dbCAN3 server

Home
Annotate
GitHub
Download
Example result
Help
About us
AWS mirror site

CAZyme Gene Cluster: NC_000913.3|CGC45

CGC gene composition diagram | Gene composition table | Substrate predicted by dbCAN-sub | Substrate predicted by dbCAN-PUL search | Filtered homologs of dbCAN-PUL hits

CGC gene composition diagram

Gene detail information of NC_000913.3_3252

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3252
Location and strand information: 3453929 - 3455398 (-)
Family: 9.B.42.1.3
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3253

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3253
Location and strand information: 3455578 - 3456393 (+)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3254

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3254
Location and strand information: 3456377 - 3458329 (+)
Family: 1.B.22.1.3
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3255

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3255
Location and strand information: 3458339 - 3459820 (+)
Family: 3.A.15.1.1
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3256

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3256
Location and strand information: 3459817 - 3461013 (+)
Family: 3.A.15.1.1
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3257

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3257
Location and strand information: 3461023 - 3461460 (+)
Family: 3.A.15.1.1
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3258

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3258
Location and strand information: 3461468 - 3461977 (+)
Family: 3.A.15.1.1
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3259

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3259
Location and strand information: 3461974 - 3462351 (+)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3260

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3260
Location and strand information: 3462344 - 3462931 (+)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3261

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3261
Location and strand information: 3462924 - 3463907 (+)
Family: 3.A.15.1.1
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3262

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3262
Location and strand information: 3463922 - 3465085 (+)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3263

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3263
Location and strand information: 3465082 - 3465543 (+)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3264

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3264
Location and strand information: 3465543 - 3466220 (+)
Family: 3.A.15.2.1
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3265

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3265
Location and strand information: 3466249 - 3466725 (-)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3266

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3266
Location and strand information: 3466797 - 3466991 (-)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3267

Gene clsuter ID: NC_000913.3|CGC45
Gene ID: NC_000913.3_3267
Location and strand information: 3467160 - 3469853 (-)
Family: GH18_e193|CBM5
Protein type: CAZyme
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene composition table

Protein ID	Type	Start	End	Strand	Signature
NC_000913.3_3252	TC	3453929	3455398	-	9.B.42.1.3
NC_000913.3_3253	null	3455578	3456393	+
NC_000913.3_3254	TC	3456377	3458329	+	1.B.22.1.3
NC_000913.3_3255	TC	3458339	3459820	+	3.A.15.1.1
NC_000913.3_3256	TC	3459817	3461013	+	3.A.15.1.1
NC_000913.3_3257	TC	3461023	3461460	+	3.A.15.1.1
NC_000913.3_3258	TC	3461468	3461977	+	3.A.15.1.1
NC_000913.3_3259	null	3461974	3462351	+
NC_000913.3_3260	null	3462344	3462931	+
NC_000913.3_3261	TC	3462924	3463907	+	3.A.15.1.1
NC_000913.3_3262	null	3463922	3465085	+
NC_000913.3_3263	null	3465082	3465543	+
NC_000913.3_3264	TC	3465543	3466220	+	3.A.15.2.1
NC_000913.3_3265	null	3466249	3466725	-
NC_000913.3_3266	null	3466797	3466991	-
NC_000913.3_3267	CAZyme	3467160	3469853	-	GH18_e193\|CBM5