CAZyme Information: MGYG000004334_01625

Basic Information

• Species: Ruminococcus_E sp002493635
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Ruminococcus_E; Ruminococcus_E sp002493635
• CAZyme ID: MGYG000004334_01625
• CAZy Family: CBM50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
2099		235274.16	4.6174

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004334	2103818	MAG	Israel	Asia

• Gene Location: Start: 9114; End: 15413 Strand: +

Full Sequence      

MTGKIKKLLSSVSLVLCILTAFLLPTQVAAQEIPQEENINETTSTVSQEAEDYQIGNIVS
EITEERDEYSKQFRLDDGTYMAVSYNQPIHYKNDDGEWVEYNNSLIDASESTATDDEVSA
YSEDYAGEYTNQSSNIKVNYSKKSKENNMIKVNANDYSISWGYKNTNKVNATVVSNDEKL
EGNDKYTVLKNQISEIIYENIYNNVDIQYFTTSVGVKENIILKNANAQNEFSIQYKFNKL
TAESVNDRLIELKDKSGNVVYSIEAPYMVDAKGRTSNQLCMSIAEQKNGKLTVKLTADKD
FLSSSDCQYPVTIDPEFYTTQEWQQAECSFVDSYHPNTSYGFGSDTGYTGTVNVGTFGSG
MYRTYYKIKTLPKLNKGDMIVGAYFNLWLCNENFYTDMNVSAYFVNESWTQSTINWNNQP
DFDSNIVDYEIFNSNTKMSFYDWDITSCMKKWYNGKANYGIMLKDSDENSAVQCATFASA
NYPDELYTRPLFTIVYQNNNGLEDYWTYSSFSVGTAGTAHVNDYSGNLVFINSGPSTASG
YAPASIQHVYNGYMASVRYNKTSPFVGHGWKLNIQKTLLTSDKYGLTGEAKTKYPYVYTD
EDGTEHYFYKKTESGKTKYLDEDGLGLELTIGDSNSEKYTVKNDKDNLMIFNSNGLLNYT
QDSNGNKTTVHYCSSDNTIIDYITDGSGNKLTFEHNTSSYYLKNISDPAGRKTIYYYDEG
MLTKIVYPNGASVQYTYDSDEALSTVTDVDGYKVKFSYSSTSSGKKVTAIQEYGSNGTAG
QKITFDRTKYNTTVIKTYGADGISGTDDDLTSTYQFDNYGRTKSVKSETTSADLGASVYT
HTDGKINSTESNIKQINKVRSKYSTGSNAVNLITNSNMETSGSWTSAAWGDSVNFTSKFD
TSEHYFGKQSRSITVTSYQGDSRGRVYQDLSSSVLVPGKTYTLSAYIKTKNIQNTSEYGG
AYLWADSSNSDGTWTKFYSDYVYGNTDASIDNGWQRVSVTFTVPTNSQMTRINLALAGET
GTAYFDGLQVESYLNVNDYNMLENSGLEKYSSNGLPTGWFDENSNLSTSSDAKSTAHREG
SYSFKISGDSGKTKGLAQTVKVSGSENDTYIVSGWAKANAVPKDEDDKRKFKISIKITYS
SGEPVWKTPAEFNYSISDWQYTSAAFTLSDENSSTTRTPVSITICLRYHNQANTAYFDNI
CLEKDNAQSYTYDKDGKLTSVVDNSQKQSTMEYTNSDLTKSIDAKGYAYEYEYDNHHNVE
KAKSQNGVTYNYSYDKGLATSLKVTGNNVKSLKTEVTYDDNGLLATSKDTDGNIASYIYN
SKTGTLTSATDDSGTTSYEYDSKTDKMIGISKTDEEEDKTYSIGYNYSSDSKYLKSISHN
GTSYNIEYNQYGNKIDSKVGTQSLTKHTYNPTNGALNTITYGTGQKTSYGYDVFGNIKFL
KYNGNTAFNFYTDRNGNITREVDSINDIQYNSVFDTTGRIVRTTANSTTAASNKKFLFST
EYGYDLNNNITKLINKTPNATITNNYTYGKDNLLTKYKMTSGYIANYTYDGLNRLTKVSV
DTNSPIDTSYTYYKSAIGDDYTTNLLEAETIGGVTYEYSYDTLGNITDIYRKDGDKLKTL
YQYEYDAMNQLTYVSDFENRKIYNYTYDNAGNIISEVVRNTNSNGIPISTTNNSYTYGDS
NWTDKLTAYNGQAITYDAIGNPLSYRDGIAMTWKNGRELDTFTDGTTNVSYSYDSNSVRV
SKAVDGVKYTYEYLNGKLLYETRGEAKFWYSYDSNGILYNIRYTLSDDGTMMSYYCTHNS
RGDIIGIYNGDGILRAQYKYDAWGNVLSVTDESGNAITSATHVGNLNPFRYRGYYYDTES
GFYYLMSRYYDPVTHRFINADGCFQTSNIILDANTFAYCRNNPIMFADPTGEHSSSITCG
DPTCTQCRPERREFINKHVDWYNKVTGKNIGGVSYDGEFWSYQVYETDKTLLEYKVIHSI
SAFVTSFEITGDVGLGFGAKDDIYGIILGAESKTALQAELSGHDGFEIGTYSGNKFSAAF
WDFEMSSFKSINSEEYSANVGIQPNINLLGASYYVGVGASYGVSFDYGYFLDQLNETWG

Enzyme Prediction     

No EC number prediction in MGYG000004334_01625.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
TIGR03696	Rhs_assc_core	5.36e-20	1820	1911	1	76	RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.
COG3209	RhsA	1.64e-17	1203	1911	31	659	Uncharacterized conserved protein RhsA, contains 28 RHS repeats [General function prediction only].
NF033679	DNRLRE_dom	2.26e-17	330	495	4	164	DNRLRE domain. The DNRLRE domain, with a length of about 160 amino acids, appears typically in large, repetitive surface proteins of bacteria and archaea, sometimes repeated several times. It occurs, notably, three times in the C-terminal region of the enzyme disaggregatase from the archaeal species Methanosarcina mazei, each time with the motif DNRLRE, for which the domain is named. Archaeal proteins within this family are described particularly well by the currently more narrowly defined Pfam model, PF06848. Note that the catalytic region of disaggregatase, in the N-terminal portion of the protein, is modeled by a different HMM, PF08480.
pfam02018	CBM_4_9	7.75e-05	1040	1170	2	119	Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.
COG3209	RhsA	6.79e-04	652	1422	41	758	Uncharacterized conserved protein RhsA, contains 28 RHS repeats [General function prediction only].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ARD64149.1	2.17e-188	58	1918	40	2190
QNM08600.1	3.20e-184	183	1911	334	2308
QRT48460.1	3.86e-108	58	1293	5	1253
QEI31369.1	2.70e-101	58	1249	5	1192
QHB23864.1	2.70e-101	58	1249	5	1192

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7PQ5_L	6.09e-06	1206	1409	680	854	ChainL, Tre23 [Photorhabdus laumondii subsp. laumondii TTO1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
G4NYJ6	8.51e-27	1625	1911	1919	2186	tRNA3(Ser)-specific nuclease WapA OS=Bacillus spizizenii (strain DSM 15029 / JCM 12233 / NBRC 101239 / NRRL B-23049 / TU-B-10) OX=1052585 GN=wapA PE=1 SV=1
Q07833	1.64e-25	61	505	73	498	tRNA nuclease WapA OS=Bacillus subtilis (strain 168) OX=224308 GN=wapA PE=1 SV=2
D4G3R4	6.33e-25	61	505	86	511	tRNA(Glu)-specific nuclease WapA OS=Bacillus subtilis subsp. natto (strain BEST195) OX=645657 GN=wapA PE=1 SV=2
P16917	6.56e-06	1794	1950	1146	1294	Protein RhsB OS=Escherichia coli (strain K12) OX=83333 GN=rhsB PE=3 SV=4

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000307	0.998977	0.000209	0.000162	0.000155	0.000146

TMHMM  Annotations     

start	end
7	29