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CAZyme Information: MGYG000003302_01248

You are here: Home > Sequence: MGYG000003302_01248

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA733 sp900539595
Lineage Bacteria; Firmicutes; Bacilli; RFN20; CAG-826; UBA733; UBA733 sp900539595
CAZyme ID MGYG000003302_01248
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
757 87027.57 4.8134
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003302 1776566 MAG China Asia
Gene Location Start: 208074;  End: 210347  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003302_01248.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 265 703 6.6e-41 0.8452380952380952

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 2.29e-07 360 685 5 326
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGY42778.1 8.52e-175 8 731 41 776
QHW31764.1 2.93e-158 5 747 2 772
QDH81296.1 4.92e-156 3 755 30 799
AJY74261.1 3.74e-155 4 714 17 739
QUH27875.1 1.01e-154 2 755 3 764

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000022 0.000003 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003302_01248.