dbCAN3 server

Home
Annotate
GitHub
Download
Example result
Help
About us
AWS mirror site

CAZyme Gene Cluster: NC_000913.3|CGC9

CGC gene composition diagram | Gene composition table | Substrate predicted by dbCAN-sub | Substrate predicted by dbCAN-PUL search | Filtered homologs of dbCAN-PUL hits

CGC gene composition diagram

Gene detail information of NC_000913.3_355

Gene clsuter ID: NC_000913.3|CGC9
Gene ID: NC_000913.3_355
Location and strand information: 382739 - 383935 (-)
Family: GT2
Protein type: CAZyme
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_356

Gene clsuter ID: NC_000913.3|CGC9
Gene ID: NC_000913.3_356
Location and strand information: 383945 - 384043 (-)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_357

Gene clsuter ID: NC_000913.3|CGC9
Gene ID: NC_000913.3_357
Location and strand information: 384059 - 384616 (-)
Family: CE14_e27|CE14
Protein type: CAZyme
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_358

Gene clsuter ID: NC_000913.3|CGC9
Gene ID: NC_000913.3_358
Location and strand information: 385232 - 386194 (+)
Family: 3.A.1.17.1
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_359

Gene clsuter ID: NC_000913.3|CGC9
Gene ID: NC_000913.3_359
Location and strand information: 386207 - 386974 (+)
Family: 3.A.1.17.1
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_360

Gene clsuter ID: NC_000913.3|CGC9
Gene ID: NC_000913.3_360
Location and strand information: 386971 - 387798 (+)
Family: 3.A.1.17.1
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_361

Gene clsuter ID: NC_000913.3|CGC9
Gene ID: NC_000913.3_361
Location and strand information: 387795 - 388646 (+)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_362

Gene clsuter ID: NC_000913.3|CGC9
Gene ID: NC_000913.3_362
Location and strand information: 388753 - 389727 (-)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_363

Gene clsuter ID: NC_000913.3|CGC9
Gene ID: NC_000913.3_363
Location and strand information: 390251 - 391711 (+)
Family: 1.B.12.2.7
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_364

Gene clsuter ID: NC_000913.3|CGC9
Gene ID: NC_000913.3_364
Location and strand information: 391739 - 392605 (-)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_365

Gene clsuter ID: NC_000913.3|CGC9
Gene ID: NC_000913.3_365
Location and strand information: 392602 - 392901 (-)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_366

Gene clsuter ID: NC_000913.3|CGC9
Gene ID: NC_000913.3_366
Location and strand information: 393021 - 394418 (+)
Family: 1.B.12.2.7
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene composition table

Protein ID	Type	Start	End	Strand	Signature
NC_000913.3_355	CAZyme	382739	383935	-	GT2
NC_000913.3_356	null	383945	384043	-
NC_000913.3_357	CAZyme	384059	384616	-	CE14_e27\|CE14
NC_000913.3_358	TC	385232	386194	+	3.A.1.17.1
NC_000913.3_359	TC	386207	386974	+	3.A.1.17.1
NC_000913.3_360	TC	386971	387798	+	3.A.1.17.1
NC_000913.3_361	null	387795	388646	+
NC_000913.3_362	null	388753	389727	-
NC_000913.3_363	TC	390251	391711	+	1.B.12.2.7
NC_000913.3_364	null	391739	392605	-
NC_000913.3_365	null	392602	392901	-
NC_000913.3_366	TC	393021	394418	+	1.B.12.2.7