dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00453
Location and strand information: 574361 - 577444 (+)
Family: PL8_2|PL8
Protein type: CAZyme
Protein description: Chondroitin sulfate ABC exolyase
Protein isoelectric point: 7.4363
Protein molecular weight: 117187.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00454
Location and strand information: 577871 - 581038 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00455
Location and strand information: 581052 - 582854 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00456
Location and strand information: 582907 - 585882 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00457
Location and strand information: 585899 - 587578 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00458
Location and strand information: 587735 - 590140 (+)
Family: PL30
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4888
Protein molecular weight: 91286.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00459
Location and strand information: 590261 - 594265 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00460
Location and strand information: 594409 - 597159 (+)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.408
Protein molecular weight: 103489.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00461
Location and strand information: 597189 - 599576 (+)
Family: PL8_2|PL8
Protein type: CAZyme
Protein description: Chondroitin sulfate ABC endolyase
Protein isoelectric point: 6.7082
Protein molecular weight: 89744.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00462
Location and strand information: 599583 - 602054 (+)
Family: 4.2.2.1|PL30
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3428
Protein molecular weight: 92609.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00463
Location and strand information: 602107 - 602259 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00464
Location and strand information: 602540 - 603490 (-)
Family: null
Protein type: null
Protein description: tRNA-dihydrouridine(16) synthase

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00465
Location and strand information: 603793 - 606039 (-)
Family: GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8284
Protein molecular weight: 85505.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00466
Location and strand information: 606069 - 608552 (-)
Family: CBM51|GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.8787
Protein molecular weight: 93306.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00467
Location and strand information: 608662 - 611547 (-)
Family: PL8_2|PL8
Protein type: CAZyme
Protein description: Chondroitin sulfate ABC exolyase
Protein isoelectric point: 8.2375
Protein molecular weight: 109662.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00468
Location and strand information: 611811 - 614456 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.7615
Protein molecular weight: 99278.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00469
Location and strand information: 614562 - 615602 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00470
Location and strand information: 615634 - 617382 (-)
Family: 8.A.46.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002300_1|CGC8
Gene ID: MGYG000002300_00471
Location and strand information: 617404 - 620550 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002300_00453	PL8_e16\|4.2.2.20	hostglycan
MGYG000002300_00458
MGYG000002300_00460	GH92_e7
MGYG000002300_00461
MGYG000002300_00462
MGYG000002300_00465	GH95_e17
MGYG000002300_00466	GH95_e22\|CBM51_e13\|3.2.1.63	xyloglucan\|hostglycan
MGYG000002300_00467	PL8_e27
MGYG000002300_00468	GH2_e53

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is glycosaminoglycan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002300_00453	Chondroitin sulfate ABC exolyase	CAZyme	574361	577444	+	PL8_2\| PL8
MGYG000002300_00454	TonB-dependent receptor SusC	TC	577871	581038	+	1.B.14.6.1
MGYG000002300_00455	hypothetical protein	null	581052	582854	+	SusD-like_3\| SusD_RagB
MGYG000002300_00456	TonB-dependent receptor SusC	TC	582907	585882	+	1.B.14.6.1
MGYG000002300_00457	hypothetical protein	null	585899	587578	+	SusD-like_3\| SusD_RagB
MGYG000002300_00458	hypothetical protein	CAZyme	587735	590140	+	PL30
MGYG000002300_00459	Sensor histidine kinase RcsC	TF	590261	594265	-	HTH_AraC+HTH_AraC
MGYG000002300_00460	hypothetical protein	CAZyme	594409	597159	+	GH92
MGYG000002300_00461	Chondroitin sulfate ABC endolyase	CAZyme	597189	599576	+	PL8_2\| PL8
MGYG000002300_00462	hypothetical protein	CAZyme	599583	602054	+	4.2.2.1\| PL30
MGYG000002300_00463	hypothetical protein	null	602107	602259	+	No domain
MGYG000002300_00464	tRNA-dihydrouridine(16) synthase	null	602540	603490	-	Dus
MGYG000002300_00465	hypothetical protein	CAZyme	603793	606039	-	GH95
MGYG000002300_00466	hypothetical protein	CAZyme	606069	608552	-	CBM51\| GH95
MGYG000002300_00467	Chondroitin sulfate ABC exolyase	CAZyme	608662	611547	-	PL8_2\| PL8
MGYG000002300_00468	Beta-galactosidase	CAZyme	611811	614456	+	GH2
MGYG000002300_00469	hypothetical protein	null	614562	615602	-	DUF5017
MGYG000002300_00470	hypothetical protein	TC	615634	617382	-	8.A.46.1.3
MGYG000002300_00471	TonB-dependent receptor SusC	TC	617404	620550	-	1.B.14.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature