CAZyme Information: MGYG000002506_05060

Basic Information

• Species: Escherichia coli_D
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli_D
• CAZyme ID: MGYG000002506_05060
• CAZy Family: GH23
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
169		19329.24	9.4297

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002506	5339468	Isolate	not provided	not provided

• Gene Location: Start: 133459; End: 133968 Strand: +

Full Sequence      

MKKWMLAICLMFINEICHATDCFDLAGWDYKIDPDLLRAISWKESRYRVNAIGINPVTGY
GSGLMQVDSQHFNELARYGIKPEHLTTDPCMNIYTGAYYLAIAFKKWGVTWEAVGAYNAG
FRKSERQNQRRLAYASEVYRIYTGIKSSKGIRLPATKKSLPEINSVQNN

Enzyme Prediction     

No EC number prediction in MGYG000002506_05060.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH23	33	148	2.5e-18	0.8296296296296296

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK13722	PRK13722	1.70e-123	1	169	1	169	lytic transglycosylase; Provisional
cd13400	LT_IagB-like	7.37e-45	30	143	1	108	Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.
PRK15328	PRK15328	2.29e-29	3	146	2	143	type III secretion system invasion protein IagB.
pfam01464	SLT	2.56e-19	26	135	4	113	Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
COG0741	MltE	4.93e-16	21	120	141	240	Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell wall/membrane/envelope biogenesis].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
APL26239.1	6.24e-123	1	169	1	169
ALN31188.1	6.24e-123	1	169	1	169
QEA03652.1	6.24e-123	1	169	1	169
QEG96877.1	6.24e-123	1	169	1	169
ASJ32565.1	6.24e-123	1	169	1	169

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4XP8_A	5.15e-14	21	105	2	87	Structureof EtgA D60N mutant [Escherichia coli]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P17738	2.07e-122	1	169	1	169	X polypeptide OS=Escherichia coli OX=562 GN=X PE=3 SV=1
P47737	8.44e-122	1	169	1	169	X polypeptide OS=Escherichia coli (strain K12) OX=83333 GN=yubQ PE=3 SV=1
Q00739	6.94e-121	1	169	1	169	X polypeptide OS=Escherichia coli OX=562 GN=X PE=3 SV=1
P14499	1.24e-114	1	169	1	169	X polypeptide OS=Escherichia coli OX=562 GN=X PE=3 SV=1
Q07568	8.36e-22	8	145	7	141	Protein IpgF OS=Shigella flexneri OX=623 GN=ipgF PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000492	0.998488	0.000425	0.000189	0.000183	0.000188

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002506_05060.