dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00060
Location and strand information: 88682 - 91555 (-)
Family: GH105|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.547
Protein molecular weight: 111066.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00061
Location and strand information: 91578 - 92891 (-)
Family: PL42|GH145
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.5966
Protein molecular weight: 49741.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00062
Location and strand information: 92905 - 96033 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.8681
Protein molecular weight: 119010.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00063
Location and strand information: 96049 - 97290 (-)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.0552
Protein molecular weight: 47745.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00064
Location and strand information: 97321 - 99234 (-)
Family: GH16|GH16_3|GH43_24|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9937
Protein molecular weight: 73299.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00065
Location and strand information: 99399 - 101429 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00066
Location and strand information: 101444 - 104692 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00067
Location and strand information: 105132 - 107534 (-)
Family: GH43_34|GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5602
Protein molecular weight: 89867.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00068
Location and strand information: 107555 - 111673 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00069
Location and strand information: 111745 - 114117 (-)
Family: GH146
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1372
Protein molecular weight: 89829.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00070
Location and strand information: 114150 - 114836 (-)
Family: null
Protein type: null
Protein description: Ktr system potassium uptake protein A

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00071
Location and strand information: 115028 - 117352 (-)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3B
Protein isoelectric point: 5.4168
Protein molecular weight: 86138.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00072
Location and strand information: 117383 - 118639 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00073
Location and strand information: 118664 - 120346 (-)
Family: 8.A.46.2.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00074
Location and strand information: 120387 - 123578 (-)
Family: 1.B.14.6.2
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00075
Location and strand information: 123596 - 124429 (-)
Family: GH16|GH16_3|3.2.1.6
Protein type: CAZyme
Protein description: Beta-glucanase
Protein isoelectric point: 5.3435
Protein molecular weight: 31103.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00076
Location and strand information: 124622 - 128647 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003064_1|CGC3
Gene ID: MGYG000003064_00077
Location and strand information: 128770 - 130599 (-)
Family: 2.A.38.4.1
Protein type: TC
Protein description: hypothetical protein

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003064_00060	GH105_e2\|3.2.1.-	pectin
MGYG000003064_00061	GH145_e0\|3.2.1.-
MGYG000003064_00062	GH2_e2\|3.2.1.23	beta-galactan
MGYG000003064_00063
MGYG000003064_00064	GH43_e135\|GH16_e47
MGYG000003064_00067	GH51_e23\|3.2.1.55	arabinan
MGYG000003064_00069	GH146_e10\|3.2.1.185	arabinan
MGYG000003064_00071	GH3_e114\|3.2.1.21	beta-glucan
MGYG000003064_00075	GH16_e42

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is beta-glucan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003064_00060	Beta-galactosidase	CAZyme	88682	91555	-	GH105\| GH2
MGYG000003064_00061	hypothetical protein	CAZyme	91578	92891	-	PL42\| GH145
MGYG000003064_00062	Beta-galactosidase	CAZyme	92905	96033	-	GH2
MGYG000003064_00063	hypothetical protein	CAZyme	96049	97290	-	GH154
MGYG000003064_00064	hypothetical protein	CAZyme	97321	99234	-	GH16\| GH16_3\| GH43_24\| GH43
MGYG000003064_00065	hypothetical protein	null	99399	101429	-	SusD-like_3\| SusD_RagB
MGYG000003064_00066	hypothetical protein	TC	101444	104692	-	1.B.14.6.1
MGYG000003064_00067	hypothetical protein	CAZyme	105132	107534	-	GH43_34\| GH51
MGYG000003064_00068	Sensor histidine kinase RcsC	TF	107555	111673	-	HTH_AraC
MGYG000003064_00069	hypothetical protein	CAZyme	111745	114117	-	GH146
MGYG000003064_00070	Ktr system potassium uptake protein A	null	114150	114836	-	TrkA_N
MGYG000003064_00071	Beta-glucosidase BoGH3B	CAZyme	115028	117352	-	GH3
MGYG000003064_00072	hypothetical protein	null	117383	118639	-	No domain
MGYG000003064_00073	hypothetical protein	TC	118664	120346	-	8.A.46.2.2
MGYG000003064_00074	TonB-dependent receptor SusC	TC	120387	123578	-	1.B.14.6.2
MGYG000003064_00075	Beta-glucanase	CAZyme	123596	124429	-	GH16\| GH16_3\| 3.2.1.6
MGYG000003064_00076	Sensor histidine kinase RcsC	TF	124622	128647	-	HTH_AraC+HTH_AraC
MGYG000003064_00077	hypothetical protein	TC	128770	130599	-	2.A.38.4.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature