dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000003351_02167

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Basic Information help

Species

Bacteroides sp900765785

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp900765785

CAZyme ID

MGYG000003351_02167

CAZy Family

GH109

CAZyme Description

Glycosyl hydrolase family 109 protein 1

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
466	MGYG000003351_240\|CGC1	52980.55	6.2615

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003351	6569749	MAG	China	Asia

Gene Location

Start: 3604; End: 5004 Strand: -

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000003351_02167.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH109	52	456	7e-165	0.9924812030075187

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG0673	MviM	7.57e-20	55	347	3	271	Predicted dehydrogenase [General function prediction only].
pfam01408	GFO_IDH_MocA	8.48e-14	56	181	1	117	Oxidoreductase family, NAD-binding Rossmann fold. This family of enzymes utilize NADP or NAD. This family is called the GFO/IDH/MOCA family in swiss-prot.
COG4091	COG4091	3.73e-08	56	153	18	129	Predicted homoserine dehydrogenase, contains C-terminal SAF domain [Amino acid transport and metabolism].

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUU06380.1	0.0	1	466	1	465
QQT78718.1	0.0	1	466	1	465
QRP59398.1	0.0	1	466	1	465
ASM67735.1	0.0	1	466	1	465
QIU92981.1	3.26e-317	1	466	1	466

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6T2B_A	6.56e-87	38	454	25	438	Glycosidehydrolase family 109 from Akkermansia muciniphila in complex with GalNAc and NAD+. [Akkermansia muciniphila],6T2B_B Glycoside hydrolase family 109 from Akkermansia muciniphila in complex with GalNAc and NAD+. [Akkermansia muciniphila],6T2B_C Glycoside hydrolase family 109 from Akkermansia muciniphila in complex with GalNAc and NAD+. [Akkermansia muciniphila],6T2B_D Glycoside hydrolase family 109 from Akkermansia muciniphila in complex with GalNAc and NAD+. [Akkermansia muciniphila]
2IXA_A	1.84e-66	56	454	21	431	A-zyme,N-acetylgalactosaminidase [Elizabethkingia meningoseptica],2IXB_A Crystal structure of N-ACETYLGALACTOSAMINIDASE in complex with GalNAC [Elizabethkingia meningoseptica]
6A3F_A	9.20e-08	107	254	71	222	Levoglucosandehydrogenase, apo form [Pseudarthrobacter phenanthrenivorans Sphe3],6A3F_B Levoglucosan dehydrogenase, apo form [Pseudarthrobacter phenanthrenivorans Sphe3],6A3G_A Levoglucosan dehydrogenase, complex with NADH [Pseudarthrobacter phenanthrenivorans Sphe3],6A3G_B Levoglucosan dehydrogenase, complex with NADH [Pseudarthrobacter phenanthrenivorans Sphe3],6A3G_C Levoglucosan dehydrogenase, complex with NADH [Pseudarthrobacter phenanthrenivorans Sphe3],6A3G_D Levoglucosan dehydrogenase, complex with NADH [Pseudarthrobacter phenanthrenivorans Sphe3],6A3I_A Levoglucosan dehydrogenase, complex with NADH and levoglucosan [Pseudarthrobacter phenanthrenivorans Sphe3],6A3I_B Levoglucosan dehydrogenase, complex with NADH and levoglucosan [Pseudarthrobacter phenanthrenivorans Sphe3],6A3I_C Levoglucosan dehydrogenase, complex with NADH and levoglucosan [Pseudarthrobacter phenanthrenivorans Sphe3],6A3I_D Levoglucosan dehydrogenase, complex with NADH and levoglucosan [Pseudarthrobacter phenanthrenivorans Sphe3],6A3J_A Levoglucosan dehydrogenase, complex with NADH and L-sorbose [Pseudarthrobacter phenanthrenivorans Sphe3],6A3J_B Levoglucosan dehydrogenase, complex with NADH and L-sorbose [Pseudarthrobacter phenanthrenivorans Sphe3],6A3J_C Levoglucosan dehydrogenase, complex with NADH and L-sorbose [Pseudarthrobacter phenanthrenivorans Sphe3],6A3J_D Levoglucosan dehydrogenase, complex with NADH and L-sorbose [Pseudarthrobacter phenanthrenivorans Sphe3]
4H3V_A	1.16e-07	87	215	39	167	ChainA, Oxidoreductase domain protein [Kribbella flavida DSM 17836],4H3V_B Chain B, Oxidoreductase domain protein [Kribbella flavida DSM 17836]
3E9M_A	2.21e-07	53	213	3	154	CrystalStructure of an oxidoreductase from Enterococcus faecalis [Enterococcus faecalis],3E9M_B Crystal Structure of an oxidoreductase from Enterococcus faecalis [Enterococcus faecalis],3E9M_C Crystal Structure of an oxidoreductase from Enterococcus faecalis [Enterococcus faecalis],3E9M_D Crystal Structure of an oxidoreductase from Enterococcus faecalis [Enterococcus faecalis]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q89ZX8	6.44e-284	22	466	23	467	Glycosyl hydrolase family 109 protein 1 OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=BT_4243 PE=3 SV=1
Q5LGZ0	3.03e-279	5	466	2	464	Glycosyl hydrolase family 109 protein 1 OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=BF0853 PE=1 SV=1
P0C863	3.03e-279	5	466	2	464	Glycosyl hydrolase family 109 protein 1 OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=BF0931 PE=3 SV=1
Q7MWF4	9.73e-263	30	466	32	468	Glycosyl hydrolase family 109 protein OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) OX=242619 GN=PG_0664 PE=3 SV=2
A6KX96	6.94e-259	30	466	35	471	Glycosyl hydrolase family 109 protein 1 OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=BVU_0340 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000002	1.000024	0.000000	0.000000	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000003351_02167.