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CAZyme Information: MGYG000003874_01028

You are here: Home > Sequence: MGYG000003874_01028

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Merdibacter sp900759455
Lineage Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelotrichaceae; Merdibacter; Merdibacter sp900759455
CAZyme ID MGYG000003874_01028
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1803 MGYG000003874_12|CGC1 197721.06 4.0488
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003874 1971751 MAG United States North America
Gene Location Start: 46007;  End: 51418  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003874_01028.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM32 1403 1516 2.4e-18 0.8064516129032258

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 2.68e-15 1397 1524 1 122
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754 F5_F8_type_C 1.93e-07 296 421 3 111
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 3.20e-07 1390 1507 6 121
Substituted updates: Jan 31, 2002
pfam00754 F5_F8_type_C 9.78e-07 135 260 15 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
COG1566 EmrA 5.21e-05 1591 1718 82 208
Multidrug resistance efflux pump [Defense mechanisms].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SQG39183.1 0.0 280 1675 107 1490
AQW23840.1 0.0 280 1675 107 1490
AMN35790.1 0.0 280 1675 107 1490
AOY54034.1 0.0 280 1675 107 1490
ATD48595.1 0.0 280 1675 107 1490

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2V72_A 1.82e-14 1393 1530 13 142
Thestructure of the family 32 CBM from C. perfringens NanJ in complex with galactose [Clostridium perfringens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0DTR4 2.00e-10 1393 1530 511 644
A type blood N-acetyl-alpha-D-galactosamine deacetylase OS=Flavonifractor plautii OX=292800 PE=1 SV=1
P29767 5.88e-07 1414 1519 70 169
Sialidase OS=Clostridium septicum OX=1504 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000326 0.998839 0.000251 0.000200 0.000190 0.000172

TMHMM  Annotations      download full data without filtering help

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