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CAZyme Information: MGYG000001549_01874

You are here: Home > Sequence: MGYG000001549_01874

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gracilibacillus phocaeensis
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_D; Amphibacillaceae; Gracilibacillus; Gracilibacillus phocaeensis
CAZyme ID MGYG000001549_01874
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
556 MGYG000001549_11|CGC8 61067.75 3.8728
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001549 4547476 Isolate not provided not provided
Gene Location Start: 384357;  End: 386027  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001549_01874.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 261 485 1.7e-64 0.9722222222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00933 Glyco_hydro_3 8.93e-107 201 523 1 316
Glycosyl hydrolase family 3 N terminal domain.
COG1472 BglX 9.50e-103 200 531 1 319
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK05337 PRK05337 5.51e-74 209 523 5 305
beta-hexosaminidase; Provisional
pfam14172 DUF4309 1.17e-14 57 190 1 130
Domain of unknown function (DUF4309). This family includes the B. subtilis YjgB protein, which is functionally uncharacterized. This is not a homolog of E. coli YjgB. Expression of B. subtilis YjgB is regulated by the alternative transcription factor sigma-B. This family is found in bacteria, and is approximately 140 amino acids in length.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASK63992.1 2.27e-235 31 554 32 570
ALX50660.1 1.26e-222 1 554 1 570
AKG05226.1 4.80e-177 59 554 51 549
AUS86492.1 1.11e-173 42 549 46 556
QSB09056.1 8.93e-173 52 543 55 550

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6K5J_A 1.19e-91 200 526 11 339
Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
3BMX_A 1.05e-88 200 556 42 421
Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A 3.04e-88 200 556 16 395
ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A 6.52e-88 200 556 46 425
Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
4ZM6_A 1.92e-68 201 542 8 355
Aunique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432],4ZM6_B A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40406 5.73e-88 200 556 42 421
Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823 1.09e-57 217 526 49 382
Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
Q0AF74 1.78e-52 216 525 12 325
Beta-hexosaminidase OS=Nitrosomonas eutropha (strain DSM 101675 / C91 / Nm57) OX=335283 GN=nagZ PE=3 SV=1
B2FPW9 5.06e-49 209 487 1 279
Beta-hexosaminidase OS=Stenotrophomonas maltophilia (strain K279a) OX=522373 GN=nagZ PE=3 SV=1
B4SRK3 5.06e-49 209 487 1 279
Beta-hexosaminidase OS=Stenotrophomonas maltophilia (strain R551-3) OX=391008 GN=nagZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000017 0.000007 0.000006 0.000000 0.000000 0.000001

TMHMM  Annotations      download full data without filtering help

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