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CAZyme Information: MGYG000002430_01160

You are here: Home > Sequence: MGYG000002430_01160

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Campylobacter_A concisus_L
Lineage Bacteria; Campylobacterota; Campylobacteria; Campylobacterales; Campylobacteraceae; Campylobacter_A; Campylobacter_A concisus_L
CAZyme ID MGYG000002430_01160
CAZy Family GH24
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
144 16090.73 9.1718
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002430 1891545 Isolate South Africa Africa
Gene Location Start: 302084;  End: 302518  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002430_01160.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH24 3 142 7e-16 0.9051094890510949

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00735 T4-like_lys 8.52e-23 2 139 1 135
bacteriophage T4-like lysozymes. Bacteriophage T4-like lysozymes hydrolyze the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc) in peptidoglycan heteropolymers of prokaryotic cell walls. Members include a variety of bacteriophages (T4, RB49, RB69, Aeh1), as well as Dictyostelium.
PHA02596 5 4.06e-16 1 139 173 324
baseplate hub subunit and tail lysozyme; Provisional
cd00737 lyz_endolysin_autolysin 2.68e-04 4 35 2 33
endolysin and autolysin. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan.
COG3772 RrrD 0.006 3 40 11 48
Phage-related lysozyme (muramidase), GH24 family [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCT99357.1 1.37e-71 1 143 1 143
AKT92067.1 4.01e-69 1 144 1 144
ALF47771.1 9.35e-63 1 144 1 144
ANE33770.1 8.70e-52 1 139 1 139
AVK80669.1 2.88e-50 1 139 1 139

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
174L_A 2.21e-12 1 140 1 150
ChainA, T4 LYSOZYME [Tequatrovirus T4],174L_B Chain B, T4 LYSOZYME [Tequatrovirus T4]
191L_A 3.10e-12 1 140 1 150
ChainA, LYSOZYME [Tequatrovirus T4]
6XC0_A 3.88e-12 1 139 1 154
ChainA, Lysozyme [Tequatrovirus T4],6XC0_B Chain B, Lysozyme [Tequatrovirus T4],6XC1_A Chain A, Lysozyme [Tequatrovirus T4]
7CN7_A 4.15e-12 1 139 13 166
ChainA, Baseplate central spike complex protein gp5 [Tequatrovirus T4]
209L_A 4.58e-12 1 140 1 153
ChainA, T4 LYSOZYME [Tequatrovirus T4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P16009 1.06e-10 1 139 174 327
Pre-baseplate central spike protein Gp5 OS=Enterobacteria phage T4 OX=10665 GN=5 PE=1 SV=2
P00720 5.00e-09 1 140 1 150
Endolysin OS=Enterobacteria phage T4 OX=10665 GN=E PE=1 SV=2
Q556F2 1.47e-06 5 140 7 158
Probable T4-type lysozyme 1 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0274831 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000072 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002430_01160.