logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003949_02304

You are here: Home > Sequence: MGYG000003949_02304

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_F sp900539115
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eubacterium_F; Eubacterium_F sp900539115
CAZyme ID MGYG000003949_02304
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
572 64436.31 5.0332
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003949 2807569 MAG United Kingdom Europe
Gene Location Start: 2671;  End: 4389  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003949_02304.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 294 561 1.2e-37 0.7905405405405406

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 2.26e-66 276 567 16 313
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
cd06549 GH18_trifunctional 2.19e-37 262 564 3 298
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
COG3858 YaaH 1.81e-36 283 568 124 419
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
pfam00704 Glyco_hydro_18 1.78e-24 294 558 41 306
Glycosyl hydrolases family 18.
smart00636 Glyco_18 3.35e-23 300 557 51 332
Glyco_18 domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBF44731.1 1.95e-144 2 572 4 566
BCJ96722.1 2.93e-144 1 571 1 567
QHQ60083.1 3.06e-138 67 572 3 503
BCJ97263.1 1.70e-137 2 571 3 567
BCN32821.1 3.29e-137 2 571 3 565

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CZ8_A 9.69e-16 337 556 88 308
ChainA, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168],3CZ8_B Chain B, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168]
4S3K_A 4.08e-12 336 572 188 428
ChainA, Spore germination protein YaaH [Priestia megaterium QM B1551]
6INX_A 5.69e-07 345 560 87 330
Structuralinsights into a novel glycoside hydrolase family 18 N-acetylglucosaminidase from Paenibacillus barengoltzii [Paenibacillus barengoltzii]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O32258 6.05e-24 286 572 52 344
Uncharacterized glycosylase YvbX OS=Bacillus subtilis (strain 168) OX=224308 GN=yvbX PE=3 SV=1
P37531 1.74e-18 338 568 186 420
Cortical fragment-lytic enzyme OS=Bacillus subtilis (strain 168) OX=224308 GN=sleL PE=1 SV=2
O05495 3.96e-15 337 556 180 400
Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) OX=224308 GN=ydhD PE=1 SV=2
O31682 1.35e-13 284 479 24 217
Putative glycosylase YkvQ OS=Bacillus subtilis (strain 168) OX=224308 GN=ykvQ PE=3 SV=1
Q8T293 4.71e-06 303 558 69 354
Probable di-N-acetylchitobiase 2 OS=Dictyostelium discoideum OX=44689 GN=ctbs2 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.835841 0.151002 0.003476 0.001455 0.000706 0.007529

TMHMM  Annotations      download full data without filtering help

start end
7 26