CAZyme Information: MGYG000001599_00076

Basic Information

• Species: Phocaeicola sp900544075
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900544075
• CAZyme ID: MGYG000001599_00076
• CAZy Family: GH105
• CAZyme Description: Unsaturated rhamnogalacturonyl hydrolase YteR

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
416		48195.53	6.3176

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001599	4213385	MAG	China	Asia

• Gene Location: Start: 137682; End: 138932 Strand: -

Full Sequence      

MKNNLIYTLALAGIALFGTACSQNNQTEPHQTTQIKNNSTDKPWSVRMVESEMARWPESW
QLDFQPKLKWDYCHGLELQAMLDVYDRYGNDRIYEYALAYADTMVNADGTIKMYKREEFS
LDRVNSGKFLFRIYEQTKDEKYRKALALMRSQFEDHPRNADGGFWHKKVYPNQVWLDGIY
MGAPFYAEYAFRNNEVNAYKDIINQFLMAARHTYDPKTDLYKHACDVSRKEKWADPVTGQ
SQHSWGRALGWYAMAFVDALEFIPQHEAGRDSMIMVLDKVAGQIKRLQDEKTGLWYQVLD
RSGDEGNYLESSCSVMFVYSLFKAVRKGYIDGSYLAVAEKGYKGILENFITTDENGMISI
TKACAVAGLGGKNYRMGDYDYYINEQIRDNDPKAVGPFILASLEWERLQEVRNILR

Enzyme Prediction     

EC	3.2.1.-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH105	62	407	1.6e-117	0.9849397590361446

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07470	Glyco_hydro_88	2.34e-123	44	409	1	343	Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225	YesR	2.11e-98	64	408	28	356	Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT45768.1	3.24e-246	39	412	28	401
QRQ48639.1	6.54e-246	39	412	28	401
AVM56437.1	1.82e-239	39	415	29	405
QDO69177.1	3.50e-236	1	415	1	403
QUT93209.1	2.02e-235	1	415	1	403

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4WU0_A	9.91e-110	70	408	23	361	StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
1NC5_A	1.52e-83	63	408	32	367	Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A	6.30e-83	63	408	22	357	ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
3K11_A	1.88e-18	158	413	183	418	Crystalstructure of Putative glycosyl hydrolase (NP_813087.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.80 A resolution [Bacteroides thetaiotaomicron VPI-5482]
3QWT_A	7.36e-18	134	348	122	331	ChainA, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
O34559	8.30e-83	63	408	32	367	Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6	1.41e-43	181	404	1	227	Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7	1.41e-43	181	404	1	227	24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000001	1.000070	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001599_00076.