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CAZyme Information: MGYG000003933_01303

You are here: Home > Sequence: MGYG000003933_01303

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Desulfovibrio desulfuricans
Lineage Bacteria; Desulfobacterota; Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio; Desulfovibrio desulfuricans
CAZyme ID MGYG000003933_01303
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
428 45391.16 10.0558
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003933 3387322 MAG United Kingdom Europe
Gene Location Start: 31334;  End: 32620  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003933_01303.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 140 362 5.2e-52 0.9537037037037037

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1472 BglX 2.64e-76 70 405 2 311
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 4.77e-72 70 405 1 316
Glycosyl hydrolase family 3 N terminal domain.
PRK05337 PRK05337 1.50e-54 77 401 2 324
beta-hexosaminidase; Provisional
PRK15098 PRK15098 2.10e-09 33 395 4 342
beta-glucosidase BglX.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QTO41863.1 6.71e-250 74 428 1 355
QCC86050.1 2.40e-230 54 428 13 387
AMD90486.1 3.19e-172 69 408 47 386
AAS96712.1 1.89e-114 60 405 45 390
ABM28024.1 1.89e-114 60 405 45 390

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6K5J_A 6.39e-51 75 421 17 352
Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
4ZM6_A 4.58e-48 71 405 9 336
Aunique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432],4ZM6_B A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432]
3BMX_A 2.03e-47 70 405 43 392
Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A 7.44e-47 70 405 17 366
ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A 1.08e-46 70 405 47 396
Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40406 1.11e-46 70 405 43 392
Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823 1.47e-43 74 405 21 379
Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
B2FPW9 2.03e-38 78 373 1 287
Beta-hexosaminidase OS=Stenotrophomonas maltophilia (strain K279a) OX=522373 GN=nagZ PE=3 SV=1
L7N6B0 3.20e-38 75 405 65 379
Beta-hexosaminidase LpqI OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=lpqI PE=1 SV=1
B4SRK3 3.94e-38 78 373 1 287
Beta-hexosaminidase OS=Stenotrophomonas maltophilia (strain R551-3) OX=391008 GN=nagZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.775559 0.174983 0.044502 0.001662 0.001426 0.001861

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003933_01303.