CAZyme Gene Cluster: NC_000913.3|CGC30

CGC gene composition diagram | Gene composition table | Substrate predicted by dbCAN-sub |  Substrate predicted by dbCAN-PUL search  |  Filtered homologs of dbCAN-PUL hits  

CGC gene composition diagram

Gene composition table

Protein ID Type Start End Strand Signature
NC_000913.3_2021 CAZyme 2128904 2129650 - GT2
NC_000913.3_2022 null 2129661 2130878 -
NC_000913.3_2023 CAZyme 2130853 2132070 - GT4|GT4_e1042
NC_000913.3_2024 null 2132067 2132555 -
NC_000913.3_2025 CAZyme 2132558 2133397 - GT2
NC_000913.3_2026 TC 2133490 2135652 - 8.A.3.3.2
NC_000913.3_2027 null 2135655 2136098 -
NC_000913.3_2028 TC 2136104 2137243 - 1.B.18.3.1
NC_000913.3_2029 TC 2137902 2139485 + 2.A.109.2.3
NC_000913.3_2030 TC 2139759 2141612 - 9.B.22.2.1
NC_000913.3_2031 null 2141634 2142215 -
NC_000913.3_2032 null 2142307 2142948 -
NC_000913.3_2033 TC 2143266 2146583 + 9.B.34.1.8

Substrate predicted by best dbCAN-PUL hit is capsule polysaccharide synthesis download this fig


All filtered homologs of dbCAN-PUL hits

qseqid sseqid PULID pident length mismatch gapopen qstart qend sstart send evalue bitscore qlen slen
NC_000913.3_2024|null PUL0261_14|CDS PUL0261 36.486 74 47 0 71 144 87 160 5.92e-08 48.1 163 178
NC_000913.3_2025|CAZyme|GT2 PUL0261_15|CAZyme|GT2_Glycos_transf_2;GT2 PUL0261 34.375 96 62 1 1 96 1 95 3.33e-11 60.8 280 327
NC_000913.3_2025|CAZyme|GT2 PUL0261_7|CAZyme|GT2_Glycos_transf_2;GT2 PUL0261 34.259 108 67 2 4 107 5 112 8e-11 59.7 280 332
NC_000913.3_2024|null PUL0510_8|CDS PUL0510 36.782 87 52 2 72 158 96 179 2e-11 57.8 163 183
NC_000913.3_2024|null PUL0510_13|CDS PUL0510 30.323 155 99 4 9 158 28 178 5.02e-10 53.9 163 187
NC_000913.3_2025|CAZyme|GT2 PUL0510_7|CAZyme|GT2;GT2_Glycos_transf_2 PUL0510 37.500 104 64 1 4 107 5 107 3.44e-14 69.7 280 329
NC_000913.3_2025|CAZyme|GT2 PUL0510_5|CAZyme|GT2;GT2_Glycos_transf_2 PUL0510 33.333 99 61 3 7 103 3 98 1.85e-12 64.7 280 360
NC_000913.3_2025|CAZyme|GT2 PUL0510_6|CAZyme|GT2;GT2_Glycos_transf_2 PUL0510 32.039 103 66 3 3 103 2 102 2.38e-09 55.5 280 329
NC_000913.3_2025|CAZyme|GT2 PUL0062_8|CAZyme|GT2;GT2_Glycos_transf_2 PUL0062 33.684 95 56 4 7 96 4 96 9.7e-08 50.4 280 335
NC_000913.3_2026|TC PUL0062_2|TC PUL0062 36.872 716 413 11 13 700 7 711 3.29e-150 452.0 721 731
NC_000913.3_2027|null PUL0062_3|CDS PUL0062 40.741 135 79 1 4 138 5 138 2.99e-33 112.0 148 142
NC_000913.3_2028|TC PUL0062_4|TC PUL0062 32.086 374 228 10 2 366 1 357 1.92e-57 189.0 380 366
NC_000913.3_2025|CAZyme|GT2 PUL0060_10|CAZyme|GT2_Glycos_transf_2;GT2 PUL0060 33.010 103 62 4 7 104 4 104 4.4e-08 51.6 280 327
NC_000913.3_2026|TC PUL0060_4|TC PUL0060 36.439 719 417 12 13 703 7 713 5.52e-151 455.0 721 732
NC_000913.3_2027|null PUL0060_5|CDS PUL0060 39.416 137 82 1 2 138 3 138 4.88e-33 112.0 148 142
NC_000913.3_2028|TC PUL0060_6|TC PUL0060 31.467 375 229 9 2 366 1 357 1.59e-56 187.0 380 366
NC_000913.3_2025|CAZyme|GT2 PUL0061_9|CAZyme|GT2;GT2_Glycos_transf_2 PUL0061 40.404 99 59 0 5 103 6 104 5.44e-16 74.7 280 313
NC_000913.3_2026|TC PUL0061_2|TC PUL0061 36.872 716 413 11 13 700 7 711 5.89e-153 460.0 721 731
NC_000913.3_2027|null PUL0061_3|CDS PUL0061 40.741 135 79 1 4 138 5 138 2.3e-33 112.0 148 142
NC_000913.3_2028|TC PUL0061_4|TC PUL0061 30.645 372 236 8 2 366 28 384 1.26e-54 183.0 380 393
NC_000913.3_2025|CAZyme|GT2 PUL0286_11|CAZyme|GT2;GT2_Glycos_transf_2 PUL0286 39.252 107 63 1 6 112 25 129 6.46e-18 79.3 280 264
NC_000913.3_2026|TC PUL0286_16|TC PUL0286 40.284 705 396 7 14 715 11 693 1.23e-180 530.0 721 693
NC_000913.3_2027|null PUL0286_15|CDS PUL0286 53.623 138 64 0 1 138 1 138 9.52e-55 167.0 148 142
NC_000913.3_2028|TC PUL0286_14|TC PUL0286 56.021 382 158 2 6 379 3 382 4.66e-161 455.0 380 382