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CAZyme Information: MGYG000004547_01128

You are here: Home > Sequence: MGYG000004547_01128

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; ;
CAZyme ID MGYG000004547_01128
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
527 MGYG000004547_49|CGC1 59652.34 7.257
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004547 2604006 MAG France Europe
Gene Location Start: 13184;  End: 14767  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.2

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 188 480 6.1e-103 0.9965277777777778

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09492 Pec_lyase 4.53e-134 188 481 1 289
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
TIGR02474 pec_lyase 4.63e-118 188 481 1 290
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNF26751.1 1.17e-127 81 516 360 798
AFK65389.1 1.25e-115 81 516 39 482
AFH63929.1 1.25e-115 81 516 39 482
AFC31582.1 4.93e-115 81 516 39 482
AEI44001.1 6.96e-115 81 516 39 482

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1GXM_A 1.08e-71 177 494 33 329
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 1.64e-70 177 494 33 329
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]
1R76_A 8.54e-49 181 487 87 404
ChainA, pectate lyase [Niveispirillum irakense]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000237 0.999098 0.000198 0.000166 0.000150 0.000135

TMHMM  Annotations      download full data without filtering help

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