CAZyme Information: MGYG000001553_02270

Basic Information

• Species: Clostridium_P mediterraneense
• Lineage: Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_P; Clostridium_P mediterraneense
• CAZyme ID: MGYG000001553_02270
• CAZy Family: GH3
• CAZyme Description: Beta-N-acetylglucosaminidase/beta-glucosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
584		65324.48	5.1118

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001553	3045114	Isolate	not provided	not provided

• Gene Location: Start: 1976407; End: 1978161 Strand: -

Full Sequence      

MREVDLKAKPFYLSDEDIKWVEDTIKGMTIEEKIGQLFVIMDKTPDGGKTAVETIKKYQP
GAARYMGGKAEDVYEQIKQYKEASKLPLLVACNCESGGDGAAKGGTYIATQAAAGAVIDD
KVAYNVGYVSGKESAAIGCNWAFGPVSDIFLNWRNTVINTRSYGNDPERVLEYSKAYIRG
LEQSKMVACTKHFPGDGIEERDQHLVMGVNDQTCEEWDNTFGKVYSGLIEDGLKSIMIGH
IALPSYSRKFVPGMTDAEIKPATLAPELLQNLLREQLGFNGLILTDASHMIGLTSAMPRK
EQVPRAIAAGCDMFLFFHHPEEDFKYMIDGYKKGIITEERLESALKRILGLKASMGLHKD
QENGELMPPKEDLSILGCEEHTNLAVDAAKRSITLVKDTENNLPLTPDTHKRLKVYYVTN
PQPLDMVFGNNSTKTSIKEELEAAGFEVDIHESYHDLSAKNGHNIKDIMNSMFSESVEQL
TSNYDAVMMFVEMKGYCQENVVRVQWSIGHGSEIPWYVKEIPTICVSLSQTTNLFDLPMM
KTFINAYGSSRTVIRETIKKIKGEEKFEGEYNETVFCGRWDARL

Enzyme Prediction     

No EC number prediction in MGYG000001553_02270.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	82	315	4.4e-51	0.9722222222222222

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG1472	BglX	5.46e-66	28	419	1	361	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933	Glyco_hydro_3	7.88e-59	29	351	1	316	Glycosyl hydrolase family 3 N terminal domain.
PRK05337	PRK05337	3.45e-29	121	321	97	284	beta-hexosaminidase; Provisional
PRK15098	PRK15098	4.70e-19	8	405	26	407	beta-glucosidase BglX.
PLN03080	PLN03080	5.87e-07	164	405	174	415	Probable beta-xylosidase; Provisional

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AQM59112.1	0.0	1	584	1	584
QCX33673.1	6.54e-229	4	583	4	565
BCJ94222.1	9.69e-227	4	583	3	578
ADQ14511.1	1.01e-223	4	583	2	567
AZP04845.1	6.69e-216	4	584	2	564

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5VQD_A	2.40e-134	1	584	1	567	Beta-glucosidephosphorylase BglX [unidentified],5VQE_A Beta-glucoside phosphorylase BglX bound to 2FGlc [unidentified]
4ZM6_A	3.81e-39	85	424	72	403	Aunique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432],4ZM6_B A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432]
3BMX_A	1.37e-36	25	415	39	457	Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A	5.05e-36	25	415	13	431	ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A	6.41e-36	25	415	43	461	Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q7WUL3	3.96e-130	4	584	2	564	Beta-N-acetylglucosaminidase/beta-glucosidase OS=Cellulomonas fimi OX=1708 GN=nag3 PE=1 SV=1
P40406	7.48e-36	25	415	39	457	Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
Q7NWB7	2.45e-26	121	322	101	290	Beta-hexosaminidase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) OX=243365 GN=nagZ PE=3 SV=1
Q3SKU2	2.40e-24	75	321	49	287	Beta-hexosaminidase OS=Thiobacillus denitrificans (strain ATCC 25259) OX=292415 GN=nagZ PE=3 SV=1
Q9JVT3	3.73e-23	115	321	99	293	Beta-hexosaminidase OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=nagZ PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000048	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001553_02270.