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CAZyme Information: MGYG000001977_03541

You are here: Home > Sequence: MGYG000001977_03541

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides;
CAZyme ID MGYG000001977_03541
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
461 51497.41 7.0408
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001977 4322077 MAG Denmark Europe
Gene Location Start: 53;  End: 1438  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001977_03541.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 172 427 5e-31 0.76

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00295 Glyco_hydro_28 1.66e-04 203 394 100 274
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT34116.1 0.0 1 461 25 485
QUU00182.1 0.0 5 461 29 485
QEW35608.1 4.30e-273 2 461 26 477
QJR77947.1 6.34e-273 1 461 26 478
AII64697.1 1.28e-272 1 461 26 478

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000038 0.000003 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001977_03541.