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CAZyme Information: MGYG000003375_00540

You are here: Home > Sequence: MGYG000003375_00540

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Corynebacterium striatum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium striatum
CAZyme ID MGYG000003375_00540
CAZy Family GT85
CAZyme Description Galactan 5-O-arabinofuranosyltransferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
656 71922.32 6.3105
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003375 2788808 MAG United States North America
Gene Location Start: 110247;  End: 112217  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003375_00540.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT85 35 472 8.6e-163 0.990632318501171

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam12250 AftA_N 0.0 35 468 3 424
Arabinofuranosyltransferase N terminal. This domain family is found in bacteria, and is typically between 430 and 441 amino acids in length. This family is the N terminal region of AftA. The enzyme catalyzes the addition of the first key arabinofuranosyl residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol to the galactan domain of the cell wall, thus priming the galactan for further elaboration by the arabinofuranosyltransferases. The N terminal region has been predicted to span 11 transmembrane regions.
pfam12249 AftA_C 5.50e-93 478 654 1 177
Arabinofuranosyltransferase A C terminal. This domain family is found in bacteria, and is typically between 179 and 190 amino acids in length. This family is the C terminal region of AftA. The enzyme catalyzes the addition of the first key arabinofuranosyl residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol to the galactan domain of the cell wall, thus priming the galactan for further elaboration by the arabinofuranosyltransferases. The C terminal region is predicted to be directed towards the periplasm.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQE52412.1 0.0 1 656 1 656
ATZ06495.1 0.0 7 656 1 650
ATZ09117.1 0.0 7 656 1 650
ART20128.1 0.0 1 656 1 656
AMO88993.1 0.0 1 656 3 658

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8NTW4 3.26e-230 20 655 15 660
Galactan 5-O-arabinofuranosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=aftA PE=1 SV=1
A0R611 1.24e-120 36 655 16 614
Galactan 5-O-arabinofuranosyltransferase OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=aftA PE=3 SV=1
P9WN02 3.26e-107 32 655 29 638
Galactan 5-O-arabinofuranosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=aftA PE=3 SV=1
P9WN03 3.26e-107 32 655 29 638
Galactan 5-O-arabinofuranosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=aftA PE=1 SV=1
Q7TVN5 3.26e-107 32 655 29 638
Galactan 5-O-arabinofuranosyltransferase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=aftA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000023 0.000028 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
30 52
67 89
102 124
191 210
215 237
281 303
310 332
355 377
389 411
421 438
459 478