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CAZyme Information: MGYG000000346_01473

You are here: Home > Sequence: MGYG000000346_01473

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; ;
CAZyme ID MGYG000000346_01473
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
597 62964.38 4.8089
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000346 2294646 MAG Sweden Europe
Gene Location Start: 655;  End: 2448  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000346_01473.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 181 558 9.5e-57 0.848

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 0.004 271 375 2 94
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBZ48778.1 9.98e-222 1 596 1 606
BAK28435.1 9.98e-222 1 596 1 606
QKI00169.1 9.98e-222 1 596 1 606
QWX86240.1 9.98e-222 1 596 1 606
CBI14069.1 8.09e-221 1 596 1 606

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 2.08e-11 250 407 93 242
ChainA, Pectate lyase [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1A6 5.40e-11 250 526 118 321
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 1.26e-10 250 407 118 267
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000242 0.999047 0.000243 0.000167 0.000149 0.000136

TMHMM  Annotations      download full data without filtering help

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