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CAZyme Information: MGYG000003575_00508

You are here: Home > Sequence: MGYG000003575_00508

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Treponema_D sp900770075
Lineage Bacteria; Spirochaetota; Spirochaetia; Treponematales; Treponemataceae; Treponema_D; Treponema_D sp900770075
CAZyme ID MGYG000003575_00508
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
585 62870.94 5.5499
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003575 2346376 MAG Fiji Oceania
Gene Location Start: 60;  End: 1817  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003575_00508.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 172 547 8e-113 0.9573333333333334

CDD Domains      help

MGYG000003575_00508 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QSI01361.1 7.43e-261 1 576 424 996
AEE17572.1 6.22e-186 1 575 440 988
AEJ18793.1 1.53e-166 1 575 440 985
QSI03342.1 1.97e-165 1 563 414 942
BCJ94249.1 9.98e-108 2 573 647 1190

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 1.57e-26 176 503 18 342
ChainA, Pectate lyase [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P22751 1.05e-41 13 442 255 629
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P0C1A6 1.95e-26 176 503 43 367
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 1.18e-25 176 503 43 367
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000055 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003575_00508.