CAZyme Information: MGYG000003362_03200

Basic Information

• Species: Dysgonomonas sp900079735
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Dysgonomonas; Dysgonomonas sp900079735
• CAZyme ID: MGYG000003362_03200
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1015	MGYG000003362_23|CGC5	112086.61	7.4557

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003362	3888864	MAG	United States	North America

• Gene Location: Start: 203800; End: 206847 Strand: +

Full Sequence      

MKIKYIAAATAFFATICLNVAALGSKTTTLYDTVDKEKMGHWVDSVYNQMSLDERIGQLF
MPIVSGDNTESNKNTIKNLITSQYVGGLLFSKGSPQNQAELTNYAQQVAKTPLMISLDGE
WGLSMRLDNTTQFPRNMMLGAIQNDSLLYYYGFEVARQCRQIGVQVNFAPALDVNSNPDN
PVIGNRSFGEDPDRVAQLGVMYSKGLEAGGVMAVAKHFPGHGDTSTDSHKTLPTITHDKD
RLDDFEIKPFRKYIDAGLSGMMIGHLNIPALDPKRQPSSLSEPITTKLLQNDLGFSGLIF
TDGLQMKGVSGEDNYCVRALLAGNDVLLGPVNTAKEFNAVKKAIADTLLRESQIEVKCKK
VLAYKYILGLNHVTTIEASGLIQSLNNANAEWINRNLHRDAMTLIKDDDKIVPLKGLDKR
KIAAISIGASVDNTFHNILKMYGDVTCFNVSDSDALLQLKKVLEPYNTIIVSVHTTRTNF
STAIQNVMQGKETVLAFFLNPYRIAAYASAVKNADGVLLAYEDTDLAQNYAAQAIFGGNA
ITGKAPVTVKGVFKEGKGINTKKIRLSYTVPEDVGIATSRLDGIETIVQEGIKAQAFPGC
QILIAKDGEVIYNKSFGSFEYDGKQKVTNTDLYDLASMTKATATVPAVMKLYDDAKLKLN
TPISNYVSVLKGTDKSDITVRDALLHESRLPAFIPYYMTAIDEDSYEGKLFNRTQTSLYS
AQFDANTWARTDYKFKPSMVSQTPKAGFLPLAEGLYINETYSDTIISEIAKSKLSKRKQY
VYSCLNFMLLKEVVEKISKEDLNTFVQENFFSKLGATTTTYNPLTKFDKQRIVPTEKDDF
LRKQLLQGYVHDEGAAFMGGISGNAGLFSDANDIAKLYQMWLNMGTYGGEEYLSPKTCQL
FLQAKSGISRRGLGFDKPETTTCKSSPTALSAPAGTYGHTGFTGTCFWVDPDNNLIYIFL
SNRVNDKRTHNAISTLNIRTRIQEEIYSAMKKGTVSQETNITNTNTNDKQKTDAE

Enzyme Prediction     

EC	3.2.1.-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	106	328	8.9e-57	0.9768518518518519

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00933	Glyco_hydro_3	1.34e-70	51	362	1	314	Glycosyl hydrolase family 3 N terminal domain.
COG1472	BglX	2.35e-69	50	431	1	366	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK03642	PRK03642	7.76e-54	571	963	30	395	putative periplasmic esterase; Provisional
PRK05337	PRK05337	1.01e-39	85	328	26	278	beta-hexosaminidase; Provisional
pfam00144	Beta-lactamase	3.13e-39	584	963	1	308	Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIK59886.1	0.0	12	992	9	993
QIK54477.1	0.0	12	992	9	993
SCD21261.1	0.0	27	991	27	985
CEA16485.1	0.0	12	990	9	981
QIX64335.1	0.0	17	992	11	993

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6K5J_A	1.88e-61	50	549	11	533	Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
3BMX_A	3.44e-61	44	440	36	477	Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A	9.88e-61	44	440	10	451	ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A	1.78e-60	44	440	40	481	Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
3SQL_A	5.02e-53	70	354	44	335	CrystalStructure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQL_B Crystal Structure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQM_A Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_B Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_C Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_D Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P40406	1.88e-60	44	440	36	477	Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823	4.30e-47	76	415	55	426	Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
Q8XBJ0	5.61e-42	566	963	25	395	Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli O157:H7 OX=83334 GN=yfeW PE=3 SV=1
Q7WUL3	2.21e-41	42	414	18	398	Beta-N-acetylglucosaminidase/beta-glucosidase OS=Cellulomonas fimi OX=1708 GN=nag3 PE=1 SV=1
P77619	2.83e-40	566	963	25	395	Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli (strain K12) OX=83333 GN=yfeW PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.193533	0.500199	0.304349	0.000525	0.000476	0.000911

TMHMM  Annotations     

start	end
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