You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002533_03266
You are here: Home > Sequence: MGYG000002533_03266
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Vibrio vulnificus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio vulnificus | |||||||||||
| CAZyme ID | MGYG000002533_03266 | |||||||||||
| CAZy Family | PL22 | |||||||||||
| CAZyme Description | Oligogalacturonate lyase | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 131869; End: 133035 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL22 | 215 | 382 | 2.6e-81 | 0.630188679245283 |
| PL22 | 30 | 134 | 3.8e-32 | 0.3886792452830189 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam14583 | Pectate_lyase22 | 0.0 | 1 | 386 | 1 | 386 | Oligogalacturonate lyase. This is a family of oligogalacturonate lyases, referred to more generally as pectate lyase family 22. These proteins fold into 7-bladed beta-propellers. |
| COG0823 | TolB | 1.95e-33 | 1 | 376 | 58 | 420 | Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport]. |
| PRK00178 | tolB | 6.40e-07 | 245 | 383 | 206 | 319 | Tol-Pal system protein TolB. |
| PRK01742 | tolB | 1.24e-04 | 43 | 83 | 255 | 295 | Tol-Pal system protein TolB. |
| PRK04792 | tolB | 2.64e-04 | 224 | 378 | 206 | 333 | Tol-Pal system protein TolB. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QMV39057.1 | 8.67e-303 | 1 | 388 | 1 | 388 |
| BAC97404.1 | 2.48e-302 | 1 | 388 | 1 | 388 |
| AMG10359.1 | 2.48e-302 | 1 | 388 | 1 | 388 |
| AIL73340.1 | 2.48e-302 | 1 | 388 | 1 | 388 |
| AUJ36683.1 | 2.48e-302 | 1 | 388 | 1 | 388 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3C5M_A | 4.60e-274 | 2 | 388 | 2 | 388 | Crystalstructure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_B Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_C Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633] |
| 3PE7_A | 6.42e-217 | 1 | 383 | 1 | 383 | Oligogalacturonatelyase in complex with manganese [Yersinia enterocolitica subsp. enterocolitica 8081] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P21258 | 9.58e-214 | 1 | 383 | 1 | 383 | Oligogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=ogl PE=2 SV=2 |
| Q59418 | 9.60e-207 | 1 | 383 | 1 | 383 | Oligogalacturonide lyase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=ogl PE=4 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000038 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |