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CAZyme Information: MGYG000003337_01006

You are here: Home > Sequence: MGYG000003337_01006

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_C sp900765125
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; Ruminococcus_C sp900765125
CAZyme ID MGYG000003337_01006
CAZy Family CBM4
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
939 105272.1 4.3788
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003337 2462692 MAG China Asia
Gene Location Start: 2238;  End: 5057  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003337_01006.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM4 801 919 2.1e-22 0.9206349206349206

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08757 CotH 2.45e-26 382 709 1 313
CotH kinase protein. Members of this family include the spore coat protein H (cotH). This protein is an atypical protein kinase that phosphorylates CotB and CotG.
pfam00932 LTD 1.85e-10 38 145 2 103
Lamin Tail Domain. The lamin-tail domain (LTD), which has an immunoglobulin (Ig) fold, is found in Nuclear Lamins, Chlo1887 from Chloroflexus, and several bacterial proteins where it occurs with membrane associated hydrolases of the metallo-beta-lactamase,synaptojanin, and calcineurin-like phosphoesterase superfamilies.
pfam13287 Fn3_assoc 1.43e-05 207 261 9 59
Fn3 associated.
pfam13290 CHB_HEX_C_1 3.08e-05 190 234 2 45
Chitobiase/beta-hexosaminidase C-terminal domain.
pfam02018 CBM_4_9 0.003 801 916 12 128
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADU21570.1 4.96e-119 38 695 31 673
QDV73863.1 9.88e-26 171 685 527 1050
QDV78493.1 9.88e-26 171 685 527 1050
QDU56968.1 1.23e-24 172 690 510 1038
ADU21608.1 9.93e-18 748 939 397 590

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000603 0.998528 0.000206 0.000244 0.000203 0.000183

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003337_01006.