logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003912_00676

You are here: Home > Sequence: MGYG000003912_00676

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp000435635
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp000435635
CAZyme ID MGYG000003912_00676
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
587 63968.62 4.6473
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003912 2374877 MAG China Asia
Gene Location Start: 160479;  End: 162242  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003912_00676.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 74 279 4.4e-71 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 5.48e-04 36 252 49 276
Pectate lyase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT67774.1 1.80e-244 23 587 5 586
VEH16322.1 3.71e-224 23 539 28 539
AGB28243.1 4.75e-224 3 528 4 525
QCD40778.1 1.01e-209 4 586 2 596
QCP73827.1 1.01e-209 4 586 2 596

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 1.11e-44 24 508 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
B0XMA2 1.09e-43 8 508 7 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 2.85e-43 8 508 7 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
A1DPF0 1.43e-42 8 508 7 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q2UB83 2.65e-42 24 508 22 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000200 0.999214 0.000151 0.000136 0.000136 0.000126

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003912_00676.