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CAZyme Information: MGYG000003094_02605
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phocaeicola barnesiae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola barnesiae | |||||||||||
| CAZyme ID | MGYG000003094_02605 | |||||||||||
| CAZy Family | GH16 | |||||||||||
| CAZyme Description | Keratan-sulfate endo-1,4-beta-galactosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 551; End: 1354 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH16 | 33 | 261 | 1.8e-51 | 0.9956521739130435 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd08023 | GH16_laminarinase_like | 1.48e-68 | 33 | 261 | 1 | 235 | Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans. |
| cd02182 | GH16_Strep_laminarinase_like | 1.28e-22 | 28 | 262 | 1 | 259 | Streptomyces laminarinase-like, member of glycosyl hydrolase family 16. Proteins similar to Streptomyces sioyaensis beta-1,3-glucanase (laminarinase) present in Actinomycetales as well as Peziomycotina. Laminarinases belong to glycosyl hydrolase family 16 and hydrolyze the glycosidic bond of the 1,3-beta-linked glucan, a major component of fungal and plant cell walls and the structural and storage polysaccharides (laminarin) of marine macro-algae. Members of the GH16 family have a conserved jelly roll fold with an active site channel. |
| cd00413 | Glyco_hydrolase_16 | 3.34e-22 | 35 | 261 | 1 | 210 | glycosyl hydrolase family 16. The O-Glycosyl hydrolases are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A glycosyl hydrolase classification system based on sequence similarity has led to the definition of more than 95 different families inlcuding glycosyl hydrolase family 16. Family 16 includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues. |
| COG2273 | BglS | 6.53e-18 | 29 | 265 | 41 | 267 | Beta-glucanase, GH16 family [Carbohydrate transport and metabolism]. |
| pfam00722 | Glyco_hydro_16 | 4.66e-13 | 70 | 259 | 8 | 168 | Glycosyl hydrolases family 16. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QRO23309.1 | 3.17e-169 | 1 | 262 | 1 | 262 |
| QUT87873.1 | 7.38e-122 | 16 | 264 | 13 | 258 |
| QJR58998.1 | 7.38e-122 | 16 | 264 | 13 | 258 |
| AII62548.1 | 7.38e-122 | 16 | 264 | 13 | 258 |
| QJR56204.1 | 7.38e-122 | 16 | 264 | 13 | 258 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6T2R_AAA | 1.56e-121 | 22 | 264 | 22 | 264 | ChainAAA, Beta-glycosidase [Bacteroides caccae] |
| 3ILN_A | 3.09e-30 | 29 | 263 | 5 | 249 | ChainA, Laminarinase [Rhodothermus marinus],3ILN_B Chain B, Laminarinase [Rhodothermus marinus] |
| 6T2S_AAA | 5.10e-29 | 31 | 259 | 2 | 236 | ChainAAA, Glycoside hydrolase family 16 protein [Bacteroides finegoldii DSM 17565],6T2S_BBB Chain BBB, Glycoside hydrolase family 16 protein [Bacteroides finegoldii DSM 17565],6T2S_CCC Chain CCC, Glycoside hydrolase family 16 protein [Bacteroides finegoldii DSM 17565] |
| 5WUT_A | 2.52e-27 | 26 | 262 | 2 | 235 | Crystalstructure of laminarinase from Flavobacterium sp. UMI-01 [Flavobacterium sp.],5WUT_B Crystal structure of laminarinase from Flavobacterium sp. UMI-01 [Flavobacterium sp.] |
| 2VY0_A | 4.72e-27 | 29 | 266 | 13 | 264 | TheX-ray structure of endo-beta-1,3-glucanase from Pyrococcus furiosus [Pyrococcus furiosus],2VY0_B The X-ray structure of endo-beta-1,3-glucanase from Pyrococcus furiosus [Pyrococcus furiosus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9ZG90 | 5.36e-42 | 26 | 262 | 53 | 288 | Keratan-sulfate endo-1,4-beta-galactosidase OS=Sphingobacterium multivorum OX=28454 PE=1 SV=1 |
| P45798 | 4.35e-32 | 8 | 263 | 17 | 284 | Beta-glucanase OS=Rhodothermus marinus OX=29549 GN=bglA PE=1 SV=1 |
| P23903 | 2.10e-26 | 27 | 262 | 421 | 680 | Glucan endo-1,3-beta-glucosidase A1 OS=Niallia circulans OX=1397 GN=glcA PE=1 SV=1 |
| Q9Z3Q2 | 1.05e-08 | 26 | 261 | 232 | 457 | Endo-1,3-1,4-beta-glycanase EglC OS=Rhizobium meliloti (strain 1021) OX=266834 GN=eglC PE=3 SV=2 |
| Q8N0N3 | 2.90e-08 | 104 | 239 | 143 | 303 | Beta-1,3-glucan-binding protein OS=Penaeus monodon OX=6687 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000152 | 0.028642 | 0.971179 | 0.000025 | 0.000027 | 0.000019 |