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CAZyme Information: MGYG000004634_00021

You are here: Home > Sequence: MGYG000004634_00021

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; UMGS1441;
CAZyme ID MGYG000004634_00021
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1907 MGYG000004634_1|CGC1 202884.9 4.1684
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004634 2025534 MAG Germany Europe
Gene Location Start: 22732;  End: 28455  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.-.-.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 521 831 1.2e-56 0.8645833333333334
CE12 997 1245 8e-51 0.9857142857142858

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd01821 Rhamnogalacturan_acetylesterase_like 1.52e-46 997 1246 3 198
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
PLN02773 PLN02773 4.06e-26 524 812 16 246
pectinesterase
PLN02432 PLN02432 2.32e-24 524 844 22 266
putative pectinesterase
PLN02682 PLN02682 3.71e-24 514 812 71 311
pectinesterase family protein
pfam01095 Pectinesterase 6.69e-24 524 845 11 273
Pectinesterase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADD61757.1 0.0 63 1314 25 1292
QAV09174.1 4.61e-275 63 1317 44 1329
QSI02582.1 8.61e-245 63 1282 31 1255
ADL52345.1 1.36e-185 1 938 12 929
BAV13168.1 1.78e-185 1 938 28 945

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5C1C_A 3.39e-19 520 843 14 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
5C1E_A 4.57e-19 520 843 14 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
3UW0_A 3.95e-18 506 817 25 308
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
2NSP_A 1.06e-15 525 831 18 292
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
4PMH_A 1.06e-11 503 829 31 339
Thestructure of rice weevil pectin methyl esterase [Sitophilus oryzae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O31528 7.56e-22 997 1197 5 164
Probable rhamnogalacturonan acetylesterase YesY OS=Bacillus subtilis (strain 168) OX=224308 GN=yesY PE=1 SV=1
A1DBT4 1.92e-19 676 843 142 296
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
A2QK82 2.19e-18 520 843 42 299
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1
B0Y9F9 5.09e-18 676 843 142 296
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
Q4WBT5 5.09e-18 676 843 142 296
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000294 0.999023 0.000173 0.000180 0.000157 0.000142

TMHMM  Annotations      download full data without filtering help

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