetical protein
Accession:
QHN45981
Location: 2694783-2695535
NCBI BlastP on this gene
GQN55_14825
Query: Escherichia coli strain O146 O antigen gene cluster, complete
LT906474
: Escherichia coli strain NCTC122 genome assembly, chromosome: 1. Total score: 3.5 Cumulative Blast bit score: 1446
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
putative flippase (Putative export protein)
Accession:
SNW12720
Location: 1780725-1782203
NCBI BlastP on this gene
wzxC
Colanic acid biosynthesis protein
Accession:
SNW12721
Location: 1782479-1783759
NCBI BlastP on this gene
wcaK
putative colanic acid biosynthesis glycosyltransferase
Accession:
SNW12722
Location: 1783756-1784976
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein
Accession:
SNW12723
Location: 1784987-1786381
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase subunit GalF
Accession:
SNW12724
Location: 1786556-1787449
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase rmlB
Accession:
SNW12725
Location: 1787822-1788907
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
SNW12726
Location: 1788907-1789806
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
SNW12727
Location: 1789864-1790739
BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 596
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
SNW12728
Location: 1790747-1791289
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 7e-78
NCBI BlastP on this gene
rfbC
putative O-antigen transporter
Accession:
SNW12729
Location: 1791292-1792578
NCBI BlastP on this gene
SAMEA4364219_01692
Uncharacterised protein
Accession:
SNW12730
Location: 1792589-1793425
NCBI BlastP on this gene
SAMEA4364219_01693
Uncharacterised protein
Accession:
SNW12731
Location: 1793433-1794497
NCBI BlastP on this gene
SAMEA4364219_01694
glycosyltransferase WbgP
Accession:
SNW12732
Location: 1794503-1795279
NCBI BlastP on this gene
wbgP
Uncharacterised protein
Accession:
SNW12733
Location: 1795272-1796153
NCBI BlastP on this gene
SAMEA4364219_01696
putative glycosyl transferase
Accession:
SNW12734
Location: 1796150-1797262
NCBI BlastP on this gene
wbdH
6-phosphogluconate dehydrogenase
Accession:
SNW12735
Location: 1797386-1798792
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP049050
: Escherichia coli strain pV11-19-E11-025-038 chromosome. Total score: 3.5 Cumulative Blast bit score: 1446
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Accession:
QIE52832
Location: 3544923-3546401
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QIE52831
Location: 3543367-3544647
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QIE52830
Location: 3542150-3543370
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QIE52829
Location: 3540745-3542139
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QIE52828
Location: 3539677-3540570
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QIE52827
Location: 3538219-3539304
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QIE52826
Location: 3537320-3538219
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QIE52825
Location: 3536387-3537262
BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 596
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QIE52824
Location: 3535837-3536379
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 7e-78
NCBI BlastP on this gene
rfbC
flippase
Accession:
QIE52823
Location: 3534548-3535834
NCBI BlastP on this gene
G4Q92_17005
hypothetical protein
Accession:
QIE52822
Location: 3533701-3534537
NCBI BlastP on this gene
G4Q92_17000
EpsG family protein
Accession:
QIE52821
Location: 3532629-3533693
NCBI BlastP on this gene
G4Q92_16995
glycosyltransferase family 2 protein
Accession:
QIE52820
Location: 3531847-3532623
NCBI BlastP on this gene
G4Q92_16990
hypothetical protein
Accession:
QIE52819
Location: 3530973-3531854
NCBI BlastP on this gene
G4Q92_16985
glycosyltransferase family 4 protein
Accession:
QIE52818
Location: 3529864-3530976
NCBI BlastP on this gene
G4Q92_16980
NADP-dependent phosphogluconate dehydrogenase
Accession:
QIE52817
Location: 3528334-3529740
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP042982
: Escherichia coli strain NCCP 14540 chromosome Total score: 3.5 Cumulative Blast bit score: 1446
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Accession:
QHG49782
Location: 3317312-3318790
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QHG49783
Location: 3318936-3320216
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QHG49784
Location: 3320213-3321433
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QHG49785
Location: 3321444-3322838
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QHG49786
Location: 3323013-3323906
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QHG49787
Location: 3324278-3325363
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 609
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QHG49788
Location: 3325363-3326262
BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QHG49789
Location: 3327202-3327744
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 242
Sequence coverage: 100 %
E-value: 4e-78
NCBI BlastP on this gene
rfbC
O26 family O-antigen flippase
Accession:
QHG49790
Location: 3327744-3329006
NCBI BlastP on this gene
wzx
glycosyltransferase family 2 protein
Accession:
QHG49791
Location: 3330109-3330903
NCBI BlastP on this gene
FOV73_16455
UDP-N-acetylglucosamine
Accession:
QHG49792
Location: 3330915-3331949
NCBI BlastP on this gene
fnlA
capsular polysaccharide biosynthesis protein CapF
Accession:
FOV73_16465
Location: 3331951-3333056
NCBI BlastP on this gene
FOV73_16465
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession:
FOV73_16470
Location: 3333053-3334182
NCBI BlastP on this gene
FOV73_16470
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP024090
: Escherichia coli strain WG5 chromosome Total score: 3.5 Cumulative Blast bit score: 1446
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
ATU34581
Location: 1781586-1783064
NCBI BlastP on this gene
CSR56_08840
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
ATU34582
Location: 1783340-1784620
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
ATU34583
Location: 1784617-1785837
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
ATU34584
Location: 1785848-1787242
NCBI BlastP on this gene
CSR56_08855
GalU regulator GalF
Accession:
ATU34585
Location: 1787417-1788310
NCBI BlastP on this gene
CSR56_08860
hypothetical protein
Accession:
ATU34586
Location: 1788347-1788610
NCBI BlastP on this gene
CSR56_08865
dTDP-glucose 4,6-dehydratase
Accession:
ATU34587
Location: 1788683-1789768
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
ATU34588
Location: 1789768-1790667
NCBI BlastP on this gene
CSR56_08875
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
ATU34589
Location: 1790725-1791600
BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 596
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
CSR56_08880
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ATU34590
Location: 1791608-1792150
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 7e-78
NCBI BlastP on this gene
rfbC
flippase
Accession:
ATU34591
Location: 1792153-1793439
NCBI BlastP on this gene
CSR56_08890
hypothetical protein
Accession:
ATU34592
Location: 1793450-1794286
NCBI BlastP on this gene
CSR56_08895
EpsG family protein
Accession:
ATU34593
Location: 1794294-1795358
NCBI BlastP on this gene
CSR56_08900
glycosyltransferase family 2 protein
Accession:
ATU34594
Location: 1795364-1796140
NCBI BlastP on this gene
CSR56_08905
hypothetical protein
Accession:
ATU34595
Location: 1796133-1797014
NCBI BlastP on this gene
CSR56_08910
glycosyltransferase family 1 protein
Accession:
ATU34596
Location: 1797011-1798123
NCBI BlastP on this gene
CSR56_08915
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession:
ATU34597
Location: 1798247-1799653
NCBI BlastP on this gene
CSR56_08920
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP020543
: Escherichia coli C Total score: 3.5 Cumulative Blast bit score: 1446
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
ARE47179
Location: 1780430-1781908
NCBI BlastP on this gene
B6N50_08855
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
ARE47180
Location: 1782184-1783464
NCBI BlastP on this gene
B6N50_08860
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
ARE47181
Location: 1783461-1784681
NCBI BlastP on this gene
B6N50_08865
colanic acid biosynthesis protein WcaM
Accession:
ARE47182
Location: 1784692-1786086
NCBI BlastP on this gene
B6N50_08870
GalU regulator GalF
Accession:
ARE47183
Location: 1786261-1787154
NCBI BlastP on this gene
B6N50_08875
hypothetical protein
Accession:
ARE47184
Location: 1787191-1787454
NCBI BlastP on this gene
B6N50_08880
dTDP-glucose 4,6-dehydratase
Accession:
ARE47185
Location: 1787527-1788612
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
B6N50_08885
NAD(P)-dependent oxidoreductase
Accession:
ARE47186
Location: 1788612-1789511
NCBI BlastP on this gene
B6N50_08890
glucose-1-phosphate thymidylyltransferase
Accession:
ARE47187
Location: 1789569-1790444
BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 596
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
B6N50_08895
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ARE47188
Location: 1790452-1790994
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 7e-78
NCBI BlastP on this gene
B6N50_08900
hypothetical protein
Accession:
ARE47189
Location: 1790997-1792283
NCBI BlastP on this gene
B6N50_08905
hypothetical protein
Accession:
ARE47190
Location: 1792294-1793130
NCBI BlastP on this gene
B6N50_08910
hypothetical protein
Accession:
ARE47191
Location: 1793138-1794202
NCBI BlastP on this gene
B6N50_08915
hypothetical protein
Accession:
ARE47192
Location: 1794208-1794984
NCBI BlastP on this gene
B6N50_08920
hypothetical protein
Accession:
ARE47193
Location: 1794977-1795858
NCBI BlastP on this gene
B6N50_08925
glycosyl transferase family 1
Accession:
ARE47194
Location: 1795855-1796967
NCBI BlastP on this gene
B6N50_08930
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession:
ARE47195
Location: 1797091-1798497
NCBI BlastP on this gene
B6N50_08935
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP020933
: Escherichia coli strain HB-Coli0 chromosome Total score: 3.5 Cumulative Blast bit score: 1445
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
lipopolysaccharide biosynthesis protein
Accession:
ARM79322
Location: 2312610-2314088
NCBI BlastP on this gene
B9W17_11770
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
ARM81777
Location: 2314268-2315548
NCBI BlastP on this gene
B9W17_11775
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
ARM79323
Location: 2315545-2316765
NCBI BlastP on this gene
B9W17_11780
colanic acid biosynthesis protein WcaM
Accession:
ARM79324
Location: 2316776-2318170
NCBI BlastP on this gene
B9W17_11785
UTP--glucose-1-phosphate uridylyltransferase
Accession:
ARM79325
Location: 2318345-2319238
NCBI BlastP on this gene
B9W17_11790
hypothetical protein
Accession:
ARM79326
Location: 2319278-2319538
NCBI BlastP on this gene
B9W17_11795
dTDP-glucose 4,6-dehydratase
Accession:
ARM79327
Location: 2319610-2320695
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 615
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
B9W17_11800
NAD(P)-dependent oxidoreductase
Accession:
ARM79328
Location: 2320695-2321594
NCBI BlastP on this gene
B9W17_11805
glucose-1-phosphate thymidylyltransferase
Accession:
ARM79329
Location: 2321652-2322530
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 594
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
B9W17_11810
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ARM79330
Location: 2322535-2323083
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 236
Sequence coverage: 96 %
E-value: 1e-75
NCBI BlastP on this gene
B9W17_11815
hypothetical protein
Accession:
ARM79331
Location: 2323095-2323973
NCBI BlastP on this gene
B9W17_11820
hypothetical protein
Accession:
ARM79332
Location: 2323980-2325227
NCBI BlastP on this gene
B9W17_11825
ISAs1 family transposase
Accession:
ARM81778
Location: 2325507-2326571
NCBI BlastP on this gene
B9W17_11830
hypothetical protein
Accession:
ARM79333
Location: 2326657-2327487
NCBI BlastP on this gene
B9W17_11835
hypothetical protein
Accession:
ARM79334
Location: 2327972-2328817
NCBI BlastP on this gene
B9W17_11840
hypothetical protein
Accession:
ARM79335
Location: 2328828-2329946
NCBI BlastP on this gene
B9W17_11845
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP019250
: Escherichia coli strain 13KWH46 chromosome Total score: 3.5 Cumulative Blast bit score: 1445
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
lipopolysaccharide biosynthesis protein
Accession:
AUY81241
Location: 2614632-2616110
NCBI BlastP on this gene
BWI84_13460
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AUY83447
Location: 2616290-2617570
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AUY81242
Location: 2617567-2618787
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AUY81243
Location: 2618798-2620192
NCBI BlastP on this gene
BWI84_13475
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AUY81244
Location: 2620367-2621260
NCBI BlastP on this gene
galF
hypothetical protein
Accession:
AUY81245
Location: 2621300-2621560
NCBI BlastP on this gene
BWI84_13485
dTDP-glucose 4,6-dehydratase
Accession:
AUY81246
Location: 2621632-2622717
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 615
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
NAD(P)-dependent oxidoreductase
Accession:
AUY81247
Location: 2622717-2623616
NCBI BlastP on this gene
BWI84_13495
glucose-1-phosphate thymidylyltransferase
Accession:
AUY81248
Location: 2623674-2624552
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 594
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AUY81249
Location: 2624557-2625105
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 236
Sequence coverage: 96 %
E-value: 1e-75
NCBI BlastP on this gene
rfbC
hypothetical protein
Accession:
AUY81250
Location: 2625117-2625995
NCBI BlastP on this gene
BWI84_13510
hypothetical protein
Accession:
AUY81251
Location: 2626002-2627249
NCBI BlastP on this gene
BWI84_13515
ISAs1 family transposase
Accession:
BWI84_13520
Location: 2627454-2628593
NCBI BlastP on this gene
BWI84_13520
hypothetical protein
Accession:
AUY81252
Location: 2628679-2629509
NCBI BlastP on this gene
BWI84_13525
hypothetical protein
Accession:
AUY81253
Location: 2629994-2630839
NCBI BlastP on this gene
BWI84_13530
hypothetical protein
Accession:
AUY81254
Location: 2630850-2631968
NCBI BlastP on this gene
BWI84_13535
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP029057
: Escherichia coli strain FORC_081 chromosome Total score: 3.5 Cumulative Blast bit score: 1443
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
Colanic acid biosynthesis protein wcaM
Accession:
QBP85202
Location: 479362-480756
NCBI BlastP on this gene
FORC81_0439
UDP-glucose 4-epimerase
Accession:
QBP85203
Location: 480914-481909
NCBI BlastP on this gene
FORC81_0440
UTP-glucose-1-phosphate uridylyltransferase
Accession:
QBP85204
Location: 482151-483044
NCBI BlastP on this gene
FORC81_0441
Membrane protein involved in the export of O-antigen
Accession:
QBP85205
Location: 483339-484613
NCBI BlastP on this gene
FORC81_0442
UDP-galactopyranose mutase
Accession:
QBP85206
Location: 484625-485719
NCBI BlastP on this gene
FORC81_0443
hypothetical protein
Accession:
QBP85207
Location: 485723-486715
NCBI BlastP on this gene
FORC81_0444
dTDP-glucose 4,6-dehydratase
Accession:
QBP85208
Location: 486760-487845
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
FORC81_0445
dTDP-4-dehydrorhamnose reductase
Accession:
QBP85209
Location: 487845-488744
BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 599
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
FORC81_0446
Glucose-1-phosphate thymidylyltransferase
Accession:
QBP85210
Location: 488802-489452
NCBI BlastP on this gene
FORC81_0447
Glucose-1-phosphate thymidylyltransferase
Accession:
QBP85211
Location: 489449-489676
NCBI BlastP on this gene
FORC81_0448
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QBP85212
Location: 489684-490217
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 236
Sequence coverage: 96 %
E-value: 1e-75
NCBI BlastP on this gene
FORC81_0449
hypothetical protein
Accession:
QBP85213
Location: 490284-491252
NCBI BlastP on this gene
FORC81_0450
hypothetical protein
Accession:
QBP85214
Location: 491275-492465
NCBI BlastP on this gene
FORC81_0451
hypothetical protein
Accession:
QBP85215
Location: 492476-493252
NCBI BlastP on this gene
FORC81_0452
glycosyltransferase
Accession:
QBP85216
Location: 493233-494099
NCBI BlastP on this gene
FORC81_0453
N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase
Accession:
QBP85217
Location: 494096-494854
NCBI BlastP on this gene
FORC81_0454
6-phosphogluconate dehydrogenase
Accession:
QBP85218
Location: 494948-496354
NCBI BlastP on this gene
FORC81_0455
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP047876
: Escherichia coli strain LD22-1 chromosome Total score: 3.5 Cumulative Blast bit score: 1442
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QHL82715
Location: 1784585-1785865
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QHL82716
Location: 1785862-1787082
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QHL82717
Location: 1787093-1788487
NCBI BlastP on this gene
wcaM
NAD-dependent epimerase/dehydratase family protein
Accession:
QHL82718
Location: 1788645-1789640
NCBI BlastP on this gene
GUU87_08480
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QHL82719
Location: 1789883-1790776
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QHL82720
Location: 1791145-1792230
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QHL82721
Location: 1792230-1793129
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QHL82722
Location: 1793187-1794065
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QHL82723
Location: 1794070-1794630
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 240
Sequence coverage: 96 %
E-value: 3e-77
NCBI BlastP on this gene
rfbC
oligosaccharide flippase family protein
Accession:
QHL82724
Location: 1794679-1795956
NCBI BlastP on this gene
GUU87_08510
glycosyltransferase
Accession:
QHL82725
Location: 1795949-1797055
NCBI BlastP on this gene
GUU87_08515
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession:
QHL85408
Location: 1797078-1798208
NCBI BlastP on this gene
GUU87_08520
glycosyltransferase
Accession:
QHL82726
Location: 1798213-1799904
NCBI BlastP on this gene
GUU87_08525
O100 family O-antigen polymerase
Accession:
QHL82727
Location: 1799938-1801107
NCBI BlastP on this gene
wzy
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP047665
: Escherichia coli strain LD26-1 chromosome Total score: 3.5 Cumulative Blast bit score: 1442
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QHJ60580
Location: 1350917-1352197
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QHJ60579
Location: 1349700-1350920
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QHJ60578
Location: 1348295-1349689
NCBI BlastP on this gene
wcaM
NAD-dependent epimerase/dehydratase family protein
Accession:
QHJ60577
Location: 1347142-1348137
NCBI BlastP on this gene
GUU86_06615
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QHJ60576
Location: 1346006-1346899
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QHJ60575
Location: 1344552-1345637
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QHJ60574
Location: 1343653-1344552
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QHJ60573
Location: 1342717-1343595
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QHJ60572
Location: 1342152-1342712
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 240
Sequence coverage: 96 %
E-value: 3e-77
NCBI BlastP on this gene
rfbC
oligosaccharide flippase family protein
Accession:
QHJ60571
Location: 1340826-1342103
NCBI BlastP on this gene
GUU86_06585
glycosyltransferase
Accession:
QHJ60570
Location: 1339727-1340833
NCBI BlastP on this gene
GUU86_06580
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession:
QHJ63610
Location: 1338574-1339704
NCBI BlastP on this gene
GUU86_06575
glycosyltransferase
Accession:
QHJ60569
Location: 1336878-1338569
NCBI BlastP on this gene
GUU86_06570
O100 family O-antigen polymerase
Accession:
QHJ60568
Location: 1335675-1336844
NCBI BlastP on this gene
wzy
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP034745
: Escherichia coli strain L100 chromosome Total score: 3.5 Cumulative Blast bit score: 1442
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AZU71320
Location: 1700389-1701669
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AZU71321
Location: 1701666-1702886
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AZU71322
Location: 1702897-1704291
NCBI BlastP on this gene
wcaM
SDR family oxidoreductase
Accession:
AZU71323
Location: 1704449-1705444
NCBI BlastP on this gene
EM855_08155
GalU regulator GalF
Accession:
AZU71324
Location: 1705687-1706580
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
AZU71325
Location: 1706949-1708034
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AZU71326
Location: 1708034-1708933
NCBI BlastP on this gene
EM855_08170
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AZU71327
Location: 1708991-1709869
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AZU71328
Location: 1709874-1710434
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 240
Sequence coverage: 96 %
E-value: 3e-77
NCBI BlastP on this gene
rfbC
flippase
Accession:
AZU73834
Location: 1710483-1711760
NCBI BlastP on this gene
EM855_08185
glycosyltransferase
Accession:
AZU71329
Location: 1711753-1712859
NCBI BlastP on this gene
EM855_08190
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession:
AZU73835
Location: 1712882-1714012
NCBI BlastP on this gene
EM855_08195
glycosyltransferase
Accession:
AZU71330
Location: 1714017-1715708
NCBI BlastP on this gene
EM855_08200
O100 family O-antigen polymerase
Accession:
AZU71331
Location: 1715742-1716911
NCBI BlastP on this gene
EM855_08205
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP034727
: Escherichia coli strain L41-1 chromosome Total score: 3.5 Cumulative Blast bit score: 1442
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AZU75792
Location: 1700389-1701669
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AZU75793
Location: 1701666-1702886
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AZU75794
Location: 1702897-1704291
NCBI BlastP on this gene
wcaM
SDR family oxidoreductase
Accession:
AZU75795
Location: 1704449-1705444
NCBI BlastP on this gene
ELE40_08155
GalU regulator GalF
Accession:
AZU75796
Location: 1705687-1706580
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
AZU75797
Location: 1706949-1708034
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AZU75798
Location: 1708034-1708933
NCBI BlastP on this gene
ELE40_08170
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AZU75799
Location: 1708991-1709869
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AZU75800
Location: 1709874-1710434
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 240
Sequence coverage: 96 %
E-value: 3e-77
NCBI BlastP on this gene
rfbC
flippase
Accession:
AZU78290
Location: 1710483-1711760
NCBI BlastP on this gene
ELE40_08185
glycosyltransferase
Accession:
AZU75801
Location: 1711753-1712859
NCBI BlastP on this gene
ELE40_08190
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession:
AZU78291
Location: 1712882-1714012
NCBI BlastP on this gene
ELE40_08195
glycosyltransferase
Accession:
AZU75802
Location: 1714017-1715708
NCBI BlastP on this gene
ELE40_08200
O100 family O-antigen polymerase
Accession:
AZU75803
Location: 1715742-1716911
NCBI BlastP on this gene
ELE40_08205
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AP021894
: Escherichia coli 2018-10-1CC DNA Total score: 3.5 Cumulative Blast bit score: 1442
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
BBP29943
Location: 1765554-1766774
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
BBP29944
Location: 1766785-1768179
NCBI BlastP on this gene
wcaM
N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, o ctacis-undecaprenol 4-epimerase
Accession:
BBP29945
Location: 1768337-1769332
NCBI BlastP on this gene
gnu
transposase InsE for insertion sequence IS3D
Accession:
BBP29946
Location: 1769459-1769758
NCBI BlastP on this gene
insE4_2
transposase InsF for insertion sequence IS3E
Accession:
BBP29947
Location: 1769755-1770621
NCBI BlastP on this gene
insF5_2
UTP--glucose-1-phosphate uridylyltransferase
Accession:
BBP29948
Location: 1770836-1771729
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase 1
Accession:
BBP29949
Location: 1772098-1773183
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
BBP29950
Location: 1773183-1774082
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase
Accession:
BBP29951
Location: 1774140-1775018
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
BBP29952
Location: 1775023-1775583
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 240
Sequence coverage: 96 %
E-value: 4e-77
NCBI BlastP on this gene
rfbC
teichoic acid transporter
Accession:
BBP29953
Location: 1775632-1776909
NCBI BlastP on this gene
VEGS09_16540
glycosyl transferase
Accession:
BBP29954
Location: 1776902-1778008
NCBI BlastP on this gene
VEGS09_16550
UDP-N-acetyl glucosamine 2-epimerase
Accession:
BBP29955
Location: 1778016-1779161
NCBI BlastP on this gene
nfrC
dTDP-rhamnosyl transferase RfbG
Accession:
BBP29956
Location: 1779166-1780059
NCBI BlastP on this gene
rfbG
hypothetical protein
Accession:
BBP29957
Location: 1780272-1780718
NCBI BlastP on this gene
VEGS09_16580
hypothetical protein
Accession:
BBP29958
Location: 1781120-1782019
NCBI BlastP on this gene
VEGS09_16590
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AB812064
: Escherichia coli genes for O-antigen biosynthetic locus Total score: 3.5 Cumulative Blast bit score: 1441
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession:
BAQ01767
Location: 1-906
NCBI BlastP on this gene
wcaM
UDP-N-acetylglucosamine 4-epimerase
Accession:
BAQ01768
Location: 1064-2059
NCBI BlastP on this gene
gne
transposase of IS3
Accession:
BAQ01769
Location: 2177-2485
NCBI BlastP on this gene
BAQ01769
transposase of IS3
Accession:
BAQ01770
Location: 2482-3348
NCBI BlastP on this gene
BAQ01770
UTP-glucose-1-phosphate uridylyltransferase
Accession:
BAQ01771
Location: 3563-4456
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
BAQ01772
Location: 4825-5910
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
BAQ01773
Location: 5910-6809
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
BAQ01774
Location: 6867-7745
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
BAQ01775
Location: 7732-8310
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 241
Sequence coverage: 96 %
E-value: 2e-77
NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession:
BAQ01776
Location: 8344-9636
NCBI BlastP on this gene
wzx
putative glycosyltransferase
Accession:
BAQ01777
Location: 9629-10735
NCBI BlastP on this gene
BAQ01777
putative UDP-N-acetylglucosamine 2-epimerase
Accession:
BAQ01778
Location: 10743-11888
NCBI BlastP on this gene
BAQ01778
putative glycosyltransferase
Accession:
BAQ01779
Location: 11854-12786
NCBI BlastP on this gene
BAQ01779
O-antigen polymerase
Accession:
BAQ01780
Location: 12805-13845
NCBI BlastP on this gene
wzy
putative glycosyltransferase
Accession:
BAQ01781
Location: 13847-14746
NCBI BlastP on this gene
BAQ01781
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP048107
: Escherichia coli strain 201609 chromosome Total score: 3.5 Cumulative Blast bit score: 1440
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QHS41259
Location: 2079374-2080654
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QHS41260
Location: 2080651-2081871
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QHS41261
Location: 2081882-2083276
NCBI BlastP on this gene
wcaM
N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase
Accession:
QHS41262
Location: 2083434-2084429
NCBI BlastP on this gene
GWK05_09775
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QHS41263
Location: 2084672-2085565
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QHS41264
Location: 2085934-2087019
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 610
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QHS41265
Location: 2087019-2087918
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QHS41266
Location: 2087976-2088854
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QHS41267
Location: 2088859-2089419
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 240
Sequence coverage: 96 %
E-value: 3e-77
NCBI BlastP on this gene
rfbC
O154 family O-antigen flippase
Accession:
QHS41268
Location: 2089453-2090745
NCBI BlastP on this gene
wzx
glycosyltransferase family 4 protein
Accession:
QHS41269
Location: 2090738-2091844
NCBI BlastP on this gene
GWK05_09810
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession:
QHS43986
Location: 2091867-2092997
NCBI BlastP on this gene
wecB
glycosyltransferase
Accession:
QHS41270
Location: 2093002-2093853
NCBI BlastP on this gene
GWK05_09820
IS5-like element IS903B family transposase
Accession:
QHS41271
Location: 2093871-2094839
NCBI BlastP on this gene
GWK05_09825
O154 family O-antigen polymerase
Accession:
QHS41272
Location: 2094980-2096020
NCBI BlastP on this gene
wzy
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP042606
: Escherichia coli strain NCYU-29-19 chromosome Total score: 3.5 Cumulative Blast bit score: 1438
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Location: 3549270-3550747
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Location: 3547620-3548899
wcaK
colanic acid biosynthesis glycosyl transferase
Accession:
FTV94_17900
Location: 3547006-3547623
NCBI BlastP on this gene
FTV94_17900
glycosyltransferase
Accession:
QED68539
Location: 3546405-3546911
NCBI BlastP on this gene
FTV94_17895
UTP--glucose-1-phosphate uridylyltransferase GalF
Location: 3543933-3544825
galF
dTDP-glucose 4,6-dehydratase
Accession:
QED68538
Location: 3542475-3543560
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QED68537
Location: 3541576-3542475
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QED68536
Location: 3540643-3541518
BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 596
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QED68535
Location: 3540102-3540635
BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 241
Sequence coverage: 96 %
E-value: 7e-78
NCBI BlastP on this gene
rfbC
oligosaccharide flippase family protein
Accession:
QED68534
Location: 3539324-3540091
NCBI BlastP on this gene
FTV94_17860
hypothetical protein
Accession:
QED68533
Location: 3538828-3539346
NCBI BlastP on this gene
FTV94_17855
hypothetical protein
Accession:
QED68532
Location: 3537957-3538724
NCBI BlastP on this gene
FTV94_17850
EpsG family protein
Accession:
QED68531
Location: 3536886-3537860
NCBI BlastP on this gene
FTV94_17845
glycosyltransferase family 2 protein
Accession:
QED68530
Location: 3536695-3536880
NCBI BlastP on this gene
FTV94_17840
hypothetical protein
Accession:
QED68529
Location: 3536105-3536626
NCBI BlastP on this gene
FTV94_17835
hypothetical protein
Accession:
FTV94_17830
Location: 3535230-3536112
NCBI BlastP on this gene
FTV94_17830
glycosyltransferase family 4 protein
Accession:
FTV94_17825
Location: 3534124-3535233
NCBI BlastP on this gene
FTV94_17825
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP040269
: Escherichia coli strain 1500 chromosome Total score: 3.5 Cumulative Blast bit score: 1437
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Accession:
QES59465
Location: 77039-78517
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QES59466
Location: 78889-80169
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QES59467
Location: 80166-81386
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QES59468
Location: 81397-82791
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QES59469
Location: 82966-83859
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QES59470
Location: 84232-85317
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QES59471
Location: 85317-86216
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QES59472
Location: 86274-87149
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 591
Sequence coverage: 99 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QES59473
Location: 87157-87717
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 238
Sequence coverage: 97 %
E-value: 4e-76
NCBI BlastP on this gene
rfbC
glycosyltransferase family 2 protein
Accession:
QES59474
Location: 87714-88628
NCBI BlastP on this gene
EST53_00415
glycosyltransferase family 4 protein
Accession:
QES59475
Location: 88630-89673
NCBI BlastP on this gene
EST53_00420
glycosyltransferase family 2 protein
Accession:
QES59476
Location: 89670-90452
NCBI BlastP on this gene
EST53_00425
hypothetical protein
Accession:
QES59477
Location: 90418-91641
NCBI BlastP on this gene
EST53_00430
glycosyltransferase family 4 protein
Accession:
QES59478
Location: 91851-92909
NCBI BlastP on this gene
EST53_00435
O48 family O-antigen polymerase
Accession:
QES59479
Location: 92906-94027
NCBI BlastP on this gene
wzy
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP036202
: Escherichia coli strain L725 chromosome Total score: 3.5 Cumulative Blast bit score: 1437
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Accession:
QBG62440
Location: 3348343-3349821
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QBG62441
Location: 3350386-3351666
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QBG62442
Location: 3351663-3352883
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QBG62443
Location: 3352894-3354288
NCBI BlastP on this gene
wcaM
GalU regulator GalF
Accession:
QBG62444
Location: 3354463-3355356
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QBG62445
Location: 3355729-3356814
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QBG62446
Location: 3356814-3357713
NCBI BlastP on this gene
D9K49_16175
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QBG62447
Location: 3357771-3358649
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QBG62448
Location: 3358654-3359193
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 240
Sequence coverage: 100 %
E-value: 3e-77
NCBI BlastP on this gene
rfbC
nucleotide sugar dehydrogenase
Accession:
QBG62449
Location: 3359238-3360542
NCBI BlastP on this gene
D9K49_16190
Gfo/Idh/MocA family oxidoreductase
Accession:
QBG62450
Location: 3360544-3361602
NCBI BlastP on this gene
D9K49_16195
N-acetyltransferase
Accession:
QBG62451
Location: 3361629-3362207
NCBI BlastP on this gene
D9K49_16200
DegT/DnrJ/EryC1/StrS family aminotransferase
Accession:
QBG62452
Location: 3362210-3363310
NCBI BlastP on this gene
D9K49_16205
O180 family O-antigen flippase
Accession:
QBG62453
Location: 3363307-3364566
NCBI BlastP on this gene
wzx
oligosaccharide repeat unit polymerase
Accession:
QBG62454
Location: 3364600-3365931
NCBI BlastP on this gene
D9K49_16215
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP010219
: Escherichia coli strain M18 Total score: 3.5 Cumulative Blast bit score: 1437
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
APL32128
Location: 934307-935785
NCBI BlastP on this gene
RG62_04785
colanic acid biosynthesis protein
Accession:
APL32127
Location: 932462-933742
NCBI BlastP on this gene
RG62_04780
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
APL32126
Location: 931245-932465
NCBI BlastP on this gene
RG62_04775
colanic acid biosynthesis protein
Accession:
APL32125
Location: 929840-931234
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
APL32124
Location: 928772-929665
NCBI BlastP on this gene
RG62_04765
dTDP-glucose 4,6-dehydratase
Accession:
APL32123
Location: 927314-928399
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
RG62_04760
dTDP-4-dehydrorhamnose reductase
Accession:
APL32122
Location: 926415-927314
NCBI BlastP on this gene
RG62_04755
glucose-1-phosphate thymidylyltransferase
Accession:
APL32121
Location: 925479-926357
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
RG62_04750
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
APL32120
Location: 924935-925474
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 240
Sequence coverage: 100 %
E-value: 3e-77
NCBI BlastP on this gene
RG62_04745
UDP-N-acetyl-D-glucosamine dehydrogenase
Accession:
APL32119
Location: 923586-924890
NCBI BlastP on this gene
RG62_04740
oxidoreductase
Accession:
APL32118
Location: 922526-923584
NCBI BlastP on this gene
RG62_04735
serine acetyltransferase
Accession:
APL32117
Location: 921921-922499
NCBI BlastP on this gene
RG62_04730
aminotransferase DegT
Accession:
APL32116
Location: 920818-921918
NCBI BlastP on this gene
RG62_04725
hypothetical protein
Accession:
APL32115
Location: 919562-920821
NCBI BlastP on this gene
RG62_04720
hypothetical protein
Accession:
APL32114
Location: 918197-919528
NCBI BlastP on this gene
RG62_04715
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AB812020
: Escherichia coli genes for O-antigen biosynthetic locus Total score: 3.5 Cumulative Blast bit score: 1436
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession:
BAQ01015
Location: 3-902
NCBI BlastP on this gene
wcaM
UDP-N-acetylglucosamine 4-epimerase
Accession:
BAQ01016
Location: 1060-2055
NCBI BlastP on this gene
gne
UTP-glucose-1-phosphate uridylyltransferase
Accession:
BAQ01017
Location: 2298-3191
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
BAQ01018
Location: 3564-4649
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 604
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
BAQ01019
Location: 4649-5548
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
BAQ01020
Location: 5606-6484
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
BAQ01021
Location: 6471-7031
BlastP hit with rmlC
Percentage identity: 65 %
BlastP bit score: 242
Sequence coverage: 100 %
E-value: 4e-78
NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession:
BAQ01022
Location: 7105-8664
NCBI BlastP on this gene
wzx
putative glycosyltransferase
Accession:
BAQ01023
Location: 8664-9530
NCBI BlastP on this gene
BAQ01023
O-antigen polymerase
Accession:
BAQ01024
Location: 9540-10577
NCBI BlastP on this gene
wzy
putative glycosyltransferase
Accession:
BAQ01025
Location: 10577-11404
NCBI BlastP on this gene
BAQ01025
putative glycosyltransferase
Accession:
BAQ01026
Location: 11406-12158
NCBI BlastP on this gene
BAQ01026
putative glycosyltransferase
Accession:
BAQ01027
Location: 12155-13267
NCBI BlastP on this gene
BAQ01027
putative sulfatase
Accession:
BAQ01028
Location: 13264-14889
NCBI BlastP on this gene
BAQ01028
Query: Escherichia coli strain O146 O antigen gene cluster, complete
MF322753
: Shigella boydii strain 07-6597 O-antigen gene cluster Total score: 3.5 Cumulative Blast bit score: 1435
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AXC25116
Location: 1-894
NCBI BlastP on this gene
galF
hypothetical protein
Accession:
AXC25117
Location: 931-1194
NCBI BlastP on this gene
AXC25117
dTDP-glucose 4,6-dehydratase
Accession:
AXC25118
Location: 1266-2351
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 603
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AXC25119
Location: 2351-3250
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase 1
Accession:
AXC25120
Location: 3308-4186
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA1
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AXC25121
Location: 4191-4730
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 240
Sequence coverage: 100 %
E-value: 3e-77
NCBI BlastP on this gene
rfbC
UDP-N-acetyl-D-glucosamine 6-dehydrogenase
Accession:
AXC25122
Location: 4775-6079
NCBI BlastP on this gene
wbpA
glucose--fructose oxidoreductase precursor
Accession:
AXC25123
Location: 6081-7139
NCBI BlastP on this gene
gfo
UDP-2-acetamido-3-amino-2, 3-dideoxy-D-glucuronate N-acetyltransferase
Accession:
AXC25124
Location: 7166-7744
NCBI BlastP on this gene
wbpD
UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase
Accession:
AXC25125
Location: 7747-8847
NCBI BlastP on this gene
wbpE
colanic acid exporter
Accession:
AXC25126
Location: 8844-10103
NCBI BlastP on this gene
AXC25126
hypothetical protein
Accession:
AXC25127
Location: 10137-11468
NCBI BlastP on this gene
AXC25127
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP024131
: Escherichia coli strain 14EC007 chromosome Total score: 3.5 Cumulative Blast bit score: 1435
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
AUK16243
Location: 1826474-1827952
NCBI BlastP on this gene
CR535_09400
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AUK16244
Location: 1828228-1829508
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AUK16245
Location: 1829505-1830725
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AUK16246
Location: 1830736-1832130
NCBI BlastP on this gene
CR535_09415
GalU regulator GalF
Accession:
AUK16247
Location: 1832305-1833198
NCBI BlastP on this gene
CR535_09420
hypothetical protein
Accession:
AUK16248
Location: 1833235-1833498
NCBI BlastP on this gene
CR535_09425
dTDP-glucose 4,6-dehydratase
Accession:
AUK16249
Location: 1833570-1834655
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 603
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AUK16250
Location: 1834655-1835554
NCBI BlastP on this gene
CR535_09435
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AUK16251
Location: 1835612-1836490
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CR535_09440
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AUK16252
Location: 1836495-1837034
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 240
Sequence coverage: 100 %
E-value: 3e-77
NCBI BlastP on this gene
rfbC
nucleotide sugar dehydrogenase
Accession:
AUK16253
Location: 1837079-1838383
NCBI BlastP on this gene
CR535_09450
gfo/Idh/MocA family oxidoreductase
Accession:
AUK16254
Location: 1838385-1839443
NCBI BlastP on this gene
CR535_09455
N-acetyltransferase
Accession:
AUK16255
Location: 1839470-1840048
NCBI BlastP on this gene
CR535_09460
DegT/DnrJ/EryC1/StrS family aminotransferase
Accession:
AUK16256
Location: 1840051-1841151
NCBI BlastP on this gene
CR535_09465
O180 family O-antigen flippase
Accession:
AUK16257
Location: 1841148-1842407
NCBI BlastP on this gene
CR535_09470
hypothetical protein
Accession:
AUK16258
Location: 1842441-1843772
NCBI BlastP on this gene
CR535_09475
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KJ710508
: Escherichia coli strain U 8-41 serotype O48:K-:H- O-antigen gene cluster Total score: 3.5 Cumulative Blast bit score: 1434
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-glucose 4,6-dehydratase
Accession:
AIG62375
Location: 108-1193
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 610
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
AIG62376
Location: 1193-2092
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 587
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase 1
Accession:
AIG62377
Location: 2150-3019
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AIG62378
Location: 3034-3594
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 237
Sequence coverage: 97 %
E-value: 6e-76
NCBI BlastP on this gene
rmlC
glycosyl transferase
Accession:
AIG62379
Location: 3591-4505
NCBI BlastP on this gene
epsE
N-acetylgalactosamine-N,
Accession:
AIG62380
Location: 4604-5551
NCBI BlastP on this gene
pglJ
rhamnosyltransferase
Accession:
AIG62381
Location: 5548-6330
NCBI BlastP on this gene
wbbL
O-antigen flippase
Accession:
AIG62382
Location: 6296-7519
NCBI BlastP on this gene
wzx
glycosyl transferases family 1
Accession:
AIG62383
Location: 7729-8787
NCBI BlastP on this gene
AIG62383
O-antigen polymerase
Accession:
AIG62384
Location: 8784-9905
NCBI BlastP on this gene
wzy
Query: Escherichia coli strain O146 O antigen gene cluster, complete
JQ751058
: Escherichia coli strain 86-381 serogroup O180 O-antigen gene cluster Total score: 3.5 Cumulative Blast bit score: 1434
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-D-glucose 4,6-dehydratase
Accession:
AFN02890
Location: 107-1192
BlastP hit with rmlB
Percentage identity: 95 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession:
AFN02891
Location: 1192-2091
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
AFN02892
Location: 2149-3027
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-6-deoxy-L-mannose-dehydrogenase
Accession:
AFN02893
Location: 3032-3571
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 240
Sequence coverage: 100 %
E-value: 3e-77
NCBI BlastP on this gene
rmlC
UDP glucose 6-dehydrogenase##
Accession:
AFN02894
Location: 3616-4920
NCBI BlastP on this gene
wbpA
oxidoreductase
Accession:
AFN02895
Location: 4922-5980
NCBI BlastP on this gene
wbpB
acetyltransferase
Accession:
AFN02896
Location: 6007-6585
NCBI BlastP on this gene
wbpD
aminotransferase
Accession:
AFN02897
Location: 6588-7688
NCBI BlastP on this gene
wbpE
O unit flippase
Accession:
AFN02898
Location: 7685-8944
NCBI BlastP on this gene
wzx
O antigen polymerase
Accession:
AFN02899
Location: 9096-10310
NCBI BlastP on this gene
wzy
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AB812077
: Escherichia coli genes for O-antigen biosynthetic locus Total score: 3.5 Cumulative Blast bit score: 1434
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession:
BAQ01971
Location: 2-907
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession:
BAQ01972
Location: 1070-1975
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
BAQ01973
Location: 2348-3433
BlastP hit with rmlB
Percentage identity: 95 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
BAQ01974
Location: 3433-4332
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
BAQ01975
Location: 4390-5268
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
BAQ01976
Location: 5273-5812
BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 240
Sequence coverage: 100 %
E-value: 3e-77
NCBI BlastP on this gene
rmlC
putative nucleotide sugar dehydrogenase
Accession:
BAQ01977
Location: 5857-7161
NCBI BlastP on this gene
BAQ01977
putative oxidoreductase
Accession:
BAQ01978
Location: 7163-8221
NCBI BlastP on this gene
BAQ01978
putative acetyltransferase
Accession:
BAQ01979
Location: 8248-8826
NCBI BlastP on this gene
BAQ01979
putative aminotransferase
Accession:
BAQ01980
Location: 8823-9929
NCBI BlastP on this gene
BAQ01980
O-antigen flippase
Accession:
BAQ01981
Location: 9926-11185
NCBI BlastP on this gene
wzx
O-antigen polymerase
Accession:
BAQ01982
Location: 11219-12550
NCBI BlastP on this gene
wzy
Query: Escherichia coli strain O146 O antigen gene cluster, complete
LR134340
: Escherichia coli strain NCTC11133 genome assembly, chromosome: 1. Total score: 3.5 Cumulative Blast bit score: 1430
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
putative flippase (Putative export protein)
Accession:
VEF97142
Location: 2672067-2673545
NCBI BlastP on this gene
wzxC
Colanic acid biosynthesis protein
Accession:
VEF97141
Location: 2670325-2671605
NCBI BlastP on this gene
wcaK
putative colanic acid biosynthesis glycosyltransferase
Accession:
VEF97140
Location: 2669108-2670328
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein
Accession:
VEF97139
Location: 2667703-2669097
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase subunit GalF
Accession:
VEF97138
Location: 2666635-2667528
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase rmlB
Accession:
VEF97137
Location: 2665177-2666262
BlastP hit with rmlB
Percentage identity: 95 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
VEF97136
Location: 2664278-2665177
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
VEF97135
Location: 2663342-2664220
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
VEF97134
Location: 2662789-2663337
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 236
Sequence coverage: 96 %
E-value: 9e-76
NCBI BlastP on this gene
rfbC
glycosyl transferase group 2 family protein
Accession:
VEF97133
Location: 2661750-2662718
NCBI BlastP on this gene
NCTC11133_02553
glycosyl transferase family protein
Accession:
VEF97132
Location: 2661010-2661753
NCBI BlastP on this gene
wbbL
Uncharacterised protein
Accession:
VEF97131
Location: 2659981-2660994
NCBI BlastP on this gene
NCTC11133_02551
VI polysaccharide biosynthesis protein
Accession:
VEF97130
Location: 2658592-2659866
NCBI BlastP on this gene
vipA
VI polysaccharide biosynthesis protein
Accession:
VEF97129
Location: 2657546-2658577
NCBI BlastP on this gene
vipB
Uncharacterised protein
Accession:
VEF97128
Location: 2656695-2657447
NCBI BlastP on this gene
NCTC11133_02548
integral membrane protein MviN
Accession:
VEF97127
Location: 2655454-2656695
NCBI BlastP on this gene
NCTC11133_02547
Query: Escherichia coli strain O146 O antigen gene cluster, complete
GU068044
: Escherichia coli strain E1020-72 serogroup O158 O antigen gene cluster Total score: 3.5 Cumulative Blast bit score: 1426
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
Gne
Accession:
ADN43865
Location: 143-1252
NCBI BlastP on this gene
gne
RmlB
Accession:
ADN43866
Location: 1256-2341
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
RmlD
Accession:
ADN43867
Location: 2341-3240
NCBI BlastP on this gene
rmlD
RmlA
Accession:
ADN43868
Location: 3298-4176
BlastP hit with rmlA
Percentage identity: 96 %
BlastP bit score: 585
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
RmlC
Accession:
ADN43869
Location: 4181-4723
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 236
Sequence coverage: 99 %
E-value: 1e-75
NCBI BlastP on this gene
rmlC
Wzx
Accession:
ADN43870
Location: 5103-6356
NCBI BlastP on this gene
wzx
Wzy
Accession:
ADN43871
Location: 6358-7509
NCBI BlastP on this gene
wzy
WcmQ
Accession:
ADN43872
Location: 7499-8569
NCBI BlastP on this gene
wcmQ
WcmR
Accession:
ADN43873
Location: 8584-9312
NCBI BlastP on this gene
wcmR
WcmS
Accession:
ADN43874
Location: 9315-10448
NCBI BlastP on this gene
wcmS
Query: Escherichia coli strain O146 O antigen gene cluster, complete
FJ940774
: Escherichia coli serogroup O35 O-antigen gene cluster Total score: 3.5 Cumulative Blast bit score: 1317
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession:
ACV67279
Location: 745-1830
NCBI BlastP on this gene
rmlB
RmlD
Accession:
ACV67280
Location: 1830-2729
BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 589
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
RmlA
Accession:
ACV67281
Location: 2787-3665
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
RmlC
Accession:
ACV67282
Location: 3668-4213
NCBI BlastP on this gene
rmlC
Gna
Accession:
ACV67283
Location: 4244-5518
NCBI BlastP on this gene
gna
Gne
Accession:
ACV67284
Location: 5543-6565
NCBI BlastP on this gene
gne
Wzx
Accession:
ACV67285
Location: 6678-7883
NCBI BlastP on this gene
wzx
WbpS
Accession:
ACV67286
Location: 7871-9715
NCBI BlastP on this gene
wbpS
WcnX
Accession:
ACV67287
Location: 9712-10461
NCBI BlastP on this gene
wcnX
WcnY
Accession:
ACV67288
Location: 10463-11329
BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 140
Sequence coverage: 97 %
E-value: 2e-35
NCBI BlastP on this gene
wcnY
Wzy
Accession:
ACV67289
Location: 11326-12348
NCBI BlastP on this gene
wzy
WcnZ
Accession:
ACV67290
Location: 12370-13155
NCBI BlastP on this gene
wcnZ
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP010170
: Escherichia coli strain H6 Total score: 3.5 Cumulative Blast bit score: 966
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession:
APK66350
Location: 2001894-2003174
NCBI BlastP on this gene
RG48_09825
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
APK66351
Location: 2003171-2004391
NCBI BlastP on this gene
RG48_09830
colanic acid biosynthesis protein
Accession:
APK66352
Location: 2004402-2005796
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
APK66353
Location: 2005971-2006864
NCBI BlastP on this gene
RG48_09840
dTDP-glucose 4,6-dehydratase
Accession:
APK66354
Location: 2007237-2008322
NCBI BlastP on this gene
RG48_09845
dTDP-4-dehydrorhamnose reductase
Accession:
APK66355
Location: 2008322-2009221
NCBI BlastP on this gene
RG48_09850
glucose-1-phosphate thymidylyltransferase
Accession:
APK66356
Location: 2009280-2010158
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
RG48_09855
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
APK66357
Location: 2010163-2010708
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
RG48_09860
transporter
Accession:
APK66358
Location: 2010724-2011980
NCBI BlastP on this gene
RG48_09865
glycosyl transferase family 2
Accession:
APK66359
Location: 2012010-2012900
BlastP hit with wbwV
Percentage identity: 34 %
BlastP bit score: 135
Sequence coverage: 88 %
E-value: 2e-33
NCBI BlastP on this gene
RG48_09870
glycosyl transferase
Accession:
APK66360
Location: 2012893-2013798
NCBI BlastP on this gene
RG48_09875
polymerase
Accession:
APK66361
Location: 2013819-2014967
NCBI BlastP on this gene
RG48_09880
translocase
Accession:
APK68962
Location: 2014992-2015345
NCBI BlastP on this gene
RG48_09885
protein rfbJ
Accession:
APK66362
Location: 2015408-2016334
NCBI BlastP on this gene
RG48_09890
hypothetical protein
Accession:
APK66363
Location: 2017773-2018132
NCBI BlastP on this gene
RG48_09905
6-phosphogluconate dehydrogenase
Accession:
APK66364
Location: 2018241-2019647
NCBI BlastP on this gene
RG48_09910
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP010169
: Escherichia coli strain H5 Total score: 3.5 Cumulative Blast bit score: 966
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession:
APK63786
Location: 4187417-4188697
NCBI BlastP on this gene
RG47_20750
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
APK63785
Location: 4186200-4187420
NCBI BlastP on this gene
RG47_20745
colanic acid biosynthesis protein
Accession:
APK63784
Location: 4184795-4186189
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
APK63783
Location: 4183727-4184620
NCBI BlastP on this gene
RG47_20735
dTDP-glucose 4,6-dehydratase
Accession:
APK63782
Location: 4182269-4183354
NCBI BlastP on this gene
RG47_20730
dTDP-4-dehydrorhamnose reductase
Accession:
APK63781
Location: 4181370-4182269
NCBI BlastP on this gene
RG47_20725
glucose-1-phosphate thymidylyltransferase
Accession:
APK63780
Location: 4180433-4181311
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
RG47_20720
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
APK63779
Location: 4179883-4180428
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
RG47_20715
transporter
Accession:
APK63778
Location: 4178611-4179867
NCBI BlastP on this gene
RG47_20710
glycosyl transferase family 2
Accession:
APK63777
Location: 4177691-4178581
BlastP hit with wbwV
Percentage identity: 34 %
BlastP bit score: 135
Sequence coverage: 88 %
E-value: 2e-33
NCBI BlastP on this gene
RG47_20705
glycosyl transferase
Accession:
APK63776
Location: 4176793-4177698
NCBI BlastP on this gene
RG47_20700
polymerase
Accession:
APK63775
Location: 4175624-4176772
NCBI BlastP on this gene
RG47_20695
translocase
Accession:
APK64524
Location: 4175246-4175599
NCBI BlastP on this gene
RG47_20690
protein rfbJ
Accession:
APK63774
Location: 4174257-4175183
NCBI BlastP on this gene
RG47_20685
hypothetical protein
Accession:
APK63773
Location: 4172459-4172818
NCBI BlastP on this gene
RG47_20670
6-phosphogluconate dehydrogenase
Accession:
APK63772
Location: 4170944-4172350
NCBI BlastP on this gene
RG47_20665
Query: Escherichia coli strain O146 O antigen gene cluster, complete
LS483303
: Escherichia coli strain NCTC9967 genome assembly, chromosome: 1. Total score: 3.5 Cumulative Blast bit score: 965
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
Colanic acid biosynthesis protein
Accession:
SQE43622
Location: 1725384-1726664
NCBI BlastP on this gene
wcaK
putative colanic acid biosynthesis glycosyltransferase
Accession:
SQE43623
Location: 1726661-1727881
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein
Accession:
SQE43624
Location: 1727892-1729286
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase subunit GalF
Accession:
SQE43625
Location: 1729461-1730354
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase rmlB
Accession:
SQE43626
Location: 1730727-1731812
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
SQE43627
Location: 1731812-1732711
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
SQE43628
Location: 1732770-1733648
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase RfbC
Accession:
SQE43629
Location: 1733653-1734198
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
putative O-antigen transporter
Accession:
SQE43630
Location: 1734214-1735470
NCBI BlastP on this gene
wzxC_2
glycosyl transferase family protein
Accession:
SQE43631
Location: 1735500-1736390
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 134
Sequence coverage: 88 %
E-value: 2e-33
NCBI BlastP on this gene
NCTC9967_01675
Spore coat polysaccharide biosynthesis protein spsA
Accession:
SQE43632
Location: 1736419-1737288
NCBI BlastP on this gene
spsA
Uncharacterised protein
Accession:
SQE43633
Location: 1737309-1738457
NCBI BlastP on this gene
NCTC9967_01677
Uncharacterised protein
Accession:
SQE43634
Location: 1739311-1739469
NCBI BlastP on this gene
NCTC9967_01678
6-phosphogluconate dehydrogenase
Accession:
SQE43635
Location: 1739560-1740966
NCBI BlastP on this gene
gnd
UDP-glucose 6-dehydrogenase
Accession:
SQE43636
Location: 1741215-1742381
NCBI BlastP on this gene
ugd
regulator of length of O-antigen component of lipopolysaccharide chains
Accession:
SQE43637
Location: 1742528-1743505
NCBI BlastP on this gene
cld
Query: Escherichia coli strain O146 O antigen gene cluster, complete
EU296424
: Escherichia coli serogroup O129 O-antigen gene cluster Total score: 3.5 Cumulative Blast bit score: 965
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession:
ACD37174
Location: 1139-2224
NCBI BlastP on this gene
rmlB
RmlD
Accession:
ACD37175
Location: 2224-3123
NCBI BlastP on this gene
rmlD
RmlA
Accession:
ACD37176
Location: 3182-4060
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
RmlC
Accession:
ACD37177
Location: 4065-4610
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rmlC
Wzx
Accession:
ACD37178
Location: 4626-5882
NCBI BlastP on this gene
wzx
RfbF
Accession:
ACD37179
Location: 5912-6802
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 134
Sequence coverage: 88 %
E-value: 2e-33
NCBI BlastP on this gene
rfbF
RfbG
Accession:
ACD37180
Location: 6795-7700
NCBI BlastP on this gene
rfbG
Wzy
Accession:
ACD37181
Location: 7721-8869
NCBI BlastP on this gene
wzy
Query: Escherichia coli strain O146 O antigen gene cluster, complete
EU296423
: Escherichia coli serogroup O135 O-antigen gene cluster Total score: 3.5 Cumulative Blast bit score: 965
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession:
ACD37166
Location: 1138-2223
NCBI BlastP on this gene
rmlB
RmlD
Accession:
ACD37167
Location: 2223-3122
NCBI BlastP on this gene
rmlD
RmlA
Accession:
ACD37168
Location: 3181-4059
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
RmlC
Accession:
ACD37169
Location: 4064-4609
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rmlC
Wzx
Accession:
ACD37170
Location: 4625-5881
NCBI BlastP on this gene
wzx
RfbF
Accession:
ACD37171
Location: 5911-6801
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 134
Sequence coverage: 88 %
E-value: 2e-33
NCBI BlastP on this gene
rfbF
RfbG
Accession:
ACD37172
Location: 6794-7699
NCBI BlastP on this gene
rfbG
Wzy
Accession:
ACD37173
Location: 7720-8868
NCBI BlastP on this gene
wzy
Query: Escherichia coli strain O146 O antigen gene cluster, complete
EU296422
: Escherichia coli serogroup O13 O-antigen gene cluster Total score: 3.5 Cumulative Blast bit score: 965
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession:
ACD37158
Location: 1138-2223
NCBI BlastP on this gene
rmlB
RmlD
Accession:
ACD37159
Location: 2223-3122
NCBI BlastP on this gene
rmlD
RmlA
Accession:
ACD37160
Location: 3181-4059
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
RmlC
Accession:
ACD37161
Location: 4064-4609
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rmlC
Wzx
Accession:
ACD37162
Location: 4625-5881
NCBI BlastP on this gene
wzx
RfbF
Accession:
ACD37163
Location: 5911-6801
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 134
Sequence coverage: 88 %
E-value: 2e-33
NCBI BlastP on this gene
rfbF
RfbG
Accession:
ACD37164
Location: 6794-7699
NCBI BlastP on this gene
rfbG
Wzy
Accession:
ACD37165
Location: 7720-8868
NCBI BlastP on this gene
wzy
Query: Escherichia coli strain O146 O antigen gene cluster, complete
351. :
CP015229
Escherichia coli strain 06-00048 chromosome Total score: 4.0 Cumulative Blast bit score: 1791
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid transporter
Accession:
ANO89826
Location: 2724117-2725595
NCBI BlastP on this gene
GJ11_14075
colanic acid biosynthesis protein
Accession:
ANO89825
Location: 2722561-2723841
NCBI BlastP on this gene
GJ11_14070
colanic acid biosynthesis protein
Accession:
ANO89824
Location: 2721344-2722564
NCBI BlastP on this gene
GJ11_14065
colanic acid biosynthesis protein
Accession:
ANO89823
Location: 2719939-2721333
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
ANO89822
Location: 2718871-2719764
NCBI BlastP on this gene
GJ11_14055
dTDP-glucose 4,6-dehydratase
Accession:
ANO89821
Location: 2717414-2718499
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 609
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
GJ11_14050
dTDP-4-dehydrorhamnose reductase
Accession:
ANO89820
Location: 2716515-2717414
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
GJ11_14045
glucose-1-phosphate thymidylyltransferase
Accession:
ANO89819
Location: 2715579-2716457
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
GJ11_14040
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ANO89818
Location: 2715032-2715574
NCBI BlastP on this gene
GJ11_14035
matE family protein
Accession:
ANO89817
Location: 2713770-2715014
NCBI BlastP on this gene
GJ11_14030
hypothetical protein
Accession:
ANO89816
Location: 2713063-2713773
NCBI BlastP on this gene
GJ11_14025
glycosyl transferase 2 family protein
Accession:
ANO89815
Location: 2712247-2713056
NCBI BlastP on this gene
GJ11_14020
hypothetical protein
Accession:
ANO89814
Location: 2710980-2712236
NCBI BlastP on this gene
GJ11_14015
mannosyltransferase
Accession:
ANO89813
Location: 2709952-2710980
NCBI BlastP on this gene
GJ11_14010
GDP-mannose 4,6-dehydratase
Accession:
ANO89812
Location: 2708809-2709933
NCBI BlastP on this gene
GJ11_14005
352. :
AY948196
Shigella boydii serogroup 18 O antigen gene cluster Total score: 4.0 Cumulative Blast bit score: 1791
RmlB
Accession:
AAY23333
Location: 1150-2235
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
RmlD
Accession:
AAY23334
Location: 2235-3134
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
RmlA
Accession:
AAY23335
Location: 3192-4070
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
RmlC
Accession:
AAY23336
Location: 4075-4632
NCBI BlastP on this gene
rmlC
Wzx
Accession:
AAY23337
Location: 5978-7195
NCBI BlastP on this gene
wzx
WbwX
Accession:
AAY23338
Location: 7313-8296
NCBI BlastP on this gene
wbwX
Wzy
Accession:
AAY23339
Location: 8380-9489
NCBI BlastP on this gene
wzy
WbwY
Accession:
AAY23340
Location: 9500-10396
NCBI BlastP on this gene
wbwY
WbwZ
Accession:
AAY23341
Location: 10393-11502
NCBI BlastP on this gene
wbwZ
353. :
CP006834
Escherichia coli APEC O2-211 chromosome Total score: 4.0 Cumulative Blast bit score: 1790
colanic acid exporter
Accession:
AKK39455
Location: 3256368-3257846
NCBI BlastP on this gene
APECO2_12640
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AKK39454
Location: 3254428-3255708
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AKK39453
Location: 3253211-3254431
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AKK39452
Location: 3251806-3253200
NCBI BlastP on this gene
APECO2_12625
GalU regulator GalF
Accession:
AKK39451
Location: 3250738-3251631
NCBI BlastP on this gene
galF
hypothetical protein
Accession:
AXF92050
Location: 3250438-3250701
NCBI BlastP on this gene
APECO2_26925
dTDP-glucose 4,6-dehydratase
Accession:
AKK39449
Location: 3249280-3250365
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 607
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AKK39448
Location: 3248381-3249280
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
APECO2_12605
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AKK39447
Location: 3247448-3248323
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 582
Sequence coverage: 98 %
E-value: 0.0
NCBI BlastP on this gene
APECO2_12600
WxcM-like domain-containing protein
Accession:
AKK39446
Location: 3247020-3247430
NCBI BlastP on this gene
APECO2_12595
N-acetyltransferase
Accession:
AKK39445
Location: 3246566-3247033
NCBI BlastP on this gene
APECO2_12590
DegT/DnrJ/EryC1/StrS family aminotransferase
Accession:
AKK39444
Location: 3245467-3246573
NCBI BlastP on this gene
APECO2_12585
O50 family O-antigen flippase
Accession:
AKK39443
Location: 3244205-3245467
NCBI BlastP on this gene
APECO2_12580
hypothetical protein
Accession:
AKK39442
Location: 3243139-3244188
NCBI BlastP on this gene
APECO2_12575
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AKK39441
Location: 3242561-3243118
NCBI BlastP on this gene
rfbC
hypothetical protein
Accession:
AKK39440
Location: 3241532-3242494
NCBI BlastP on this gene
APECO2_12565
glycosyltransferase family 2 protein
Accession:
AKK39439
Location: 3240652-3241539
NCBI BlastP on this gene
APECO2_12560
354. :
AF402315
Shigella boydii serotype 9 O-antigen gene cluster Total score: 4.0 Cumulative Blast bit score: 1790
glucose-1-phosphate uridylyltransferase
Accession:
AAL27346
Location: 1-765
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase
Accession:
AAL27347
Location: 1138-2223
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 613
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-6-deoxy-L-mannose-dehydrogenase
Accession:
AAL27348
Location: 2223-3122
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
AAL27349
Location: 3180-4061
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 587
Sequence coverage: 98 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
putative glycosyl transferase
Accession:
AAL27350
Location: 4069-4932
NCBI BlastP on this gene
wbgQ
O-antigen polymerase
Accession:
AAL27351
Location: 4922-6139
NCBI BlastP on this gene
wzy
putative glycosyl transferase
Accession:
AAL27352
Location: 6141-6947
NCBI BlastP on this gene
wbgR
O-antigen flippase
Accession:
AAL27353
Location: 6944-8191
NCBI BlastP on this gene
wzx
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession:
AAL27354
Location: 8163-8696
NCBI BlastP on this gene
rmlC
putative glycosyl transferase
Accession:
AAL27355
Location: 8698-9471
NCBI BlastP on this gene
wbgS
6-phosphogluconate dehydrogenase
Accession:
AAL27356
Location: 9595-10911
NCBI BlastP on this gene
gnd
355. :
CP010151
Escherichia coli strain D8 Total score: 4.0 Cumulative Blast bit score: 1789
colanic acid exporter
Accession:
APK33196
Location: 962025-963503
NCBI BlastP on this gene
RG41_04480
colanic acid biosynthesis protein
Accession:
APK33197
Location: 963683-964963
NCBI BlastP on this gene
RG41_04485
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
APK33198
Location: 964960-966180
NCBI BlastP on this gene
RG41_04490
colanic acid biosynthesis protein
Accession:
APK33199
Location: 966191-967585
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
APK33200
Location: 967760-968653
NCBI BlastP on this gene
RG41_04500
dTDP-glucose 4,6-dehydratase
Accession:
APK33201
Location: 969026-970111
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 613
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
RG41_04505
dTDP-4-dehydrorhamnose reductase
Accession:
APK33202
Location: 970111-971010
BlastP hit with rmlD
Percentage identity: 93 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
RG41_04510
glucose-1-phosphate thymidylyltransferase
Accession:
APK33203
Location: 971069-971947
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
RG41_04515
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
APK33204
Location: 971952-972500
NCBI BlastP on this gene
RG41_04520
transporter
Accession:
APK33205
Location: 972512-973750
NCBI BlastP on this gene
RG41_04525
glycosyl transferase family 2
Accession:
APK33206
Location: 973747-974649
NCBI BlastP on this gene
RG41_04530
polymerase
Accession:
APK33207
Location: 974646-975833
NCBI BlastP on this gene
RG41_04535
glycosyltransferase
Accession:
APK33208
Location: 975946-977049
NCBI BlastP on this gene
RG41_04540
UDP-glucose 4-epimerase
Accession:
APK33209
Location: 977058-978092
NCBI BlastP on this gene
RG41_04545
capsular biosynthesis protein
Accession:
APK36989
Location: 978094-979200
NCBI BlastP on this gene
RG41_04550
356. :
CP048603
Escherichia coli strain ChlosBP-23-1 chromosome Total score: 4.0 Cumulative Blast bit score: 1788
M-antigen undecaprenyl disphosphate flippase
Accession:
QIB10632
Location: 1809496-1810974
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QIB10633
Location: 1811047-1812327
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QIB10634
Location: 1812324-1813544
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QIB10635
Location: 1813555-1814949
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QIB10636
Location: 1815124-1816017
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QIB10637
Location: 1816389-1817474
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QIB10638
Location: 1817474-1818373
BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 589
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QIB10639
Location: 1818431-1819309
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 591
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QIB10640
Location: 1819312-1819854
NCBI BlastP on this gene
rfbC
O25 family O-antigen flippase
Accession:
QIB10641
Location: 1819856-1821121
NCBI BlastP on this gene
wzx
glycosyltransferase family 2 protein
Accession:
QIB10642
Location: 1821121-1822086
NCBI BlastP on this gene
G3M71_08480
glycosyltransferase family 4 protein
Accession:
QIB10643
Location: 1822153-1823301
NCBI BlastP on this gene
G3M71_08485
acetyltransferase
Accession:
QIB13241
Location: 1824787-1825083
NCBI BlastP on this gene
G3M71_08495
glycosyltransferase family 4 protein
Accession:
QIB10644
Location: 1825360-1826463
NCBI BlastP on this gene
G3M71_08500
357. :
CP001671
Escherichia coli ABU 83972 Total score: 4.0 Cumulative Blast bit score: 1788
lipopolysaccharide biosynthesis protein WzxC
Accession:
ADN46893
Location: 2382235-2383713
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis protein WcaK
Accession:
ADN46892
Location: 2380882-2382162
NCBI BlastP on this gene
wcaK
putative colanic acid biosynthesis glycosyl transferase
Accession:
ADN46891
Location: 2379665-2380885
NCBI BlastP on this gene
wcaL
putative colanic acid biosynthetic protein WcaM
Accession:
ADN46890
Location: 2378260-2379654
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase subunit GalF
Accession:
ADN46889
Location: 2377192-2378085
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase rmlB
Accession:
ADN46888
Location: 2375735-2376820
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
ADN46887
Location: 2374836-2375735
BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 589
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
ADN46886
Location: 2373900-2374778
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 591
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ADN46885
Location: 2373355-2373897
NCBI BlastP on this gene
rmlC
polysaccharide biosynthesis protein
Accession:
ADN46884
Location: 2372088-2373353
NCBI BlastP on this gene
ECABU_c23690
putative glycosyl transferase family 2
Accession:
ADN46883
Location: 2371123-2372088
NCBI BlastP on this gene
ECABU_c23680
putative glycosyltransferase
Accession:
ADN46882
Location: 2369908-2371056
NCBI BlastP on this gene
ECABU_c23670
hypothetical membrane protein
Accession:
ADN46881
Location: 2368719-2369480
NCBI BlastP on this gene
ECABU_c23660
putative O-acetyl transferase
Accession:
ADN46880
Location: 2368125-2368433
NCBI BlastP on this gene
ECABU_c23650
lipopolysaccharide biosynthesis protein
Accession:
ADN46879
Location: 2366745-2367848
NCBI BlastP on this gene
wbuH
358. :
CP048647
Escherichia coli strain GW-AmxH19 chromosome Total score: 4.0 Cumulative Blast bit score: 1786
M-antigen undecaprenyl disphosphate flippase
Accession:
QIB94587
Location: 1835614-1837092
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QIB94588
Location: 1837272-1838552
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QIB94589
Location: 1838549-1839769
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QIB94590
Location: 1839780-1841174
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QIB94591
Location: 1841349-1842242
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QIB94592
Location: 1842615-1843700
BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 610
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QIB94593
Location: 1843700-1844599
BlastP hit with rmlD
Percentage identity: 93 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QIB94594
Location: 1844658-1845536
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QIB94595
Location: 1845541-1846089
NCBI BlastP on this gene
rfbC
O4 family O-antigen flippase
Accession:
QIB94596
Location: 1846101-1847339
NCBI BlastP on this gene
wzx
glycosyltransferase family 2 protein
Accession:
QIB94597
Location: 1847336-1848238
NCBI BlastP on this gene
G3273_08645
O4 family O-antigen polymerase
Accession:
QIB94598
Location: 1848235-1849422
NCBI BlastP on this gene
wzy
glycosyltransferase family 4 protein
Accession:
QIB94599
Location: 1849535-1850638
NCBI BlastP on this gene
G3273_08655
UDP-N-acetylglucosamine
Accession:
QIB94600
Location: 1850647-1851681
NCBI BlastP on this gene
fnlA
capsular polysaccharide biosynthesis protein CapF
Accession:
QIB97407
Location: 1851683-1852789
NCBI BlastP on this gene
G3273_08665
359. :
CP043752
Escherichia coli strain CVM N56639 chromosome Total score: 4.0 Cumulative Blast bit score: 1782
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QEP83891
Location: 1857358-1858638
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QEP83892
Location: 1858635-1859855
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QEP83893
Location: 1859866-1861260