CAZyme Gene Cluster: NC_000913.3|CGC43

CGC gene composition diagram | Gene composition table | Substrate predicted by dbCAN-sub |  Substrate predicted by dbCAN-PUL search  |  Filtered homologs of dbCAN-PUL hits  

CGC gene composition diagram

Gene composition table

Protein ID Type Start End Strand Signature
NC_000913.3_3068 TC 3280217 3280690 + 4.A.6.1.4
NC_000913.3_3069 TC 3280701 3281102 + 4.A.6.1.4
NC_000913.3_3070 CAZyme 3281170 3281625 + CE9|CE9_e34
NC_000913.3_3071 STP 3281976 3283130 + SIS+SIS
NC_000913.3_3072 null 3283143 3284003 +
NC_000913.3_3073 TC 3284170 3284646 + 4.A.6.1.5
NC_000913.3_3074 TC 3284685 3285488 + 4.A.6.1.5
NC_000913.3_3075 TC 3285478 3286269 + 4.A.6.1.5

Substrate predicted by best dbCAN-PUL hit is glycosaminoglycan download this fig


All filtered homologs of dbCAN-PUL hits

qseqid sseqid PULID pident length mismatch gapopen qstart qend sstart send evalue bitscore qlen slen
NC_000913.3_3068|TC PUL0196_7|TC PUL0196 32.903 155 103 1 4 157 3 157 3.41e-27 98.2 158 160
NC_000913.3_3069|TC PUL0196_8|TC PUL0196 36.486 74 47 0 20 93 19 92 7.37e-10 53.5 134 305
NC_000913.3_3070|CAZyme|CE9;CE9_e34 PUL0196_5|CAZyme|CE9 PUL0196 39.333 150 89 2 1 148 231 380 1.35e-23 92.8 152 386
NC_000913.3_3071|STP PUL0196_4|STP PUL0196 40.267 375 214 4 16 382 17 389 1.92e-94 286.0 385 393
NC_000913.3_3073|TC PUL0196_7|TC PUL0196 34.416 154 85 4 6 151 3 148 3.79e-24 90.5 159 160
NC_000913.3_3075|TC PUL0196_9|TC PUL0196 30.682 264 176 5 4 263 10 270 1.6e-36 129.0 264 273
NC_000913.3_3068|TC PUL0366_3|TC PUL0366 100.000 157 0 0 1 157 13 169 9.09e-115 320.0 158 169
NC_000913.3_3068|TC PUL0366_10|TC PUL0366 47.945 146 75 1 2 146 4 149 6.54e-41 133.0 158 158
NC_000913.3_3069|TC PUL0366_4|TC PUL0366 96.947 131 2 1 1 131 1 129 8.62e-83 241.0 134 259
NC_000913.3_3069|TC PUL0366_11|TC PUL0366 37.903 124 77 0 2 125 3 126 7.02e-25 94.0 134 267
NC_000913.3_3070|CAZyme|CE9;CE9_e34 PUL0366_7|CAZyme|CE9 PUL0366 98.675 151 2 0 1 151 234 384 1.58e-103 299.0 152 384
NC_000913.3_3071|STP PUL0366_8|STP PUL0366 99.740 384 1 0 1 384 1 384 0.0 794.0 385 384
NC_000913.3_3072|null PUL0366_9|CDS PUL0366 99.650 286 1 0 1 286 1 286 0.0 590.0 287 286
NC_000913.3_3073|TC PUL0366_10|TC PUL0366 100.000 158 0 0 1 158 1 158 9.17e-115 320.0 159 158
NC_000913.3_3073|TC PUL0366_3|TC PUL0366 47.945 146 75 1 4 149 14 158 1.33e-45 145.0 159 169
NC_000913.3_3074|TC PUL0366_11|TC PUL0366 99.625 267 1 0 1 267 1 267 0.0 532.0 268 267
NC_000913.3_3074|TC PUL0366_4|TC PUL0366 34.866 261 164 3 3 262 2 257 2.94e-50 164.0 268 259
NC_000913.3_3075|TC PUL0366_12|TC PUL0366 100.000 263 0 0 1 263 1 263 0.0 535.0 264 263
NC_000913.3_3075|TC PUL0366_5|TC PUL0366 41.634 257 146 4 1 256 32 285 3.05e-66 206.0 264 292