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CAZyme Information: MGYG000004572_01452

You are here: Home > Sequence: MGYG000004572_01452

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium_B;
CAZyme ID MGYG000004572_01452
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1013 105934.5 3.933
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004572 2070764 MAG France Europe
Gene Location Start: 430;  End: 3471  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004572_01452.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 279 392 5e-20 0.9453125

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 8.49e-28 224 402 50 236
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam01832 Glucosaminidase 1.11e-13 278 344 1 77
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
smart00047 LYZ2 6.28e-12 263 396 2 141
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
COG1705 FlgJ 1.70e-06 283 405 56 195
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
pfam05297 Herpes_LMP1 4.07e-05 850 948 269 379
Herpesvirus latent membrane protein 1 (LMP1). This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus. LMP1 of EBV is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N-terminus and a long cytoplasmic carboxy tail of 200 amino acids. EBV latent membrane protein 1 (LMP1) is essential for EBV-mediated transformation and has been associated with several cases of malignancies. EBV-like viruses in Cynomolgus monkeys (Macaca fascicularis) have been associated with high lymphoma rates in immunosuppressed monkeys

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QEK17141.1 6.66e-258 2 862 3 859
AWY97555.1 1.59e-188 1 709 1 717
QOV20091.1 5.41e-129 48 497 40 477
QQV05342.1 9.00e-107 23 499 69 539
QPS13527.1 1.15e-101 53 557 76 568

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q2W_A 4.88e-31 108 402 31 290
CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P59205 5.01e-29 108 402 399 658
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=lytB PE=1 SV=1
P59206 6.26e-29 108 402 443 702
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=lytB PE=1 SV=1
P39848 9.60e-06 232 394 694 863
Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.006041 0.700547 0.291786 0.000909 0.000407 0.000294

TMHMM  Annotations      download full data without filtering help

start end
986 1008