CAZyme Information: MGYG000003282_02442

Basic Information

• Species: Coprobacter sp900545915
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Coprobacteraceae; Coprobacter; Coprobacter sp900545915
• CAZyme ID: MGYG000003282_02442
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1283	MGYG000003282_43|CGC1	141186.67	6.0812

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003282	3080391	MAG	United States	North America

• Gene Location: Start: 28749; End: 32600 Strand: -

Full Sequence      

MKKTWRIVLPALLVGSFISFADTKDKREINDKVVTEEVCPCEMEGIDPEEAYNRSVTNAG
MYQQVSKETPKYLNPNIPIEERIDDLLPRLTLEEKVIQLSDSWGSKGIARLKIPAMLKTE
GLHGQSYATGSTIFPHGINMGSTFDTELIQEVGKATAIEAKAANLRVSWSPVLDVARDAR
WGRVEETYGEDPYLVGRIGVAWIKGFQGEHMFACPKHFAGHGQPVGGRDSHDYGLSDRVM
RNIHLAPFRDVIKEANAFGVMAAYGLWNGVPDNGSKELLQKILREEWGFEGFVVSDCSGP
ENIQRKQSVVSTMEEAAAMAVRAGVDIECGSAYKKALASAVKKGIIKESELDANLRRVFR
AKMRLGLFDKPSIENMVWNKLPEYDTPEHRALARKVAVESTVLLKNENNLLPLDKNIKTI
AVIGPNADQGQTGDYSAKYAPGQIISVLEGVKNHVSPSTKVLYAQGCTQLDMDTTGFAEA
VDVARQSDAVILVVGDNANRHENGNKKSTTGENVDGATLEIPGVQRQLIKAVEATGKPIV
LVLVNGKPFTLTWEDENIESILETWYPGEEGGNATADIIFGDENPSGRLPISFPRHPGQL
PLWYNYETSGRNYDYYDMPFTPLYRFGHGLSYTTFRYSNLKATPKNGDPGFVTVSVDIEN
TGKRSGEEVAQLYITDLVASVNTAVIDLKGFKRVFLKPGEKKTVTFELNPYLLSLLNPDM
KRVLEAGKFRMHVGGVCPEPPKGSTEHKQKIGFKDPSQGISGEFMVDKDYKADFEYTVSV
PKSVKGGESFKVVVKVTNNGNLLDIADVKLYGNSFLDDRRAEIEAGDTKEMVFDVQMYAS
GNQTLTVILDDQIKSVPLKVSKVPAKLVLEGSSIDMTEKGEMVYVAEARNVGSEPFNKNL
EVKVEGVTVASQPLHLDAGAGQRVEIKYAFPRSGTFRVKVGAETEQQLTVPGGIGLALQD
PLAYVTFEGATDKEVKNEITGKMLPIQGKAQIVDGKNGKGFKKDKKETFVDAGGMDLYRK
PFTLAAWVYLNQMDNGQAMFFGGQAPMGADVDVTGTRLAAGIFQEKTILSYENSDVRGNN
KLQSGKWVHYVYTYNPEKEEGAIYIDGRLDKKAFQKPFAGPLERIAGSQRFSSGKFIMDD
VLVARTTMDEKAVKELYTNGVEAMRKAQKVTDWRPMNSVVEKMKAWAELNAGGKIQVFVE
VADNSGKVIDSKSVQLKSGENEYSLAGLKKGDKVRLRIDLSSAAWDGVPALQTVVLEGSE
PIRWSTIEEWKKGSASNSLLIGL

Enzyme Prediction     

No EC number prediction in MGYG000003282_02442.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	107	329	4.1e-76	0.9814814814814815

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK15098	PRK15098	0.0	74	734	26	751	beta-glucosidase BglX.
PLN03080	PLN03080	1.08e-122	72	734	42	769	Probable beta-xylosidase; Provisional
COG1472	BglX	2.30e-89	59	461	7	397	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915	Glyco_hydro_3_C	9.76e-70	401	632	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933	Glyco_hydro_3	1.64e-67	110	361	63	316	Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGT74176.1	8.37e-235	71	833	165	929
QMW89388.1	6.56e-234	71	833	165	929
AAO76887.1	6.56e-234	71	833	165	929
QQA09894.1	7.44e-234	71	833	169	933
QUT39633.1	7.44e-234	71	833	169	933

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5YOT_A	2.06e-125	68	734	3	742	Isoprimeverose-producingenzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YOT_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_A Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40]
7EAP_A	1.48e-124	68	734	3	742	ChainA, Fn3_like domain-containing protein [Aspergillus oryzae RIB40]
5Z87_A	1.31e-123	109	734	119	771	ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
5TF0_A	1.97e-123	109	735	79	738	CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]
6R5I_A	1.21e-121	109	734	68	719	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KMH0	6.80e-149	74	734	28	707	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
Q56078	3.78e-133	74	746	63	763	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363	2.08e-129	108	746	99	763	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
T2KMH9	2.04e-110	63	749	20	756	Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1
A7LXU3	1.99e-100	96	751	100	784	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.008028	0.932146	0.058909	0.000304	0.000300	0.000286

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003282_02442.