dbCAN3 server

Home
Annotate
GitHub
Download
Example result
Help
About us
AWS mirror site

CAZyme Gene Cluster: NC_000913.3|CGC4

CGC gene composition diagram | Gene composition table | Substrate predicted by dbCAN-sub | Substrate predicted by dbCAN-PUL search | Filtered homologs of dbCAN-PUL hits

CGC gene composition diagram

Gene detail information of NC_000913.3_144

Gene clsuter ID: NC_000913.3|CGC4
Gene ID: NC_000913.3_144
Location and strand information: 164730 - 167264 (+)
Family: GT51_e28|GT51
Protein type: CAZyme
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_145

Gene clsuter ID: NC_000913.3|CGC4
Gene ID: NC_000913.3_145
Location and strand information: 167484 - 169727 (+)
Family: 1.B.14.1.2
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_146

Gene clsuter ID: NC_000913.3|CGC4
Gene ID: NC_000913.3_146
Location and strand information: 169778 - 170575 (+)
Family: 3.A.1.14.3
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_147

Gene clsuter ID: NC_000913.3|CGC4
Gene ID: NC_000913.3_147
Location and strand information: 170575 - 171465 (+)
Family: 3.A.1.14.3
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_148

Gene clsuter ID: NC_000913.3|CGC4
Gene ID: NC_000913.3_148
Location and strand information: 171462 - 173444 (+)
Family: 3.A.1.14.3
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_149

Gene clsuter ID: NC_000913.3|CGC4
Gene ID: NC_000913.3_149
Location and strand information: 173602 - 174882 (-)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_150

Gene clsuter ID: NC_000913.3|CGC4
Gene ID: NC_000913.3_150
Location and strand information: 175107 - 176528 (+)
Family: 2.A.49.5.1
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_151

Gene clsuter ID: NC_000913.3|CGC4
Gene ID: NC_000913.3_151
Location and strand information: 176610 - 176954 (+)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_152

Gene clsuter ID: NC_000913.3|CGC4
Gene ID: NC_000913.3_152
Location and strand information: 177001 - 177624 (-)
Family: 1.A.62.2.2
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_153

Gene clsuter ID: NC_000913.3|CGC4
Gene ID: NC_000913.3_153
Location and strand information: 177662 - 178462 (-)
Family: 3.A.1.13.1
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene composition table

Protein ID	Type	Start	End	Strand	Signature
NC_000913.3_144	CAZyme	164730	167264	+	GT51_e28\|GT51
NC_000913.3_145	TC	167484	169727	+	1.B.14.1.2
NC_000913.3_146	TC	169778	170575	+	3.A.1.14.3
NC_000913.3_147	TC	170575	171465	+	3.A.1.14.3
NC_000913.3_148	TC	171462	173444	+	3.A.1.14.3
NC_000913.3_149	null	173602	174882	-
NC_000913.3_150	TC	175107	176528	+	2.A.49.5.1
NC_000913.3_151	null	176610	176954	+
NC_000913.3_152	TC	177001	177624	-	1.A.62.2.2
NC_000913.3_153	TC	177662	178462	-	3.A.1.13.1