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CAZyme Information: MGYG000004469_01472

You are here: Home > Sequence: MGYG000004469_01472

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes_A sp900545315
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes_A; Alistipes_A sp900545315
CAZyme ID MGYG000004469_01472
CAZy Family PL35
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
675 77444.06 5.2463
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004469 2457179 MAG Israel Asia
Gene Location Start: 36940;  End: 38967  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004469_01472.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL35 412 582 5.8e-20 0.9273743016759777

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 2.39e-10 386 579 2 187
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCG53777.1 3.78e-283 17 675 53 712
BCG54451.1 5.14e-246 15 675 35 712
QEH43197.1 1.46e-33 169 566 132 531
ASV75008.1 1.01e-28 14 638 34 608
QYY35244.1 1.61e-27 134 633 126 637

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3A0O_A 6.03e-13 177 558 259 660
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 9.49e-12 177 558 259 660
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000291 0.999025 0.000243 0.000157 0.000145 0.000138

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004469_01472.