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CAZyme Information: MGYG000003826_01034
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UMGS1601; | |||||||||||
| CAZyme ID | MGYG000003826_01034 | |||||||||||
| CAZy Family | GH10 | |||||||||||
| CAZyme Description | Endo-1,4-beta-xylanase B | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 17020; End: 17979 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 4 | 318 | 7e-98 | 0.9900990099009901 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00331 | Glyco_hydro_10 | 1.20e-107 | 4 | 318 | 1 | 310 | Glycosyl hydrolase family 10. |
| smart00633 | Glyco_10 | 7.54e-94 | 43 | 316 | 1 | 263 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 5.58e-78 | 28 | 319 | 52 | 340 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AZP05644.1 | 2.77e-103 | 3 | 319 | 2 | 326 |
| ACW01951.1 | 5.85e-102 | 4 | 319 | 13 | 336 |
| ACP87323.1 | 5.85e-102 | 4 | 319 | 13 | 336 |
| ACW01926.1 | 1.17e-101 | 3 | 319 | 12 | 336 |
| ACP87298.1 | 1.17e-101 | 3 | 319 | 12 | 336 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1N82_A | 2.81e-92 | 3 | 314 | 7 | 326 | Thehigh-resolution crystal structure of IXT6, a thermophilic, intracellular xylanase from G. stearothermophilus [Geobacillus stearothermophilus],1N82_B The high-resolution crystal structure of IXT6, a thermophilic, intracellular xylanase from G. stearothermophilus [Geobacillus stearothermophilus],3MUA_A Enzyme-Substrate interactions of IXT6, the intracellular xylanase of G. stearothermophilus. [Geobacillus stearothermophilus],3MUA_B Enzyme-Substrate interactions of IXT6, the intracellular xylanase of G. stearothermophilus. [Geobacillus stearothermophilus] |
| 6WQW_A | 1.24e-91 | 4 | 316 | 6 | 326 | ChainA, Beta-xylanase [Thermobacillus composti] |
| 2Q8X_A | 1.60e-91 | 3 | 314 | 7 | 326 | Thehigh-resolution crystal structure of ixt6, a thermophilic, intracellular xylanase from G. stearothermophilus [unidentified],2Q8X_B The high-resolution crystal structure of ixt6, a thermophilic, intracellular xylanase from G. stearothermophilus [unidentified],3MSD_A Enzyme-Substrate interactions of IXT6, the intracellular xylanase of G. stearothermophilus. [Geobacillus stearothermophilus],3MSD_B Enzyme-Substrate interactions of IXT6, the intracellular xylanase of G. stearothermophilus. [Geobacillus stearothermophilus],3MSG_A Enzyme-Substrate interactions of IXT6, the intracellular xylanase of G. stearothermophilus. [Geobacillus stearothermophilus],3MSG_B Enzyme-Substrate interactions of IXT6, the intracellular xylanase of G. stearothermophilus. [Geobacillus stearothermophilus] |
| 4L4O_A | 1.75e-91 | 3 | 319 | 12 | 337 | Thecrystal structure of CbXyn10B in native form [Caldicellulosiruptor bescii DSM 6725] |
| 3MUI_A | 2.26e-91 | 3 | 314 | 7 | 326 | Enzyme-Substrateinteractions of IXT6, the intracellular xylanase of G. stearothermophilus. [Geobacillus stearothermophilus],3MUI_B Enzyme-Substrate interactions of IXT6, the intracellular xylanase of G. stearothermophilus. [Geobacillus stearothermophilus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P23556 | 2.48e-90 | 3 | 319 | 16 | 342 | Endo-1,4-beta-xylanase A OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=xynA PE=1 SV=1 |
| Q12603 | 7.73e-89 | 3 | 319 | 34 | 352 | Beta-1,4-xylanase OS=Dictyoglomus thermophilum OX=14 GN=xynA PE=3 SV=1 |
| P45703 | 3.12e-88 | 3 | 318 | 7 | 329 | Endo-1,4-beta-xylanase OS=Geobacillus stearothermophilus OX=1422 GN=xynA PE=1 SV=1 |
| O69231 | 4.71e-88 | 3 | 316 | 7 | 328 | Endo-1,4-beta-xylanase B OS=Paenibacillus barcinonensis OX=198119 GN=xynB PE=1 SV=1 |
| P07528 | 4.09e-67 | 3 | 318 | 56 | 396 | Endo-1,4-beta-xylanase A OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=xynA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000054 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |