CAZyme Information: MGYG000001998_00038

Basic Information

• Species: Lachnospira sp900552795
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp900552795
• CAZyme ID: MGYG000001998_00038
• CAZy Family: CBM48
• CAZyme Description: 1,4-alpha-glucan branching enzyme GlgB

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
787		90406.29	5.0237

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001998	2300661	MAG	Spain	Europe

• Gene Location: Start: 47573; End: 49936 Strand: +

Full Sequence      

MADKLYDLMNWPEIEAVVYSEADNPYNFLGGHVCKNGFLIQVFRPDAVAIQVSVQGIKKL
YQMEKVDEAGFFAVLIPLKKQADYELIIEDIKGIKTTVRDPYSFGCMLDEKNMKRFNLGT
GIDAYKFMGSHYMQADGVGGMHFAVWAPNAKRVSVVGEFNRWDGRIYQMQRNGDSGIFEL
FIPGMEPGISYCYEVKFKNGVIIRKLDPYACNIKNDTRAVSVAAQSTDEYKWNDKAWMNK
KEIFSDEAPVSICEIDIDDILKDDIVENVSEAGFNCVVITTAAACIDKRNTTEISAFFSP
HLSYEKPDMLQSVIDSFHQKNIAVIMDWYAAYLSQTPSGMIYFDGSYAYEKNWVRLYRQK
NIEVSTFDYDKPQVMTFLYSNFMFWLEKYHFDGMRINELASMLYLNYGRNAGEWIPNIYG
GNENLAAIEFVKGLSRLIDKCSRKPLLIAEDDSGWPCVTVPVKDGGLGFDYKQNDGWKKE
IVPFMELDPLFRKGSYEKLTYGMLYQYSENFILDFSRISDDWKERGLYDRMPLCGKTDEA
AEEIKKENLKAVLAFMYTHPGKKLINYKDCRRCADFIKKLNDLYISYTPMYELDNENDGF
EWVDNVSCEETVIAYERKSSSGDKLLNAINFTPVLRQDFRFGVPCKGKYKVVFCSDKSFN
GKEYRTEEYEYNGKADSVLVTLPPLGVICLVYESYSQIELEEIQIKKEAAMAKEKASLEA
KEAEKLKEEAIEHAKIAKEAEERAKEAAKEAVKAAKEAQKKASMAEKNSIRIDEEMKRRL
EALLRKE

Enzyme Prediction     

No EC number prediction in MGYG000001998_00038.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH13	269	566	9.5e-78	0.9667774086378738
CBM48	128	214	3.9e-18	0.9078947368421053

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK05402	PRK05402	0.0	13	694	5	725	1,4-alpha-glucan branching protein GlgB.
PRK12313	PRK12313	4.75e-151	107	693	6	628	1,4-alpha-glucan branching protein GlgB.
COG0296	GlgB	3.24e-123	103	690	1	626	1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].
PRK12568	PRK12568	5.01e-117	12	693	13	729	glycogen branching enzyme; Provisional
PRK14705	PRK14705	7.14e-106	14	686	508	1216	glycogen branching enzyme; Provisional

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ACR71776.1	6.67e-183	1	716	1	721
AOZ96491.1	5.49e-174	1	715	1	733
QNM06418.1	6.98e-166	1	716	1	758
SET97328.1	2.34e-164	1	688	1	738
QRV19504.1	2.56e-164	1	688	1	738

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5GQZ_A	2.46e-115	13	690	29	771	Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQW_A	3.44e-115	13	690	29	771	Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR5_A	3.44e-115	13	690	29	771	Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQU_A	3.44e-115	13	690	29	771	Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
6KLF_A	3.67e-115	13	690	5	747	ChainA, 1,4-alpha-glucan branching enzyme GlgB [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q2RR72	1.57e-131	14	690	10	730	1,4-alpha-glucan branching enzyme GlgB OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=glgB PE=3 SV=1
Q608L5	2.33e-126	12	690	12	723	1,4-alpha-glucan branching enzyme GlgB OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) OX=243233 GN=glgB PE=3 SV=1
Q3JCN0	2.27e-125	14	690	19	730	1,4-alpha-glucan branching enzyme GlgB OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107) OX=323261 GN=glgB PE=3 SV=1
Q81ZU6	1.76e-123	24	690	27	729	1,4-alpha-glucan branching enzyme GlgB OS=Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298) OX=228410 GN=glgB PE=3 SV=1
Q2YB47	3.41e-123	12	692	16	736	1,4-alpha-glucan branching enzyme GlgB OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71) OX=323848 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000085	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001998_00038.