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MultiGeneBlast hits
Select gene cluster alignment
401. CP049204_0 Escherichia coli strain PapM-32-1 chromosome, complete genome.
402. CP047662_0 Escherichia coli strain LD93-1 chromosome, complete genome.
403. CP042901_0 Escherichia coli strain CFSAN061762 chromosome, complete genome.
404. CP032513_0 Shigella flexneri strain SFL1520 chromosome, complete genome.
405. CP025747_0 Escherichia coli strain ML35 chromosome, complete genome.
406. CP020058_0 Escherichia coli strain AR_0061, complete genome.
407. AB972422_0 Escherichia coli genes for O-antigen biosynthesis gene cluste...
408. AB972421_0 Escherichia coli genes for O-antigen biosynthesis gene cluste...
409. AB972413_0 Escherichia coli genes for O-antigen biosynthesis gene cluste...
410. CP045522_0 Shigella flexneri strain 5908.2 chromosome, complete genome.
411. CP026098_0 Shigella flexneri strain FDAARGOS_74 chromosome, complete gen...
412. CP020753_0 Shigella flexneri 1c strain Y394 chromosome, complete genome.
413. CP014111_0 Escherichia coli strain FDAARGOS_144 chromosome, complete gen...
414. CP037923_0 Shigella flexneri 5a str. M90T chromosome, complete genome.
415. CP034060_0 Shigella flexneri strain FDAARGOS_535 chromosome, complete ge...
416. AE005674_0 Shigella flexneri 2a str. 301, complete genome.
417. LM651928_0 Shigella flexneri genome assembly NCTC1, chromosome : 1.
418. KT988057_0 Salmonella enterica subsp. enterica serovar Typhi x Shigella ...
419. KT988056_0 Shigella flexneri x Salmonella enterica subsp. enterica serov...
420. KT988055_0 Salmonella enterica subsp. enterica serovar Typhi x Shigella ...
421. KT988054_0 Salmonella enterica subsp. enterica serovar Typhi x Shigella ...
422. CP050985_0 Shigella flexneri strain FDAARGOS_716 chromosome.
423. CP042980_0 Shigella flexneri Y strain PE577 chromosome, complete genome.
424. CP037996_0 Shigella flexneri strain FC906 chromosome, complete genome.
425. CP033510_0 Shigella flexneri strain 2016AM-0877 chromosome, complete gen...
426. CP030915_0 Shigella flexneri 2a strain 1508 chromosome.
427. CP024984_0 Shigella flexneri strain 837 chromosome.
428. CP024983_0 Shigella flexneri strain 36P chromosome.
429. CP024982_0 Shigella flexneri strain 113 chromosome.
430. CP024981_0 Shigella flexneri strain 201 chromosome.
431. CP020342_0 Shigella flexneri 1a strain 0439 chromosome, complete genome.
432. CP020339_0 Shigella flexneri 4c strain 0702 chromosome, complete genome.
433. CP020336_0 Shigella flexneri 4c strain 1602 chromosome, complete genome.
434. CP020086_0 Shigella flexneri 1a strain 0670 chromosome, complete genome.
435. CP012735_0 Shigella flexneri 1a strain 0228, complete genome.
436. CP012140_0 Shigella flexneri 4c strain 1205, complete genome.
437. CP012137_0 Shigella flexneri 2a strain 981, complete genome.
438. CP007037_0 Shigella flexneri G1663, complete genome.
439. CP004057_0 Shigella flexneri Shi06HN006, complete genome.
440. CP001383_0 Shigella flexneri 2002017, complete genome.
441. AE014073_0 Shigella flexneri 2a str. 2457T, complete genome.
442. CP045941_0 Shigella flexneri 2a strain AUSMDU00010535 chromosome, comple...
443. KY710729_0 Proteus penneri strain G2658 O antigen gene cluster, complete...
444. MK595727_0 Enterobacter cloacae strain NCTC 11584 O antigen gene cluster...
445. GU445927_0 Escherichia coli serogroup O71 O-antigen gene cluster, comple...
446. CP026399_0 Escherichia coli strain ECONIH4 chromosome, complete genome.
447. CP015594_0 Acinetobacter sp. NCu2D-2 chromosome, complete genome.
448. CP034289_0 Vibrio parahaemolyticus strain 20140722001-1 chromosome I, co...
449. CP034285_0 Vibrio parahaemolyticus strain 20140624012-1 chromosome I, co...
450. CP016546_0 Escherichia coli strain O177:H21 chromosome, complete genome.
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP049204
: Escherichia coli strain PapM-32-1 chromosome Total score: 3.5 Cumulative Blast bit score: 965
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QIF18133
Location: 1824645-1825925
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QIF18134
Location: 1825922-1827142
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QIF18135
Location: 1827153-1828547
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QIF18136
Location: 1828722-1829615
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QIF18137
Location: 1829988-1831073
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QIF18138
Location: 1831073-1831972
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QIF18139
Location: 1832031-1832909
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QIF18140
Location: 1832914-1833459
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
QIF18141
Location: 1833475-1834731
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
QIF18142
Location: 1834761-1835651
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 134
Sequence coverage: 88 %
E-value: 2e-33
NCBI BlastP on this gene
G6Z93_08570
glycosyltransferase
Accession:
QIF20857
Location: 1835680-1836549
NCBI BlastP on this gene
G6Z93_08575
O13/O129/O135 family O-antigen polymerase
Accession:
QIF18143
Location: 1836570-1837718
NCBI BlastP on this gene
wzy
GtrA family protein
Accession:
QIF18144
Location: 1837722-1838096
NCBI BlastP on this gene
G6Z93_08585
glycosyltransferase
Accession:
QIF18145
Location: 1838159-1839085
NCBI BlastP on this gene
G6Z93_08590
DUF2029 domain-containing protein
Accession:
G6Z93_08595
Location: 1839612-1840527
NCBI BlastP on this gene
G6Z93_08595
hypothetical protein
Accession:
QIF18146
Location: 1840524-1840883
NCBI BlastP on this gene
G6Z93_08600
NADP-dependent phosphogluconate dehydrogenase
Accession:
QIF18147
Location: 1840992-1842398
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP047662
: Escherichia coli strain LD93-1 chromosome Total score: 3.5 Cumulative Blast bit score: 965
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QHJ66508
Location: 2865753-2867033
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QHJ66507
Location: 2864536-2865756
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QHJ66506
Location: 2863131-2864525
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QHJ66505
Location: 2862063-2862956
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QHJ66504
Location: 2860605-2861690
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QHJ66503
Location: 2859706-2860605
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QHJ66502
Location: 2858769-2859647
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QHJ66501
Location: 2858219-2858764
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
QHJ66500
Location: 2856947-2858203
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
QHJ66499
Location: 2856027-2856917
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 134
Sequence coverage: 88 %
E-value: 2e-33
NCBI BlastP on this gene
GUU84_13665
glycosyltransferase
Accession:
QHJ68260
Location: 2855129-2855998
NCBI BlastP on this gene
GUU84_13660
O13/O129/O135 family O-antigen polymerase
Accession:
QHJ66498
Location: 2853960-2855108
NCBI BlastP on this gene
wzy
GtrA family protein
Accession:
QHJ66497
Location: 2853543-2853956
NCBI BlastP on this gene
GUU84_13650
hypothetical protein
Accession:
QHJ68259
Location: 2852966-2853325
NCBI BlastP on this gene
GUU84_13645
NADP-dependent phosphogluconate dehydrogenase
Accession:
QHJ66496
Location: 2851451-2852857
NCBI BlastP on this gene
gndA
UDP-glucose 6-dehydrogenase
Accession:
QHJ66495
Location: 2850036-2851202
NCBI BlastP on this gene
GUU84_13635
LPS O-antigen chain length determinant protein WzzB
Accession:
QHJ68258
Location: 2848912-2849889
NCBI BlastP on this gene
wzzB
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP042901
: Escherichia coli strain CFSAN061762 chromosome Total score: 3.5 Cumulative Blast bit score: 965
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QEF58457
Location: 1807405-1808685
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QEF58458
Location: 1808682-1809902
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QEF58459
Location: 1809913-1811307
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QEF58460
Location: 1811482-1812375
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QEF58461
Location: 1812748-1813833
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QEF58462
Location: 1813833-1814732
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QEF58463
Location: 1814791-1815669
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QEF58464
Location: 1815674-1816219
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
QEF58465
Location: 1816235-1817491
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
QEF58466
Location: 1817521-1818411
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 134
Sequence coverage: 88 %
E-value: 2e-33
NCBI BlastP on this gene
CA898_008625
glycosyltransferase
Accession:
QEF61165
Location: 1818440-1819309
NCBI BlastP on this gene
CA898_008630
O13/O129/O135 family O-antigen polymerase
Accession:
QEF58467
Location: 1819330-1820478
NCBI BlastP on this gene
wzy
GtrA family protein
Accession:
QEF58468
Location: 1820482-1820856
NCBI BlastP on this gene
CA898_008640
glycosyltransferase
Accession:
CA898_008645
Location: 1820919-1821845
NCBI BlastP on this gene
CA898_008645
DUF2029 domain-containing protein
Accession:
QEF58469
Location: 1821874-1823286
NCBI BlastP on this gene
CA898_008650
hypothetical protein
Accession:
QEF58470
Location: 1823283-1823642
NCBI BlastP on this gene
CA898_008655
NADP-dependent phosphogluconate dehydrogenase
Accession:
QEF58471
Location: 1823751-1825157
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP032513
: Shigella flexneri strain SFL1520 chromosome Total score: 3.5 Cumulative Blast bit score: 965
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QBB80166
Location: 1028839-1030119
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QBB80165
Location: 1027622-1028842
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QBB80164
Location: 1026217-1027611
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
QBB80163
Location: 1025149-1026042
NCBI BlastP on this gene
D6T62_05500
hypothetical protein
Accession:
D6T62_05495
Location: 1024848-1025112
NCBI BlastP on this gene
D6T62_05495
dTDP-glucose 4,6-dehydratase
Accession:
QBB80162
Location: 1023691-1024776
NCBI BlastP on this gene
rfbB
NAD(P)-dependent oxidoreductase
Accession:
QBB80161
Location: 1022792-1023691
NCBI BlastP on this gene
D6T62_05485
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QBB80160
Location: 1021855-1022733
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QBB80159
Location: 1021305-1021850
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
QBB80158
Location: 1020033-1021289
NCBI BlastP on this gene
D6T62_05470
rhamnosyltransferase
Accession:
QBB80157
Location: 1019113-1020003
BlastP hit with wbwV
Percentage identity: 34 %
BlastP bit score: 135
Sequence coverage: 88 %
E-value: 8e-34
NCBI BlastP on this gene
D6T62_05465
glycosyltransferase
Accession:
QBB83141
Location: 1018215-1019084
NCBI BlastP on this gene
D6T62_05460
GtrA family protein
Accession:
QBB80156
Location: 1016670-1017044
NCBI BlastP on this gene
D6T62_05450
glycosyltransferase
Accession:
D6T62_05445
Location: 1015669-1016607
NCBI BlastP on this gene
D6T62_05445
hypothetical protein
Accession:
QBB83140
Location: 1014898-1015497
NCBI BlastP on this gene
D6T62_05440
hypothetical protein
Accession:
D6T62_05435
Location: 1014245-1014797
NCBI BlastP on this gene
D6T62_05435
hypothetical protein
Accession:
QBB80155
Location: 1013889-1014248
NCBI BlastP on this gene
D6T62_05430
NADP-dependent phosphogluconate dehydrogenase
Accession:
QBB80154
Location: 1012374-1013780
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP025747
: Escherichia coli strain ML35 chromosome Total score: 3.5 Cumulative Blast bit score: 965
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AUO58179
Location: 3081367-3082647
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AUO58178
Location: 3080150-3081370
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AUO58177
Location: 3078745-3080139
NCBI BlastP on this gene
C1I23_16740
GalU regulator GalF
Accession:
AUO58176
Location: 3077677-3078570
NCBI BlastP on this gene
C1I23_16735
hypothetical protein
Accession:
C1I23_16730
Location: 3077376-3077640
NCBI BlastP on this gene
C1I23_16730
dTDP-glucose 4,6-dehydratase
Accession:
AUO58175
Location: 3076219-3077304
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AUO58174
Location: 3075320-3076219
NCBI BlastP on this gene
C1I23_16720
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AUO58173
Location: 3074383-3075261
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
C1I23_16715
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AUO58172
Location: 3073833-3074378
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
AUO58171
Location: 3072561-3073817
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
AUO58170
Location: 3071641-3072531
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 134
Sequence coverage: 88 %
E-value: 2e-33
NCBI BlastP on this gene
C1I23_16700
dTDP-rhamnosyl transferase RfbG
Accession:
AUO59951
Location: 3070743-3071612
NCBI BlastP on this gene
C1I23_16695
O13/O129/O135 family O-antigen polymerase
Accession:
AUO58169
Location: 3069574-3070722
NCBI BlastP on this gene
wzy
translocase
Accession:
AUO58168
Location: 3069196-3069570
NCBI BlastP on this gene
C1I23_16685
protein rfbJ
Accession:
C1I23_16680
Location: 3068207-3069133
NCBI BlastP on this gene
C1I23_16680
hypothetical protein
Accession:
C1I23_16675
Location: 3067418-3068022
NCBI BlastP on this gene
C1I23_16675
hypothetical protein
Accession:
AUO59950
Location: 3066766-3067317
NCBI BlastP on this gene
C1I23_16670
hypothetical protein
Accession:
AUO58167
Location: 3066410-3066769
NCBI BlastP on this gene
C1I23_16665
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession:
AUO58166
Location: 3064895-3066301
NCBI BlastP on this gene
C1I23_16660
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP020058
: Escherichia coli strain AR_0061 Total score: 3.5 Cumulative Blast bit score: 965
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
ARA34429
Location: 148554-149834
NCBI BlastP on this gene
AM440_00695
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
ARA34430
Location: 149831-151051
NCBI BlastP on this gene
AM440_00700
colanic acid biosynthesis protein WcaM
Accession:
ARA34431
Location: 151062-152456
NCBI BlastP on this gene
AM440_00705
GalU regulator GalF
Accession:
ARA34432
Location: 152631-153524
NCBI BlastP on this gene
AM440_00710
dTDP-glucose 4,6-dehydratase
Accession:
ARA34433
Location: 153897-154982
NCBI BlastP on this gene
AM440_00715
NAD(P)-dependent oxidoreductase
Accession:
ARA34434
Location: 154982-155881
NCBI BlastP on this gene
AM440_00720
glucose-1-phosphate thymidylyltransferase
Accession:
ARA34435
Location: 155940-156818
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AM440_00725
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ARA34436
Location: 156823-157368
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
AM440_00730
flippase
Accession:
ARA34437
Location: 157384-158640
NCBI BlastP on this gene
AM440_00735
rhamnosyltransferase
Accession:
ARA34438
Location: 158670-159560
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 134
Sequence coverage: 88 %
E-value: 2e-33
NCBI BlastP on this gene
AM440_00740
dTDP-rhamnosyl transferase RfbG
Accession:
ARA38606
Location: 159589-160458
NCBI BlastP on this gene
AM440_00745
polymerase
Accession:
ARA34439
Location: 160479-161627
NCBI BlastP on this gene
AM440_00750
translocase
Accession:
ARA34440
Location: 161631-162005
NCBI BlastP on this gene
AM440_00755
protein rfbJ
Accession:
ARA34441
Location: 162068-162424
NCBI BlastP on this gene
AM440_00760
hypothetical protein
Accession:
ARA34442
Location: 162515-163006
NCBI BlastP on this gene
AM440_00765
hypothetical protein
Accession:
ARA38607
Location: 163520-164434
NCBI BlastP on this gene
AM440_00770
hypothetical protein
Accession:
ARA34443
Location: 164431-164790
NCBI BlastP on this gene
AM440_00775
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession:
ARA34444
Location: 164899-166305
NCBI BlastP on this gene
AM440_00780
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AB972422
: Escherichia coli genes for O-antigen biosynthesis gene cluster Total score: 3.5 Cumulative Blast bit score: 965
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession:
BAQ02266
Location: 3-908
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession:
BAQ02267
Location: 1071-1976
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
BAQ02268
Location: 2349-3434
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
BAQ02269
Location: 3434-4333
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
BAQ02270
Location: 4392-5270
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
BAQ02271
Location: 5275-5820
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession:
BAQ02272
Location: 5836-7092
NCBI BlastP on this gene
wzx
putative glycosyltransferase
Accession:
BAQ02273
Location: 7122-8012
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 134
Sequence coverage: 88 %
E-value: 3e-33
NCBI BlastP on this gene
BAQ02273
putative glycosyltransferase
Accession:
BAQ02274
Location: 8005-8910
NCBI BlastP on this gene
BAQ02274
O-antigen polymerase
Accession:
BAQ02275
Location: 8931-10079
NCBI BlastP on this gene
wzy
putative glycosyltranslocase
Accession:
BAQ02276
Location: 10083-10496
NCBI BlastP on this gene
BAQ02276
6-phosphogluconate dehydrogenase
Accession:
BAQ02277
Location: 11182-12588
NCBI BlastP on this gene
gnd
UDP-glucose 6-dehydrogenase
Accession:
BAQ02278
Location: 12837-14003
NCBI BlastP on this gene
ugd
O-antigen chain length determinant protein
Accession:
BAQ02279
Location: 14093-15127
NCBI BlastP on this gene
wzz
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AB972421
: Escherichia coli genes for O-antigen biosynthesis gene cluster Total score: 3.5 Cumulative Blast bit score: 965
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession:
BAQ02250
Location: 2-907
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession:
BAQ02251
Location: 1070-1975
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
BAQ02252
Location: 2348-3433
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
BAQ02253
Location: 3433-4332
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
BAQ02254
Location: 4391-5269
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
BAQ02255
Location: 5274-5819
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession:
BAQ02256
Location: 5835-7091
NCBI BlastP on this gene
wzx
putative glycosyltransferase
Accession:
BAQ02257
Location: 7121-8011
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 134
Sequence coverage: 88 %
E-value: 2e-33
NCBI BlastP on this gene
BAQ02257
putative glycosyltransferase
Accession:
BAQ02258
Location: 8004-8909
NCBI BlastP on this gene
BAQ02258
O-antigen polymerase
Accession:
BAQ02259
Location: 8930-10078
NCBI BlastP on this gene
wzy
putative glycosyltranslocase
Accession:
BAQ02260
Location: 10082-10456
NCBI BlastP on this gene
BAQ02260
hypothetical protein
Accession:
BAQ02261
Location: 11474-12886
NCBI BlastP on this gene
BAQ02261
6-phosphogluconate dehydrogenase
Accession:
BAQ02262
Location: 13351-14757
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AB972413
: Escherichia coli genes for O-antigen biosynthesis gene cluster Total score: 3.5 Cumulative Blast bit score: 965
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession:
BAQ02129
Location: 1-897
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession:
BAQ02130
Location: 1060-1965
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
BAQ02131
Location: 2338-3423
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
BAQ02132
Location: 3423-4322
NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession:
BAQ02133
Location: 4381-5259
BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
BAQ02134
Location: 5264-5809
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession:
BAQ02135
Location: 5825-7081
NCBI BlastP on this gene
wzx
putative glycosyltransferase
Accession:
BAQ02136
Location: 7111-8001
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 134
Sequence coverage: 88 %
E-value: 2e-33
NCBI BlastP on this gene
BAQ02136
putative glycosyltransferase
Accession:
BAQ02137
Location: 7994-8899
NCBI BlastP on this gene
BAQ02137
O-antigen polymerase
Accession:
BAQ02138
Location: 8920-10068
NCBI BlastP on this gene
wzy
putative glycosyltranslocase
Accession:
BAQ02139
Location: 10072-10446
NCBI BlastP on this gene
BAQ02139
hypothetical protein
Accession:
BAQ02140
Location: 11464-12876
NCBI BlastP on this gene
BAQ02140
6-phosphogluconate dehydrogenase
Accession:
BAQ02141
Location: 13341-14747
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP045522
: Shigella flexneri strain 5908.2 chromosome Total score: 3.5 Cumulative Blast bit score: 963
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QHQ04466
Location: 2819421-2820701
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QHQ04465
Location: 2818204-2819424
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QHQ04464
Location: 2816799-2818193
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QHQ04463
Location: 2815731-2816624
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QHQ04462
Location: 2814273-2815358
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QHQ04461
Location: 2813374-2814273
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QHQ04460
Location: 2812437-2813315
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QHQ04459
Location: 2811887-2812432
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
QHQ04458
Location: 2810615-2811871
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
QHQ04457
Location: 2809695-2810585
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
GE167_14760
glycosyltransferase
Accession:
QHQ05942
Location: 2808797-2809666
NCBI BlastP on this gene
GE167_14755
O13/O129/O135 family O-antigen polymerase
Accession:
QHQ04456
Location: 2807629-2808777
NCBI BlastP on this gene
wzy
bactoprenol-linked glucose translocase
Accession:
QHQ04455
Location: 2807251-2807625
NCBI BlastP on this gene
GE167_14745
glycosyltransferase
Accession:
GE167_14740
Location: 2806250-2807188
NCBI BlastP on this gene
GE167_14740
hypothetical protein
Accession:
QHQ05940
Location: 2805479-2806078
NCBI BlastP on this gene
GE167_14735
hypothetical protein
Accession:
QHQ04454
Location: 2804827-2805378
NCBI BlastP on this gene
GE167_14730
hypothetical protein
Accession:
QHQ05941
Location: 2804471-2804830
NCBI BlastP on this gene
GE167_14725
NADP-dependent phosphogluconate dehydrogenase
Accession:
QHQ04453
Location: 2802956-2804362
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP026098
: Shigella flexneri strain FDAARGOS_74 chromosome Total score: 3.5 Cumulative Blast bit score: 963
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AUU31375
Location: 2071842-2073122
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AUU31376
Location: 2073119-2074339
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AUU31377
Location: 2074350-2075744
NCBI BlastP on this gene
MC63_010710
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AUU31378
Location: 2075919-2076812
NCBI BlastP on this gene
MC63_010715
hypothetical protein
Accession:
MC63_010720
Location: 2076849-2077113
NCBI BlastP on this gene
MC63_010720
dTDP-glucose 4,6-dehydratase
Accession:
AUU31379
Location: 2077185-2078270
NCBI BlastP on this gene
rfbB
NAD(P)-dependent oxidoreductase
Accession:
AUU31380
Location: 2078270-2079169
NCBI BlastP on this gene
MC63_010730
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AUU31381
Location: 2079228-2080106
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
MC63_010735
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AUU31382
Location: 2080111-2080656
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
AUU31383
Location: 2080672-2081928
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
AUU31384
Location: 2081958-2082848
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
MC63_010750
glycosyl transferase
Accession:
AUU33547
Location: 2082877-2083746
NCBI BlastP on this gene
MC63_010755
O13/O129/O135 family O-antigen polymerase
Accession:
AUU31385
Location: 2083766-2084914
NCBI BlastP on this gene
wzy
bactoprenol-linked glucose translocase
Accession:
AUU31386
Location: 2084918-2085292
NCBI BlastP on this gene
MC63_010765
protein rfbJ
Accession:
MC63_010770
Location: 2085355-2086293
NCBI BlastP on this gene
MC63_010770
hypothetical protein
Accession:
AUU33548
Location: 2086465-2087064
NCBI BlastP on this gene
MC63_010775
hypothetical protein
Accession:
MC63_010780
Location: 2087165-2087717
NCBI BlastP on this gene
MC63_010780
hypothetical protein
Accession:
AUU31387
Location: 2087714-2088073
NCBI BlastP on this gene
MC63_010785
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession:
AUU31388
Location: 2088182-2089588
NCBI BlastP on this gene
MC63_010790
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP020753
: Shigella flexneri 1c strain Y394 chromosome Total score: 3.5 Cumulative Blast bit score: 963
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
ATH70598
Location: 2129564-2130844
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
ATH68402
Location: 2128347-2129567
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
ATH68401
Location: 2126942-2128336
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
ATH68400
Location: 2125874-2126767
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
ATH68399
Location: 2124416-2125501
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
ATH68398
Location: 2123517-2124416
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
ATH68397
Location: 2122580-2123458
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ATH68396
Location: 2122030-2122575
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
ATH68395
Location: 2120758-2122014
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
ATH68394
Location: 2119838-2120728
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
B7485_11985
dTDP-rhamnosyl transferase RfbG
Accession:
ATH70597
Location: 2118940-2119809
NCBI BlastP on this gene
B7485_11980
O13/O129/O135 family O-antigen polymerase
Accession:
ATH68393
Location: 2117772-2118920
NCBI BlastP on this gene
wzy
GtrA family protein
Accession:
B7485_11970
Location: 2117395-2117768
NCBI BlastP on this gene
B7485_11970
glycosyltransferase
Accession:
B7485_25175
Location: 2116394-2117332
NCBI BlastP on this gene
B7485_25175
hypothetical protein
Accession:
ATH68391
Location: 2115624-2116223
NCBI BlastP on this gene
B7485_11955
hypothetical protein
Accession:
ATH70595
Location: 2114972-2115523
NCBI BlastP on this gene
B7485_11950
hypothetical protein
Accession:
ATH68390
Location: 2114616-2114975
NCBI BlastP on this gene
B7485_11945
NADP-dependent phosphogluconate dehydrogenase
Accession:
ATH68389
Location: 2113101-2114507
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP014111
: Escherichia coli strain FDAARGOS_144 chromosome Total score: 3.5 Cumulative Blast bit score: 963
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AVF99638
Location: 1425543-1426823
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AVF99637
Location: 1424326-1425546
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AVF99636
Location: 1422921-1424315
NCBI BlastP on this gene
AL502_09015
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AVF99635
Location: 1421853-1422746
NCBI BlastP on this gene
AL502_09010
hypothetical protein
Accession:
AL502_09005
Location: 1421552-1421816
NCBI BlastP on this gene
AL502_09005
dTDP-glucose 4,6-dehydratase
Accession:
AVF99634
Location: 1420395-1421480
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AVF99633
Location: 1419496-1420395
NCBI BlastP on this gene
AL502_08995
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AVF99632
Location: 1418559-1419437
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AL502_08990
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AVF99631
Location: 1418009-1418554
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
AVF99630
Location: 1416737-1417993
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
AVF99629
Location: 1415817-1416707
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 8e-33
NCBI BlastP on this gene
AL502_08975
dTDP-rhamnosyl transferase RfbG
Accession:
AVG02807
Location: 1414919-1415788
NCBI BlastP on this gene
AL502_08970
O13/O129/O135 family O-antigen polymerase
Accession:
AVF99628
Location: 1413750-1414898
NCBI BlastP on this gene
wzy
translocase
Accession:
AVF99627
Location: 1413372-1413746
NCBI BlastP on this gene
AL502_08960
protein rfbJ
Accession:
AL502_08955
Location: 1412382-1413309
NCBI BlastP on this gene
AL502_08955
hypothetical protein
Accession:
AL502_08950
Location: 1411593-1412197
NCBI BlastP on this gene
AL502_08950
hypothetical protein
Accession:
AL502_08945
Location: 1410940-1411492
NCBI BlastP on this gene
AL502_08945
hypothetical protein
Accession:
AVF99626
Location: 1410584-1410943
NCBI BlastP on this gene
AL502_08940
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession:
AVF99625
Location: 1409069-1410475
NCBI BlastP on this gene
AL502_08935
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP037923
: Shigella flexneri 5a str. M90T chromosome Total score: 3.5 Cumulative Blast bit score: 961
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QCC31235
Location: 1085269-1086549
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QCC31236
Location: 1086546-1087766
NCBI BlastP on this gene
wcaL
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QCC31237
Location: 1089346-1090239
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QCC31238
Location: 1090612-1091697
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QCC31239
Location: 1091697-1092596
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QCC31240
Location: 1092655-1093533
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QCC31241
Location: 1093538-1094083
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
QCC31242
Location: 1094099-1095355
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
QCC31243
Location: 1095385-1096275
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
EKN05_005410
glycosyltransferase
Accession:
QCC34140
Location: 1096304-1097173
NCBI BlastP on this gene
EKN05_005415
O13/O129/O135 family O-antigen polymerase
Accession:
QCC31244
Location: 1097193-1098341
NCBI BlastP on this gene
wzy
bactoprenol-linked glucose translocase
Accession:
QCC31245
Location: 1098345-1098719
NCBI BlastP on this gene
EKN05_005425
glycosyltransferase
Accession:
EKN05_005430
Location: 1098782-1099720
NCBI BlastP on this gene
EKN05_005430
hypothetical protein
Accession:
QCC34141
Location: 1099892-1100491
NCBI BlastP on this gene
EKN05_005435
hypothetical protein
Accession:
QCC31246
Location: 1100592-1101143
NCBI BlastP on this gene
EKN05_005440
hypothetical protein
Accession:
QCC31247
Location: 1101140-1101499
NCBI BlastP on this gene
EKN05_005445
NADP-dependent phosphogluconate dehydrogenase
Accession:
QCC31248
Location: 1101608-1103014
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP034060
: Shigella flexneri strain FDAARGOS_535 chromosome Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AZG50667
Location: 2041750-2043030
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AZG50668
Location: 2043027-2044247
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AZG50669
Location: 2044258-2045652
NCBI BlastP on this gene
wcaM
GalU regulator GalF
Accession:
AZG50670
Location: 2045827-2046720
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
AZG50671
Location: 2047093-2048178
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AZG50672
Location: 2048178-2049077
NCBI BlastP on this gene
EGX88_11495
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AZG50673
Location: 2049136-2050014
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AZG50674
Location: 2050019-2050564
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
AZG50675
Location: 2050580-2051836
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
AZG50676
Location: 2051866-2052756
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 130
Sequence coverage: 88 %
E-value: 7e-32
NCBI BlastP on this gene
EGX88_11515
dTDP-rhamnosyl transferase RfbG
Accession:
AZG52829
Location: 2052785-2053654
NCBI BlastP on this gene
EGX88_11520
O13/O129/O135 family O-antigen polymerase
Accession:
AZG50677
Location: 2053674-2054822
NCBI BlastP on this gene
EGX88_11525
bactoprenol-linked glucose translocase
Accession:
AZG50678
Location: 2054826-2055200
NCBI BlastP on this gene
EGX88_11530
glycosyltransferase
Accession:
EGX88_11535
Location: 2055263-2056201
NCBI BlastP on this gene
EGX88_11535
hypothetical protein
Accession:
AZG50679
Location: 2056372-2056971
NCBI BlastP on this gene
EGX88_11540
hypothetical protein
Accession:
AZG52830
Location: 2057072-2057623
NCBI BlastP on this gene
EGX88_11545
hypothetical protein
Accession:
AZG50680
Location: 2057620-2057979
NCBI BlastP on this gene
EGX88_11550
NADP-dependent phosphogluconate dehydrogenase
Accession:
AZG50681
Location: 2058088-2059494
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AE005674
: Shigella flexneri 2a str. 301 Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
putative galactokinase
Accession:
AAN43647
Location: 2122751-2124031
NCBI BlastP on this gene
wcaK
putative colanic acid biosynthesis glycosyl transferase
Accession:
AAN43646
Location: 2121534-2122754
NCBI BlastP on this gene
wcaL
conserved hypothetical protein
Accession:
AAN43645
Location: 2120129-2121523
NCBI BlastP on this gene
wcaM
UTP--glucose-1-P uridyltransferase
Accession:
AAN43644
Location: 2119061-2119954
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
AAN43643
Location: 2117603-2118688
NCBI BlastP on this gene
rfbB
dTDP-6-deoxy-L-mannose-dehydrogenase
Accession:
AAN43642
Location: 2116704-2117603
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase
Accession:
AAN43641
Location: 2115767-2116645
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-6-deoxy-L-mannose-dehydrogenase
Accession:
AAN43640
Location: 2115217-2115762
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
polysaccharide biosynthesis protein
Accession:
AAN43639
Location: 2113945-2115201
NCBI BlastP on this gene
rfbE
dTDP-rhamnosyl transferase
Accession:
AAN43638
Location: 2113025-2113915
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 134
Sequence coverage: 88 %
E-value: 4e-33
NCBI BlastP on this gene
rfbF
dTDP-rhamnosyl transferase
Accession:
AAN43637
Location: 2112127-2112996
NCBI BlastP on this gene
rfbG
O-antigen polymerase
Accession:
AAN43636
Location: 2110959-2112107
NCBI BlastP on this gene
rfc
glycosyl translocase
Accession:
AAN43635
Location: 2110581-2110955
NCBI BlastP on this gene
rfbI
glycosyl transferase
Accession:
AAN43634
Location: 2110129-2110518
NCBI BlastP on this gene
rfbJ
conserved hypothetical protein
Accession:
AAN43633
Location: 2109580-2110071
NCBI BlastP on this gene
SF2094
conserved hypothetical protein
Accession:
AAN43632
Location: 2108764-2109363
NCBI BlastP on this gene
SF2093
conserved hypothetical protein
Accession:
AAN43631
Location: 2108112-2108663
NCBI BlastP on this gene
SF2092
gluconate-6-phosphate dehydrogenase
Accession:
AAN43630
Location: 2106241-2107647
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
LM651928
: Shigella flexneri genome assembly NCTC1, chromosome : 1. Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
putative pyruvyl transferase,colanic acid
Accession:
CDX07493
Location: 2089905-2091185
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyl transferase
Accession:
CDX07492
Location: 2088688-2089908
NCBI BlastP on this gene
wcaL
putative colanic acid biosynthesis
Accession:
CDX07491
Location: 2087283-2088677
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
CDX07490
Location: 2086215-2087108
NCBI BlastP on this gene
galF
dTDP-glucose-4,6-dehydratase,dTDP-glucose
Accession:
CDX07489
Location: 2084757-2085842
NCBI BlastP on this gene
rfbB2
dTDP-4-dehydrorhamnose
Accession:
CDX07488
Location: 2083858-2084757
NCBI BlastP on this gene
rfbD
glucose-1-phosphate
Accession:
CDX07487
Location: 2082921-2083799
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA1
dTDP-4-dehydrorhamnose
Accession:
CDX07486
Location: 2082371-2082916
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
putative O-antigen
Accession:
CDX07485
Location: 2081099-2082355
NCBI BlastP on this gene
wzxC_1
dTDP-rhamnosyl transferase rfbF,rhamnosyltransferase,Glycosyl transferase family 2
Accession:
CDX07484
Location: 2080179-2081069
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
NCTC1_02307
dTDP-rhamnosyl transferase rfbG,putative glycosyl transferase,Glycosyl transferase family 2
Accession:
CDX07483
Location: 2079281-2080150
NCBI BlastP on this gene
NCTC1_02306
O-antigen polymerase
Accession:
CDX07482
Location: 2078113-2079261
NCBI BlastP on this gene
NCTC1_02305
Protein rfbJ,putative
Accession:
CDX07481
Location: 2077283-2077672
NCBI BlastP on this gene
NCTC1_02304
glycosyltransferase
Accession:
CDX07480
Location: 2076734-2077225
NCBI BlastP on this gene
NCTC1_02303
hypothetical protein
Accession:
CDX07479
Location: 2076566-2076718
NCBI BlastP on this gene
NCTC1_02302
hypothetical protein
Accession:
CDX07478
Location: 2075964-2076563
NCBI BlastP on this gene
NCTC1_02301
hypothetical protein
Accession:
CDX07477
Location: 2074956-2075378
NCBI BlastP on this gene
NCTC1_02300
6-phosphogluconate
Accession:
CDX07476
Location: 2073441-2074847
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KT988057
: Salmonella enterica subsp. enterica serovar Typhi x Shigella flexneri 3a TviD (tviD), O... Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
Oac
Accession:
ARS43308
Location: 2934-3935
NCBI BlastP on this gene
oac
GtrA
Accession:
ARS43309
Location: 4064-4426
NCBI BlastP on this gene
gtrA
GtrB
Accession:
ARS43310
Location: 4423-5340
NCBI BlastP on this gene
gtrB
GtrX
Accession:
ARS43311
Location: 5353-6618
NCBI BlastP on this gene
gtrX
RfbB
Accession:
ARS43312
Location: 7000-8085
NCBI BlastP on this gene
rfbB
RfbD
Accession:
ARS43313
Location: 8085-8984
NCBI BlastP on this gene
rfbD
RfbA
Accession:
ARS43314
Location: 9043-9921
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
RfbC
Accession:
ARS43315
Location: 9925-10470
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
RfbE
Accession:
ARS43316
Location: 10486-11742
NCBI BlastP on this gene
rfbE
RfbF
Accession:
ARS43317
Location: 11772-12662
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
rfbF
RfbG
Accession:
ARS43318
Location: 12655-13560
NCBI BlastP on this gene
rfbG
Rfc
Accession:
ARS43319
Location: 13580-14728
NCBI BlastP on this gene
rfc
RfbI
Accession:
ARS43320
Location: 14732-15106
NCBI BlastP on this gene
rfbI
RfbJ
Accession:
ARS43321
Location: 15169-15558
NCBI BlastP on this gene
rfbJ
hypothetical protein
Accession:
ARS43322
Location: 15616-16107
NCBI BlastP on this gene
Orf
hypothetical protein
Accession:
ARS43323
Location: 16278-16877
NCBI BlastP on this gene
ARS43323
VexA
Accession:
ARS43324
Location: 16940-18007
NCBI BlastP on this gene
vexA
VexB
Accession:
ARS43325
Location: 18017-18811
NCBI BlastP on this gene
vexB
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KT988056
: Shigella flexneri x Salmonella enterica subsp. enterica serovar Typhi TviD (tviD), Bgt ... Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
TviD
Accession:
ARS43290
Location: 1-2496
NCBI BlastP on this gene
tviD
Bgt
Accession:
ARS43291
Location: 3076-4005
NCBI BlastP on this gene
bgt
GtrII
Accession:
ARS43292
Location: 4002-5462
NCBI BlastP on this gene
gtrII
RfbB
Accession:
ARS43293
Location: 5481-6566
NCBI BlastP on this gene
rfbB
RfbD
Accession:
ARS43294
Location: 6566-7465
NCBI BlastP on this gene
rfbD
RfbA
Accession:
ARS43295
Location: 7524-8402
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
RfbC
Accession:
ARS43296
Location: 8406-8951
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
RfbE
Accession:
ARS43297
Location: 8967-10223
NCBI BlastP on this gene
rfbE
RbfB
Accession:
ARS43298
Location: 10253-11143
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
rfbF
RfbG
Accession:
ARS43299
Location: 11136-12041
NCBI BlastP on this gene
rfbG
Rfc
Accession:
ARS43300
Location: 12061-13209
NCBI BlastP on this gene
rfc
RfbI
Accession:
ARS43301
Location: 13213-13587
NCBI BlastP on this gene
rfbI
RfbJ
Accession:
ARS43302
Location: 13650-14039
NCBI BlastP on this gene
rfbJ
hypothetical protein
Accession:
ARS43303
Location: 14097-14588
NCBI BlastP on this gene
ARS43303
hypothetical protein
Accession:
ARS43304
Location: 14759-15358
NCBI BlastP on this gene
ARS43304
VexA
Accession:
ARS43305
Location: 15421-16488
NCBI BlastP on this gene
vexA
VexB
Accession:
ARS43306
Location: 16498-17292
NCBI BlastP on this gene
vexB
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KT988055
: Salmonella enterica subsp. enterica serovar Typhi x Shigella flexneri 2a TviD (tviD), B... Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
TviD
Accession:
ARS43273
Location: 1-2496
NCBI BlastP on this gene
tviD
Bgt
Accession:
ARS43274
Location: 2907-3836
NCBI BlastP on this gene
bgt
GtrII
Accession:
ARS43275
Location: 3833-5293
NCBI BlastP on this gene
gtrII
RfbB
Accession:
ARS43276
Location: 5675-6760
NCBI BlastP on this gene
rfbB
RfbD
Accession:
ARS43277
Location: 6760-7659
NCBI BlastP on this gene
rfbD
not annotated
Accession:
ARS43278
Location: 7718-8596
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
not annotated
Accession:
ARS43279
Location: 8600-9145
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
not annotated
Accession:
ARS43280
Location: 9161-10417
NCBI BlastP on this gene
rfbE
RfbF
Accession:
ARS43281
Location: 10447-11337
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
rfbF
RfbG
Accession:
ARS43282
Location: 11330-12235
NCBI BlastP on this gene
rfbG
Rfc
Accession:
ARS43283
Location: 12255-13403
NCBI BlastP on this gene
rfc
RfbI
Accession:
ARS43284
Location: 13407-13781
NCBI BlastP on this gene
rfbI
RfbJ
Accession:
ARS43285
Location: 13844-14233
NCBI BlastP on this gene
rfbJ
hypothetical protein
Accession:
ARS43286
Location: 14291-14782
NCBI BlastP on this gene
ARS43286
hypothetical protein
Accession:
ARS43287
Location: 14953-15552
NCBI BlastP on this gene
Orf
VexA
Accession:
ARS43288
Location: 15615-16682
NCBI BlastP on this gene
vexA
VexB
Accession:
ARS43289
Location: 16692-17486
NCBI BlastP on this gene
vexB
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KT988054
: Salmonella enterica subsp. enterica serovar Typhi x Shigella flexneri 2a TviD (tviD) an... Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
TviD
Accession:
ARS43258
Location: 1-2496
NCBI BlastP on this gene
tviD
Bgt
Accession:
ARS43259
Location: 3076-4005
NCBI BlastP on this gene
bgt
RfbD
Accession:
ARS43260
Location: 6929-7828
NCBI BlastP on this gene
rfbD
RfbA
Accession:
ARS43261
Location: 7887-8765
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
RfbC
Accession:
ARS43262
Location: 8769-9314
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
RfbE
Accession:
ARS43263
Location: 9330-10586
NCBI BlastP on this gene
rfbE
RfbF
Accession:
ARS43264
Location: 10616-11506
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
rfbF
RfbG
Accession:
ARS43265
Location: 11499-12404
NCBI BlastP on this gene
rfbG
Rfc
Accession:
ARS43266
Location: 12424-13572
NCBI BlastP on this gene
rfc
RfbI
Accession:
ARS43267
Location: 13576-13950
NCBI BlastP on this gene
rfbI
rfbJ
Accession:
ARS43268
Location: 14013-14402
NCBI BlastP on this gene
rfbJ
hypothetical protein
Accession:
ARS43269
Location: 14460-14951
NCBI BlastP on this gene
ARS43269
hypothetical protein
Accession:
ARS43270
Location: 15122-15721
NCBI BlastP on this gene
ARS43270
VexA
Accession:
ARS43271
Location: 15784-16851
NCBI BlastP on this gene
vexA
VexB
Accession:
ARS43272
Location: 16861-17655
NCBI BlastP on this gene
vexB
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP050985
: Shigella flexneri strain FDAARGOS_716 chromosome. Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QIY44833
Location: 169460-170740
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QIY44832
Location: 168243-169463
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QIY44831
Location: 166838-168232
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QIY44830
Location: 165770-166663
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QIY44829
Location: 164312-165397
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QIY44828
Location: 163413-164312
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QIY44827
Location: 162476-163354
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QIY44826
Location: 161926-162471
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
QIY44825
Location: 160654-161910
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
QIY44824
Location: 159734-160624
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
FOC24_02355
glycosyltransferase
Accession:
QIY44823
Location: 158836-159741
NCBI BlastP on this gene
FOC24_02350
O13/O129/O135 family O-antigen polymerase
Accession:
QIY44822
Location: 157668-158816
NCBI BlastP on this gene
wzy
bactoprenol-linked glucose translocase
Accession:
QIY44821
Location: 157290-157664
NCBI BlastP on this gene
FOC24_02340
glycosyltransferase
Accession:
FOC24_02335
Location: 156289-157227
NCBI BlastP on this gene
FOC24_02335
hypothetical protein
Accession:
QIY48468
Location: 155519-156082
NCBI BlastP on this gene
FOC24_02330
hypothetical protein
Accession:
QIY44820
Location: 154867-155373
NCBI BlastP on this gene
FOC24_02325
hypothetical protein
Accession:
QIY44819
Location: 154511-154870
NCBI BlastP on this gene
FOC24_02320
NADP-dependent phosphogluconate dehydrogenase
Accession:
QIY44818
Location: 152996-154402
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP042980
: Shigella flexneri Y strain PE577 chromosome Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QEO92843
Location: 2103318-2104598
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QEO92842
Location: 2102101-2103321
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QEO92841
Location: 2100696-2102090
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QEO92840
Location: 2099628-2100521
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QEO92839
Location: 2098170-2099255
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QEO92838
Location: 2097271-2098170
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QEO92837
Location: 2096334-2097212
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QEO92836
Location: 2095784-2096329
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
QEO92835
Location: 2094512-2095768
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
QEO92834
Location: 2093592-2094482
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
FW259_11175
dTDP-rhamnosyl transferase RfbG
Accession:
QEO92833
Location: 2092694-2093563
NCBI BlastP on this gene
FW259_11170
O13/O129/O135 family O-antigen polymerase
Accession:
QEO92832
Location: 2091526-2092674
NCBI BlastP on this gene
wzy
bactoprenol-linked glucose translocase
Accession:
QEO92831
Location: 2091148-2091522
NCBI BlastP on this gene
FW259_11160
glycosyltransferase
Accession:
FW259_11155
Location: 2090147-2091085
NCBI BlastP on this gene
FW259_11155
hypothetical protein
Accession:
QEO92830
Location: 2089377-2089976
NCBI BlastP on this gene
FW259_11150
hypothetical protein
Accession:
QEO92829
Location: 2088725-2089276
NCBI BlastP on this gene
FW259_11145
hypothetical protein
Accession:
QEO94910
Location: 2088369-2088728
NCBI BlastP on this gene
FW259_11140
NADP-dependent phosphogluconate dehydrogenase
Accession:
QEO92828
Location: 2086854-2088260
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP037996
: Shigella flexneri strain FC906 chromosome Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QBQ23096
Location: 3501921-3503201
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QBQ23095
Location: 3500704-3501924
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QBQ23094
Location: 3499299-3500693
NCBI BlastP on this gene
wcaM
GalU regulator GalF
Accession:
QBQ23093
Location: 3498231-3499124
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QBQ23092
Location: 3496773-3497858
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QBQ23091
Location: 3495874-3496773
NCBI BlastP on this gene
CBL25_018165
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QBQ23090
Location: 3494937-3495815
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QBQ23089
Location: 3494387-3494932
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
QBQ23088
Location: 3493115-3494371
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
QBQ23087
Location: 3492195-3493085
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
CBL25_018145
dTDP-rhamnosyl transferase RfbG
Accession:
QBQ24150
Location: 3491297-3492166
NCBI BlastP on this gene
CBL25_018140
O13/O129/O135 family O-antigen polymerase
Accession:
QBQ23086
Location: 3490129-3491277
NCBI BlastP on this gene
wzy
bactoprenol-linked glucose translocase
Accession:
QBQ23085
Location: 3489751-3490125
NCBI BlastP on this gene
CBL25_018130
glycosyltransferase
Accession:
CBL25_018125
Location: 3488750-3489688
NCBI BlastP on this gene
CBL25_018125
hypothetical protein
Accession:
QBQ23084
Location: 3487980-3488579
NCBI BlastP on this gene
CBL25_018120
hypothetical protein
Accession:
QBQ23083
Location: 3487328-3487879
NCBI BlastP on this gene
CBL25_018115
hypothetical protein
Accession:
QBQ24149
Location: 3486972-3487331
NCBI BlastP on this gene
CBL25_018110
NADP-dependent phosphogluconate dehydrogenase
Accession:
QBQ23082
Location: 3485457-3486863
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP033510
: Shigella flexneri strain 2016AM-0877 chromosome Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AYV03557
Location: 391664-392944
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AYV03556
Location: 390447-391667
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AYV03555
Location: 389042-390436
NCBI BlastP on this gene
wcaM
GalU regulator GalF
Accession:
AYV03554
Location: 387974-388867
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
AYV03553
Location: 386516-387601
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AYV03552
Location: 385617-386516
NCBI BlastP on this gene
EEL47_02280
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
AYV03551
Location: 384680-385558
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AYV03550
Location: 384130-384675
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
AYV03549
Location: 382858-384114
NCBI BlastP on this gene
EEL47_02265
rhamnosyltransferase
Accession:
AYV03548
Location: 381938-382828
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
EEL47_02260
dTDP-rhamnosyl transferase RfbG
Accession:
AYV07089
Location: 381040-381909
NCBI BlastP on this gene
EEL47_02255
O13/O129/O135 family O-antigen polymerase
Accession:
AYV03547
Location: 379872-381020
NCBI BlastP on this gene
wzy
bactoprenol-linked glucose translocase
Accession:
AYV03546
Location: 379494-379868
NCBI BlastP on this gene
EEL47_02245
glycosyltransferase
Accession:
EEL47_02240
Location: 378493-379431
NCBI BlastP on this gene
EEL47_02240
hypothetical protein
Accession:
AYV03545
Location: 377723-378322
NCBI BlastP on this gene
EEL47_02235
hypothetical protein
Accession:
AYV07088
Location: 377071-377622
NCBI BlastP on this gene
EEL47_02230
hypothetical protein
Accession:
AYV03544
Location: 376715-377074
NCBI BlastP on this gene
EEL47_02225
NADP-dependent phosphogluconate dehydrogenase
Accession:
AYV03543
Location: 375200-376606
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP030915
: Shigella flexneri 2a strain 1508 chromosome. Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AXC56035
Location: 942370-943650
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AXC56036
Location: 943647-944867
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AXC56037
Location: 944878-946272
NCBI BlastP on this gene
B5690_04810
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AXC56038
Location: 946447-947340
NCBI BlastP on this gene
B5690_04815
hypothetical protein
Accession:
B5690_04820
Location: 947377-947641
NCBI BlastP on this gene
B5690_04820
dTDP-glucose 4,6-dehydratase
Accession:
AXC56039
Location: 947713-948798
NCBI BlastP on this gene
rfbB
NAD(P)-dependent oxidoreductase
Accession:
AXC56040
Location: 948798-949697
NCBI BlastP on this gene
B5690_04830
glucose-1-phosphate thymidylyltransferase
Accession:
AXC56041
Location: 949756-950634
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
B5690_04835
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AXC56042
Location: 950639-951184
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
AXC56043
Location: 951200-952456
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
AXC56044
Location: 952486-953376
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
B5690_04850
dTDP-rhamnosyl transferase RfbG
Accession:
AXC59258
Location: 953405-954274
NCBI BlastP on this gene
B5690_04855
O13/O129/O135 family O-antigen polymerase
Accession:
AXC56045
Location: 954294-955442
NCBI BlastP on this gene
wzy
bactoprenol-linked glucose translocase
Accession:
AXC56046
Location: 955446-955820
NCBI BlastP on this gene
B5690_04865
protein rfbJ
Accession:
B5690_04870
Location: 955883-956821
NCBI BlastP on this gene
B5690_04870
hypothetical protein
Accession:
AXC56047
Location: 956992-957591
NCBI BlastP on this gene
B5690_04875
hypothetical protein
Accession:
AXC59259
Location: 957692-958243
NCBI BlastP on this gene
B5690_04880
hypothetical protein
Accession:
AXC56048
Location: 958240-958599
NCBI BlastP on this gene
B5690_04885
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession:
AXC56049
Location: 958708-960114
NCBI BlastP on this gene
B5690_04890
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP024984
: Shigella flexneri strain 837 chromosome. Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QGU76077
Location: 2796897-2798177
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QGU76078
Location: 2798174-2799394
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QGU76079
Location: 2799405-2800799
NCBI BlastP on this gene
CUC34_14150
UTP--glucose-1-phosphate uridylyltransferase
Accession:
QGU76080
Location: 2800974-2801867
NCBI BlastP on this gene
CUC34_14155
hypothetical protein
Accession:
CUC34_14160
Location: 2801904-2802168
NCBI BlastP on this gene
CUC34_14160
dTDP-glucose 4,6-dehydratase
Accession:
QGU76081
Location: 2802240-2803325
NCBI BlastP on this gene
rfbB
NAD(P)-dependent oxidoreductase
Accession:
QGU76082
Location: 2803325-2804224
NCBI BlastP on this gene
CUC34_14170
glucose-1-phosphate thymidylyltransferase
Accession:
QGU76083
Location: 2804283-2805161
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CUC34_14175
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QGU76084
Location: 2805166-2805711
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
QGU76085
Location: 2805727-2806983
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
QGU76086
Location: 2807013-2807903
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
CUC34_14190
dTDP-rhamnosyl transferase RfbG
Accession:
QGU77653
Location: 2807932-2808801
NCBI BlastP on this gene
CUC34_14195
O13/O129/O135 family O-antigen polymerase
Accession:
QGU76087
Location: 2808821-2809969
NCBI BlastP on this gene
wzy
bactoprenol-linked glucose translocase
Accession:
QGU76088
Location: 2809973-2810347
NCBI BlastP on this gene
CUC34_14205
protein rfbJ
Accession:
CUC34_14210
Location: 2810410-2811348
NCBI BlastP on this gene
CUC34_14210
hypothetical protein
Accession:
QGU76089
Location: 2811519-2812118
NCBI BlastP on this gene
CUC34_14215
hypothetical protein
Accession:
QGU77654
Location: 2812219-2812770
NCBI BlastP on this gene
CUC34_14220
hypothetical protein
Accession:
QGU76090
Location: 2812767-2813126
NCBI BlastP on this gene
CUC34_14225
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession:
QGU76091
Location: 2813235-2814641
NCBI BlastP on this gene
CUC34_14230
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP024983
: Shigella flexneri strain 36P chromosome. Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QGU72028
Location: 2793876-2795156
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QGU72029
Location: 2795153-2796373
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QGU72030
Location: 2796384-2797778
NCBI BlastP on this gene
CUC35_14100
UTP--glucose-1-phosphate uridylyltransferase
Accession:
QGU72031
Location: 2797953-2798846
NCBI BlastP on this gene
CUC35_14105
hypothetical protein
Accession:
CUC35_14110
Location: 2798883-2799147
NCBI BlastP on this gene
CUC35_14110
dTDP-glucose 4,6-dehydratase
Accession:
QGU72032
Location: 2799219-2800304
NCBI BlastP on this gene
rfbB
NAD(P)-dependent oxidoreductase
Accession:
QGU72033
Location: 2800304-2801203
NCBI BlastP on this gene
CUC35_14120
glucose-1-phosphate thymidylyltransferase
Accession:
QGU72034
Location: 2801262-2802140
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CUC35_14125
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QGU72035
Location: 2802145-2802690
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
QGU72036
Location: 2802706-2803962
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
QGU72037
Location: 2803992-2804882
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
CUC35_14140
dTDP-rhamnosyl transferase RfbG
Accession:
QGU73616
Location: 2804911-2805780
NCBI BlastP on this gene
CUC35_14145
O13/O129/O135 family O-antigen polymerase
Accession:
QGU72038
Location: 2805800-2806948
NCBI BlastP on this gene
wzy
bactoprenol-linked glucose translocase
Accession:
QGU72039
Location: 2806952-2807326
NCBI BlastP on this gene
CUC35_14155
protein rfbJ
Accession:
CUC35_14160
Location: 2807389-2808327
NCBI BlastP on this gene
CUC35_14160
hypothetical protein
Accession:
QGU72040
Location: 2808498-2809097
NCBI BlastP on this gene
CUC35_14165
hypothetical protein
Accession:
QGU73617
Location: 2809198-2809749
NCBI BlastP on this gene
CUC35_14170
hypothetical protein
Accession:
QGU72041
Location: 2809746-2810105
NCBI BlastP on this gene
CUC35_14175
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession:
QGU72042
Location: 2810214-2811620
NCBI BlastP on this gene
CUC35_14180
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP024982
: Shigella flexneri strain 113 chromosome. Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QGU60034
Location: 2796785-2798065
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QGU60035
Location: 2798062-2799282
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QGU60036
Location: 2799293-2800687
NCBI BlastP on this gene
CUC38_14145
UTP--glucose-1-phosphate uridylyltransferase
Accession:
QGU60037
Location: 2800862-2801755
NCBI BlastP on this gene
CUC38_14150
hypothetical protein
Accession:
CUC38_14155
Location: 2801792-2802056
NCBI BlastP on this gene
CUC38_14155
dTDP-glucose 4,6-dehydratase
Accession:
QGU60038
Location: 2802128-2803213
NCBI BlastP on this gene
rfbB
NAD(P)-dependent oxidoreductase
Accession:
QGU60039
Location: 2803213-2804112
NCBI BlastP on this gene
CUC38_14165
glucose-1-phosphate thymidylyltransferase
Accession:
QGU60040
Location: 2804171-2805049
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CUC38_14170
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QGU60041
Location: 2805054-2805599
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
QGU60042
Location: 2805615-2806871
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
QGU60043
Location: 2806901-2807791
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
CUC38_14185
dTDP-rhamnosyl transferase RfbG
Accession:
QGU61619
Location: 2807820-2808689
NCBI BlastP on this gene
CUC38_14190
O13/O129/O135 family O-antigen polymerase
Accession:
QGU60044
Location: 2808709-2809857
NCBI BlastP on this gene
wzy
bactoprenol-linked glucose translocase
Accession:
QGU60045
Location: 2809861-2810235
NCBI BlastP on this gene
CUC38_14200
protein rfbJ
Accession:
CUC38_14205
Location: 2810298-2811236
NCBI BlastP on this gene
CUC38_14205
hypothetical protein
Accession:
QGU60046
Location: 2811407-2812006
NCBI BlastP on this gene
CUC38_14210
hypothetical protein
Accession:
CUC38_14215
Location: 2812107-2812659
NCBI BlastP on this gene
CUC38_14215
hypothetical protein
Accession:
QGU60047
Location: 2812656-2813015
NCBI BlastP on this gene
CUC38_14220
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession:
QGU60048
Location: 2813124-2814530
NCBI BlastP on this gene
CUC38_14225
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP024981
: Shigella flexneri strain 201 chromosome. Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QGU52023
Location: 2796040-2797320
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QGU52024
Location: 2797317-2798537
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QGU52025
Location: 2798548-2799942
NCBI BlastP on this gene
CUC40_14180
UTP--glucose-1-phosphate uridylyltransferase
Accession:
QGU52026
Location: 2800117-2801010
NCBI BlastP on this gene
CUC40_14185
hypothetical protein
Accession:
CUC40_14190
Location: 2801047-2801311
NCBI BlastP on this gene
CUC40_14190
dTDP-glucose 4,6-dehydratase
Accession:
QGU52027
Location: 2801383-2802468
NCBI BlastP on this gene
rfbB
NAD(P)-dependent oxidoreductase
Accession:
QGU52028
Location: 2802468-2803367
NCBI BlastP on this gene
CUC40_14200
glucose-1-phosphate thymidylyltransferase
Accession:
QGU52029
Location: 2803426-2804304
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
CUC40_14205
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QGU52030
Location: 2804309-2804854
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
QGU52031
Location: 2804870-2806126
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
QGU52032
Location: 2806156-2807046
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
CUC40_14220
dTDP-rhamnosyl transferase RfbG
Accession:
QGU53593
Location: 2807075-2807944
NCBI BlastP on this gene
CUC40_14225
O13/O129/O135 family O-antigen polymerase
Accession:
QGU52033
Location: 2807964-2809112
NCBI BlastP on this gene
wzy
bactoprenol-linked glucose translocase
Accession:
QGU52034
Location: 2809116-2809490
NCBI BlastP on this gene
CUC40_14235
protein rfbJ
Accession:
CUC40_14240
Location: 2809553-2810491
NCBI BlastP on this gene
CUC40_14240
hypothetical protein
Accession:
QGU52035
Location: 2810662-2811261
NCBI BlastP on this gene
CUC40_14245
hypothetical protein
Accession:
CUC40_14250
Location: 2811362-2811914
NCBI BlastP on this gene
CUC40_14250
hypothetical protein
Accession:
QGU52036
Location: 2811911-2812270
NCBI BlastP on this gene
CUC40_14255
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession:
QGU52037
Location: 2812379-2813785
NCBI BlastP on this gene
CUC40_14260
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP020342
: Shigella flexneri 1a strain 0439 chromosome Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
ASQ64717
Location: 2822506-2823786
NCBI BlastP on this gene
BS647_14840
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
ASQ62963
Location: 2823783-2825003
NCBI BlastP on this gene
BS647_14845
colanic acid biosynthesis protein WcaM
Accession:
ASQ62964
Location: 2825014-2826408
NCBI BlastP on this gene
BS647_14850
UTP--glucose-1-phosphate uridylyltransferase
Accession:
ASQ62965
Location: 2826583-2827476
NCBI BlastP on this gene
BS647_14855
dTDP-glucose 4,6-dehydratase
Accession:
ASQ62966
Location: 2827849-2828934
NCBI BlastP on this gene
BS647_14860
NAD(P)-dependent oxidoreductase
Accession:
ASQ62967
Location: 2828934-2829833
NCBI BlastP on this gene
BS647_14865
glucose-1-phosphate thymidylyltransferase
Accession:
ASQ62968
Location: 2829892-2830770
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
BS647_14870
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ASQ62969
Location: 2830775-2831320
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
BS647_14875
flippase
Accession:
ASQ62970
Location: 2831336-2832592
NCBI BlastP on this gene
BS647_14880
rhamnosyltransferase
Accession:
ASQ62971
Location: 2832622-2833512
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
BS647_14885
dTDP-rhamnosyl transferase RfbG
Accession:
ASQ64718
Location: 2833541-2834410
NCBI BlastP on this gene
BS647_14890
O-antigen polymerase
Accession:
ASQ62972
Location: 2834430-2835578
NCBI BlastP on this gene
BS647_14895
bactoprenol-linked glucose translocase
Accession:
ASQ62973
Location: 2835582-2835956
NCBI BlastP on this gene
BS647_14900
protein RfbJ
Accession:
ASQ62974
Location: 2836019-2836408
NCBI BlastP on this gene
BS647_14905
hypothetical protein
Accession:
ASQ64719
Location: 2836466-2836957
NCBI BlastP on this gene
BS647_14910
hypothetical protein
Accession:
ASQ62975
Location: 2837128-2837727
NCBI BlastP on this gene
BS647_14915
hypothetical protein
Accession:
ASQ64720
Location: 2837828-2838379
NCBI BlastP on this gene
BS647_14920
hypothetical protein
Accession:
ASQ62976
Location: 2838376-2838735
NCBI BlastP on this gene
BS647_14925
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession:
ASQ62977
Location: 2838844-2840250
NCBI BlastP on this gene
BS647_14930
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP020339
: Shigella flexneri 4c strain 0702 chromosome Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
ASQ60313
Location: 1452706-1453986
NCBI BlastP on this gene
BS653_08445
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
ASQ57495
Location: 1451489-1452709
NCBI BlastP on this gene
BS653_08440
colanic acid biosynthesis protein WcaM
Accession:
ASQ57494
Location: 1450084-1451478
NCBI BlastP on this gene
BS653_08435
UTP--glucose-1-phosphate uridylyltransferase
Accession:
ASQ57493
Location: 1449016-1449909
NCBI BlastP on this gene
BS653_08430
dTDP-glucose 4,6-dehydratase
Accession:
ASQ57492
Location: 1447558-1448643
NCBI BlastP on this gene
BS653_08425
NAD(P)-dependent oxidoreductase
Accession:
ASQ57491
Location: 1446659-1447558
NCBI BlastP on this gene
BS653_08420
glucose-1-phosphate thymidylyltransferase
Accession:
ASQ57490
Location: 1445722-1446600
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
BS653_08415
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ASQ57489
Location: 1445172-1445717
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
BS653_08410
flippase
Accession:
ASQ57488
Location: 1443900-1445156
NCBI BlastP on this gene
BS653_08405
rhamnosyltransferase
Accession:
ASQ57487
Location: 1442980-1443870
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
BS653_08400
dTDP-rhamnosyl transferase RfbG
Accession:
ASQ60312
Location: 1442082-1442951
NCBI BlastP on this gene
BS653_08395
O-antigen polymerase
Accession:
ASQ57486
Location: 1440914-1442062
NCBI BlastP on this gene
BS653_08390
bactoprenol-linked glucose translocase
Accession:
ASQ57485
Location: 1440536-1440910
NCBI BlastP on this gene
BS653_08385
protein rfbJ
Accession:
BS653_08380
Location: 1440085-1440473
NCBI BlastP on this gene
BS653_08380
hypothetical protein
Accession:
ASQ60311
Location: 1439536-1440027
NCBI BlastP on this gene
BS653_08375
hypothetical protein
Accession:
ASQ57484
Location: 1438766-1439365
NCBI BlastP on this gene
BS653_08370
hypothetical protein
Accession:
ASQ60310
Location: 1438114-1438665
NCBI BlastP on this gene
BS653_08365
hypothetical protein
Accession:
ASQ57483
Location: 1437758-1438117
NCBI BlastP on this gene
BS653_08360
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession:
ASQ57482
Location: 1436243-1437649
NCBI BlastP on this gene
BS653_08355
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP020336
: Shigella flexneri 4c strain 1602 chromosome Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
ASQ55816
Location: 2281338-2282618
NCBI BlastP on this gene
BS654_12995
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
ASQ53677
Location: 2280121-2281341
NCBI BlastP on this gene
BS654_12990
colanic acid biosynthesis protein WcaM
Accession:
ASQ53676
Location: 2278716-2280110
NCBI BlastP on this gene
BS654_12985
UTP--glucose-1-phosphate uridylyltransferase
Accession:
ASQ53675
Location: 2277648-2278541
NCBI BlastP on this gene
BS654_12980
dTDP-glucose 4,6-dehydratase
Accession:
ASQ53674
Location: 2276190-2277275
NCBI BlastP on this gene
BS654_12975
NAD(P)-dependent oxidoreductase
Accession:
ASQ53673
Location: 2275291-2276190
NCBI BlastP on this gene
BS654_12970
glucose-1-phosphate thymidylyltransferase
Accession:
ASQ53672
Location: 2274354-2275232
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
BS654_12965
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ASQ53671
Location: 2273804-2274349
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
BS654_12960
flippase
Accession:
ASQ53670
Location: 2272532-2273788
NCBI BlastP on this gene
BS654_12955
rhamnosyltransferase
Accession:
ASQ53669
Location: 2271612-2272502
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
BS654_12950
dTDP-rhamnosyl transferase RfbG
Accession:
ASQ55815
Location: 2270714-2271583
NCBI BlastP on this gene
BS654_12945
O-antigen polymerase
Accession:
ASQ53668
Location: 2269546-2270694
NCBI BlastP on this gene
BS654_12940
bactoprenol-linked glucose translocase
Accession:
ASQ53667
Location: 2269168-2269542
NCBI BlastP on this gene
BS654_12935
protein RfbJ
Accession:
ASQ53666
Location: 2268716-2269105
NCBI BlastP on this gene
BS654_12930
hypothetical protein
Accession:
ASQ55814
Location: 2268167-2268658
NCBI BlastP on this gene
BS654_12925
hypothetical protein
Accession:
ASQ53665
Location: 2267397-2267996
NCBI BlastP on this gene
BS654_12920
hypothetical protein
Accession:
ASQ55813
Location: 2266745-2267296
NCBI BlastP on this gene
BS654_12915
hypothetical protein
Accession:
ASQ53664
Location: 2266389-2266748
NCBI BlastP on this gene
BS654_12910
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession:
ASQ53663
Location: 2264874-2266280
NCBI BlastP on this gene
BS654_12905
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP020086
: Shigella flexneri 1a strain 0670 chromosome Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
ASQ83847
Location: 2276422-2277702
NCBI BlastP on this gene
B4376_11865
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
ASQ81663
Location: 2277699-2278919
NCBI BlastP on this gene
B4376_11870
colanic acid biosynthesis protein WcaM
Accession:
ASQ81664
Location: 2278930-2280324
NCBI BlastP on this gene
B4376_11875
UTP--glucose-1-phosphate uridylyltransferase
Accession:
ASQ81665
Location: 2280499-2281392
NCBI BlastP on this gene
B4376_11880
dTDP-glucose 4,6-dehydratase
Accession:
ASQ81666
Location: 2281765-2282850
NCBI BlastP on this gene
B4376_11885
NAD(P)-dependent oxidoreductase
Accession:
ASQ81667
Location: 2282850-2283749
NCBI BlastP on this gene
B4376_11890
glucose-1-phosphate thymidylyltransferase
Accession:
ASQ81668
Location: 2283808-2284686
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
B4376_11895
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ASQ81669
Location: 2284691-2285236
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
B4376_11900
flippase
Accession:
ASQ81670
Location: 2285252-2286508
NCBI BlastP on this gene
B4376_11905
rhamnosyltransferase
Accession:
ASQ81671
Location: 2286538-2287428
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
B4376_11910
dTDP-rhamnosyl transferase RfbG
Accession:
ASQ83848
Location: 2287457-2288326
NCBI BlastP on this gene
B4376_11915
O-antigen polymerase
Accession:
ASQ81672
Location: 2288346-2289494
NCBI BlastP on this gene
B4376_11920
bactoprenol-linked glucose translocase
Accession:
ASQ81673
Location: 2289498-2289872
NCBI BlastP on this gene
B4376_11925
protein RfbJ
Accession:
ASQ81674
Location: 2289935-2290324
NCBI BlastP on this gene
B4376_11930
hypothetical protein
Accession:
ASQ83849
Location: 2290382-2290873
NCBI BlastP on this gene
B4376_11935
hypothetical protein
Accession:
ASQ81675
Location: 2291044-2291643
NCBI BlastP on this gene
B4376_11940
hypothetical protein
Accession:
ASQ83850
Location: 2291744-2292295
NCBI BlastP on this gene
B4376_11945
hypothetical protein
Accession:
ASQ81676
Location: 2292292-2292651
NCBI BlastP on this gene
B4376_11950
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession:
ASQ81677
Location: 2292760-2294166
NCBI BlastP on this gene
B4376_11955
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP012735
: Shigella flexneri 1a strain 0228 Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
AMM78816
Location: 2799705-2800985
NCBI BlastP on this gene
AOT98_14320
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AMM78817
Location: 2800982-2802202
NCBI BlastP on this gene
AOT98_14325
colanic acid biosynthesis protein WcaM
Accession:
AMM78818
Location: 2802213-2803607
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AMM78819
Location: 2803782-2804675
NCBI BlastP on this gene
AOT98_14335
dTDP-glucose 4,6-dehydratase
Accession:
AMM78820
Location: 2805048-2806133
NCBI BlastP on this gene
AOT98_14340
dTDP-4-dehydrorhamnose reductase
Accession:
AMM78821
Location: 2806133-2807032
NCBI BlastP on this gene
AOT98_14345
glucose-1-phosphate thymidylyltransferase
Accession:
AMM78822
Location: 2807091-2807969
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AOT98_14350
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AMM78823
Location: 2807974-2808519
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
AOT98_14355
transporter
Accession:
AMM78824
Location: 2808535-2809791
NCBI BlastP on this gene
AOT98_14360
glycosyl transferase family 2
Accession:
AMM78825
Location: 2809821-2810711
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
AOT98_14365
glycosyl transferase
Accession:
AMM80754
Location: 2810740-2811609
NCBI BlastP on this gene
AOT98_14370
polymerase
Accession:
AMM78826
Location: 2811629-2812777
NCBI BlastP on this gene
AOT98_14375
translocase
Accession:
AMM78827
Location: 2812781-2813155
NCBI BlastP on this gene
AOT98_14380
protein rfbJ
Accession:
AMM78828
Location: 2813218-2813607
NCBI BlastP on this gene
AOT98_14385
hypothetical protein
Accession:
AMM80755
Location: 2813665-2814156
NCBI BlastP on this gene
AOT98_14390
hypothetical protein
Accession:
AMM78829
Location: 2814327-2814926
NCBI BlastP on this gene
AOT98_14395
hypothetical protein
Accession:
AMM78830
Location: 2815027-2815578
NCBI BlastP on this gene
AOT98_14400
hypothetical protein
Accession:
AMM78831
Location: 2815575-2815934
NCBI BlastP on this gene
AOT98_14405
6-phosphogluconate dehydrogenase
Accession:
AMM78832
Location: 2816043-2817449
NCBI BlastP on this gene
AOT98_14410
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP012140
: Shigella flexneri 4c strain 1205 Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession:
AMN62197
Location: 1100996-1102276
NCBI BlastP on this gene
AD871_05835
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AMN62198
Location: 1102273-1103493
NCBI BlastP on this gene
AD871_05840
colanic acid biosynthesis protein
Accession:
AMN62199
Location: 1103504-1104898
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AMN62200
Location: 1105073-1105966
NCBI BlastP on this gene
AD871_05850
dTDP-glucose 4,6-dehydratase
Accession:
AMN62201
Location: 1106339-1107424
NCBI BlastP on this gene
AD871_05855
dTDP-4-dehydrorhamnose reductase
Accession:
AMN62202
Location: 1107424-1108323
NCBI BlastP on this gene
AD871_05860
glucose-1-phosphate thymidylyltransferase
Accession:
AMN62203
Location: 1108382-1109260
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AD871_05865
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AMN62204
Location: 1109265-1109810
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
AD871_05870
transporter
Accession:
AMN62205
Location: 1109826-1111082
NCBI BlastP on this gene
AD871_05875
glycosyl transferase family 2
Accession:
AMN62206
Location: 1111112-1112002
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
AD871_05880
glycosyl transferase
Accession:
AMN62207
Location: 1111995-1112900
NCBI BlastP on this gene
AD871_05885
polymerase
Accession:
AMN62208
Location: 1112920-1114068
NCBI BlastP on this gene
AD871_05890
translocase
Accession:
AMN62209
Location: 1114072-1114446
NCBI BlastP on this gene
AD871_05895
protein rfbJ
Accession:
AMN62210
Location: 1114509-1114898
NCBI BlastP on this gene
AD871_05900
hypothetical protein
Accession:
AMN65563
Location: 1114956-1115447
NCBI BlastP on this gene
AD871_05905
hypothetical protein
Accession:
AMN62211
Location: 1115618-1116217
NCBI BlastP on this gene
AD871_05910
hypothetical protein
Accession:
AMN62212
Location: 1116318-1116869
NCBI BlastP on this gene
AD871_05915
hypothetical protein
Accession:
AMN62213
Location: 1116866-1117225
NCBI BlastP on this gene
AD871_05920
6-phosphogluconate dehydrogenase
Accession:
AMN62214
Location: 1117334-1118740
NCBI BlastP on this gene
AD871_05925
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP012137
: Shigella flexneri 2a strain 981 Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession:
AMN58485
Location: 2181589-2182869
NCBI BlastP on this gene
AD867_12315
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AMN58484
Location: 2180372-2181592
NCBI BlastP on this gene
AD867_12310
colanic acid biosynthesis protein
Accession:
AMN58483
Location: 2178967-2180361
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AMN58482
Location: 2177899-2178792
NCBI BlastP on this gene
AD867_12300
dTDP-glucose 4,6-dehydratase
Accession:
AMN58481
Location: 2176441-2177526
NCBI BlastP on this gene
AD867_12295
dTDP-4-dehydrorhamnose reductase
Accession:
AMN58480
Location: 2175542-2176441
NCBI BlastP on this gene
AD867_12290
glucose-1-phosphate thymidylyltransferase
Accession:
AMN58479
Location: 2174605-2175483
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
AD867_12285
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AMN58478
Location: 2174055-2174600
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
AD867_12280
transporter
Accession:
AMN58477
Location: 2172783-2174039
NCBI BlastP on this gene
AD867_12275
glycosyl transferase family 2
Accession:
AMN58476
Location: 2171863-2172753
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
AD867_12270
polymerase
Accession:
AMN58475
Location: 2169798-2170946
NCBI BlastP on this gene
AD867_12260
translocase
Accession:
AMN58474
Location: 2169420-2169794
NCBI BlastP on this gene
AD867_12255
hypothetical protein
Accession:
AMN60813
Location: 2168420-2168911
NCBI BlastP on this gene
AD867_12245
hypothetical protein
Accession:
AMN58473
Location: 2167650-2168249
NCBI BlastP on this gene
AD867_12240
hypothetical protein
Accession:
AMN58472
Location: 2166998-2167549
NCBI BlastP on this gene
AD867_12235
hypothetical protein
Accession:
AMN58471
Location: 2166642-2167001
NCBI BlastP on this gene
AD867_12230
6-phosphogluconate dehydrogenase
Accession:
AMN58470
Location: 2165127-2166533
NCBI BlastP on this gene
AD867_12225
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP007037
: Shigella flexneri G1663 Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession:
AKK54638
Location: 2108754-2110034
NCBI BlastP on this gene
SF2A_11580
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AKK54637
Location: 2107537-2108757
NCBI BlastP on this gene
SF2A_11575
colanic acid biosynthesis protein
Accession:
AKK54636
Location: 2106132-2107526
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase subunit GalU
Accession:
AKK54635
Location: 2105064-2105957
NCBI BlastP on this gene
SF2A_11565
dTDP-glucose 4,6-dehydratase
Accession:
AKK54634
Location: 2103606-2104691
NCBI BlastP on this gene
SF2A_11560
dTDP-4-dehydrorhamnose reductase
Accession:
AKK54633
Location: 2102707-2103606
NCBI BlastP on this gene
SF2A_11555
glucose-1-phosphate thymidylyltransferase
Accession:
AKK54632
Location: 2101770-2102648
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
SF2A_11550
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AKK54631
Location: 2101220-2101765
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
SF2A_11545
transporter
Accession:
AKK54630
Location: 2099948-2101204
NCBI BlastP on this gene
SF2A_11540
glycosyl transferase family 2
Accession:
AKK54629
Location: 2099028-2099918
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
SF2A_11535
glycosyl transferase
Accession:
AKK54628
Location: 2098130-2099035
NCBI BlastP on this gene
SF2A_11530
polymerase
Accession:
AKK54627
Location: 2096962-2098110
NCBI BlastP on this gene
SF2A_11525
translocase
Accession:
AKK54626
Location: 2096584-2096907
NCBI BlastP on this gene
SF2A_11520
hypothetical protein
Accession:
AKK54625
Location: 2094813-2095412
NCBI BlastP on this gene
SF2A_11510
membrane protein
Accession:
AKK54624
Location: 2094510-2094635
NCBI BlastP on this gene
SF2A_11505
hypothetical protein
Accession:
AKK54623
Location: 2093804-2094163
NCBI BlastP on this gene
SF2A_11500
6-phosphogluconate dehydrogenase
Accession:
AKK54622
Location: 2092289-2093695
NCBI BlastP on this gene
SF2A_11495
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP004057
: Shigella flexneri Shi06HN006 Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
WcaK
Accession:
AIL41236
Location: 2162031-2163311
NCBI BlastP on this gene
SFyv_3063
colanic acid biosynthesis glycosyl transferase
Accession:
AIL41235
Location: 2160814-2162034
NCBI BlastP on this gene
SFyv_3062
hypothetical protein
Accession:
AIL41234
Location: 2159409-2160803
NCBI BlastP on this gene
SFyv_3061
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AIL41233
Location: 2158341-2159234
NCBI BlastP on this gene
SFyv_3059
dTDP-glucose 4,6-dehydratase
Accession:
AIL41232
Location: 2156883-2157968
NCBI BlastP on this gene
SFyv_3058
dTDP-4-dehydrorhamnose reductase
Accession:
AIL41231
Location: 2155984-2156883
NCBI BlastP on this gene
SFyv_3057
Glucose-1-phosphate thymidylyltransferase 1
Accession:
AIL41230
Location: 2155047-2155925
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
SFyv_3055
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AIL41229
Location: 2154497-2155042
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
SFyv_3054
Putative O-antigen transporter
Accession:
AIL41228
Location: 2153225-2154481
NCBI BlastP on this gene
SFyv_3053
dTDP-rhamnosyl transferase
Accession:
AIL41227
Location: 2152305-2153195
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
SFyv_3052
dTDP-rhamnosyl transferase
Accession:
AIL41226
Location: 2151407-2152312
NCBI BlastP on this gene
SFyv_3051
6-phosphogluconate dehydrogenase, decarboxylating
Accession:
AIL41225
Location: 2145568-2146974
NCBI BlastP on this gene
SFyv_3047
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP001383
: Shigella flexneri 2002017 Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
putative galactokinase
Accession:
ADA74482
Location: 2177053-2178333
NCBI BlastP on this gene
wcaK
putative colanic acid biosynthesis glycosyl transferase
Accession:
ADA74481
Location: 2175836-2177056
NCBI BlastP on this gene
wcaL
Colanic acid biosynthesis protein wcaM
Accession:
ADA74480
Location: 2174431-2175825
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession:
ADA74479
Location: 2173363-2174256
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
ADA74478
Location: 2171905-2172990
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
ADA74477
Location: 2171006-2171905
NCBI BlastP on this gene
rfbD
Glucose-1-phosphate thymidylyltransferase 1
Accession:
ADA74476
Location: 2170069-2170947
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ADA74475
Location: 2169519-2170064
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
putative O-antigen transporter
Accession:
ADA74474
Location: 2168247-2169503
NCBI BlastP on this gene
SFxv_2336
dTDP-rhamnosyl transferase rfbF
Accession:
ADA74473
Location: 2167327-2168217
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
SFxv_2335
dTDP-rhamnosyl transferase rfbG
Accession:
ADA74472
Location: 2166429-2167334
NCBI BlastP on this gene
SFxv_2334
O-antigen polymerase
Accession:
ADA74471
Location: 2165261-2166409
NCBI BlastP on this gene
SFxv_2333
Bactoprenol-linked glucose translocase
Accession:
ADA74470
Location: 2164883-2165257
NCBI BlastP on this gene
SFxv_2332
Protein rfbJ
Accession:
ADA74469
Location: 2164431-2164820
NCBI BlastP on this gene
SFxv_2331
hypothetical protein
Accession:
ADA74468
Location: 2163882-2164373
NCBI BlastP on this gene
SFxv_2330
hypothetical protein
Accession:
ADA74467
Location: 2163112-2163711
NCBI BlastP on this gene
SFxv_2329
hypothetical protein
Accession:
ADA74466
Location: 2162460-2163011
NCBI BlastP on this gene
SFxv_2328
hypothetical protein
Accession:
ADA74465
Location: 2162104-2162463
NCBI BlastP on this gene
SFxv_2327
6-phosphogluconate dehydrogenase, decarboxylating
Accession:
ADA74464
Location: 2160589-2161995
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AE014073
: Shigella flexneri 2a str. 2457T Total score: 3.5 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
putative galactokinase
Accession:
AAP17476
Location: 2105618-2106898
NCBI BlastP on this gene
wcaK
putative colanic acid biosynthesis glycosyl transferase
Accession:
AAP17475
Location: 2104401-2105621
NCBI BlastP on this gene
wcaL
hypothetical protein
Accession:
AAP17474
Location: 2102996-2104390
NCBI BlastP on this gene
wcaM
UTP--glucose-1-P uridyltransferase
Accession:
AAP17473
Location: 2101928-2102821
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession:
AAP17472
Location: 2100470-2101555
NCBI BlastP on this gene
rfbB
dTDP-6-deoxy-L-mannose-dehydrogenase
Accession:
AAP17471
Location: 2099571-2100470
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase
Accession:
AAP17470
Location: 2098634-2099512
BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-6-deoxy-L-mannose-dehydrogenase
Accession:
AAP17469
Location: 2098085-2098630
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
polysaccharide biosynthesis protein
Accession:
AAP17468
Location: 2096813-2098069
NCBI BlastP on this gene
rfbE
dTDP-rhamnosyl transferase
Accession:
AAP17467
Location: 2095893-2096783
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
rfbF
dTDP-rhamnosyl transferase
Accession:
AAP17466
Location: 2094995-2095864
NCBI BlastP on this gene
rfbG
O-antigen polymerase
Accession:
AAP17465
Location: 2093827-2094975
NCBI BlastP on this gene
rfc
glycosyl translocase
Accession:
AAP17464
Location: 2093449-2093823
NCBI BlastP on this gene
rfbI
glycosyl transferase
Accession:
AAP17463
Location: 2092997-2093386
NCBI BlastP on this gene
rfbJ
hypothetical protein
Accession:
AAP17462
Location: 2092448-2092939
NCBI BlastP on this gene
S2216
hypothetical protein
Accession:
AAP17461
Location: 2091678-2092277
NCBI BlastP on this gene
S2215
hypothetical protein
Accession:
AAP17460
Location: 2091026-2091577
NCBI BlastP on this gene
S2214
hypothetical protein
Accession:
AAP17459
Location: 2090670-2091029
NCBI BlastP on this gene
S2213
gluconate-6-phosphate dehydrogenase
Accession:
AAP17458
Location: 2089155-2090561
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP045941
: Shigella flexneri 2a strain AUSMDU00010535 chromosome Total score: 3.5 Cumulative Blast bit score: 955
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
QGK12264
Location: 1838770-1840050
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
QGK12265
Location: 1840047-1841267
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
QGK12266
Location: 1841278-1842672
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession:
QGK12267
Location: 1842847-1843740
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QGK12268
Location: 1844113-1845198
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
QGK12269
Location: 1845198-1846097
NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession:
QGK12270
Location: 1846156-1847034
BlastP hit with rmlA
Percentage identity: 96 %
BlastP bit score: 584
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QGK12271
Location: 1847039-1847584
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
QGK12272
Location: 1847600-1848856
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
QGK12273
Location: 1848886-1849776
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 133
Sequence coverage: 88 %
E-value: 6e-33
NCBI BlastP on this gene
GJE14_08975
glycosyltransferase
Accession:
GJE14_08980
Location: 1849805-1850672
NCBI BlastP on this gene
GJE14_08980
O13/O129/O135 family O-antigen polymerase
Accession:
QGK12274
Location: 1850692-1851840
NCBI BlastP on this gene
wzy
bactoprenol-linked glucose translocase
Accession:
QGK12275
Location: 1851844-1852218
NCBI BlastP on this gene
GJE14_08990
glycosyltransferase
Accession:
GJE14_08995
Location: 1852281-1853219
NCBI BlastP on this gene
GJE14_08995
hypothetical protein
Accession:
QGK12276
Location: 1853390-1853989
NCBI BlastP on this gene
GJE14_09000
hypothetical protein
Accession:
GJE14_09005
Location: 1854090-1854642
NCBI BlastP on this gene
GJE14_09005
hypothetical protein
Accession:
QGK12277
Location: 1854639-1854998
NCBI BlastP on this gene
GJE14_09010
NADP-dependent phosphogluconate dehydrogenase
Accession:
QGK12278
Location: 1855107-1856513
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KY710729
: Proteus penneri strain G2658 O antigen gene cluster Total score: 3.5 Cumulative Blast bit score: 479
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
rmlD
Accession:
AXY99983
Location: 1632-2525
NCBI BlastP on this gene
AXY99983
rmlA
Accession:
AXY99984
Location: 2552-3430
NCBI BlastP on this gene
AXY99984
rmlC
Accession:
AXY99985
Location: 3433-3978
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 237
Sequence coverage: 96 %
E-value: 6e-76
NCBI BlastP on this gene
AXY99985
hypothetical protein
Accession:
AXY99986
Location: 3975-4949
BlastP hit with wbuD
Percentage identity: 35 %
BlastP bit score: 103
Sequence coverage: 49 %
E-value: 7e-22
NCBI BlastP on this gene
AXY99986
wzx
Accession:
AXY99987
Location: 4958-6481
NCBI BlastP on this gene
AXY99987
gt1
Accession:
AXY99988
Location: 6465-7412
NCBI BlastP on this gene
AXY99988
hypothetical protein
Accession:
AXY99989
Location: 7430-8554
NCBI BlastP on this gene
AXY99989
gt2
Accession:
AXY99990
Location: 8572-9456
NCBI BlastP on this gene
AXY99990
wzy
Accession:
AXY99991
Location: 9437-10486
NCBI BlastP on this gene
AXY99991
gt3
Accession:
AXY99992
Location: 10496-11398
BlastP hit with wbwV
Percentage identity: 32 %
BlastP bit score: 140
Sequence coverage: 92 %
E-value: 1e-35
NCBI BlastP on this gene
AXY99992
gt4
Accession:
AXY99993
Location: 11414-12571
NCBI BlastP on this gene
AXY99993
ugd
Accession:
AXY99994
Location: 12693-13859
NCBI BlastP on this gene
AXY99994
wenM
Accession:
AXY99995
Location: 13871-14374
NCBI BlastP on this gene
AXY99995
wenN
Accession:
AXY99996
Location: 14445-15002
NCBI BlastP on this gene
AXY99996
cysE
Accession:
AXY99997
Location: 15002-15835
NCBI BlastP on this gene
AXY99997
Query: Escherichia coli strain O146 O antigen gene cluster, complete
MK595727
: Enterobacter cloacae strain NCTC 11584 O antigen gene cluster Total score: 3.5 Cumulative Blast bit score: 466
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
UTP--glucose-1-phosphate uridylyltransferase
Accession:
QHR93233
Location: 1-897
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession:
QHR93234
Location: 1257-2342
NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession:
QHR93235
Location: 2342-3241
NCBI BlastP on this gene
rmlD
Glucose-1-phosphate thymidylyltransferase
Accession:
QHR93236
Location: 3294-4172
NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QHR93237
Location: 4176-4724
BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 6e-78
NCBI BlastP on this gene
rmlC
hypothetical protein
Accession:
QHR93238
Location: 4729-5712
BlastP hit with wbuD
Percentage identity: 32 %
BlastP bit score: 100
Sequence coverage: 51 %
E-value: 1e-20
NCBI BlastP on this gene
orf5
flippase
Accession:
QHR93239
Location: 5745-7247
NCBI BlastP on this gene
wzx
Polysaccharide pyruvyl transferase
Accession:
QHR93240
Location: 7250-8404
NCBI BlastP on this gene
orf7
Glycosyl transferase family 2
Accession:
QHR93241
Location: 8415-9308
NCBI BlastP on this gene
QHR93241
Glycosyl transferase family 2
Accession:
QHR93242
Location: 9295-10200
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 124
Sequence coverage: 100 %
E-value: 2e-29
NCBI BlastP on this gene
QHR93242
putative glycosyltransferase EpsE
Accession:
QHR93243
Location: 10211-11095
NCBI BlastP on this gene
QHR93243
O-antigen polymerase
Accession:
QHR93244
Location: 11114-12211
NCBI BlastP on this gene
wzy
6-phosphogluconate dehydrogenase,decarboxylating
Accession:
QHR93245
Location: 12315-13721
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
GU445927
: Escherichia coli serogroup O71 O-antigen gene cluster Total score: 3.0 Cumulative Blast bit score: 1023
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession:
ADI77024
Location: 1137-2222
BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 610
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
rmlB
RmlD
Accession:
ADI77025
Location: 2222-3121
NCBI BlastP on this gene
rmlD
RmlA
Accession:
ADI77026
Location: 3179-4051
NCBI BlastP on this gene
rmlA
WdaK
Accession:
ADI77027
Location: 4078-4887
BlastP hit with wbwW
Percentage identity: 50 %
BlastP bit score: 258
Sequence coverage: 98 %
E-value: 1e-81
NCBI BlastP on this gene
wdaK
RmlC
Accession:
ADI77028
Location: 4925-5473
NCBI BlastP on this gene
rmlC
QdtA
Accession:
ADI77029
Location: 5466-5864
NCBI BlastP on this gene
qdtA
QdtB
Accession:
ADI77030
Location: 5884-6990
NCBI BlastP on this gene
qdtB
Wzx
Accession:
ADI77031
Location: 6987-8261
NCBI BlastP on this gene
wzx
WdaN
Accession:
ADI77032
Location: 8248-9666
NCBI BlastP on this gene
wdaN
Wzy
Accession:
ADI77033
Location: 9666-10955
NCBI BlastP on this gene
wzy
WdaM
Accession:
ADI77034
Location: 10945-11775
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 155
Sequence coverage: 98 %
E-value: 2e-41
NCBI BlastP on this gene
wdaM
QdtC
Accession:
ADI77035
Location: 11778-12248
NCBI BlastP on this gene
qdtC
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP026399
: Escherichia coli strain ECONIH4 chromosome Total score: 3.0 Cumulative Blast bit score: 959
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
AUY05175
Location: 5222343-5223563
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession:
AUY05176
Location: 5223574-5224968
NCBI BlastP on this gene
C3F40_27555
UTP--glucose-1-phosphate uridylyltransferase
Accession:
AUY05177
Location: 5225143-5226036
NCBI BlastP on this gene
C3F40_27560
hypothetical protein
Accession:
C3F40_27565
Location: 5226073-5226337
NCBI BlastP on this gene
C3F40_27565
dTDP-glucose 4,6-dehydratase
Accession:
AUY05178
Location: 5226409-5227494
NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession:
AUY05179
Location: 5227494-5228393
BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 587
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
C3F40_27575
glucose-1-phosphate thymidylyltransferase
Accession:
C3F40_27580
Location: 5228452-5228637
NCBI BlastP on this gene
C3F40_27580
IS1634 family transposase ISSpu7
Accession:
AUY05180
Location: 5228767-5230377
NCBI BlastP on this gene
C3F40_27585
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
AUY05181
Location: 5231102-5231647
BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76
NCBI BlastP on this gene
rfbC
O13/O129/O135 family O-antigen flippase
Accession:
AUY05182
Location: 5231663-5232919
NCBI BlastP on this gene
wzx
rhamnosyltransferase
Accession:
AUY05183
Location: 5232949-5233839
BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 134
Sequence coverage: 88 %
E-value: 2e-33
NCBI BlastP on this gene
C3F40_27605
dTDP-rhamnosyl transferase RfbG
Accession:
AUY05463
Location: 5233868-5234737
NCBI BlastP on this gene
C3F40_27610
IS1634 family transposase ISSpu7
Accession:
AUY05184
Location: 5235474-5237084
NCBI BlastP on this gene
C3F40_27620
translocase
Accession:
AUY05185
Location: 5237677-5238051
NCBI BlastP on this gene
C3F40_27630
protein rfbJ
Accession:
AUY05186
Location: 5238114-5239040
NCBI BlastP on this gene
C3F40_27635
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP015594
: Acinetobacter sp. NCu2D-2 chromosome Total score: 3.0 Cumulative Blast bit score: 531
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
transposase
Accession:
ANF82889
Location: 2542794-2543726
NCBI BlastP on this gene
A3K93_12280
UDP-glucose 6-dehydrogenase
Accession:
ANF82888
Location: 2541325-2542491
NCBI BlastP on this gene
A3K93_12275
hypothetical protein
Accession:
ANF82887
Location: 2539753-2541279
BlastP hit with wzx
Percentage identity: 31 %
BlastP bit score: 194
Sequence coverage: 87 %
E-value: 2e-51
NCBI BlastP on this gene
A3K93_12270
coenzyme F420 hydrogenase
Accession:
ANF82886
Location: 2538422-2539756
NCBI BlastP on this gene
A3K93_12265
hypothetical protein
Accession:
ANF82885
Location: 2537287-2538414
NCBI BlastP on this gene
A3K93_12260
hypothetical protein
Accession:
ANF82884
Location: 2536316-2537290
NCBI BlastP on this gene
A3K93_12255
hypothetical protein
Accession:
ANF82883
Location: 2535095-2536147
NCBI BlastP on this gene
A3K93_12250
dTDP-glucose 4,6-dehydratase
Accession:
ANF82882
Location: 2533817-2534887
NCBI BlastP on this gene
A3K93_12245
dTDP-4-dehydrorhamnose reductase
Accession:
ANF82881
Location: 2532897-2533802
NCBI BlastP on this gene
A3K93_12240
glucose-1-phosphate thymidylyltransferase
Accession:
ANF82880
Location: 2531996-2532895
NCBI BlastP on this gene
A3K93_12235
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ANF82879
Location: 2531377-2531934
NCBI BlastP on this gene
A3K93_12230
hypothetical protein
Accession:
ANF82878
Location: 2530207-2531376
BlastP hit with wbwU
Percentage identity: 38 %
BlastP bit score: 175
Sequence coverage: 101 %
E-value: 3e-48
NCBI BlastP on this gene
A3K93_12225
hypothetical protein
Accession:
ANF82877
Location: 2529217-2530095
BlastP hit with wbwV
Percentage identity: 34 %
BlastP bit score: 162
Sequence coverage: 98 %
E-value: 1e-43
NCBI BlastP on this gene
A3K93_12220
glycosyl transferase
Accession:
ANF82876
Location: 2528409-2529209
NCBI BlastP on this gene
A3K93_12215
hypothetical protein
Accession:
ANF82875
Location: 2527739-2528380
NCBI BlastP on this gene
A3K93_12210
UTP--glucose-1-phosphate uridylyltransferase
Accession:
ANF82874
Location: 2526641-2527516
NCBI BlastP on this gene
A3K93_12205
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP034289
: Vibrio parahaemolyticus strain 20140722001-1 chromosome I Total score: 3.0 Cumulative Blast bit score: 411
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
LPS O-antigen length regulator
Accession:
QHH00468
Location: 3147022-3148002
NCBI BlastP on this gene
EHC64_15805
dTDP-glucose 4,6-dehydratase
Accession:
QHH00467
Location: 3145759-3146847
NCBI BlastP on this gene
rfbB
glucose-1-phosphate thymidylyltransferase
Accession:
QHH00466
Location: 3144872-3145759
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose reductase
Accession:
QHH00465
Location: 3143988-3144872
NCBI BlastP on this gene
rfbD
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QHH00464
Location: 3143423-3143983
NCBI BlastP on this gene
rfbC
nitroreductase family protein
Accession:
QHH00463
Location: 3142419-3143417
BlastP hit with wbuD
Percentage identity: 34 %
BlastP bit score: 147
Sequence coverage: 93 %
E-value: 3e-37
NCBI BlastP on this gene
EHC64_15780
glycosyltransferase
Accession:
QHH00462
Location: 3141251-3142414
NCBI BlastP on this gene
EHC64_15775
hypothetical protein
Accession:
QHH00461
Location: 3139885-3141258
NCBI BlastP on this gene
EHC64_15770
polysaccharide pyruvyl transferase family protein
Accession:
QHH00460
Location: 3138805-3139881
BlastP hit with wbuE
Percentage identity: 32 %
BlastP bit score: 128
Sequence coverage: 95 %
E-value: 4e-30
NCBI BlastP on this gene
EHC64_15765
hypothetical protein
Accession:
QHH00459
Location: 3137583-3138743
NCBI BlastP on this gene
EHC64_15760
glycosyltransferase family 2 protein
Accession:
QHH00458
Location: 3136624-3137505
BlastP hit with wbwV
Percentage identity: 31 %
BlastP bit score: 136
Sequence coverage: 84 %
E-value: 5e-34
NCBI BlastP on this gene
EHC64_15755
glycosyltransferase family 1 protein
Accession:
QHH00457
Location: 3135503-3136627
NCBI BlastP on this gene
EHC64_15750
NAD-dependent epimerase/dehydratase family protein
Accession:
QHH00456
Location: 3134586-3135506
NCBI BlastP on this gene
EHC64_15745
sugar transferase
Accession:
QHH00455
Location: 3134041-3134589
NCBI BlastP on this gene
EHC64_15740
polysaccharide biosynthesis protein
Accession:
QHH00454
Location: 3131933-3133879
NCBI BlastP on this gene
EHC64_15735
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP034285
: Vibrio parahaemolyticus strain 20140624012-1 chromosome I Total score: 3.0 Cumulative Blast bit score: 411
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
LPS O-antigen length regulator
Accession:
QHG95438
Location: 3047471-3048451
NCBI BlastP on this gene
EHC70_15145
dTDP-glucose 4,6-dehydratase
Accession:
QHG95437
Location: 3046208-3047296
NCBI BlastP on this gene
rfbB
glucose-1-phosphate thymidylyltransferase
Accession:
QHG95436
Location: 3045321-3046208
NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose reductase
Accession:
QHG95435
Location: 3044437-3045321
NCBI BlastP on this gene
rfbD
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
QHG95434
Location: 3043872-3044432
NCBI BlastP on this gene
rfbC
nitroreductase family protein
Accession:
QHG95433
Location: 3042868-3043866
BlastP hit with wbuD
Percentage identity: 34 %
BlastP bit score: 147
Sequence coverage: 93 %
E-value: 3e-37
NCBI BlastP on this gene
EHC70_15120
glycosyltransferase
Accession:
QHG95432
Location: 3041700-3042863
NCBI BlastP on this gene
EHC70_15115
hypothetical protein
Accession:
QHG95431
Location: 3040334-3041707
NCBI BlastP on this gene
EHC70_15110
polysaccharide pyruvyl transferase family protein
Accession:
QHG95430
Location: 3039254-3040330
BlastP hit with wbuE
Percentage identity: 32 %
BlastP bit score: 128
Sequence coverage: 95 %
E-value: 4e-30
NCBI BlastP on this gene
EHC70_15105
hypothetical protein
Accession:
QHG95429
Location: 3038033-3038371
NCBI BlastP on this gene
EHC70_15100
glycosyltransferase family 2 protein
Accession:
QHG95428
Location: 3037074-3037955
BlastP hit with wbwV
Percentage identity: 31 %
BlastP bit score: 136
Sequence coverage: 84 %
E-value: 5e-34
NCBI BlastP on this gene
EHC70_15095
glycosyltransferase family 1 protein
Accession:
QHG95427
Location: 3035953-3037077
NCBI BlastP on this gene
EHC70_15090
NAD-dependent epimerase/dehydratase family protein
Accession:
QHG95426
Location: 3035036-3035956
NCBI BlastP on this gene
EHC70_15085
sugar transferase
Accession:
QHG95425
Location: 3034491-3035039
NCBI BlastP on this gene
EHC70_15080
polysaccharide biosynthesis protein
Accession:
EHC70_15075
Location: 3032384-3034329
NCBI BlastP on this gene
EHC70_15075
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP016546
: Escherichia coli strain O177:H21 chromosome Total score: 2.5 Cumulative Blast bit score: 1212
Hit cluster cross-links:
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid exporter
Accession:
BB405_21690
Location: 4326002-4327479
NCBI BlastP on this gene
BB405_21690
colanic acid biosynthesis pyruvyl transferase WcaK
Accession:
ANW31319
Location: 4327852-4329132
NCBI BlastP on this gene
BB405_21695
colanic acid biosynthesis glycosyltransferase WcaL
Accession:
ANW31320
Location: 4329129-4330349
NCBI BlastP on this gene
BB405_21700
colanic acid biosynthesis protein WcaM
Accession:
ANW31321
Location: 4330360-4331754
NCBI BlastP on this gene
BB405_21705
GalU regulator GalF
Accession:
ANW31322
Location: 4331929-4332822
NCBI BlastP on this gene
BB405_21710
dTDP-glucose 4,6-dehydratase
Accession:
ANW31323
Location: 4333195-4334280
BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
BB405_21715
dTDP-4-dehydrorhamnose reductase
Accession:
ANW31324
Location: 4334280-4335179
BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 607
Sequence coverage: 100 %
E-value: 0.0
NCBI BlastP on this gene
BB405_21720
glucose-1-phosphate thymidylyltransferase
Accession:
ANW31325
Location: 4335237-4336127
NCBI BlastP on this gene
BB405_21725
transporter
Accession:
ANW31326
Location: 4336117-4337382
NCBI BlastP on this gene
BB405_21730
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession:
ANW31327
Location: 4337395-4337961
NCBI BlastP on this gene
BB405_21735
hypothetical protein
Accession:
ANW31328
Location: 4337942-4339228
NCBI BlastP on this gene
BB405_21740
hypothetical protein
Accession:
ANW31329
Location: 4339225-4340097
NCBI BlastP on this gene
BB405_21745
hypothetical protein
Accession:
ANW31330
Location: 4340069-4341256
NCBI BlastP on this gene
BB405_21750
UDP-N-acetylglucosamine
Accession:
ANW31331
Location: 4341261-4342295
NCBI BlastP on this gene
BB405_21755