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CAZyme Information: MGYG000002374_00631

You are here: Home > Sequence: MGYG000002374_00631

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Campylobacter testudinum
Lineage Bacteria; Campylobacterota; Campylobacteria; Campylobacterales; Campylobacteraceae; Campylobacter; Campylobacter testudinum
CAZyme ID MGYG000002374_00631
CAZy Family CE11
CAZyme Description UDP-3-O-acyl-N-acetylglucosamine deacetylase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
294 32485.29 5.1236
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002374 1770849 Isolate United States North America
Gene Location Start: 50274;  End: 51158  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002374_00631.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE11 3 270 8.7e-108 0.992619926199262

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK13186 lpxC 3.45e-161 1 286 2 289
UDP-3-O-acyl-N-acetylglucosamine deacetylase.
pfam03331 LpxC 2.20e-146 3 271 1 271
UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A.
COG0774 LpxC 1.24e-145 1 294 2 300
UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell wall/membrane/envelope biogenesis].
TIGR00325 lpxC 3.44e-127 1 294 1 297
UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK13188 PRK13188 1.94e-65 1 277 3 306
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QMS58990.1 6.97e-207 1 294 1 294
QNH09445.1 6.97e-207 1 294 1 294
QEL45482.1 6.97e-207 1 294 1 294
ALV65470.1 6.97e-207 1 294 1 294
AGZ82301.1 6.97e-207 1 294 1 294

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3NZK_A 1.31e-81 1 284 7 295
Structureof LpxC from Yersinia enterocolitica Complexed with CHIR090 Inhibitor [Yersinia enterocolitica],3NZK_B Structure of LpxC from Yersinia enterocolitica Complexed with CHIR090 Inhibitor [Yersinia enterocolitica]
4MDT_A 8.76e-81 1 283 2 289
Structureof LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_B Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_C Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_D Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli]
3P3G_A 1.06e-80 1 283 2 289
CrystalStructure of the Escherichia coli LpxC/LPC-009 complex [Escherichia coli IHE3034],3PS1_A Crystal structure of the Escherichia Coli LPXC/LPC-011 complex [Escherichia coli IHE3034],3PS2_A Crystal structure of the Escherichia Coli LPXC/LPC-012 complex [Escherichia coli IHE3034],3PS3_A Crystal structure of the Escherichia Coli LPXC/LPC-053 complex [Escherichia coli IHE3034],4IS9_A Crystal Structure of the Escherichia coli LpxC/L-161,240 complex [Escherichia coli IHE3034],4IS9_B Crystal Structure of the Escherichia coli LpxC/L-161,240 complex [Escherichia coli IHE3034],4ISA_A Crystal Structure of the Escherichia coli LpxC/BB-78485 complex [Escherichia coli IHE3034]
4MQY_A 1.24e-80 1 283 2 289
CrystalStructure of the Escherichia coli LpxC/LPC-138 complex [Escherichia coli]
5U39_A 1.46e-79 1 285 4 292
Pseudomonasaeruginosa LpxC in complex with CHIR-090 [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A0RQZ8 1.39e-207 1 294 1 294
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Campylobacter fetus subsp. fetus (strain 82-40) OX=360106 GN=lpxC PE=3 SV=1
A7I3V4 5.24e-164 1 294 1 294
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) OX=360107 GN=lpxC PE=3 SV=1
A7GZZ5 1.67e-160 1 294 1 294
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Campylobacter curvus (strain 525.92) OX=360105 GN=lpxC PE=3 SV=1
A7ZC65 3.91e-159 1 294 1 294
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Campylobacter concisus (strain 13826) OX=360104 GN=lpxC PE=3 SV=1
Q9PIZ5 6.16e-149 1 294 1 294
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) OX=192222 GN=lpxC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002374_00631.