dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000003556_01555

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Species

Alistipes sp900769745

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes sp900769745

CAZyme ID

MGYG000003556_01555

CAZy Family

GH29

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
482		54297.32	5.5354

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003556	2131277	MAG	Fiji	Oceania

Gene Location

Start: 26893; End: 28341 Strand: +

EC	3.2.1.111	3.2.1.51

Family	Start	End	Evalue	family coverage
GH29	36	349	9.7e-84	0.861271676300578

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3669	AfuC	3.01e-68	29	482	3	430	Alpha-L-fucosidase [Carbohydrate transport and metabolism].
pfam01120	Alpha_L_fucos	2.03e-48	64	345	69	321	Alpha-L-fucosidase.
smart00812	Alpha_L_fucos	1.73e-42	64	347	66	325	Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
SOE20179.1	6.00e-189	30	482	55	509
AXE20758.1	3.67e-187	30	482	350	806
AEI46547.1	8.33e-186	30	482	350	806
AEW03491.1	1.14e-183	26	482	27	487
BBE17422.1	2.14e-183	25	482	22	485

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5K9H_A	2.73e-138	31	482	33	463	Crystalstructure of a glycoside hydrolase 29 family member from an unknown rumen bacterium [unidentified]
4ZRX_A	7.59e-116	35	482	30	458	Crystalstructure of a putative alpha-L-fucosidase (BACOVA_04357) from Bacteroides ovatus ATCC 8483 at 1.59 A resolution [Bacteroides ovatus ATCC 8483]
6ORG_A	1.56e-104	31	482	5	448	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORG_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
6OR4_A	2.40e-103	31	482	5	448	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6OR4_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_A Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
6ORF_A	2.47e-103	31	482	5	448	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORF_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q8GW72	1.75e-108	30	482	31	477	Alpha-L-fucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=FUC1 PE=1 SV=2
Q7XUR3	9.88e-98	30	482	33	476	Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560400 PE=3 SV=2
Q9BTY2	5.95e-14	67	348	100	359	Plasma alpha-L-fucosidase OS=Homo sapiens OX=9606 GN=FUCA2 PE=1 SV=2
Q5RFI5	1.85e-13	67	348	98	357	Plasma alpha-L-fucosidase OS=Pongo abelii OX=9601 GN=FUCA2 PE=2 SV=1
P49713	6.09e-13	75	338	92	328	Putative alpha-L-fucosidase OS=Caenorhabditis elegans OX=6239 GN=W03G11.3 PE=3 SV=2

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000005	0.000058	0.999977	0.000000	0.000000	0.000000

There is no transmembrane helices in MGYG000003556_01555.