PUL ID |
PUL0083 |
PubMed |
31338125, Biotechnol Biofuels. 2019 Jul 15;12:183. doi: 10.1186/s13068-019-1522-8. eCollection 2019. |
Characterization method |
label-free quantitative proteomics,functional enrichment analysis,enzyme activity assay |
Genomic accession number |
ACXX02000019.1 |
Nucelotide position range |
49158-73811 |
Substrate |
lignocellulose |
Loci |
cpap_0250-0261 |
Species |
Ruminiclostridium papyrosolvens/29362 |
Degradation or Biosynthesis |
degradation |
Gene Name |
Locus Tag |
Protein ID |
Gene Position |
GenBank Contig Range |
EC Number |
- | Cpap_0250 | EGD45881.1 | 0 - 4290 (+) | ACXX02000019.1:49158-53448 | - |
- | Cpap_0251 | EGD45882.1 | 4404 - 6570 (+) | ACXX02000019.1:53562-55728 | - |
- | Cpap_0252 | EGD45883.1 | 6704 - 8087 (+) | ACXX02000019.1:55862-57245 | - |
- | Cpap_0253 | EGD45884.1 | 8141 - 10319 (+) | ACXX02000019.1:57299-59477 | - |
- | Cpap_0254 | EGD45885.1 | 10414 - 13072 (+) | ACXX02000019.1:59572-62230 | - |
- | Cpap_0255 | EGD45886.1 | 13235 - 13910 (+) | ACXX02000019.1:62393-63068 | - |
- | Cpap_0256 | EGD45887.1 | 13936 - 16150 (+) | ACXX02000019.1:63094-65308 | - |
- | Cpap_0257 | EGD45888.1 | 16293 - 18567 (+) | ACXX02000019.1:65451-67725 | - |
- | Cpap_0258 | EGD45889.1 | 18605 - 19880 (+) | ACXX02000019.1:67763-69038 | - |
- | Cpap_0259 | EGD45890.1 | 20011 - 21544 (+) | ACXX02000019.1:69169-70702 | - |
- | Cpap_0260 | EGD45891.1 | 21658 - 23026 (+) | ACXX02000019.1:70816-72184 | 3.2.1.78 |
- | Cpap_0261 | EGD45892.1 | 23052 - 24654 (+) | ACXX02000019.1:72210-73812 | - |
Cluster number |
0 | ||
Gene name |
Gene position |
Gene type |
Found by CGCFinder? |
- | 1 - 4290 (+) | CAZyme: cohesin|CBM3 | No |
- | 4405 - 6570 (+) | CAZyme: GH48 | No |
- | 6705 - 8087 (+) | CAZyme: GH8 | No |
- | 8142 - 10319 (+) | CAZyme: CBM3|GH9 | No |
- | 10415 - 13072 (+) | CAZyme: CBM4|CBM30|GH9 | No |
- | 13236 - 13910 (+) | CDS | No |
- | 13937 - 16150 (+) | CAZyme: CBM3|GH9 | No |
- | 16294 - 18567 (+) | CAZyme: CBM3|GH9 | No |
- | 18606 - 19880 (+) | CAZyme: GH5_17 | No |
- | 20012 - 21544 (+) | CAZyme: GH9 | No |
- | 21659 - 23026 (+) | CAZyme: GH5_7 | No |
- | 23053 - 24654 (+) | CAZyme: GH5_1 | No |
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