CAZyme Gene Cluster: NC_000913.3|CGC13
CGC gene composition diagram |
Gene composition table |
Substrate predicted by dbCAN-sub |
Substrate predicted by dbCAN-PUL search |
Filtered homologs of dbCAN-PUL hits
CGC gene composition diagram
Gene detail information of NC_000913.3_659
NCBI Blastp with this gene.
Protein sequence: copy AA seq
Gene detail information of NC_000913.3_660
NCBI Blastp with this gene.
Protein sequence: copy AA seq
Gene detail information of NC_000913.3_661
NCBI Blastp with this gene.
Protein sequence: copy AA seq
Gene detail information of NC_000913.3_662
NCBI Blastp with this gene.
Protein sequence: copy AA seq
Gene detail information of NC_000913.3_663
NCBI Blastp with this gene.
Protein sequence: copy AA seq
Gene detail information of NC_000913.3_664
NCBI Blastp with this gene.
Protein sequence: copy AA seq
Gene composition table
| Protein ID | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|
| NC_000913.3_659 | CAZyme | 701603 | 702751 | - | CE9_e0|CE9 |
| NC_000913.3_660 | null | 702811 | 703611 | - | |
| NC_000913.3_661 | TC | 703944 | 705890 | + | 4.A.1.1.2 |
| NC_000913.3_662 | null | 705860 | 705982 | - | |
| NC_000913.3_663 | null | 706093 | 707757 | + | |
| NC_000913.3_664 | TC | 708334 | 709740 | + | 1.B.25.1.13 |
Substrate predicted by best dbCAN-PUL hit is glycosaminoglycan download this fig
All filtered homologs of dbCAN-PUL hits
| qseqid | sseqid | PULID | pident | length | mismatch | gapopen | qstart | qend | sstart | send | evalue | bitscore | qlen | slen |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_000913.3_659|CAZyme|CE9_e0;CE9 | PUL0579_2|CAZyme|CE9 | PUL0579 | 61.968 | 376 | 140 | 1 | 1 | 376 | 1 | 373 | 1.07e-173 | 487.0 | 383 | 378 |
| NC_000913.3_661|TC | PUL0579_3|TC | PUL0579 | 53.725 | 255 | 111 | 2 | 214 | 468 | 267 | 514 | 9.89e-80 | 260.0 | 649 | 523 |
| NC_000913.3_661|TC | PUL0579_3|TC | PUL0579 | 52.970 | 202 | 95 | 0 | 1 | 202 | 1 | 202 | 1.83e-56 | 198.0 | 649 | 523 |